Lcy06g006360 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy06g006360
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	Unknown protein
Location	Chr06: 5988249 .. 5988752 (-)
RNA-Seq Expression	Lcy06g006360
Synteny	Lcy06g006360

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGGAAATCATCCAGGACAAGCAGAAACCGAAGGATGAAGGAGTGTTTCTCGGTAGGGGTGTAAAAAAACCGACCGGACCCGGAGAACCGAACCGAACCGAACCGGTTCTCAAATATTCTTTGCCCGAACATCTTCATCGCTGGCTTAACTTACGCTTAGGGTTCATTCGTACGCGCCGCATCTTCCTCTCCTTCTTCTTCGCTTAGGGTTTTCTGGGTAAAGCCATCTGCCTCTCCTCTCCGCCATCGTCGTTCGACCAGCCGCCGCCGCTCGACCAGCTTTGTTTCATCATCGCCGCCGCTCGACCAGCTTTGTTCGCCATCGTCGCCGCTCGACCAGCTTTGTTCGCCATCGTCGCCGCTCGACCAGCCGTTCAAATTCCTTCAATGAAAAATGAAGAATCCCATCTGGGTTTCACCTCAAATTCCTTCAATCAGCCGCTCGACCCTCGAATATCTTCCCCAATCAAACCCTCCCCTGCGGCCCTGCCCCGATTCTGA

mRNA sequence

ATGGAGGAAATCATCCAGGACAAGCAGAAACCGAAGGATGAAGGAGTGTTTCTCGGTAGGGGTGTAAAAAAACCGACCGGACCCGGAGAACCGAACCGAACCGAACCGGGTTTTCTGGGTAAAGCCATCTGCCTCTCCTCTCCGCCATCGTCGTTCGACCAGCCGCCGCCGCTCGACCAGCTTTGTTTCATCATCGCCGCCGCTCGACCAGCTTTGTTCGCCATCGTCGCCGCTCGACCAGCTTTGTTCGCCATCGTCGCCGCTCGACCAGCCGTTCAAATTCCTTCAATGAAAAATGAAGAATCCCATCTGGGTTTCACCTCAAATTCCTTCAATCAGCCGCTCGACCCTCGAATATCTTCCCCAATCAAACCCTCCCCTGCGGCCCTGCCCCGATTCTGA

Coding sequence (CDS)

ATGGAGGAAATCATCCAGGACAAGCAGAAACCGAAGGATGAAGGAGTGTTTCTCGGTAGGGGTGTAAAAAAACCGACCGGACCCGGAGAACCGAACCGAACCGAACCGGGTTTTCTGGGTAAAGCCATCTGCCTCTCCTCTCCGCCATCGTCGTTCGACCAGCCGCCGCCGCTCGACCAGCTTTGTTTCATCATCGCCGCCGCTCGACCAGCTTTGTTCGCCATCGTCGCCGCTCGACCAGCTTTGTTCGCCATCGTCGCCGCTCGACCAGCCGTTCAAATTCCTTCAATGAAAAATGAAGAATCCCATCTGGGTTTCACCTCAAATTCCTTCAATCAGCCGCTCGACCCTCGAATATCTTCCCCAATCAAACCCTCCCCTGCGGCCCTGCCCCGATTCTGA

Protein sequence

MEEIIQDKQKPKDEGVFLGRGVKKPTGPGEPNRTEPGFLGKAICLSSPPSSFDQPPPLDQLCFIIAAARPALFAIVAARPALFAIVAARPAVQIPSMKNEESHLGFTSNSFNQPLDPRISSPIKPSPAALPRF

Homology

The following BLAST results are available for this feature:

BLAST of Lcy06g006360 vs.


Match Name	E-value	Identity	Description

BLAST of Lcy06g006360 vs.


Match Name	E-value	Identity	Description

BLAST of Lcy06g006360 vs.


Match Name	E-value	Identity	Description

BLAST of Lcy06g006360 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 105..119
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..40
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..19
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 105..133

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy06g006360.1	Lcy06g006360.1	mRNA