Lcy06g007310 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy06g007310
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	Pentatricopeptide repeat-containing protein
Location	Chr06: 7119525 .. 7121929 (-)
RNA-Seq Expression	Lcy06g007310
Synteny	Lcy06g007310

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTGCGTTCTTGGTTCCAACTTTCCAGTTTTCATCTTGTTCCTTCGAAGGCGAGCCTCTGCAGACCGCATCTATGGATCACAAGCTCTTCTCCAAAGCCTTAACACGCTATGCCATAGCTGGCCGATCTTACCACACGAATCGGTTGAAAAAGGCGACTCTATATGCGAAAATTAGTCCACTGGGCGATCCTAGCATCAGCGTGGAGCCAGAACTCGACGGCTGGGTTCAGGAGGGGAAGAAGGTCCGAGTCGCCGAGCTTCAGAGAATCATTCACGACCTTCGCAAGCGCAAGCGTTTTACCCAAGCTCTTGAGGTTTGAATTCTTCGTTCTTGAAATGTGCTTTGTTTTGGTAGTAAGATGTGGAGGAAGAAGTGAACTATACTAAATGATGCATCGAGTGAGAACTTAGTGTCTTTTGGACGAGCCTCACTTACGAACTGTGCGTAGCCTAATCGCTAATTCCAAATCTCAGAAATTAGGGAGAATGAGGTTGTAGCAATAGATTTAGCTGGGGGAAATGGAAGGTATTCGTTTCCACGTTAAGAAGTCAGAAGATATTTCCTTAGGTTCTTTGATTGAGTGGATTTTTTTGAGTGAGTTCATTAGTTCAGAGAATATGGACTTTCAGCTGTGGAAATATGTCCTTTCTCCCTTATTTAATATGGAGTATGATTTCACTTGTTAAGAATTCAACTCTTTGTGAATAATGATAGAATGACTGAAACATTATATGACCTATAATATGTGGATTTGAAAGCATTGTTGAAGTTTTTTGTAAGATGATGGGTATAAATGCAGGTTTCCGAATGGATGAAGAAAAACGGTGTCTGCATATTTTCAGCCAGCGAGCATGCGGTGCAATTGGATCTGATTGGCCGAGTACGTGGATATCTTTCAGCCGAAAGCTATTTCAATCAGTTGAAGGAGCAAGACCAGACTGATAAGACATATGGTGCACTCCTGAATTGCTACGTTCGGCAGCGGCAAGTTGACAAATCCCTCTCGCATTTGCAAAAAATGAAAGAGATGGGTTTTGCAACTTCGGAACTCACTTACAATGACATCATGTGCTTGTATACTAATGTTGGCCAGCATGAAAAGGTCCCTGAGGTGCTAGCAGAGATGAAGGAGAAAAATGTTTCTCCGGACAACTTCAGCTACAGAATCTGCATCAATTCGTACGGTGCTAGACGTGATCTGGAGGGGATGGAGAATGTGTTAAAGGAGATGGAATCCCAACCTCATATTGTTATGGACTGGAACACTTATGCAGTAGTTGCTAACTTTTTTATAAAAGCGGGTCTTACTGATAAGGCAGTTGATGCTTTGAGTAAATCAGAAGAGAGGCTGAAGAGTAAAGACAGAATTGGCCATAACCATCTAATCTCACTTTATGCGACCTTAGGAAACAAGGAGAAGGTGTTGAGATTGTGGAATTTGGATAAAAGTGATTCTACGAGATTCATCAATAGGGACTACATCACTATGCTCGAGTCACTGGTGAGACTGAGTGAACTTGAAGAAGCTGAAAAAGTGCTGAAAGAGTGGGAATCATCTGGGAATTGCTATGATTTTCGAGTTCCTAACACTGTCATTGTTGGCTATATTGACAAGGGAATGTGTGAGAGAGCCGAAGCCCTGCTTGAAGACTTGATGGAGAAGGGAAAGGCTACCACACCAAACAGTTGGGGTGCTGTGGCTGTTCAATATCTGGACAGGGGTGAGACTGAAAAAGCTGTAGAGTGCATGAAGGCAGCCCTTTCTCTAAATATGGATAAAGGATGGAAGCCTAATCTTCGTGTGATCACGGGCATATTGAATTGGCTTGGTGATAAGGGCAGCATTGAAGAAGTAGAAGCTTTTGTAGGCTCATTGAGGTCTGTCATTCCAGTGAACAGAGAGATGTATCATGCCTTGATGAAGGCTCATATAAGAGGTGGTAAAGAAGTTCACGAGTTGTTAAATCAAATGAAGTCTGACAAAATAGATGAAGATGAAGAAACAAAGAAAATTCTTGGCACTTGGCAAGGAACAACCGAAGGTAAGAACATTTGCTGATTGTTATCTTACTGTATCACATTATTGATGTTGTCCATCAGCCAAACGCATGTTGCATGGGCTTCAATAATGCAAAATCTTATTTATCAAATTCTTCGCATGAAAGGAGTAAAAGTAGTTGATGTCACTTCCAAGTTTGCTGCTCTTGTCTTGCTGTACTACGTTTTTGGTTTTACTTTGGTGGGTTAATGAAGTGCTGGTGAATTGAGAGAGCTGTCTTGTTGCGTACAGCGATGACTTGGTATTTTATGAACAGAGGAAACAAAGTTTAAATGGTGAATTCAATTAAGATAAATTAAGAAAAAAATTACTATCTTGCATCAAGATTACGTTGAGCCTGTGTG

mRNA sequence

GTTGCGTTCTTGGTTCCAACTTTCCAGTTTTCATCTTGTTCCTTCGAAGGCGAGCCTCTGCAGACCGCATCTATGGATCACAAGCTCTTCTCCAAAGCCTTAACACGCTATGCCATAGCTGGCCGATCTTACCACACGAATCGGTTGAAAAAGGCGACTCTATATGCGAAAATTAGTCCACTGGGCGATCCTAGCATCAGCGTGGAGCCAGAACTCGACGGCTGGGTTCAGGAGGGGAAGAAGGTCCGAGTCGCCGAGCTTCAGAGAATCATTCACGACCTTCGCAAGCGCAAGCGTTTTACCCAAGCTCTTGAGGTTTCCGAATGGATGAAGAAAAACGGTGTCTGCATATTTTCAGCCAGCGAGCATGCGGTGCAATTGGATCTGATTGGCCGAGTACGTGGATATCTTTCAGCCGAAAGCTATTTCAATCAGTTGAAGGAGCAAGACCAGACTGATAAGACATATGGTGCACTCCTGAATTGCTACGTTCGGCAGCGGCAAGTTGACAAATCCCTCTCGCATTTGCAAAAAATGAAAGAGATGGGTTTTGCAACTTCGGAACTCACTTACAATGACATCATGTGCTTGTATACTAATGTTGGCCAGCATGAAAAGGTCCCTGAGGTGCTAGCAGAGATGAAGGAGAAAAATGTTTCTCCGGACAACTTCAGCTACAGAATCTGCATCAATTCGTACGGTGCTAGACGTGATCTGGAGGGGATGGAGAATGTGTTAAAGGAGATGGAATCCCAACCTCATATTGTTATGGACTGGAACACTTATGCAGTAGTTGCTAACTTTTTTATAAAAGCGGGTCTTACTGATAAGGCAGTTGATGCTTTGAGTAAATCAGAAGAGAGGCTGAAGAGTAAAGACAGAATTGGCCATAACCATCTAATCTCACTTTATGCGACCTTAGGAAACAAGGAGAAGGTGTTGAGATTGTGGAATTTGGATAAAAGTGATTCTACGAGATTCATCAATAGGGACTACATCACTATGCTCGAGTCACTGGTGAGACTGAGTGAACTTGAAGAAGCTGAAAAAGTGCTGAAAGAGTGGGAATCATCTGGGAATTGCTATGATTTTCGAGTTCCTAACACTGTCATTGTTGGCTATATTGACAAGGGAATGTGTGAGAGAGCCGAAGCCCTGCTTGAAGACTTGATGGAGAAGGGAAAGGCTACCACACCAAACAGTTGGGGTGCTGTGGCTGTTCAATATCTGGACAGGGGTGAGACTGAAAAAGCTGTAGAGTGCATGAAGGCAGCCCTTTCTCTAAATATGGATAAAGGATGGAAGCCTAATCTTCGTGTGATCACGGGCATATTGAATTGGCTTGGTGATAAGGGCAGCATTGAAGAAGTAGAAGCTTTTGTAGGCTCATTGAGGTCTGTCATTCCAGTGAACAGAGAGATGTATCATGCCTTGATGAAGGCTCATATAAGAGGTGGTAAAGAAGTTCACGAGTTGTTAAATCAAATGAAGTCTGACAAAATAGATGAAGATGAAGAAACAAAGAAAATTCTTGGCACTTGGCAAGGAACAACCGAAGGTAAGAACATTTGCTGATTGTTATCTTACTGTATCACATTATTGATGTTGTCCATCAGCCAAACGCATGTTGCATGGGCTTCAATAATGCAAAATCTTATTTATCAAATTCTTCGCATGAAAGGAGTAAAAGTAGTTGATGTCACTTCCAAGTTTGCTGCTCTTGTCTTGCTGTACTACGTTTTTGGTTTTACTTTGGTGGGTTAATGAAGTGCTGGTGAATTGAGAGAGCTGTCTTGTTGCGTACAGCGATGACTTGGTATTTTATGAACAGAGGAAACAAAGTTTAAATGGTGAATTCAATTAAGATAAATTAAGAAAAAAATTACTATCTTGCATCAAGATTACGTTGAGCCTGTGTG

Coding sequence (CDS)

ATGGATCACAAGCTCTTCTCCAAAGCCTTAACACGCTATGCCATAGCTGGCCGATCTTACCACACGAATCGGTTGAAAAAGGCGACTCTATATGCGAAAATTAGTCCACTGGGCGATCCTAGCATCAGCGTGGAGCCAGAACTCGACGGCTGGGTTCAGGAGGGGAAGAAGGTCCGAGTCGCCGAGCTTCAGAGAATCATTCACGACCTTCGCAAGCGCAAGCGTTTTACCCAAGCTCTTGAGGTTTCCGAATGGATGAAGAAAAACGGTGTCTGCATATTTTCAGCCAGCGAGCATGCGGTGCAATTGGATCTGATTGGCCGAGTACGTGGATATCTTTCAGCCGAAAGCTATTTCAATCAGTTGAAGGAGCAAGACCAGACTGATAAGACATATGGTGCACTCCTGAATTGCTACGTTCGGCAGCGGCAAGTTGACAAATCCCTCTCGCATTTGCAAAAAATGAAAGAGATGGGTTTTGCAACTTCGGAACTCACTTACAATGACATCATGTGCTTGTATACTAATGTTGGCCAGCATGAAAAGGTCCCTGAGGTGCTAGCAGAGATGAAGGAGAAAAATGTTTCTCCGGACAACTTCAGCTACAGAATCTGCATCAATTCGTACGGTGCTAGACGTGATCTGGAGGGGATGGAGAATGTGTTAAAGGAGATGGAATCCCAACCTCATATTGTTATGGACTGGAACACTTATGCAGTAGTTGCTAACTTTTTTATAAAAGCGGGTCTTACTGATAAGGCAGTTGATGCTTTGAGTAAATCAGAAGAGAGGCTGAAGAGTAAAGACAGAATTGGCCATAACCATCTAATCTCACTTTATGCGACCTTAGGAAACAAGGAGAAGGTGTTGAGATTGTGGAATTTGGATAAAAGTGATTCTACGAGATTCATCAATAGGGACTACATCACTATGCTCGAGTCACTGGTGAGACTGAGTGAACTTGAAGAAGCTGAAAAAGTGCTGAAAGAGTGGGAATCATCTGGGAATTGCTATGATTTTCGAGTTCCTAACACTGTCATTGTTGGCTATATTGACAAGGGAATGTGTGAGAGAGCCGAAGCCCTGCTTGAAGACTTGATGGAGAAGGGAAAGGCTACCACACCAAACAGTTGGGGTGCTGTGGCTGTTCAATATCTGGACAGGGGTGAGACTGAAAAAGCTGTAGAGTGCATGAAGGCAGCCCTTTCTCTAAATATGGATAAAGGATGGAAGCCTAATCTTCGTGTGATCACGGGCATATTGAATTGGCTTGGTGATAAGGGCAGCATTGAAGAAGTAGAAGCTTTTGTAGGCTCATTGAGGTCTGTCATTCCAGTGAACAGAGAGATGTATCATGCCTTGATGAAGGCTCATATAAGAGGTGGTAAAGAAGTTCACGAGTTGTTAAATCAAATGAAGTCTGACAAAATAGATGAAGATGAAGAAACAAAGAAAATTCTTGGCACTTGGCAAGGAACAACCGAAGGTAAGAACATTTGCTGA

