Lcy06g005680 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy06g005680
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	Ankyrin repeat-containing protein
Location	Chr06: 5379954 .. 5390533 (-)
RNA-Seq Expression	Lcy06g005680
Synteny	Lcy06g005680

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTTTTGAGTGCATAAGAACTTGGAAAGACACCTATTTGAGAGATGATGAATCAAAATCAAGCACCGGAAAACGAATCCAACAATTCCAATAATTCCAACGTTCCTACAATTCCAAGGATAAGTCAACCGCCGTTGGGTTTTGCAAATCCCACAGCAAAGCATATTACCGGTATGTTTTTATCTACAACCATTCATATATTGGCTTCTTCTTCTTTCAGTTTCAAGGAGATGGAACAAGTAGAATAAATTTGTATTGTATTGATGTGGTGGGTGTAGTACAATCTCTTATATGTAATCCTCTGATTCTCTCTCTTGTGTGTGTTTCACCCGAGAACAATCAAGGACTGGAACGCTTGTTCTTGAGTTTGAAGTTGTCTCAAAGGCGTTGTAGCTTATTCTTGAGATTGAAGTTGTCTCAATGGTTTCGCGAGAGCTTCAAAGAGTCTTTTGATCTTCTGGAAGTATTTTAGGTTCTGAATTCTCTCTGAATTCTTCTATAAGATTTTCAACTTCTGAACTCTCAAAATGAAGTAGAGCTCCCCTATTTATATAGTTCTTCGTGGACATGAGCTTGGGTTTCATTGACTTTGTACCTGACCCATTGGACTTGGGCTTGTTGATCTTGGACCAAGTCATTTGGACTTGAGCTTTATTGATTTTGAGCCTAGTCATTTGGACTTGGGTTTGATTTAAATTGACCCAAATACCGTATAACCCAAATACCATATCACCCAACTTTGATCAAATTAAACTTTAATTATTTGATCAGATGACCATATTGAAGACATGTGGCATTTCAATTTAAGATTCGTCAATTCTTTCTTCAAATTAAAATTGGGACACATGTCAGGTTATAATTGATCCGAAATTTAATTATTTGTAATTTCATCATTAATTTTGAATAATGACGTGACAATTTGTGATTGGCTAAAATTTCTCCTTCAACAATTACATTTTTAGCCCTTGAGATTTGAAATAGATTCCATTTAGGTTCTCGAGTTTTTAAACTCAGTCTCCCTGCCAGTGTTTCTGTTTAATAGAATGTTGTTGTGACATTTTTTTATTAAATTTTTTAAAATTATATATATATATATATATATATATATATTCTTTTTCTCTTTCTTCTTCATCTTCTTCCTCTTCCTATTTCCCCCACACTTTACCTAAATCATAAAAATGTCTTTTGTAGCCATCGTCCACCACCCGCCACCGCTGCCAAAAAAAAAAAAAAATTCCTCTTTTTTTTTTTTTTTTTTCTTTCTCCTTTATGTCACCAGCCAAATTTTGAAACAGAGGAGGTAGCTCCCCCTATCCCAAAGCTTGGATAAAAAATGTATACCTTCTTTGTTGGAAAGAAACCTTTTGGAGATTGGAGGGTAAACTTGAAAGATGGATTTTTGAGAAAGAGGTTATGAGAAAGAGGCTACTTGTGTTATTACTCAAATCTAGCTTTTTGGCTTGATTGGCTTTTTTACAAAAACTTTAAGACACTACTCCTATTTATACTAGTTTCCACCTCCTCAATTTGTGGTTATAATTTTGCCTACACACAACTATAATCTTGTGGCTATAAATGATTCTCTAGAATACAAAATTTTCTCTAACATTCTAGAGAATTCTACTCATATACTCCAAAAGCCTTCCTAGGGGATTTCTCTAGATTTTCACTCTACTTAAAGACATTTCTAGAATTTGGGCTTTTATTTGGGCTAGGCCCAAATATTAAATATCCAAAATCAAGTTTATATTTCAACACCCCCTCTTAAACTTGATTTTGTTAATACCATCAAATCTCTTAACCTCATGAGGTCTTCTTTTCGATTTCCTTTTGATTTTGTAAACCCACTTCACATCGATCGCCTTGTGCCCTTTTGGAAGTGAGACTAGCTCCCATGTGTCATTCTTCTTGATCGCCTTGGTCTCTTCATCCATGGCGCTTTTCCAATTTTTGTTTTTCACTGCTTCTTGGAAGTTCATGGGCTCATAGTCGGCAAAAAGACAAAAGAGAGTAAGATTATCATGATTTTCAGTTACCTCATAGAGTTCTTGTAATCTTCTGAAACGTGGAATCCTTTCACTTGAGTTCTCATCTTCTTGAGAACTTGTAGTCGTTGGTGAAGCTGTTGGAGTAGAAGGCTCCTCTCTTGTTTGCTCCATCATTGTTTGCTCCATGTCATTTTCTTCGAAGTATGGAAGGAAGTTGTAGTCTTCATCACGTTGTCCCCAATCCCATGCTCCTTCTTCATCGAATATTACATCTCGACTAATTATTGTTTTTCTAGTATTAGGATTGTAGAGCTTGTAGCCTTTAGTGTTGGAATCATAGCCGATGAATATGTACTTCTCACTTTTATCATCCAGCTTACTTCTCTTTTCATCTGGAATGTGCACATGAGCAATACTTCCAAAGACTCTGAGATGAAAAATCCCAGGCTTCCTTCCGCTCCAGGCTTCTTGTGGTGTTTTTCCATTTACGCTTCTTGTTGGAGATCGGTTGGATAGGTAGACTGCACATGCCACTGCTTCTGCCCATAACTCCTTTGGTAGCTTCTTGCTTTTGAGCATACTTCTTGCCATGTTGAGAATTGTTCTGTTCTTTCTTTCTGCCACTCCATTTTGTTGGGGAGATCTTGGCACTGTTAAGGGTCGTCGAATTCCATGGTCTTCACAATATTTCTGGAATTCATTTGATGTGAACTCTCCTCCACGATCAGATCTTATGGCCTTGATGACTAAGCCACTTTCTTTCTCAACAAGGGCTTTGAACCTTTTGAAATTCTCGAACACCTCTGACTTATGCTTCAAGAAATACACCCATGTTTTTCTTGAAAAATCATCAATAAAGAGAAGGAAATAGTTACTCTTACCGAGTGAGCTTGGCTTGATTGGACCGCACACATCCGTATGAATGAGTTCTAAAGGCCTTTGAGCTCTTGAGTTGGACTCTTTCGGGAAGCTTTTCTTGAATTGCTTTCCAAGTAGGCATCCTTCGCACACTTGATCAGGATGGCTGATGGAAGGTAATCCTCTCACCATGTTCTTCTTGGAGAGCGATTCTAATCCTCCAAAATTGAGATGCCCAAATCGAAGATGCCAAAGCCAAGATGCATCTTTATAACACATCTTCAAGCATTTTGCTACGTCGTTTTGAATGTTAAGTATAAACATTCTATTTTTTGTCATTGGCACCTTAGCAATCAGATTATTTGCACTGTCTCTTATATAAAGGTTATTATCTTTTAATTGAATGTCATAACCTTTCTCTAAGAGTTGGCCCAAACTCAAGATATTACTCTTCATACTTGGCACGTAATAAACATTTGAAATAAATTGATGCTCACCATTCTTCAATCGGATAAGAATGTTACCTCTGAAGGGAATAAAAGTCCCCACGCAGCGGAAGCGAATCGATTGGACCTTACGCCGTATATTAATTAACATTAAAATACCGTTACGATAACTCAAACAAAACTTTAAACAACCTTTAAAGCCGCTGTAAAATTGGTTTAAACATGCTAAAATAAATCTAAATTTATTTTTAATACTTTTCTAAAGAAAAGAGGAAGAACCGTTTCAAACCTTCGTTGAAGACTTGACCGTTCTTCGCCAACGACGCTCCACGAACGAAAACGCAGCAGCCGCCTTTGTTTTTCTTCGCTGGAAATTTCTTCTTTGATTGACACAATCACCACAGAGGTTACACCGGTATGTCTCTAAGTCTAGGAGGCAAAAGACTTGTGGGAGTCTTTCTCTAAGAGGGAGGCTAGAGAGAATTCTAGGTCTTGTCTTTGAGAGTCTAAGAGCAAGAGCAAGAGTGTCAGGTCCTGACCAATTAGGTCTAGTGTTCTATTTATAGAAGAGAGGCCATGAATAAAATATTCAATTAAATCAATCTTTTCCAAAATTGATTCAATCTTATTCCTTAATTAATCAATCATGATCAATCAATTCCCTAATTGATTAATCTTTTCCATAAATGACTAATTACTTCCATAAATGACTAATTACTTTCATAAGTGATTAGATCATTCCCATAAATGATTAATCACTTCCTTAAGTGATTAATTATTTACATAATTGATTAATTCATGGTTAATGAATTCTTTAATTAATTAACCACCAATTAAATATCACATATTTAATTTCCGGCCTTGAATTAATTAATTTTACCCAAACACATTTTAGGACTTAAATTAATTAATTCATTATTTGAACTCTTTCAATCTTCCATAAATCTATATTTGAACTTCTTCAAATATTTAATTTCTCTCATAATAATATATCAATATATATTATATTTGTTTCCCTTAGTAAATTGAACATTTTCAATTTACATTTATTACTTAGTTGCCTCAAATTACTTTATGAGCTACCAGTGGGACCTAATGGACCTGCAGATCAGAAGCTCCAACGATGTGAGATTAATTGGTCAAACTCATTAACCACATTAATCAATATTCGTTAACTGTGTGTTCATTCCACTATAGACTCACAGTTGCACTCTTCTCACTGCAGACATATTTTCTGTGTCCACGGATATAGACCAATATCGACTAGTTAGTCCTTCACGAGTGTCCGTAACACCAGCTGGGTCAAATTACCGTTTTACCCCTGGGTTACTTCTATTTCCTTAAGTACCAATTCTCCTCTAATGAACAACCTGTTTGTGGTCCAACCATCAAACAGAAAACCCTCTCGTGCCATTGAGAGGGTAGGGCCCTTTGTTCAAGACTCGGAGTAACCACTTAAGGGAACACTCATCTGCTTCCCTAAAGTCGGGAAGGAGTGAATTCCATCTTGTACAATTATGTTCCCAGCTCCCCATTCGGTCTTGTCCCCAAAGTGGTAGGCTTATTGAGTCGGCGTATTGGCCACTCTCACCCATACAAATCAAAGGACAATCTCTCATGAGCAGGAGTCCATAATCAACTCAGGATTGAGACTAAGTTGTCTAGGTCGTCCTAGTGAAATAGAAAACCAACTAGTTAACGGTGTTATAACCGGTGGTTACTATTTCGCGGTCCGGTCTTATGCAAACTCATTGCATAGGATACCCCCACTCGCATGTCTCCTACACGAACGCGTTGGATCGCAGCGTTTGTATCAAATACAAAGTGAGCCGTATCCATAGTGTCACCAGGATAAGGCACCCAGTCTTATCCCTATACTATAGACCCTTTAGGCTGTTTCTTGAACAATGATCCCATATGTCGCTACATATAGTTCAAGACTCATATTACAGCCTTGGATGTCTAGTTTATTGGATTAGGGTTATTATTAGGCAAAGACAAATATAAAATAACTAATAACAATTAATGGAAAAATATATCAATATTATTTCATTAATATCCGGTCAACAGTTACATTCACTATCTACGAGTTTTAGGGCATAAAACCCAACAACCTCTTCCTTTTACTTCCACCTTGGATTCATCTTCGAAGGCTACATTGCCGCTCACCGATTCATCAAGTTCCACGAACATGCTCCTTTTTCCACACATATGGTTGCTTGCTCCAGTGTCTAGATACCATTTGTTATTTTTGTTCCATTCATTGTCCGTGCAAGCCATTAATAAGGTGTCACATTCTTGACTCCTTTCAATGAAGTTTGCCTTCTCTTCAACTTTTTTGTTGCTAGGAGCTCTACATTCAGAGGCATAATGACCAAACTTCTGGCAATTGTAGCATTTAATATTTGATTTATCGTACCTTGATCTTGAGTTGCCTGGCCCACGACCTCTTGTTGAGTTTTCTCCTCTTTGGAAATTTTTGTTGTCTTCATAGGGTCTCCAACCTCGTCCTCGTCCTTGTCCTTGCCCATGACCTCTTCCTCGTCCTCGATGTCCACCATGACCTCGTCCTCGTTGGCCTCTATCACTCTGACTAACTCCTCCAGTAGGTGAGTCAACTTGCAGCTTGAGTAATTGGTCCACGATTCCTTCCTTCTTCTTTTTCTTTTCTTCGTATGCTTGTAACGATCCCAAGAGTTGCTCAATGGTCATAGCATTCAAGTCTTTTGTTTCTTCGATTATGGCAACAATATGTTCAAACTTTGGATCTAAAGATCTTAATATTTTCTCCATGATTTTTACATCATCAAGCTTTTCACCATTCCTCTTAAGTTGATTGGTGACCGTTAAAACTCTAGAAAAATAGTCGGAGATGGCTTCCCCTTCTTTCATATTCAAAGTTTCAAACTCAGCTCTTAAAGTTTGAAGACGTACCTTCTTGACGGGATCCGCTCCCTTGTATGATGTTTGAAGTTTCTCCCATGCTTCTTTCGCTGTCTTTGCTTCTGAAATCTTCTCAAAAGCATCGTCATTTAATCCTTGATAGATTAGATAGAGAGCTTTCTTGTCTCTCTTTCTTGAGTATCTCAAACCATCCCTTTGTGCTTGAGAAAGACTATCATTCTCTGACTCGGTGTATCCTTTCTCTACTATCTCCCACACGTCTTGCGAACCAAGGAGAGCCTTCATCTTGATGCTCCAATTATCATAGTTGCTCTTGTTGAGCATTGGAACTTGGAATGGCACCATGCCGTTGCTAGCCATCTTCTTAGCAAGGATCTTCAAGCTCTGATACCACTTTGTTGGAAAGAAACCTTTTGGAGATTGGAGGGTAAACTTGAAAGATGGATTTTTGAGAAAGAGGTTATGAGAAAGAGGCTACTTGTGTTATTACTCAAATCTAGCTTTTTGGCTTGATTGGCTTTTTTACAAAAACTTTAAGACACTACTCCTATTTATACTAGTTTCCACCTCCTCAATTTGTGGTTATAATTTTGCCAACACACAACTATAATCTTGTGGCTATAAATGATTCTCTAGAATACAAAATTTTCTCTAACATTCTAGAGAATTCTACTCATATACTCCAAAAGCCTTCCTAGGGGATTTCTCTAGATTTTCACTCTACTTAAAGACATTTCTAGAATTTGGGCTTTTATTTGGGCTAGGCCCAAATACTAAATATCCAAAATCAAGTTTATATTTCAACATTTAATACGTAATTAATTAGTAAAGTTTGAATCACAAGCTAGAAGAAGATTCACAAAATAGAATTCAAAACTCAGTAGTTTTATTTGTCTTTTGTCATTTTTTTTTTAATTTTTTTGAGTTCCTCTTATATTTAATATTGATAATTAATGAAAGGAGAACAAATCAAAAGATTAAATTTCGTCCTAATCTATTAAAAAACCTCCATCCTAATTGTTAAGAGACAGCCGGATACTTCACATATCTCCACAATGGTATGATATTGTCCAAAATCCTCATGACATTGCATTTGGTCCACTCAAAAGGCCTCATACCTACTTGTCCTCCCTTATATATCCAACACTAATCCACCAAGATTAATATATTTGAAGAAATTTAAATTTATTAGTTTTAATTTTTTAATTTGATAGTAATTCGGAGAAGAGACATTCTTGATATATATATATATTTTTTTTTGCGAGGGTAATAGTTTGTTTGAGCAGTTTTGAGTTGTTTGGTCTATAATGTGTAGGGAAAAAGAAACTTGAGTTATATGAAGCTGCACTAAAAGGTGATTGGAAGACCGCCAAGTCTATATTCATAGACCAAAAACATTCAATCACAGTGGAAATAAATGAGATGGGAGACACTGCTCTTCATATTGCTGCTGGTGCAAAACATGTTTCTTTTGTTAAAAATTTGGTTGACCTTTCCTCCCCAGAAGACATGGCGGTCCGAAATAGAGTGGGGAATACTGCCCTGACTTTCGCTGCTATATCAGGAGTTGTAAGCATTGCTAAAGCAATGGTTAAGAAGCATTTTTTTCTTCCAAATATTCATCTTCCTAGTAATCCAATTCCACTTTTAACAGCAATAGCCTTCGAACGCAAAGATATGGCTTCCTTCCTTTGGCGTCATACCACTTTTGAATTGTTAAATACTTCTCAACAGCTTGACCTTCTTATTACTGCCATTCGCGTCGATTTTTATGGTTTTCTTCTAACCTTAATATTCTTCCCATTATCAGTTTCAACTCTCTGACCCCATGTATTTAATTTAATACTCTCTCTCTCTCGCTCCCTTCAATTCTTATAGATATAGCTTTGGAAATTGTGGAAAAGAAACCAGCATTAGCAAAGGAACGGATTGAATATGGTGGTGTCACAGCTCTAAAAGTTCTAGCTAGAAAATCAGCCATTGGTAGAAGCGCAAAGTGTTCGCACGTAACTTCGAAGATGGAGACACGTGGAATAAACAATATATTTTATTGATGTTTGTATGCGTGTGGGTGTACAATCTCTAACTTTTATCCTCTGATTCTCTCTCTTATGTGTGTGATTGTGTTTCACTCGAAGGCTGGAACGCTTGATCTCGAGTTTGAAGCTTCAATGGATTCTTGGAGCTTGAAGTCTTCCAGTCTTGAAGGAGTCTTCAATCTTCAAGAAGTGTTGATGTCCTGAAGAGTCTTTGATCTTCAAGGAGTGTTGAAGTCTTGAAGAGTGTTGGGTCTTCAAGGAGTGTTGAAGTCTTGAAGAGTGTTTGGTCTTCAAGAAGTGTTCAACACTTGAACTTATGGATTGCAGAGAGTCTTCGGTCTTCAGACTTGGTGGAGTCTCTCTGAATTCTTTGGTTCTGCTTGAGAGCTTTGAAACTCTGAACTCTTGTCTTGAGTGTAGAATTTCTGAACTGTCTAAAATTTCTGAACCCTTGAAATGGAGGAGAACCCTTCTATTTATAGAGTTCTGGATGGGCCCTGGTGACTTTCGGGCCTAACAACTTGGGCTTGGGCTTTATCGGTCTTGGACTCAACCATTTTAGTCTTGGGTTTGGTTCATATTTGACCCAAAACCATATGACCCAGACATTTAAAAGACCAAAATTTGATCCAATTAATTATTTTGTTAATTAATTGGTCAAATTAATTAATTTGATCAAAATAATTTATTTTCTAATTAATTGATCAAATCGAAATTTGGCTCTTTAAATTTATAATTGACCAACTTTGTCTTCAAATTAAATTTGGGACACATGTCACTTTATAATTGGTCCCAAATTTAATTATTCGTAATTTTGTCATTAATTTTAGATAATGACTTGGCAATTTGTGATTGGACAAAATTTATCCTTCAACACAAAGCTTTGCTTTTGCAAAAGATTCATCAACTCCTGTAATAATAATTGAGCTTTGCTGTTTTGTGTGAATCTACATGAATATATCTATTTTAATTTAATTAATTACTTGCTAGGCTTCAAAAGATTCTACAACAAAGCTTTGATGCAAACTTTAGCGCATCGAATCGTTCAAATTCTATGGGAGCAACGTTTGCGAGAACATTGAAGACGACCGGTCAAATTTTGTTAGAGAATCCGCAGTATTACTGCGTGAGGCTGCAAAAGTTGGAAACGTGGAGTTCCTGATAATACTCGTTCGCTCATATCCGGAACTACTATGGACTGTCGATGCTAACAATAAAACCATATTTCACGTAGCAGTTGAAAATCGACAAGAAAGTGTCTTTGGTTTAATGTATGAGCTAGGAGGACTCAAGGATCTCCTTGTCAATTTTGTTAACAAACAGCCGAACCTCAACATCCTATACTTAGCTGGAAAACTACCTGATCAATGGCATCTATCAATAGAGTCTCCGGAGCAGCTGTTCAAATGCAACGAGAACTTTCGTGGTTTAAGGTACGAGTTTAATTTGGTGCGCTTTAATATATCTTTCTTATTACTGCCTTCCTAATTTACTTTCTAATATCATTGTTAAAGCTATGTAATGTTATGATATCTTGAAGTGGAGAAAATTGTAGTGTGTTCTCATCGTCTGATGAAACATAATGTTGCAAGTCACCTCCTTCCTGGTCAAATCGATTCCTTTACCCAACGCGAGTATTTCACAAAAGAGCACCAGCAACTGCTAAAAGATGGCGAGAAGTGGATGAAGAATACAGCACACTCATGCATGGTGGTGGCAACTTTGATTGCAACCGTAGTTTTTGGAGCAGGGTTCACCATGCCAGGAGGCAATGATGATAAGACTGGCATCCCTATTTTTCGACAAAAGACAGCGTTTTTGGCGTTTGTAATAGCAGATGTTGCAGCTCTCGTGCTTTCTATACTTTCAATACTCACTTTTTTGTCAATCTTGACATCGCGCTATGCAGAAGACGACTTCTTGGTGTCGTTGCCGGCCAAGTTAGTGGTTGGATTGGTGACACTGGCTCTTTCGATGACGTCTATGGTGGCAGCTTTCAGCTCGACCTTTTTCATTGCGTATGATGAAACAAAGTGGATCGCTCCGTGGGTCATAACAGGTATGGCCTTCATTCCAGCTGTGTGGTTTATTATGCTCCACTATAAACTTGTGGTGGATATCGTAAGCTCCTGGTGGCTTAGATTTTCTCTAACACGACGTACAAGGAGGTTGTTTCAAGAGAGTTCGTTGTGTGGATGCTTTTAATTGCTTACAATTATGCTCTATAAGATATCACACATTTCATGTAATGTTGTATAACGCGTTCAGGATTTTATGTGTTTCTTGGTACAATCCGCTCCAGAATTCCTGGAGTTCTTGGCTTAGATTTAGTTTTCAAAAAAAATT

