Lcy06g006970 (gene) Sponge gourd (P93075) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGGATTTGGCGCTTGTAGCGGTGACGTGCTGGGCCATTTGGATGGACAGAATCAAGAAAGCTCATGGAGAAGAAATACCTCCAGTTAGTATTCGAAGCAATTCGATCGCAAATTATTTAGAAGATTATCAAAAGGCTAACCTGATTCCATCAACTTCATTCTGCGGTGACCTCTGCATGCTGGATTCCCCCTAAAGATGGAGTCTTAAAAATTAATGTCGATGCGGCTTGGTCTGCAAACCCCCAAAGAATTGGTCATGGAGCTCTCTTTCGAGATTCAAGAGGTTTTCTGAAGGGAGCCTTGGTGTCGTCGATTGACCTAGATTTTTTACCCCCTTTAGCAGAGTTGAGGGCGATTTTGGATGGTTTGAAGCTGGCTAAACATCTTCTTTGCTCTAAAATCATTTGTGGAATCTGA ATGGAGGATTTGGCGCTTGTAGCGGTGACGTGCTGGGCCATTTGGATGGACAGAATCAAGAAAGCTCATGGAGAAGAAATACCTCCAGTTAGTATTCGAAGCAATTCGATCGCAAATTATTTAGAAGATTATCAAAAGGCTAACCTGATTCCATCAACTTCATTCTGCGATGGAGTCTTAAAAATTAATGTCGATGCGGCTTGGTCTGCAAACCCCCAAAGAATTGGTCATGGAGCTCTCTTTCGAGATTCAAGAGGTTTTCTGAAGGGAGCCTTGGTGTCGTCGATTGACCTAGATTTTTTACCCCCTTTAGCAGAGTTGAGGGCGATTTTGGATGGTTTGAAGCTGGCTAAACATCTTCTTTGCTCTAAAATCATTTGTGGAATCTGA ATGGAGGATTTGGCGCTTGTAGCGGTGACGTGCTGGGCCATTTGGATGGACAGAATCAAGAAAGCTCATGGAGAAGAAATACCTCCAGTTAGTATTCGAAGCAATTCGATCGCAAATTATTTAGAAGATTATCAAAAGGCTAACCTGATTCCATCAACTTCATTCTGCGATGGAGTCTTAAAAATTAATGTCGATGCGGCTTGGTCTGCAAACCCCCAAAGAATTGGTCATGGAGCTCTCTTTCGAGATTCAAGAGGTTTTCTGAAGGGAGCCTTGGTGTCGTCGATTGACCTAGATTTTTTACCCCCTTTAGCAGAGTTGAGGGCGATTTTGGATGGTTTGAAGCTGGCTAAACATCTTCTTTGCTCTAAAATCATTTGTGGAATCTGA MEDLALVAVTCWAIWMDRIKKAHGEEIPPVSIRSNSIANYLEDYQKANLIPSTSFCDGVLKINVDAAWSANPQRIGHGALFRDSRGFLKGALVSSIDLDFLPPLAELRAILDGLKLAKHLLCSKIICGI Homology
BLAST of Lcy06g006970 vs. ExPASy TrEMBL
Match: A0A0Q3GGJ7 (RNase H domain-containing protein OS=Brachypodium distachyon OX=15368 GN=BRADI_2g53033v3 PE=4 SV=2) HSP 1 Score: 75.1 bits (183), Expect = 2.4e-10 Identity = 44/128 (34.38%), Postives = 68/128 (53.12%), Query Frame = 0
BLAST of Lcy06g006970 vs. ExPASy TrEMBL
Match: A0A6J1CK80 (uncharacterized protein LOC111012047 OS=Momordica charantia OX=3673 GN=LOC111012047 PE=4 SV=1) HSP 1 Score: 73.6 bits (179), Expect = 7.0e-10 Identity = 46/133 (34.59%), Postives = 70/133 (52.63%), Query Frame = 0
BLAST of Lcy06g006970 vs. ExPASy TrEMBL
Match: A0A803NM27 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1) HSP 1 Score: 67.0 bits (162), Expect = 6.5e-08 Identity = 44/134 (32.84%), Postives = 64/134 (47.76%), Query Frame = 0
BLAST of Lcy06g006970 vs. ExPASy TrEMBL
Match: A0A803QAH8 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1) HSP 1 Score: 66.6 bits (161), Expect = 8.5e-08 Identity = 44/134 (32.84%), Postives = 64/134 (47.76%), Query Frame = 0
BLAST of Lcy06g006970 vs. ExPASy TrEMBL
Match: A0A6J1DX30 (uncharacterized protein LOC111024874 OS=Momordica charantia OX=3673 GN=LOC111024874 PE=4 SV=1) HSP 1 Score: 64.7 bits (156), Expect = 3.2e-07 Identity = 42/134 (31.34%), Postives = 60/134 (44.78%), Query Frame = 0
BLAST of Lcy06g006970 vs. NCBI nr
Match: XP_024315667.1 (uncharacterized protein LOC112271019 [Brachypodium distachyon] >KQK10208.2 hypothetical protein BRADI_2g53033v3 [Brachypodium distachyon]) HSP 1 Score: 75.1 bits (183), Expect = 5.0e-10 Identity = 44/128 (34.38%), Postives = 68/128 (53.12%), Query Frame = 0
BLAST of Lcy06g006970 vs. NCBI nr
Match: XP_022141766.1 (uncharacterized protein LOC111012047 [Momordica charantia]) HSP 1 Score: 73.6 bits (179), Expect = 1.4e-09 Identity = 46/133 (34.59%), Postives = 70/133 (52.63%), Query Frame = 0
BLAST of Lcy06g006970 vs. NCBI nr
Match: XP_022131661.1 (uncharacterized protein LOC111004786 [Momordica charantia]) HSP 1 Score: 66.6 bits (161), Expect = 1.8e-07 Identity = 44/128 (34.38%), Postives = 61/128 (47.66%), Query Frame = 0
BLAST of Lcy06g006970 vs. NCBI nr
Match: XP_038902513.1 (uncharacterized protein LOC120089172 [Benincasa hispida]) HSP 1 Score: 65.5 bits (158), Expect = 3.9e-07 Identity = 35/76 (46.05%), Postives = 46/76 (60.53%), Query Frame = 0
BLAST of Lcy06g006970 vs. NCBI nr
Match: XP_022158377.1 (uncharacterized protein LOC111024874 [Momordica charantia]) HSP 1 Score: 64.7 bits (156), Expect = 6.7e-07 Identity = 42/134 (31.34%), Postives = 60/134 (44.78%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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