Protein sequence

MDHKLFSKALTRYAIAGRSYHTNRLKKATLYAKISPLGDPSISVEPELDGWVQEGKKVRVAELQRIIHDLRKRKRFTQALEVSEWMKKNGVCIFSASEHAVQLDLIGRVRGYLSAESYFNQLKEQDQTDKTYGALLNCYVRQRQVDKSLSHLQKMKEMGFATSELTYNDIMCLYTNVGQHEKVPEVLAEMKEKNVSPDNFSYRICINSYGARRDLEGMENVLKEMESQPHIVMDWNTYAVVANFFIKAGLTDKAVDALSKSEERLKSKDRIGHNHLISLYATLGNKEKVLRLWNLDKSDSTRFINRDYITMLESLVRLSELEEAEKVLKEWESSGNCYDFRVPNTVIVGYIDKGMCERAEALLEDLMEKGKATTPNSWGAVAVQYLDRGETEKAVECMKAALSLNMDKGWKPNLRVITGILNWLGDKGSIEEVEAFVGSLRSVIPVNREMYHALMKAHIRGGKEVHELLNQMKSDKIDEDEETKKILGTWQGTTEGKNIC

Homology

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BLAST of Lcy06g007310 vs. ExPASy Swiss-Prot
Match: Q84JR3 (Pentatricopeptide repeat-containing protein At4g21705, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At4g21705 PE=2 SV=1)

HSP 1 Score: 619.0 bits (1595), Expect = 4.7e-176
Identity = 302/477 (63.31%), Postives = 374/477 (78.41%), Query Frame = 0


Query: 15  IAGRSYHTNRLKKATLYAKISPLGDPSISVEPELDGWVQEGKKVRVAELQRIIHDLRKRK 74
           IA R Y+TNR+KK TLY+KISPLGDP  SV PEL  WVQ GKKV VAEL RI+HDLR+RK
Sbjct: 12  IASRYYYTNRVKKTTLYSKISPLGDPKSSVYPELQNWVQCGKKVSVAELIRIVHDLRRRK 71

Query: 75  RFTQALEVSEWMKKNGVCIFSASEHAVQLDLIGRVRGYLSAESYFNQLKEQDQTDKTYGA 134
           RF  ALEVS+WM + GVC+FS +EHAV LDLIGRV G+++AE YF  LKEQ + DKTYGA
Sbjct: 72  RFLHALEVSKWMNETGVCVFSPTEHAVHLDLIGRVYGFVTAEEYFENLKEQYKNDKTYGA 131

Query: 135 LLNCYVRQRQVDKSLSHLQKMKEMGFATSELTYNDIMCLYTNVGQHEKVPEVLAEMKEKN 194
           LLNCYVRQ+ V+KSL H +KMKEMGF TS LTYN+IMCLYTN+GQHEKVP+VL EMKE+N
Sbjct: 132 LLNCYVRQQNVEKSLLHFEKMKEMGFVTSSLTYNNIMCLYTNIGQHEKVPKVLEEMKEEN 191

Query: 195 VSPDNFSYRICINSYGARRDLEGMENVLKEMESQPHIVMDWNTYAVVANFFIKAGLTDKA 254
           V+PDN+SYRICIN++GA  DLE +   L++ME +  I MDWNTYAV A F+I  G  D+A
Sbjct: 192 VAPDNYSYRICINAFGAMYDLERIGGTLRDMERRQDITMDWNTYAVAAKFYIDGGDCDRA 251

Query: 255 VDALSKSEERLKSKDRIGHNHLISLYATLGNKEKVLRLWNLDKSDSTRFINRDYITMLES 314
           V+ L  SE RL+ KD  G+NHLI+LYA LG K +VLRLW+L+K    R IN+DY+T+L+S
Sbjct: 252 VELLKMSENRLEKKDGEGYNHLITLYARLGKKIEVLRLWDLEKDVCKRRINQDYLTVLQS 311

Query: 315 LVRLSELEEAEKVLKEWESSGNCYDFRVPNTVIVGYIDKGMCERAEALLEDLMEKGKATT 374
           LV++  L EAE+VL EW+SSGNCYDFRVPNTVI GYI K M E+AEA+LEDL  +GKATT
Sbjct: 312 LVKIDALVEAEEVLTEWKSSGNCYDFRVPNTVIRGYIGKSMEEKAEAMLEDLARRGKATT 371

Query: 375 PNSWGAVAVQYLDRGETEKAVECMKAALSLNM-DKGWKPNLRVITGILNWLGDKGSIEEV 434
           P SW  VA  Y ++G  E A +CMK AL + +  + W+P L ++T +L+W+GD+GS++EV
Sbjct: 372 PESWELVATAYAEKGTLENAFKCMKTALGVEVGSRKWRPGLTLVTSVLSWVGDEGSLKEV 431

Query: 435 EAFVGSLRSVIPVNREMYHALMKAHIR-GGKEVHELLNQMKSDKIDEDEETKKILGT 490
           E+FV SLR+ I VN++MYHAL+KA IR GG+ +  LL +MK DKI+ DEET  IL T
Sbjct: 432 ESFVASLRNCIGVNKQMYHALVKADIREGGRNIDTLLQRMKDDKIEIDEETTVILST 488

[Close]

BLAST of Lcy06g007310 vs. ExPASy Swiss-Prot
Match: Q9SKU6 (Pentatricopeptide repeat-containing protein At2g20710, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At2g20710 PE=2 SV=1)

HSP 1 Score: 295.8 bits (756), Expect = 9.1e-79
Identity = 151/404 (37.38%), Postives = 249/404 (61.63%), Query Frame = 0


Query: 29  TLYAKISPLGDPSISVEPELDGWVQEGKKVRVAELQRIIHDLRKRKRFTQALEVSEWMKK 88
           TL  +++  GDPS S+   LDGW+ +G  V+ +EL  II  LRK  RF+ AL++S+WM +
Sbjct: 39  TLQRRVARSGDPSASIIKVLDGWLDQGNLVKTSELHSIIKMLRKFSRFSHALQISDWMSE 98

Query: 89  NGVCIFSASEHAVQLDLIGRVRGYLSAESYFNQLKEQDQTDKTYGALLNCYVRQRQVDKS 148
           + V   S  + A++LDLI +V G   AE +F  +  + +    YGALLNCY  ++ + K+
Sbjct: 99  HRVHEISEGDVAIRLDLIAKVGGLGEAEKFFETIPMERRNYHLYGALLNCYASKKVLHKA 158

Query: 149 LSHLQKMKEMGFATSELTYNDIMCLYTNVGQHEKVPEVLAEMKEKNVSPDNFSYRICINS 208
               Q+MKE+GF    L YN ++ LY   G++  V ++L EM+++ V PD F+    +++
Sbjct: 159 EQVFQEMKELGFLKGCLPYNVMLNLYVRTGKYTMVEKLLREMEDETVKPDIFTVNTRLHA 218

Query: 209 YGARRDLEGMENVLKEMESQPHIVMDWNTYAVVANFFIKAGLTDKAVDALSKSEERLKS- 268
           Y    D+EGME  L   E+   + +DW TYA  AN +IKAGLT+KA++ L KSE+ + + 
Sbjct: 219 YSVVSDVEGMEKFLMRCEADQGLHLDWRTYADTANGYIKAGLTEKALEMLRKSEQMVNAQ 278

Query: 269 KDRIGHNHLISLYATLGNKEKVLRLWNLDKSDSTRFINRDYITMLESLVRLSELEEAEKV 328
           K +  +  L+S Y   G KE+V RLW+L K +   F N  YI+++ +L+++ ++EE EK+
Sbjct: 279 KRKHAYEVLMSFYGAAGKKEEVYRLWSLYK-ELDGFYNTGYISVISALLKMDDIEEVEKI 338

Query: 329 LKEWESSGNCYDFRVPNTVIVGYIDKGMCERAEALLEDLMEKGKATTPNSWGAVAVQYLD 388
           ++EWE+  + +D R+P+ +I GY  KGM E+AE ++  L++K +    ++W  +A+ Y  
Sbjct: 339 MEEWEAGHSLFDIRIPHLLITGYCKKGMMEKAEEVVNILVQKWRVEDTSTWERLALGYKM 398

Query: 389 RGETEKAVECMKAALSLNMDKGWKPNLRVITGILNWLGDKGSIE 432
            G+ EKAVE  K A+ ++   GW+P+  V+   +++L  +  +E
Sbjct: 399 AGKMEKAVEKWKRAIEVS-KPGWRPHQVVLMSCVDYLEGQRDME 440

[Close]

BLAST of Lcy06g007310 vs. ExPASy Swiss-Prot
Match: Q8LPS6 (Pentatricopeptide repeat-containing protein At1g02150 OS=Arabidopsis thaliana OX=3702 GN=At1g02150 PE=2 SV=2)

HSP 1 Score: 291.2 bits (744), Expect = 2.2e-77
Identity = 153/427 (35.83%), Postives = 253/427 (59.25%), Query Frame = 0


Query: 30  LYAKISPLGDPSISVEPELDGWVQEGKKVRVAELQRIIHDLRKRKRFTQALEVSEWMKKN 89
           +Y KIS +  P +     L+ W + G+K+   EL R++ +LRK KR  QALEV +WM   
Sbjct: 69  IYKKISLMEKPELGAASVLNQWEKAGRKLTKWELCRVVKELRKYKRANQALEVYDWMNNR 128

Query: 90  GVCI-FSASEHAVQLDLIGRVRGYLSAESYFNQLKEQDQTDKTYGALLNCYVRQRQVDKS 149
           G     SAS+ A+QLDLIG+VRG   AE +F QL E  +  + YG+LLN YVR +  +K+
Sbjct: 129 GERFRLSASDAAIQLDLIGKVRGIPDAEEFFLQLPENFKDRRVYGSLLNAYVRAKSREKA 188

Query: 150 LSHLQKMKEMGFATSELTYNDIMCLYTNVGQHEKVPEVLAEMKEKNVSPDNFSYRICINS 209
            + L  M++ G+A   L +N +M LY N+ +++KV  ++ EMK+K++  D +SY I ++S
Sbjct: 189 EALLNTMRDKGYALHPLPFNVMMTLYMNLREYDKVDAMVFEMKQKDIRLDIYSYNIWLSS 248

Query: 210 YGARRDLEGMENVLKEMESQPHIVMDWNTYAVVANFFIKAGLTDKAVDALSKSEERLKSK 269
            G+   +E ME V ++M+S   I  +W T++ +A  +IK G T+KA DAL K E R+  +
Sbjct: 249 CGSLGSVEKMELVYQQMKSDVSIYPNWTTFSTMATMYIKMGETEKAEDALRKVEARITGR 308

Query: 270 DRIGHNHLISLYATLGNKEKVLRLWNLDKSDSTRFINRDYITMLESLVRLSELEEAEKVL 329
           +RI +++L+SLY +LGNK+++ R+W++ KS      N  Y  ++ SLVR+ ++E AEKV 
Sbjct: 309 NRIPYHYLLSLYGSLGNKKELYRVWHVYKSVVPSIPNLGYHALVSSLVRMGDIEGAEKVY 368