mRNA sequence

TTTTTTGAGTGCATAAGAACTTGGAAAGACACCTATTTGAGAGATGATGAATCAAAATCAAGCACCGGAAAACGAATCCAACAATTCCAATAATTCCAACGTTCCTACAATTCCAAGGATAAGTCAACCGCCGTTGGGTTTTGCAAATCCCACAGCAAAGCATATTACCGGCTTCAAAAGATTCTACAACAAAGCTTTGATGCAAACTTTAGCGCATCGAATCGTTCAAATTCTATGGGAGCAACGTTTGCGAGAACATTGAAGACGACCGGTCAAATTTTGTTAGAGAATCCGCAGTATTACTGCGTGAGGCTGCAAAAGTTGGAAACGTGGAGTTCCTGATAATACTCGTTCGCTCATATCCGGAACTACTATGGACTGTCGATGCTAACAATAAAACCATATTTCACGTAGCAGTTGAAAATCGACAAGAAAGTGTCTTTGGTTTAATGTATGAGCTAGGAGGACTCAAGGATCTCCTTGTCAATTTTGTTAACAAACAGCCGAACCTCAACATCCTATACTTAGCTGGAAAACTACCTGATCAATGGCATCTATCAATAGAGTCTCCGGAGCAGCTGTTCAAATGCAACGAGAACTTTCGTGGTTTAAGGTACGAGTTTAATTTGGTGCGCTTTAATATATCTTTCTTATTACTGCCTTCCTAATTTACTTTCTAATATCATTGTTAAAGCTATGTAATGTTATGATATCTTGAAGTGGAGAAAATTGTAGTGTGTTCTCATCGTCTGATGAAACATAATGTTGCAAGTCACCTCCTTCCTGGTCAAATCGATTCCTTTACCCAACGCGAGTATTTCACAAAAGAGCACCAGCAACTGCTAAAAGATGGCGAGAAGTGGATGAAGAATACAGCACACTCATGCATGGTGGTGGCAACTTTGATTGCAACCGTAGTTTTTGGAGCAGGGTTCACCATGCCAGGAGGCAATGATGATAAGACTGGCATCCCTATTTTTCGACAAAAGACAGCGTTTTTGGCGTTTGTAATAGCAGATGTTGCAGCTCTCGTGCTTTCTATACTTTCAATACTCACTTTTTTGTCAATCTTGACATCGCGCTATGCAGAAGACGACTTCTTGGTGTCGTTGCCGGCCAAGTTAGTGGTTGGATTGGTGACACTGGCTCTTTCGATGACGTCTATGGTGGCAGCTTTCAGCTCGACCTTTTTCATTGCGTATGATGAAACAAAGTGGATCGCTCCGTGGGTCATAACAGGTATGGCCTTCATTCCAGCTGTGTGGTTTATTATGCTCCACTATAAACTTGTGGTGGATATCGTAAGCTCCTGGTGGCTTAGATTTTCTCTAACACGACGTACAAGGAGGTTGTTTCAAGAGAGTTCGTTGTGTGGATGCTTTTAATTGCTTACAATTATGCTCTATAAGATATCACACATTTCATGTAATGTTGTATAACGCGTTCAGGATTTTATGTGTTTCTTGGTACAATCCGCTCCAGAATTCCTGGAGTTCTTGGCTTAGATTTAGTTTTCAAAAAAAATT