Query: 330 KEWESSGNCYDFRVPNTVIVGYIDKGMCERAEALLEDLMEKGKATTPNSWGAVAVQYLDR 389
           +EW    + YD R+PN ++  Y+     E AE L + ++E G   + ++W  +AV +  +
Sbjct: 369 EEWLPVKSSYDPRIPNLLMNAYVKNDQLETAEGLFDHMVEMGGKPSSSTWEILAVGHTRK 428

Query: 390 GETEKAVECMKAALSLNMDKGWKPNLRVITGILNWLGDKGSIEEVEAFVGSLRSVIPVNR 449
               +A+ C++ A S      W+P + +++G      ++  +   EA +  LR    +  
Sbjct: 429 RCISEALTCLRNAFSAEGSSNWRPKVLMLSGFFKLCEEESDVTSKEAVLELLRQSGDLED 488

Query: 450 EMYHALM 456
           + Y AL+
Sbjct: 489 KSYLALI 495

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BLAST of Lcy06g007310 vs. ExPASy Swiss-Prot
Match: Q93WC5 (Pentatricopeptide repeat-containing protein At4g01990, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At4g01990 PE=2 SV=1)

HSP 1 Score: 283.9 bits (725), Expect = 3.6e-75
Identity = 156/473 (32.98%), Postives = 267/473 (56.45%), Query Frame = 0


Query: 16  AGRSYHTNRLKKATLYAKISPLGD-PSISVEPELDGWVQEGKKVRVAELQRIIHDLRKRK 75
           A  S  T   K  ++Y K+S LG      +E  L+ +V EG  V+  +L R   DLRK +
Sbjct: 27  AAASVPTKAKKHRSIYKKLSSLGTRGGGKMEETLNQFVMEGVPVKKHDLIRYAKDLRKFR 86

Query: 76  RFTQALEVSEWMKKNGVCIFSASEHAVQLDLIGRVRGYLSAESYFNQLKEQDQTDKTYGA 135
           +  +ALE+ EWM++  +  F+ S+HA++L+LI + +G  +AE+YFN L +  +   TYG+
Sbjct: 87  QPQRALEIFEWMERKEIA-FTGSDHAIRLNLIAKSKGLEAAETYFNSLDDSIKNQSTYGS 146

Query: 136 LLNCYVRQRQVDKSLSHLQKMKEMGFATSELTYNDIMCLYTNVGQHEKVPEVLAEMKEKN 195
           LLNCY  +++  K+ +H + M ++   ++ L +N++M +Y  +GQ EKVP ++  MKEK+
Sbjct: 147 LLNCYCVEKEEVKAKAHFENMVDLNHVSNSLPFNNLMAMYMGLGQPEKVPALVVAMKEKS 206

Query: 196 VSPDNFSYRICINSYGARRDLEGMENVLKEMESQPHIVMDWNTYAVVANFFIKAGLTDKA 255
           ++P + +Y + I S G+ +DL+G+E VL EM+++   +  WNT+A +A  +IK GL  KA
Sbjct: 207 ITPCDITYSMWIQSCGSLKDLDGVEKVLDEMKAEGEGIFSWNTFANLAAIYIKVGLYGKA 266

Query: 256 VDALSKSEERLKSKDRIGHNHLISLYATLGNKEKVLRLWNLDKSDSTRFINRDYITMLES 315
            +AL   E  +    R  ++ LI+LY  + N  +V R+W+L K       N  Y+TML +
Sbjct: 267 EEALKSLENNMNPDVRDCYHFLINLYTGIANASEVYRVWDLLKKRYPNVNNSSYLTMLRA 326

Query: 316 LVRLSELEEAEKVLKEWESSGNCYDFRVPNTVIVGYIDKGMCERAEALLEDLMEKGKATT 375
           L +L +++  +KV  EWES+   YD R+ N  I  Y+ + M E AEA+    M+K K   
Sbjct: 327 LSKLDDIDGVKKVFAEWESTCWTYDMRMANVAISSYLKQNMYEEAEAVFNGAMKKCKGQF 386

Query: 376 PNSWGAVAVQYLDRGETEKAVECMKAALSLNMDKGWKPNLRVITGILNWLGDKGSIEEVE 435
             +   + +  L   + + A++  +AA+ L+ DK W  +  +I+       +   ++  E
Sbjct: 387 SKARQLLMMHLLKNDQADLALKHFEAAV-LDQDKNWTWSSELISSFFLHFEEAKDVDGAE 446

Query: 436 AFVGSLRSVIPVNREMYHALMKAHIRGGKEVHELLNQMKSDKIDEDEETKKIL 488
            F  +L    P++ E Y  LMK ++  GK   ++  +++   I  DEE + +L
Sbjct: 447 EFCKTLTKWSPLSSETYTLLMKTYLAAGKACPDMKKRLEEQGILVDEEQECLL 497

[Close]

BLAST of Lcy06g007310 vs. ExPASy Swiss-Prot
Match: O22714 (Pentatricopeptide repeat-containing protein At1g60770 OS=Arabidopsis thaliana OX=3702 GN=At1g60770 PE=1 SV=1)

HSP 1 Score: 271.6 bits (693), Expect = 1.8e-71
Identity = 142/469 (30.28%), Postives = 257/469 (54.80%), Query Frame = 0


Query: 22  TNRLKKATLYAKISPLGDPSISVEPELDGWVQEGKKVRVAELQRIIHDLRKRKRFTQALE 81
           T +  +  LY ++   G   + V  +L+ +++  K V   E+   I  LR R  +  AL+
Sbjct: 17  TKKYIEEPLYNRLFKDGGTEVKVRQQLNQFLKGTKHVFKWEVGDTIKKLRNRGLYYPALK 76

Query: 82  VSEWMKKNGVCIFSASEHAVQLDLIGRVRGYLSAESYFNQLKEQDQTDKTYGALLNCYVR 141
           +SE M++ G+   + S+ A+ LDL+ + R   + E+YF  L E  +T+ TYG+LLNCY +
Sbjct: 77  LSEVMEERGM-NKTVSDQAIHLDLVAKAREITAGENYFVDLPETSKTELTYGSLLNCYCK 136

Query: 142 QRQVDKSLSHLQKMKEMGFATSELTYNDIMCLYTNVGQHEKVPEVLAEMKEKNVSPDNFS 201
           +   +K+   L KMKE+    S ++YN +M LYT  G+ EKVP ++ E+K +NV PD+++
Sbjct: 137 ELLTEKAEGLLNKMKELNITPSSMSYNSLMTLYTKTGETEKVPAMIQELKAENVMPDSYT 196

Query: 202 YRICINSYGARRDLEGMENVLKEMESQPHIVMDWNTYAVVANFFIKAGLTDKAVDALSKS 261
           Y + + +  A  D+ G+E V++EM     +  DW TY+ +A+ ++ AGL+ KA  AL + 
Sbjct: 197 YNVWMRALAATNDISGVERVIEEMNRDGRVAPDWTTYSNMASIYVDAGLSQKAEKALQEL 256

Query: 262 EERLKSKDRIGHNHLISLYATLGNKEKVLRLWNLDKSDSTRFINRDYITMLESLVRLSEL 321
           E +   +D   +  LI+LY  LG   +V R+W   +    +  N  Y+ M++ LV+L++L
Sbjct: 257 EMKNTQRDFTAYQFLITLYGRLGKLTEVYRIWRSLRLAIPKTSNVAYLNMIQVLVKLNDL 316

Query: 322 EEAEKVLKEWESSGNCYDFRVPNTVIVGYIDKGMCERAEALLEDLMEKGKATTPNSWGAV 381
             AE + KEW+++ + YD R+ N +I  Y  +G+ ++A  L E    +G      +W   
Sbjct: 317 PGAETLFKEWQANCSTYDIRIVNVLIGAYAQEGLIQKANELKEKAPRRGGKLNAKTWEIF 376

Query: 382 AVQYLDRGETEKAVECMKAALSLNMDKG--WKPNLRVITGILNWLGDKGSIEEVEAFVGS 441
              Y+  G+  +A+ECM  A+S+    G  W P+   +  ++++   K  +   E  +  
Sbjct: 377 MDYYVKSGDMARALECMSKAVSIGKGDGGKWLPSPETVRALMSYFEQKKDVNGAENLLEI 436

Query: 442 LRS-VIPVNREMYHALMKAHIRGGKEVHELLNQMKSDKIDEDEETKKIL 488
           L++    +  E++  L++ +   GK    +  ++K + ++ +E TKK+L
Sbjct: 437 LKNGTDNIGAEIFEPLIRTYAAAGKSHPAMRRRLKMENVEVNEATKKLL 484

[Close]

BLAST of Lcy06g007310 vs. ExPASy TrEMBL
Match: A0A6J1K124 (pentatricopeptide repeat-containing protein At4g21705, mitochondrial isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111490120 PE=4 SV=1)

HSP 1 Score: 937.2 bits (2421), Expect = 2.9e-269
Identity = 460/495 (92.93%), Postives = 478/495 (96.57%), Query Frame = 0


Query: 4   KLFSKALTRYAIAGRSYHTNRLKKATLYAKISPLGDPSISVEPELDGWVQEGKKVRVAEL 63
           + FSKALTRYA+A R YHTNRLKKATLYAKISPLGDP++SVEPELDGWV+EGKKVR+AEL
Sbjct: 3   QFFSKALTRYALADRFYHTNRLKKATLYAKISPLGDPNVSVEPELDGWVKEGKKVRIAEL 62

Query: 64  QRIIHDLRKRKRFTQALEVSEWMKKNGVCIFSASEHAVQLDLIGRVRGYLSAESYFNQLK 123
           QRIIHDLRKRKRFTQALEVSEWMKK GVCIFS SEHAVQLDLIGRVRGYLSAESYFNQLK
Sbjct: 63  QRIIHDLRKRKRFTQALEVSEWMKKTGVCIFSPSEHAVQLDLIGRVRGYLSAESYFNQLK 122

Query: 124 EQDQTDKTYGALLNCYVRQRQVDKSLSHLQKMKEMGFATSELTYNDIMCLYTNVGQHEKV 183
           EQDQTDKTYGALLNCYVRQRQV+KSLSHLQKMKEMGFATSELTYND+MCLYTNVGQH+KV
Sbjct: 123 EQDQTDKTYGALLNCYVRQRQVEKSLSHLQKMKEMGFATSELTYNDMMCLYTNVGQHDKV 182

Query: 184 PEVLAEMKEKNVSPDNFSYRICINSYGARRDLEGMENVLKEMESQPHIVMDWNTYAVVAN 243
           PEVLAEMKEKNVSPDNFSYRICINSYGARRDLEGMENVLKEMESQPHIVMDWNTYAVVAN
Sbjct: 183 PEVLAEMKEKNVSPDNFSYRICINSYGARRDLEGMENVLKEMESQPHIVMDWNTYAVVAN 242

Query: 244 FFIKAGLTDKAVDALSKSEERLKSKDRIGHNHLISLYATLGNKEKVLRLWNLDKSDSTRF 303
           FFIKA L DKAVDAL K+EERLKSKDRIGHNHLISLY TLGNKEKVLRLWNLDK+D+TRF
Sbjct: 243 FFIKADLADKAVDALKKAEERLKSKDRIGHNHLISLYTTLGNKEKVLRLWNLDKTDTTRF 302

Query: 304 INRDYITMLESLVRLSELEEAEKVLKEWESSGNCYDFRVPNTVIVGYIDKGMCERAEALL 363
           INRDYITMLESLVRL ELEEAEKVLKEWESSGNCYDFRVPNTVIVGYIDKGMCERAEALL
Sbjct: 303 INRDYITMLESLVRLGELEEAEKVLKEWESSGNCYDFRVPNTVIVGYIDKGMCERAEALL 362

Query: 364 EDLMEKGKATTPNSWGAVAVQYLDRGETEKAVECMKAALSLNMDKGWKPNLRVITGILNW 423
           EDLMEKGK TTPNSWGAVAVQY+DRGETEK+VECMKAAL+LNMDKGWKPNLRVITGILNW
Sbjct: 363 EDLMEKGKTTTPNSWGAVAVQYMDRGETEKSVECMKAALTLNMDKGWKPNLRVITGILNW 422

Query: 424 LGDKGSIEEVEAFVGSLRSVIPVNREMYHALMKAHIRGGKEVHELLNQMKSDKIDEDEET 483
           LG+  SIEEVEAFVGSLRS IPVNREMYHALMK HIRGGKEVHELLNQMKSDKIDEDEET
Sbjct: 423 LGENASIEEVEAFVGSLRSAIPVNREMYHALMKVHIRGGKEVHELLNQMKSDKIDEDEET 482

Query: 484 KKILGTWQGTTEGKN 499
           KKILGT Q TTEG++
Sbjct: 483 KKILGTGQETTEGRS 497

[Close]

BLAST of Lcy06g007310 vs. ExPASy TrEMBL
Match: A0A6J1GTN5 (pentatricopeptide repeat-containing protein At4g21705, mitochondrial isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111457015 PE=4 SV=1)

HSP 1 Score: 935.6 bits (2417), Expect = 8.3e-269
Identity = 461/493 (93.51%), Postives = 476/493 (96.55%), Query Frame = 0


Query: 4   KLFSKALTRYAIAGRSYHTNRLKKATLYAKISPLGDPSISVEPELDGWVQEGKKVRVAEL 63
           + FSKALTRYA+AGR YHTNRLKKATLYAKISPLGDPS+SVEP LDGWV+EGKKVR+AEL
Sbjct: 3   QFFSKALTRYALAGRFYHTNRLKKATLYAKISPLGDPSVSVEPVLDGWVKEGKKVRIAEL 62

Query: 64  QRIIHDLRKRKRFTQALEVSEWMKKNGVCIFSASEHAVQLDLIGRVRGYLSAESYFNQLK 123
           QRIIHDLRKRKRFTQALEVSEWMKK GVCIFS SEHAVQLDLIGRVRGYLSAESYFNQLK
Sbjct: 63  QRIIHDLRKRKRFTQALEVSEWMKKTGVCIFSPSEHAVQLDLIGRVRGYLSAESYFNQLK 122

Query: 124 EQDQTDKTYGALLNCYVRQRQVDKSLSHLQKMKEMGFATSELTYNDIMCLYTNVGQHEKV 183
           EQDQTDKTYGALLNCYVRQRQV+KSLSHLQKMKEMGFATSELTYND+MCLYTNVGQH+KV
Sbjct: 123 EQDQTDKTYGALLNCYVRQRQVEKSLSHLQKMKEMGFATSELTYNDMMCLYTNVGQHDKV 182

Query: 184 PEVLAEMKEKNVSPDNFSYRICINSYGARRDLEGMENVLKEMESQPHIVMDWNTYAVVAN 243
           PEVLAEMKEKNVSPDNFSYRICINSYGARRDLEGMENVLKEMESQPHIVMDWNTYAVVAN
Sbjct: 183 PEVLAEMKEKNVSPDNFSYRICINSYGARRDLEGMENVLKEMESQPHIVMDWNTYAVVAN 242

Query: 244 FFIKAGLTDKAVDALSKSEERLKSKDRIGHNHLISLYATLGNKEKVLRLWNLDKSDSTRF 303
           FFIKA L DKAVDAL K+EERLKSKDRIGHNHLISLYATLGNKEKVLRLWNLDK+D+TR 
Sbjct: 243 FFIKADLADKAVDALKKAEERLKSKDRIGHNHLISLYATLGNKEKVLRLWNLDKTDTTRL 302

Query: 304 INRDYITMLESLVRLSELEEAEKVLKEWESSGNCYDFRVPNTVIVGYIDKGMCERAEALL 363
           INRDYITMLESLVRL ELEEAEKVLKEWESSGNCYDFRVPNTVIVGYIDKGMCERAEALL
Sbjct: 303 INRDYITMLESLVRLGELEEAEKVLKEWESSGNCYDFRVPNTVIVGYIDKGMCERAEALL 362

Query: 364 EDLMEKGKATTPNSWGAVAVQYLDRGETEKAVECMKAALSLNMDKGWKPNLRVITGILNW 423
           EDLMEKGK TTPN WGAVAVQY+DR ETEK+VECMKAAL+LNMDKGWKPNLRVITGILNW
Sbjct: 363 EDLMEKGKTTTPNCWGAVAVQYMDRSETEKSVECMKAALTLNMDKGWKPNLRVITGILNW 422

Query: 424 LGDKGSIEEVEAFVGSLRSVIPVNREMYHALMKAHIRGGKEVHELLNQMKSDKIDEDEET 483
           LG+  SIEEVEAFVGSLRSVIPVNREMYHALMKAHIRGGKEVHELLNQMKSDKIDEDEET
Sbjct: 423 LGENASIEEVEAFVGSLRSVIPVNREMYHALMKAHIRGGKEVHELLNQMKSDKIDEDEET 482

Query: 484 KKILGTWQGTTEG 497
           KKILGT Q TTEG
Sbjct: 483 KKILGTGQETTEG 495

[Close]

BLAST of Lcy06g007310 vs. ExPASy TrEMBL
Match: A0A6J1CGU2 (pentatricopeptide repeat-containing protein At4g21705, mitochondrial OS=Momordica charantia OX=3673 GN=LOC111010721 PE=4 SV=1)

HSP 1 Score: 928.7 bits (2399), Expect = 1.0e-266
Identity = 457/499 (91.58%), Postives = 478/499 (95.79%), Query Frame = 0


Query: 1   MDHKLFSKALTRYAIAGRSYHTNRLKKATLYAKISPLGDPSISVEPELDGWVQEGKKVRV 60
           MD  LFSKALTRYA+AGRSYHTNR+KKATLYAKISPLGDPSISV PELDGWVQEGKK+RV
Sbjct: 10  MDQNLFSKALTRYAMAGRSYHTNRMKKATLYAKISPLGDPSISVGPELDGWVQEGKKIRV 69

Query: 61  AELQRIIHDLRKRKRFTQALEVSEWMKKNGVCIFSASEHAVQLDLIGRVRGYLSAESYFN 120
           AELQRIIHDLRKRKRFTQALEVSEWMK++GVCIFS SEHAVQLDLIGRVRGYLSAESYF+
Sbjct: 70  AELQRIIHDLRKRKRFTQALEVSEWMKQSGVCIFSPSEHAVQLDLIGRVRGYLSAESYFD 129

Query: 121 QLKEQDQTDKTYGALLNCYVRQRQVDKSLSHLQKMKEMGFATSELTYNDIMCLYTNVGQH 180
           QLK+QD+T KTYGALLNCYVRQRQVDKSLSHLQKMKEMGFATSELTYND+MCLYTNVGQH
Sbjct: 130 QLKDQDKTGKTYGALLNCYVRQRQVDKSLSHLQKMKEMGFATSELTYNDMMCLYTNVGQH 189

Query: 181 EKVPEVLAEMKEKNVSPDNFSYRICINSYGARRDLEGMENVLKEMESQPHIVMDWNTYAV 240
           +KVP+VLAEMKE  VSPDNFSYRICINSYG R DLEGME+VLKEMESQPHIVMDWNTYAV
Sbjct: 190 DKVPQVLAEMKENKVSPDNFSYRICINSYGTRCDLEGMESVLKEMESQPHIVMDWNTYAV 249

Query: 241 VANFFIKAGLTDKAVDALSKSEERLKSKDRIGHNHLISLYATLGNKEKVLRLWNLDKSDS 300
           VANFFIK GLTDKAVDAL KSEERL SKDRIGHNHLISLYATLGNKE+VLRLW LDKSDS
Sbjct: 250 VANFFIKGGLTDKAVDALRKSEERLNSKDRIGHNHLISLYATLGNKEEVLRLWKLDKSDS 309

Query: 301 TRFINRDYITMLESLVRLSELEEAEKVLKEWESSGNCYDFRVPNTVIVGYIDKGMCERAE 360
           TRFINRDYITMLESLVRL ELEEAEKVLKEWESSGNCYDFRVPNTVIVGYIDKGMCERAE
Sbjct: 310 TRFINRDYITMLESLVRLGELEEAEKVLKEWESSGNCYDFRVPNTVIVGYIDKGMCERAE 369

Query: 361 ALLEDLMEKGKATTPNSWGAVAVQYLDRGETEKAVECMKAALSLNMDKGWKPNLRVITGI 420
           ALLEDLM++GKATTPNSWGAVAVQYLDRGETEKAVECMK ALSL++DKGWKPNLRVITGI
Sbjct: 370 ALLEDLMKEGKATTPNSWGAVAVQYLDRGETEKAVECMKTALSLHIDKGWKPNLRVITGI 429

Query: 421 LNWLGDKGSIEEVEAFVGSLRSVIPVNREMYHALMKAHIRGGKEVHELLNQMKSDKIDED 480
           LNW+GD  S EEVEAFVGSLRSVIPVNREMYHALMKAHIRGGKEVH LL+QMKSD+IDED
Sbjct: 430 LNWIGDNSSTEEVEAFVGSLRSVIPVNREMYHALMKAHIRGGKEVHGLLSQMKSDQIDED 489

Query: 481 EETKKILGTWQGTTEGKNI 500
           EETKKILGTWQ  TEGK+I
Sbjct: 490 EETKKILGTWQEATEGKSI 508

[Close]

BLAST of Lcy06g007310 vs. ExPASy TrEMBL
Match: A0A5A7UM45 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold861G00740 PE=4 SV=1)

HSP 1 Score: 891.7 bits (2303), Expect = 1.4e-255
Identity = 438/499 (87.78%), Postives = 467/499 (93.59%), Query Frame = 0


Query: 1   MDHKLFSKALTRYAIAGRSYHTNRLKKATLYAKISPLGDPSISVEPELDGWVQEGKKVRV 60
           MD KLFSKALT YA+A RSYHT RLKKATLYAKISPLGDPSISVE ELDGWVQEGKKVRV
Sbjct: 1   MDQKLFSKALTHYALASRSYHTTRLKKATLYAKISPLGDPSISVESELDGWVQEGKKVRV 60

Query: 61  AELQRIIHDLRKRKRFTQALEVSEWMKKNGVCIFSASEHAVQLDLIGRVRGYLSAESYFN 120
           AELQRII D RKR RF+QAL+VSEWMKK+G CIFS +EHAVQLDLIGRVRGYLSAE YFN
Sbjct: 61  AELQRIIRDFRKRSRFSQALQVSEWMKKSGACIFSPTEHAVQLDLIGRVRGYLSAEKYFN 120

Query: 121 QLKEQDQTDKTYGALLNCYVRQRQVDKSLSHLQKMKEMGFATSELTYNDIMCLYTNVGQH 180
           QLKEQDQ  KTYGALLNCYVRQ+QVDKSLSHLQKMKE+GFATSELTYNDIMCLYT VGQH
Sbjct: 121 QLKEQDQNIKTYGALLNCYVRQQQVDKSLSHLQKMKELGFATSELTYNDIMCLYTRVGQH 180

Query: 181 EKVPEVLAEMKEKNVSPDNFSYRICINSYGARRDLEGMENVLKEMESQPHIVMDWNTYAV 240
           EKVPEVLAEMK  NVSPDNFSYRICINSYGAR+DLEGMENVLKEMESQPHIVMDWNTYAV
Sbjct: 181 EKVPEVLAEMKGNNVSPDNFSYRICINSYGARKDLEGMENVLKEMESQPHIVMDWNTYAV 240

Query: 241 VANFFIKAGLTDKAVDALSKSEERLKSKDRIGHNHLISLYATLGNKEKVLRLWNLDKSDS 300
           VANFFIKAGLTDKAVDAL KSEE+LKSKDRIGHNHLISLYATLGNKEKVLR+WNLDK+ +
Sbjct: 241 VANFFIKAGLTDKAVDALRKSEEKLKSKDRIGHNHLISLYATLGNKEKVLRVWNLDKTAT 300

Query: 301 TRFINRDYITMLESLVRLSELEEAEKVLKEWESSGNCYDFRVPNTVIVGYIDKGMCERAE 360
           TR INRDYITMLESLVRL ELEEAEKVLKEWESSGNCYDFRVPNTVIVGYIDKGMCERAE
Sbjct: 301 TRIINRDYITMLESLVRLGELEEAEKVLKEWESSGNCYDFRVPNTVIVGYIDKGMCERAE 360

Query: 361 ALLEDLMEKGKATTPNSWGAVAVQYLDRGETEKAVECMKAALSLNMDKGWKPNLRVITGI 420
            LLE+L +  KATTPNSWGAVAV+YLDRGETEKA+ECMKAALS+N DKGWKPN RVITG+
Sbjct: 361 TLLENLNQNEKATTPNSWGAVAVKYLDRGETEKALECMKAALSVNTDKGWKPNPRVITGV 420

Query: 421 LNWLGDKGSIEEVEAFVGSLRSVIPVNREMYHALMKAHIRGGKEVHELLNQMKSDKIDED 480
           LNWLGDKG +EEVEAFV +LRSVIPVNREMYHAL+K +IR  KEV+E+LN+MK+DKI+ED
Sbjct: 421 LNWLGDKGIVEEVEAFVSALRSVIPVNREMYHALLKVYIRADKEVNEVLNKMKADKINED 480

Query: 481 EETKKILGTWQGTTEGKNI 500
           EETKKILGTW+ TTEGK+I
Sbjct: 481 EETKKILGTWEETTEGKSI 499

[Close]

BLAST of Lcy06g007310 vs. ExPASy TrEMBL
Match: A0A1S3B5N2 (pentatricopeptide repeat-containing protein At4g21705, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103486296 PE=4 SV=1)

HSP 1 Score: 891.7 bits (2303), Expect = 1.4e-255
Identity = 438/499 (87.78%), Postives = 467/499 (93.59%), Query Frame = 0


Query: 1   MDHKLFSKALTRYAIAGRSYHTNRLKKATLYAKISPLGDPSISVEPELDGWVQEGKKVRV 60
           MD KLFSKALT YA+A RSYHT RLKKATLYAKISPLGDPSISVE ELDGWVQEGKKVRV
Sbjct: 1   MDQKLFSKALTHYALASRSYHTTRLKKATLYAKISPLGDPSISVESELDGWVQEGKKVRV 60

Query: 61  AELQRIIHDLRKRKRFTQALEVSEWMKKNGVCIFSASEHAVQLDLIGRVRGYLSAESYFN 120
           AELQRII D RKR RF+QAL+VSEWMKK+G CIFS +EHAVQLDLIGRVRGYLSAE YFN
Sbjct: 61  AELQRIIRDFRKRSRFSQALQVSEWMKKSGACIFSPTEHAVQLDLIGRVRGYLSAEKYFN 120

Query: 121 QLKEQDQTDKTYGALLNCYVRQRQVDKSLSHLQKMKEMGFATSELTYNDIMCLYTNVGQH 180
           QLKEQDQ  KTYGALLNCYVRQ+QVDKSLSHLQKMKE+GFATSELTYNDIMCLYT VGQH
Sbjct: 121 QLKEQDQNIKTYGALLNCYVRQQQVDKSLSHLQKMKELGFATSELTYNDIMCLYTRVGQH 180

Query: 181 EKVPEVLAEMKEKNVSPDNFSYRICINSYGARRDLEGMENVLKEMESQPHIVMDWNTYAV 240
           EKVPEVLAEMK  NVSPDNFSYRICINSYGAR+DLEGMENVLKEMESQPHIVMDWNTYAV
Sbjct: 181 EKVPEVLAEMKGNNVSPDNFSYRICINSYGARKDLEGMENVLKEMESQPHIVMDWNTYAV 240

Query: 241 VANFFIKAGLTDKAVDALSKSEERLKSKDRIGHNHLISLYATLGNKEKVLRLWNLDKSDS 300
           VANFFIKAGLTDKAVDAL KSEE+LKSKDRIGHNHLISLYATLGNKEKVLR+WNLDK+ +
Sbjct: 241 VANFFIKAGLTDKAVDALRKSEEKLKSKDRIGHNHLISLYATLGNKEKVLRVWNLDKTAT 300

Query: 301 TRFINRDYITMLESLVRLSELEEAEKVLKEWESSGNCYDFRVPNTVIVGYIDKGMCERAE 360
           TR INRDYITMLESLVRL ELEEAEKVLKEWESSGNCYDFRVPNTVIVGYIDKGMCERAE
Sbjct: 301 TRIINRDYITMLESLVRLGELEEAEKVLKEWESSGNCYDFRVPNTVIVGYIDKGMCERAE 360

Query: 361 ALLEDLMEKGKATTPNSWGAVAVQYLDRGETEKAVECMKAALSLNMDKGWKPNLRVITGI 420
            LLE+L +  KATTPNSWGAVAV+YLDRGETEKA+ECMKAALS+N DKGWKPN RVITG+
Sbjct: 361 TLLENLNQNEKATTPNSWGAVAVKYLDRGETEKALECMKAALSVNTDKGWKPNPRVITGV 420

Query: 421 LNWLGDKGSIEEVEAFVGSLRSVIPVNREMYHALMKAHIRGGKEVHELLNQMKSDKIDED 480
           LNWLGDKG +EEVEAFV +LRSVIPVNREMYHAL+K +IR  KEV+E+LN+MK+DKI+ED
Sbjct: 421 LNWLGDKGIVEEVEAFVSALRSVIPVNREMYHALLKVYIRADKEVNEVLNKMKADKINED 480

Query: 481 EETKKILGTWQGTTEGKNI 500
           EETKKILGTW+ TTEGK+I
Sbjct: 481 EETKKILGTWEETTEGKSI 499

[Close]

BLAST of Lcy06g007310 vs. NCBI nr
Match: XP_023542644.1 (pentatricopeptide repeat-containing protein At4g21705, mitochondrial isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 939.9 bits (2428), Expect = 9.1e-270
Identity = 461/492 (93.70%), Postives = 480/492 (97.56%), Query Frame = 0


Query: 4   KLFSKALTRYAIAGRSYHTNRLKKATLYAKISPLGDPSISVEPELDGWVQEGKKVRVAEL 63
           + FSKALTRYA+AGR YHTNRLKKATLYAKISPLGDPS+SVEPELDGWV+EGKKVR+AEL
Sbjct: 3   QFFSKALTRYALAGRFYHTNRLKKATLYAKISPLGDPSVSVEPELDGWVKEGKKVRIAEL 62

Query: 64  QRIIHDLRKRKRFTQALEVSEWMKKNGVCIFSASEHAVQLDLIGRVRGYLSAESYFNQLK 123
           QRIIHDLRKRKRFTQALEVSEWMKK GVCIFS SEHAVQLDLIGRVRGYLSAESYFNQLK
Sbjct: 63  QRIIHDLRKRKRFTQALEVSEWMKKTGVCIFSPSEHAVQLDLIGRVRGYLSAESYFNQLK 122

Query: 124 EQDQTDKTYGALLNCYVRQRQVDKSLSHLQKMKEMGFATSELTYNDIMCLYTNVGQHEKV 183
           EQDQTDKTYGALLNCYVRQRQV+KSLSHLQKMKEMGFATSELT+ND+MCLYTNVGQH+KV
Sbjct: 123 EQDQTDKTYGALLNCYVRQRQVEKSLSHLQKMKEMGFATSELTFNDMMCLYTNVGQHDKV 182

Query: 184 PEVLAEMKEKNVSPDNFSYRICINSYGARRDLEGMENVLKEMESQPHIVMDWNTYAVVAN 243
           PEVLAEMKEKN+SPDNFSYRICINSYGARRDLEGMENVLKEMESQPHIVMDWNTYAVVAN
Sbjct: 183 PEVLAEMKEKNISPDNFSYRICINSYGARRDLEGMENVLKEMESQPHIVMDWNTYAVVAN 242

Query: 244 FFIKAGLTDKAVDALSKSEERLKSKDRIGHNHLISLYATLGNKEKVLRLWNLDKSDSTRF 303
           FFIKA LT+KAVDAL K+EERLKSKDRIGHNHLISLYATLGNKEKVLRLWNLDK+D+TRF
Sbjct: 243 FFIKADLTEKAVDALRKAEERLKSKDRIGHNHLISLYATLGNKEKVLRLWNLDKTDATRF 302

Query: 304 INRDYITMLESLVRLSELEEAEKVLKEWESSGNCYDFRVPNTVIVGYIDKGMCERAEALL 363
           INRDYITMLESLVRL ELEEAEKVLKEWESSGNCYDFRVPNTVIVGYIDKGMCERAEALL
Sbjct: 303 INRDYITMLESLVRLGELEEAEKVLKEWESSGNCYDFRVPNTVIVGYIDKGMCERAEALL 362

Query: 364 EDLMEKGKATTPNSWGAVAVQYLDRGETEKAVECMKAALSLNMDKGWKPNLRVITGILNW 423
           EDLMEKGK TTPNSWGAVAVQY+DRGETEK+VECMKAAL+LNMDKGWKPNLRVITGILNW
Sbjct: 363 EDLMEKGKTTTPNSWGAVAVQYMDRGETEKSVECMKAALTLNMDKGWKPNLRVITGILNW 422

Query: 424 LGDKGSIEEVEAFVGSLRSVIPVNREMYHALMKAHIRGGKEVHELLNQMKSDKIDEDEET 483
           LG+  SIEEVEAFVGSLRSVIPVNREMYHALMKAHIRGGKEVHELLNQMKSDK+DEDEET
Sbjct: 423 LGENASIEEVEAFVGSLRSVIPVNREMYHALMKAHIRGGKEVHELLNQMKSDKLDEDEET 482

Query: 484 KKILGTWQGTTE 496
           KKILGT Q TTE
Sbjct: 483 KKILGTGQETTE 494

[Close]

BLAST of Lcy06g007310 vs. NCBI nr
Match: XP_022994385.1 (pentatricopeptide repeat-containing protein At4g21705, mitochondrial isoform X1 [Cucurbita maxima])

HSP 1 Score: 937.2 bits (2421), Expect = 5.9e-269
Identity = 460/495 (92.93%), Postives = 478/495 (96.57%), Query Frame = 0


Query: 4   KLFSKALTRYAIAGRSYHTNRLKKATLYAKISPLGDPSISVEPELDGWVQEGKKVRVAEL 63
           + FSKALTRYA+A R YHTNRLKKATLYAKISPLGDP++SVEPELDGWV+EGKKVR+AEL
Sbjct: 3   QFFSKALTRYALADRFYHTNRLKKATLYAKISPLGDPNVSVEPELDGWVKEGKKVRIAEL 62

Query: 64  QRIIHDLRKRKRFTQALEVSEWMKKNGVCIFSASEHAVQLDLIGRVRGYLSAESYFNQLK 123
           QRIIHDLRKRKRFTQALEVSEWMKK GVCIFS SEHAVQLDLIGRVRGYLSAESYFNQLK
Sbjct: 63  QRIIHDLRKRKRFTQALEVSEWMKKTGVCIFSPSEHAVQLDLIGRVRGYLSAESYFNQLK 122

Query: 124 EQDQTDKTYGALLNCYVRQRQVDKSLSHLQKMKEMGFATSELTYNDIMCLYTNVGQHEKV 183
           EQDQTDKTYGALLNCYVRQRQV+KSLSHLQKMKEMGFATSELTYND+MCLYTNVGQH+KV
Sbjct: 123 EQDQTDKTYGALLNCYVRQRQVEKSLSHLQKMKEMGFATSELTYNDMMCLYTNVGQHDKV 182

Query: 184 PEVLAEMKEKNVSPDNFSYRICINSYGARRDLEGMENVLKEMESQPHIVMDWNTYAVVAN 243
           PEVLAEMKEKNVSPDNFSYRICINSYGARRDLEGMENVLKEMESQPHIVMDWNTYAVVAN
Sbjct: 183 PEVLAEMKEKNVSPDNFSYRICINSYGARRDLEGMENVLKEMESQPHIVMDWNTYAVVAN 242

Query: 244 FFIKAGLTDKAVDALSKSEERLKSKDRIGHNHLISLYATLGNKEKVLRLWNLDKSDSTRF 303
           FFIKA L DKAVDAL K+EERLKSKDRIGHNHLISLY TLGNKEKVLRLWNLDK+D+TRF
Sbjct: 243 FFIKADLADKAVDALKKAEERLKSKDRIGHNHLISLYTTLGNKEKVLRLWNLDKTDTTRF 302

Query: 304 INRDYITMLESLVRLSELEEAEKVLKEWESSGNCYDFRVPNTVIVGYIDKGMCERAEALL 363
           INRDYITMLESLVRL ELEEAEKVLKEWESSGNCYDFRVPNTVIVGYIDKGMCERAEALL
Sbjct: 303 INRDYITMLESLVRLGELEEAEKVLKEWESSGNCYDFRVPNTVIVGYIDKGMCERAEALL 362

Query: 364 EDLMEKGKATTPNSWGAVAVQYLDRGETEKAVECMKAALSLNMDKGWKPNLRVITGILNW 423
           EDLMEKGK TTPNSWGAVAVQY+DRGETEK+VECMKAAL+LNMDKGWKPNLRVITGILNW
Sbjct: 363 EDLMEKGKTTTPNSWGAVAVQYMDRGETEKSVECMKAALTLNMDKGWKPNLRVITGILNW 422

Query: 424 LGDKGSIEEVEAFVGSLRSVIPVNREMYHALMKAHIRGGKEVHELLNQMKSDKIDEDEET 483
           LG+  SIEEVEAFVGSLRS IPVNREMYHALMK HIRGGKEVHELLNQMKSDKIDEDEET
Sbjct: 423 LGENASIEEVEAFVGSLRSAIPVNREMYHALMKVHIRGGKEVHELLNQMKSDKIDEDEET 482

Query: 484 KKILGTWQGTTEGKN 499
           KKILGT Q TTEG++
Sbjct: 483 KKILGTGQETTEGRS 497

[Close]

BLAST of Lcy06g007310 vs. NCBI nr
Match: KAG7012430.1 (Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 936.8 bits (2420), Expect = 7.7e-269
Identity = 461/492 (93.70%), Postives = 477/492 (96.95%), Query Frame = 0


Query: 4   KLFSKALTRYAIAGRSYHTNRLKKATLYAKISPLGDPSISVEPELDGWVQEGKKVRVAEL 63
           + FSKALTRYA+AGR YHTNRLKKATLYAKISPLGDPS+SVEP LDGWV+EGKKVR+AEL
Sbjct: 3   QFFSKALTRYALAGRFYHTNRLKKATLYAKISPLGDPSVSVEPVLDGWVKEGKKVRIAEL 62

Query: 64  QRIIHDLRKRKRFTQALEVSEWMKKNGVCIFSASEHAVQLDLIGRVRGYLSAESYFNQLK 123
           QRIIHDLRKRKRFTQALEVSEWMKK GVCIFS SEHAVQLDLIGRVRGYLSAESYFNQLK
Sbjct: 63  QRIIHDLRKRKRFTQALEVSEWMKKTGVCIFSPSEHAVQLDLIGRVRGYLSAESYFNQLK 122

Query: 124 EQDQTDKTYGALLNCYVRQRQVDKSLSHLQKMKEMGFATSELTYNDIMCLYTNVGQHEKV 183
           EQDQTDKTYGALLNCYVRQRQV+KSLSHLQKMKEMGFATSELTYND+MCLYTNVGQH+KV
Sbjct: 123 EQDQTDKTYGALLNCYVRQRQVEKSLSHLQKMKEMGFATSELTYNDMMCLYTNVGQHDKV 182

Query: 184 PEVLAEMKEKNVSPDNFSYRICINSYGARRDLEGMENVLKEMESQPHIVMDWNTYAVVAN 243
           PEVLAEMKEKNVSPDNFSYRICINSYGARRDLEGMENVLKEMESQPHIVMDWNTYAVVAN
Sbjct: 183 PEVLAEMKEKNVSPDNFSYRICINSYGARRDLEGMENVLKEMESQPHIVMDWNTYAVVAN 242

Query: 244 FFIKAGLTDKAVDALSKSEERLKSKDRIGHNHLISLYATLGNKEKVLRLWNLDKSDSTRF 303
           FFIKA L DKAVDAL K+EERLKSKDRIGHNHLISLYATLGNKEKVLRLWNLDK+D+TR 
Sbjct: 243 FFIKADLADKAVDALKKAEERLKSKDRIGHNHLISLYATLGNKEKVLRLWNLDKTDTTRL 302

Query: 304 INRDYITMLESLVRLSELEEAEKVLKEWESSGNCYDFRVPNTVIVGYIDKGMCERAEALL 363
           INRDYITMLESLVRL ELEEAEKVLKEWESSGNCYDFRVPNTVIVGYIDKGMCERAEALL
Sbjct: 303 INRDYITMLESLVRLGELEEAEKVLKEWESSGNCYDFRVPNTVIVGYIDKGMCERAEALL 362

Query: 364 EDLMEKGKATTPNSWGAVAVQYLDRGETEKAVECMKAALSLNMDKGWKPNLRVITGILNW 423
           EDLMEKGK TTPNSWGAVAVQY+DR ETEK+VECMKAAL+LNMDKGWKPNLRVITGILNW
Sbjct: 363 EDLMEKGKTTTPNSWGAVAVQYMDRSETEKSVECMKAALTLNMDKGWKPNLRVITGILNW 422

Query: 424 LGDKGSIEEVEAFVGSLRSVIPVNREMYHALMKAHIRGGKEVHELLNQMKSDKIDEDEET 483
           LG+ GSIEEVEAFVGSLRSVIPVNREMYHALMKAHIRGGKEVHELLNQMKSDK+DEDEET
Sbjct: 423 LGENGSIEEVEAFVGSLRSVIPVNREMYHALMKAHIRGGKEVHELLNQMKSDKLDEDEET 482

Query: 484 KKILGTWQGTTE 496
           KKILGT Q TTE
Sbjct: 483 KKILGTGQETTE 494

[Close]

BLAST of Lcy06g007310 vs. NCBI nr
Match: XP_022954890.1 (pentatricopeptide repeat-containing protein At4g21705, mitochondrial isoform X1 [Cucurbita moschata])

HSP 1 Score: 935.6 bits (2417), Expect = 1.7e-268
Identity = 461/493 (93.51%), Postives = 476/493 (96.55%), Query Frame = 0


Query: 4   KLFSKALTRYAIAGRSYHTNRLKKATLYAKISPLGDPSISVEPELDGWVQEGKKVRVAEL 63
           + FSKALTRYA+AGR YHTNRLKKATLYAKISPLGDPS+SVEP LDGWV+EGKKVR+AEL
Sbjct: 3   QFFSKALTRYALAGRFYHTNRLKKATLYAKISPLGDPSVSVEPVLDGWVKEGKKVRIAEL 62

Query: 64  QRIIHDLRKRKRFTQALEVSEWMKKNGVCIFSASEHAVQLDLIGRVRGYLSAESYFNQLK 123
           QRIIHDLRKRKRFTQALEVSEWMKK GVCIFS SEHAVQLDLIGRVRGYLSAESYFNQLK
Sbjct: 63  QRIIHDLRKRKRFTQALEVSEWMKKTGVCIFSPSEHAVQLDLIGRVRGYLSAESYFNQLK 122

Query: 124 EQDQTDKTYGALLNCYVRQRQVDKSLSHLQKMKEMGFATSELTYNDIMCLYTNVGQHEKV 183
           EQDQTDKTYGALLNCYVRQRQV+KSLSHLQKMKEMGFATSELTYND+MCLYTNVGQH+KV
Sbjct: 123 EQDQTDKTYGALLNCYVRQRQVEKSLSHLQKMKEMGFATSELTYNDMMCLYTNVGQHDKV 182

Query: 184 PEVLAEMKEKNVSPDNFSYRICINSYGARRDLEGMENVLKEMESQPHIVMDWNTYAVVAN 243
           PEVLAEMKEKNVSPDNFSYRICINSYGARRDLEGMENVLKEMESQPHIVMDWNTYAVVAN
Sbjct: 183 PEVLAEMKEKNVSPDNFSYRICINSYGARRDLEGMENVLKEMESQPHIVMDWNTYAVVAN 242

Query: 244 FFIKAGLTDKAVDALSKSEERLKSKDRIGHNHLISLYATLGNKEKVLRLWNLDKSDSTRF 303
           FFIKA L DKAVDAL K+EERLKSKDRIGHNHLISLYATLGNKEKVLRLWNLDK+D+TR 
Sbjct: 243 FFIKADLADKAVDALKKAEERLKSKDRIGHNHLISLYATLGNKEKVLRLWNLDKTDTTRL 302

Query: 304 INRDYITMLESLVRLSELEEAEKVLKEWESSGNCYDFRVPNTVIVGYIDKGMCERAEALL 363
           INRDYITMLESLVRL ELEEAEKVLKEWESSGNCYDFRVPNTVIVGYIDKGMCERAEALL
Sbjct: 303 INRDYITMLESLVRLGELEEAEKVLKEWESSGNCYDFRVPNTVIVGYIDKGMCERAEALL 362

Query: 364 EDLMEKGKATTPNSWGAVAVQYLDRGETEKAVECMKAALSLNMDKGWKPNLRVITGILNW 423
           EDLMEKGK TTPN WGAVAVQY+DR ETEK+VECMKAAL+LNMDKGWKPNLRVITGILNW
Sbjct: 363 EDLMEKGKTTTPNCWGAVAVQYMDRSETEKSVECMKAALTLNMDKGWKPNLRVITGILNW 422

Query: 424 LGDKGSIEEVEAFVGSLRSVIPVNREMYHALMKAHIRGGKEVHELLNQMKSDKIDEDEET 483
           LG+  SIEEVEAFVGSLRSVIPVNREMYHALMKAHIRGGKEVHELLNQMKSDKIDEDEET
Sbjct: 423 LGENASIEEVEAFVGSLRSVIPVNREMYHALMKAHIRGGKEVHELLNQMKSDKIDEDEET 482

Query: 484 KKILGTWQGTTEG 497
           KKILGT Q TTEG
Sbjct: 483 KKILGTGQETTEG 495

[Close]

BLAST of Lcy06g007310 vs. NCBI nr
Match: KAG6573262.1 (Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 933.7 bits (2412), Expect = 6.5e-268
Identity = 460/494 (93.12%), Postives = 476/494 (96.36%), Query Frame = 0


Query: 4   KLFSKALTRYAIAGRSYHTNRLKKATLYAKISPLGDPSISVEPELDGWVQEGKKVRVAEL 63
           + FSKALTRYA+AGR YHTNRLKKATLYAKISPLGDPS+SVEP LDGWV+EGKKVR+AEL
Sbjct: 3   QFFSKALTRYALAGRFYHTNRLKKATLYAKISPLGDPSVSVEPVLDGWVKEGKKVRIAEL 62

Query: 64  QRIIHDLRKRKRFTQALEVSEWMKKNGVCIFSASEHAVQLDLIGRVRGYLSAESYFNQLK 123
           QRIIHDLRKRKRFTQALEVSEWMKK GVCIFS SEHAVQLDLIGRVRGYLSAESYFNQLK
Sbjct: 63  QRIIHDLRKRKRFTQALEVSEWMKKTGVCIFSPSEHAVQLDLIGRVRGYLSAESYFNQLK 122

Query: 124 EQDQTDKTYGALLNCYVRQRQVDKSLSHLQKMKEMGFATSELTYNDIMCLYTNVGQHEKV 183
           EQDQTDKTYGALLNCYVRQRQV+KSLSHLQKMKEMGFATSELTYND+MCLYTNVGQH+KV
Sbjct: 123 EQDQTDKTYGALLNCYVRQRQVEKSLSHLQKMKEMGFATSELTYNDMMCLYTNVGQHDKV 182

Query: 184 PEVLAEMKEKNVSPDNFSYRICINSYGARRDLEGMENVLKEMESQPHIVMDWNTYAVVAN 243
           PEVLAEMKEKNVSPDNFSYRICINSYGARRDLEGMENVLKEMESQPHIVMDWNTYAVVAN
Sbjct: 183 PEVLAEMKEKNVSPDNFSYRICINSYGARRDLEGMENVLKEMESQPHIVMDWNTYAVVAN 242

Query: 244 FFIKAGLTDKAVDALSKSEERLKSKDRIGHNHLISLYATLGNKEKVLRLWNLDKSDSTRF 303
           FFIKA L DKAVDAL K+E RLKSKDRIGHNHLISLYATLGNKEKVLRLWNLDK+D+TR 
Sbjct: 243 FFIKADLADKAVDALKKAEVRLKSKDRIGHNHLISLYATLGNKEKVLRLWNLDKTDTTRL 302

Query: 304 INRDYITMLESLVRLSELEEAEKVLKEWESSGNCYDFRVPNTVIVGYIDKGMCERAEALL 363
           INRDYITMLESLVRL ELEEAEKVLKEWESSGNCYDFRVPNTVIVGYIDKGMCERAEALL
Sbjct: 303 INRDYITMLESLVRLGELEEAEKVLKEWESSGNCYDFRVPNTVIVGYIDKGMCERAEALL 362

Query: 364 EDLMEKGKATTPNSWGAVAVQYLDRGETEKAVECMKAALSLNMDKGWKPNLRVITGILNW 423
           EDLMEKGK TTPN WGAVAVQY+DR ETEK+VECMKAAL+LNMDKGWKPNLRVITGILNW
Sbjct: 363 EDLMEKGKTTTPNCWGAVAVQYMDRSETEKSVECMKAALTLNMDKGWKPNLRVITGILNW 422

Query: 424 LGDKGSIEEVEAFVGSLRSVIPVNREMYHALMKAHIRGGKEVHELLNQMKSDKIDEDEET 483
           LG+  SIEEVEAFVGSLRSVIPVNREMYHALMKAHIRGGKEVHELLNQMKSDKIDEDEET
Sbjct: 423 LGENASIEEVEAFVGSLRSVIPVNREMYHALMKAHIRGGKEVHELLNQMKSDKIDEDEET 482

Query: 484 KKILGTWQGTTEGK 498
           KKILGT Q TTEG+
Sbjct: 483 KKILGTGQETTEGR 496

[Close]

BLAST of Lcy06g007310 vs. TAIR 10
Match: AT4G21705.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 619.0 bits (1595), Expect = 3.3e-177
Identity = 302/477 (63.31%), Postives = 374/477 (78.41%), Query Frame = 0


Query: 15  IAGRSYHTNRLKKATLYAKISPLGDPSISVEPELDGWVQEGKKVRVAELQRIIHDLRKRK 74
           IA R Y+TNR+KK TLY+KISPLGDP  SV PEL  WVQ GKKV VAEL RI+HDLR+RK
Sbjct: 12  IASRYYYTNRVKKTTLYSKISPLGDPKSSVYPELQNWVQCGKKVSVAELIRIVHDLRRRK 71

Query: 75  RFTQALEVSEWMKKNGVCIFSASEHAVQLDLIGRVRGYLSAESYFNQLKEQDQTDKTYGA 134
           RF  ALEVS+WM + GVC+FS +EHAV LDLIGRV G+++AE YF  LKEQ + DKTYGA
Sbjct: 72  RFLHALEVSKWMNETGVCVFSPTEHAVHLDLIGRVYGFVTAEEYFENLKEQYKNDKTYGA 131

Query: 135 LLNCYVRQRQVDKSLSHLQKMKEMGFATSELTYNDIMCLYTNVGQHEKVPEVLAEMKEKN 194
           LLNCYVRQ+ V+KSL H +KMKEMGF TS LTYN+IMCLYTN+GQHEKVP+VL EMKE+N
Sbjct: 132 LLNCYVRQQNVEKSLLHFEKMKEMGFVTSSLTYNNIMCLYTNIGQHEKVPKVLEEMKEEN 191

Query: 195 VSPDNFSYRICINSYGARRDLEGMENVLKEMESQPHIVMDWNTYAVVANFFIKAGLTDKA 254
           V+PDN+SYRICIN++GA  DLE +   L++ME +  I MDWNTYAV A F+I  G  D+A
Sbjct: 192 VAPDNYSYRICINAFGAMYDLERIGGTLRDMERRQDITMDWNTYAVAAKFYIDGGDCDRA 251

Query: 255 VDALSKSEERLKSKDRIGHNHLISLYATLGNKEKVLRLWNLDKSDSTRFINRDYITMLES 314
           V+ L  SE RL+ KD  G+NHLI+LYA LG K +VLRLW+L+K    R IN+DY+T+L+S
Sbjct: 252 VELLKMSENRLEKKDGEGYNHLITLYARLGKKIEVLRLWDLEKDVCKRRINQDYLTVLQS 311

Query: 315 LVRLSELEEAEKVLKEWESSGNCYDFRVPNTVIVGYIDKGMCERAEALLEDLMEKGKATT 374
           LV++  L EAE+VL EW+SSGNCYDFRVPNTVI GYI K M E+AEA+LEDL  +GKATT
Sbjct: 312 LVKIDALVEAEEVLTEWKSSGNCYDFRVPNTVIRGYIGKSMEEKAEAMLEDLARRGKATT 371

Query: 375 PNSWGAVAVQYLDRGETEKAVECMKAALSLNM-DKGWKPNLRVITGILNWLGDKGSIEEV 434
           P SW  VA  Y ++G  E A +CMK AL + +  + W+P L ++T +L+W+GD+GS++EV
Sbjct: 372 PESWELVATAYAEKGTLENAFKCMKTALGVEVGSRKWRPGLTLVTSVLSWVGDEGSLKEV 431

Query: 435 EAFVGSLRSVIPVNREMYHALMKAHIR-GGKEVHELLNQMKSDKIDEDEETKKILGT 490
           E+FV SLR+ I VN++MYHAL+KA IR GG+ +  LL +MK DKI+ DEET  IL T
Sbjct: 432 ESFVASLRNCIGVNKQMYHALVKADIREGGRNIDTLLQRMKDDKIEIDEETTVILST 488

[Close]

BLAST of Lcy06g007310 vs. TAIR 10
Match: AT2G20710.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 295.8 bits (756), Expect = 6.4e-80
Identity = 151/404 (37.38%), Postives = 249/404 (61.63%), Query Frame = 0


Query: 29  TLYAKISPLGDPSISVEPELDGWVQEGKKVRVAELQRIIHDLRKRKRFTQALEVSEWMKK 88
           TL  +++  GDPS S+   LDGW+ +G  V+ +EL  II  LRK  RF+ AL++S+WM +
Sbjct: 39  TLQRRVARSGDPSASIIKVLDGWLDQGNLVKTSELHSIIKMLRKFSRFSHALQISDWMSE 98

Query: 89  NGVCIFSASEHAVQLDLIGRVRGYLSAESYFNQLKEQDQTDKTYGALLNCYVRQRQVDKS 148
           + V   S  + A++LDLI +V G   AE +F  +  + +    YGALLNCY  ++ + K+
Sbjct: 99  HRVHEISEGDVAIRLDLIAKVGGLGEAEKFFETIPMERRNYHLYGALLNCYASKKVLHKA 158

Query: 149 LSHLQKMKEMGFATSELTYNDIMCLYTNVGQHEKVPEVLAEMKEKNVSPDNFSYRICINS 208
               Q+MKE+GF    L YN ++ LY   G++  V ++L EM+++ V PD F+    +++
Sbjct: 159 EQVFQEMKELGFLKGCLPYNVMLNLYVRTGKYTMVEKLLREMEDETVKPDIFTVNTRLHA 218

Query: 209 YGARRDLEGMENVLKEMESQPHIVMDWNTYAVVANFFIKAGLTDKAVDALSKSEERLKS- 268
           Y    D+EGME  L   E+   + +DW TYA  AN +IKAGLT+KA++ L KSE+ + + 
Sbjct: 219 YSVVSDVEGMEKFLMRCEADQGLHLDWRTYADTANGYIKAGLTEKALEMLRKSEQMVNAQ 278

Query: 269 KDRIGHNHLISLYATLGNKEKVLRLWNLDKSDSTRFINRDYITMLESLVRLSELEEAEKV 328
           K +  +  L+S Y   G KE+V RLW+L K +   F N  YI+++ +L+++ ++EE EK+
Sbjct: 279 KRKHAYEVLMSFYGAAGKKEEVYRLWSLYK-ELDGFYNTGYISVISALLKMDDIEEVEKI 338

Query: 329 LKEWESSGNCYDFRVPNTVIVGYIDKGMCERAEALLEDLMEKGKATTPNSWGAVAVQYLD 388
           ++EWE+  + +D R+P+ +I GY  KGM E+AE ++  L++K +    ++W  +A+ Y  
Sbjct: 339 MEEWEAGHSLFDIRIPHLLITGYCKKGMMEKAEEVVNILVQKWRVEDTSTWERLALGYKM 398

Query: 389 RGETEKAVECMKAALSLNMDKGWKPNLRVITGILNWLGDKGSIE 432
            G+ EKAVE  K A+ ++   GW+P+  V+   +++L  +  +E
Sbjct: 399 AGKMEKAVEKWKRAIEVS-KPGWRPHQVVLMSCVDYLEGQRDME 440

[Close]

BLAST of Lcy06g007310 vs. TAIR 10
Match: AT1G02150.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 291.2 bits (744), Expect = 1.6e-78
Identity = 153/427 (35.83%), Postives = 253/427 (59.25%), Query Frame = 0


Query: 30  LYAKISPLGDPSISVEPELDGWVQEGKKVRVAELQRIIHDLRKRKRFTQALEVSEWMKKN 89
           +Y KIS +  P +     L+ W + G+K+   EL R++ +LRK KR  QALEV +WM   
Sbjct: 69  IYKKISLMEKPELGAASVLNQWEKAGRKLTKWELCRVVKELRKYKRANQALEVYDWMNNR 128

Query: 90  GVCI-FSASEHAVQLDLIGRVRGYLSAESYFNQLKEQDQTDKTYGALLNCYVRQRQVDKS 149
           G     SAS+ A+QLDLIG+VRG   AE +F QL E  +  + YG+LLN YVR +  +K+
Sbjct: 129 GERFRLSASDAAIQLDLIGKVRGIPDAEEFFLQLPENFKDRRVYGSLLNAYVRAKSREKA 188

Query: 150 LSHLQKMKEMGFATSELTYNDIMCLYTNVGQHEKVPEVLAEMKEKNVSPDNFSYRICINS 209
            + L  M++ G+A   L +N +M LY N+ +++KV  ++ EMK+K++  D +SY I ++S
Sbjct: 189 EALLNTMRDKGYALHPLPFNVMMTLYMNLREYDKVDAMVFEMKQKDIRLDIYSYNIWLSS 248

Query: 210 YGARRDLEGMENVLKEMESQPHIVMDWNTYAVVANFFIKAGLTDKAVDALSKSEERLKSK 269
            G+   +E ME V ++M+S   I  +W T++ +A  +IK G T+KA DAL K E R+  +
Sbjct: 249 CGSLGSVEKMELVYQQMKSDVSIYPNWTTFSTMATMYIKMGETEKAEDALRKVEARITGR 308

Query: 270 DRIGHNHLISLYATLGNKEKVLRLWNLDKSDSTRFINRDYITMLESLVRLSELEEAEKVL 329
           +RI +++L+SLY +LGNK+++ R+W++ KS      N  Y  ++ SLVR+ ++E AEKV 
Sbjct: 309 NRIPYHYLLSLYGSLGNKKELYRVWHVYKSVVPSIPNLGYHALVSSLVRMGDIEGAEKVY 368

Query: 330 KEWESSGNCYDFRVPNTVIVGYIDKGMCERAEALLEDLMEKGKATTPNSWGAVAVQYLDR 389
           +EW    + YD R+PN ++  Y+     E AE L + ++E G   + ++W  +AV +  +
Sbjct: 369 EEWLPVKSSYDPRIPNLLMNAYVKNDQLETAEGLFDHMVEMGGKPSSSTWEILAVGHTRK 428

Query: 390 GETEKAVECMKAALSLNMDKGWKPNLRVITGILNWLGDKGSIEEVEAFVGSLRSVIPVNR 449
               +A+ C++ A S      W+P + +++G      ++  +   EA +  LR    +  
Sbjct: 429 RCISEALTCLRNAFSAEGSSNWRPKVLMLSGFFKLCEEESDVTSKEAVLELLRQSGDLED 488

Query: 450 EMYHALM 456
           + Y AL+
Sbjct: 489 KSYLALI 495

[Close]

BLAST of Lcy06g007310 vs. TAIR 10
Match: AT4G01990.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 283.9 bits (725), Expect = 2.5e-76
Identity = 156/473 (32.98%), Postives = 267/473 (56.45%), Query Frame = 0


Query: 16  AGRSYHTNRLKKATLYAKISPLGD-PSISVEPELDGWVQEGKKVRVAELQRIIHDLRKRK 75
           A  S  T   K  ++Y K+S LG      +E  L+ +V EG  V+  +L R   DLRK +
Sbjct: 27  AAASVPTKAKKHRSIYKKLSSLGTRGGGKMEETLNQFVMEGVPVKKHDLIRYAKDLRKFR 86

Query: 76  RFTQALEVSEWMKKNGVCIFSASEHAVQLDLIGRVRGYLSAESYFNQLKEQDQTDKTYGA 135
           +  +ALE+ EWM++  +  F+ S+HA++L+LI + +G  +AE+YFN L +  +   TYG+
Sbjct: 87  QPQRALEIFEWMERKEIA-FTGSDHAIRLNLIAKSKGLEAAETYFNSLDDSIKNQSTYGS 146

Query: 136 LLNCYVRQRQVDKSLSHLQKMKEMGFATSELTYNDIMCLYTNVGQHEKVPEVLAEMKEKN 195
           LLNCY  +++  K+ +H + M ++   ++ L +N++M +Y  +GQ EKVP ++  MKEK+
Sbjct: 147 LLNCYCVEKEEVKAKAHFENMVDLNHVSNSLPFNNLMAMYMGLGQPEKVPALVVAMKEKS 206

Query: 196 VSPDNFSYRICINSYGARRDLEGMENVLKEMESQPHIVMDWNTYAVVANFFIKAGLTDKA 255
           ++P + +Y + I S G+ +DL+G+E VL EM+++   +  WNT+A +A  +IK GL  KA
Sbjct: 207 ITPCDITYSMWIQSCGSLKDLDGVEKVLDEMKAEGEGIFSWNTFANLAAIYIKVGLYGKA 266

Query: 256 VDALSKSEERLKSKDRIGHNHLISLYATLGNKEKVLRLWNLDKSDSTRFINRDYITMLES 315
            +AL   E  +    R  ++ LI+LY  + N  +V R+W+L K       N  Y+TML +
Sbjct: 267 EEALKSLENNMNPDVRDCYHFLINLYTGIANASEVYRVWDLLKKRYPNVNNSSYLTMLRA 326

Query: 316 LVRLSELEEAEKVLKEWESSGNCYDFRVPNTVIVGYIDKGMCERAEALLEDLMEKGKATT 375
           L +L +++  +KV  EWES+   YD R+ N  I  Y+ + M E AEA+    M+K K   
Sbjct: 327 LSKLDDIDGVKKVFAEWESTCWTYDMRMANVAISSYLKQNMYEEAEAVFNGAMKKCKGQF 386

Query: 376 PNSWGAVAVQYLDRGETEKAVECMKAALSLNMDKGWKPNLRVITGILNWLGDKGSIEEVE 435
             +   + +  L   + + A++  +AA+ L+ DK W  +  +I+       +   ++  E
Sbjct: 387 SKARQLLMMHLLKNDQADLALKHFEAAV-LDQDKNWTWSSELISSFFLHFEEAKDVDGAE 446

Query: 436 AFVGSLRSVIPVNREMYHALMKAHIRGGKEVHELLNQMKSDKIDEDEETKKIL 488
            F  +L    P++ E Y  LMK ++  GK   ++  +++   I  DEE + +L
Sbjct: 447 EFCKTLTKWSPLSSETYTLLMKTYLAAGKACPDMKKRLEEQGILVDEEQECLL 497

[Close]

BLAST of Lcy06g007310 vs. TAIR 10
Match: AT1G60770.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 271.6 bits (693), Expect = 1.3e-72
Identity = 142/469 (30.28%), Postives = 257/469 (54.80%), Query Frame = 0


Query: 22  TNRLKKATLYAKISPLGDPSISVEPELDGWVQEGKKVRVAELQRIIHDLRKRKRFTQALE 81
           T +  +  LY ++   G   + V  +L+ +++  K V   E+   I  LR R  +  AL+
Sbjct: 17  TKKYIEEPLYNRLFKDGGTEVKVRQQLNQFLKGTKHVFKWEVGDTIKKLRNRGLYYPALK 76

Query: 82  VSEWMKKNGVCIFSASEHAVQLDLIGRVRGYLSAESYFNQLKEQDQTDKTYGALLNCYVR 141
           +SE M++ G+   + S+ A+ LDL+ + R   + E+YF  L E  +T+ TYG+LLNCY +
Sbjct: 77  LSEVMEERGM-NKTVSDQAIHLDLVAKAREITAGENYFVDLPETSKTELTYGSLLNCYCK 136

Query: 142 QRQVDKSLSHLQKMKEMGFATSELTYNDIMCLYTNVGQHEKVPEVLAEMKEKNVSPDNFS 201
           +   +K+   L KMKE+    S ++YN +M LYT  G+ EKVP ++ E+K +NV PD+++
Sbjct: 137 ELLTEKAEGLLNKMKELNITPSSMSYNSLMTLYTKTGETEKVPAMIQELKAENVMPDSYT 196

Query: 202 YRICINSYGARRDLEGMENVLKEMESQPHIVMDWNTYAVVANFFIKAGLTDKAVDALSKS 261
           Y + + +  A  D+ G+E V++EM     +  DW TY+ +A+ ++ AGL+ KA  AL + 
Sbjct: 197 YNVWMRALAATNDISGVERVIEEMNRDGRVAPDWTTYSNMASIYVDAGLSQKAEKALQEL 256

Query: 262 EERLKSKDRIGHNHLISLYATLGNKEKVLRLWNLDKSDSTRFINRDYITMLESLVRLSEL 321
           E +   +D   +  LI+LY  LG   +V R+W   +    +  N  Y+ M++ LV+L++L
Sbjct: 257 EMKNTQRDFTAYQFLITLYGRLGKLTEVYRIWRSLRLAIPKTSNVAYLNMIQVLVKLNDL 316

Query: 322 EEAEKVLKEWESSGNCYDFRVPNTVIVGYIDKGMCERAEALLEDLMEKGKATTPNSWGAV 381
             AE + KEW+++ + YD R+ N +I  Y  +G+ ++A  L E    +G      +W   
Sbjct: 317 PGAETLFKEWQANCSTYDIRIVNVLIGAYAQEGLIQKANELKEKAPRRGGKLNAKTWEIF 376

Query: 382 AVQYLDRGETEKAVECMKAALSLNMDKG--WKPNLRVITGILNWLGDKGSIEEVEAFVGS 441
              Y+  G+  +A+ECM  A+S+    G  W P+   +  ++++   K  +   E  +  
Sbjct: 377 MDYYVKSGDMARALECMSKAVSIGKGDGGKWLPSPETVRALMSYFEQKKDVNGAENLLEI 436

Query: 442 LRS-VIPVNREMYHALMKAHIRGGKEVHELLNQMKSDKIDEDEETKKIL 488
           L++    +  E++  L++ +   GK    +  ++K + ++ +E TKK+L
Sbjct: 437 LKNGTDNIGAEIFEPLIRTYAAAGKSHPAMRRRLKMENVEVNEATKKLL 484

The following BLAST results are available for this feature:

BLAST of Lcy06g007310 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q84JR3	4.7e-176	63.31	Pentatricopeptide repeat-containing protein At4g21705, mitochondrial OS=Arabidop...	[more]
Q9SKU6	9.1e-79	37.38	Pentatricopeptide repeat-containing protein At2g20710, mitochondrial OS=Arabidop...	[more]
Q8LPS6	2.2e-77	35.83	Pentatricopeptide repeat-containing protein At1g02150 OS=Arabidopsis thaliana OX...	[more]
Q93WC5	3.6e-75	32.98	Pentatricopeptide repeat-containing protein At4g01990, mitochondrial OS=Arabidop...	[more]
O22714	1.8e-71	30.28	Pentatricopeptide repeat-containing protein At1g60770 OS=Arabidopsis thaliana OX...	[more]

BLAST of Lcy06g007310 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1K124	2.9e-269	92.93	pentatricopeptide repeat-containing protein At4g21705, mitochondrial isoform X1 ...	[more]
A0A6J1GTN5	8.3e-269	93.51	pentatricopeptide repeat-containing protein At4g21705, mitochondrial isoform X1 ...	[more]
A0A6J1CGU2	1.0e-266	91.58	pentatricopeptide repeat-containing protein At4g21705, mitochondrial OS=Momordic...	[more]
A0A5A7UM45	1.4e-255	87.78	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A1S3B5N2	1.4e-255	87.78	pentatricopeptide repeat-containing protein At4g21705, mitochondrial OS=Cucumis ...	[more]

BLAST of Lcy06g007310 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023542644.1	9.1e-270	93.70	pentatricopeptide repeat-containing protein At4g21705, mitochondrial isoform X1 ...	[more]
XP_022994385.1	5.9e-269	92.93	pentatricopeptide repeat-containing protein At4g21705, mitochondrial isoform X1 ...	[more]
KAG7012430.1	7.7e-269	93.70	Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita a...	[more]
XP_022954890.1	1.7e-268	93.51	pentatricopeptide repeat-containing protein At4g21705, mitochondrial isoform X1 ...	[more]
KAG6573262.1	6.5e-268	93.12	Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita a...	[more]

BLAST of Lcy06g007310 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G21705.1	3.3e-177	63.31	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT2G20710.1	6.4e-80	37.38	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G02150.1	1.6e-78	35.83	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT4G01990.1	2.5e-76	32.98	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G60770.1	1.3e-72	30.28	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 165..209 e-value: 7.8E-9 score: 35.6
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 308..335 e-value: 0.049 score: 13.9 coord: 131..160 e-value: 1.6E-4 score: 21.7 coord: 344..370 e-value: 0.06 score: 13.6
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 200..234 e-value: 0.0012 score: 16.9 coord: 131..160 e-value: 5.8E-5 score: 21.0 coord: 166..198 e-value: 1.6E-5 score: 22.8
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 128..162 score: 9.667924
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 163..197 score: 10.040608
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 305..404 e-value: 1.0E-9 score: 40.3 coord: 181..304 e-value: 8.7E-15 score: 57.0
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 405..498 e-value: 6.2E-6 score: 27.8
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 48..175 e-value: 1.8E-11 score: 45.7
IPR011990	Tetratricopeptide-like helical domain superfamily	SUPERFAMILY	48452	TPR-like	coord: 112..405
None	No IPR available	PANTHER	PTHR45717	OS12G0527900 PROTEIN	coord: 17..489
None	No IPR available	PANTHER	PTHR45717:SF20	OS07G0598500 PROTEIN	coord: 17..489
IPR019734	Tetratricopeptide repeat	PROSITE	PS50005	TPR	coord: 375..408 score: 8.4079

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy06g007310.1	Lcy06g007310.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005739	mitochondrion
molecular_function	GO:0005515	protein binding