Coding sequence (CDS)

ATGAAACATAATGTTGCAAGTCACCTCCTTCCTGGTCAAATCGATTCCTTTACCCAACGCGAGTATTTCACAAAAGAGCACCAGCAACTGCTAAAAGATGGCGAGAAGTGGATGAAGAATACAGCACACTCATGCATGGTGGTGGCAACTTTGATTGCAACCGTAGTTTTTGGAGCAGGGTTCACCATGCCAGGAGGCAATGATGATAAGACTGGCATCCCTATTTTTCGACAAAAGACAGCGTTTTTGGCGTTTGTAATAGCAGATGTTGCAGCTCTCGTGCTTTCTATACTTTCAATACTCACTTTTTTGTCAATCTTGACATCGCGCTATGCAGAAGACGACTTCTTGGTGTCGTTGCCGGCCAAGTTAGTGGTTGGATTGGTGACACTGGCTCTTTCGATGACGTCTATGGTGGCAGCTTTCAGCTCGACCTTTTTCATTGCGTATGATGAAACAAAGTGGATCGCTCCGTGGGTCATAACAGGTATGGCCTTCATTCCAGCTGTGTGGTTTATTATGCTCCACTATAAACTTGTGGTGGATATCGTAAGCTCCTGGTGGCTTAGATTTTCTCTAACACGACGTACAAGGAGGTTGTTTCAAGAGAGTTCGTTGTGTGGATGCTTTTAA

Protein sequence

MKHNVASHLLPGQIDSFTQREYFTKEHQQLLKDGEKWMKNTAHSCMVVATLIATVVFGAGFTMPGGNDDKTGIPIFRQKTAFLAFVIADVAALVLSILSILTFLSILTSRYAEDDFLVSLPAKLVVGLVTLALSMTSMVAAFSSTFFIAYDETKWIAPWVITGMAFIPAVWFIMLHYKLVVDIVSSWWLRFSLTRRTRRLFQESSLCGCF

Homology

[Close]

BLAST of Lcy06g005680 vs. ExPASy Swiss-Prot
Match: Q9C7A2 (Ankyrin repeat-containing protein ITN1 OS=Arabidopsis thaliana OX=3702 GN=ITN1 PE=1 SV=1)

HSP 1 Score: 46.2 bits (108), Expect = 5.3e-04
Identity = 43/155 (27.74%), Postives = 77/155 (49.68%), Query Frame = 0


Query: 24  TKEHQQLLKDGEKWMKNTAHSCMVVATLIATVVFGAGFTMPGGNDDKTGIPIFRQKTAFL 83
           +KE ++L ++G   + N  +S  VVA L ATV F A FT+PGG D+  G  +   + +F 
Sbjct: 404 SKELRKLHREG---INNATNSVTVVAVLFATVAFAAIFTVPGG-DNNDGSAVVVGRASFK 463

Query: 84  AFVIADVAALVLSILSILTFLSILTSRYAEDDFLVSLPAKLVVGLVTLALSMTSMVAAFS 143
            F I +  AL  S+  ++  ++++      +  +V +  KL+        SM + VA  +
Sbjct: 464 IFFIFNALALFTSLAVVVVQITLVRGETKAEKRVVEVINKLM-----WLASMCTSVAFLA 523

Query: 144 STFFIAYDETKWIAPWV-ITGMAFIPAVWFIMLHY 178
           S++ +   + +W A  V + G   +  V   M +Y
Sbjct: 524 SSYIVVGRKNEWAAELVTVVGGVIMAGVLGTMTYY 549

[Close]

BLAST of Lcy06g005680 vs. ExPASy TrEMBL
Match: A0A6J1JYW0 (ankyrin repeat-containing protein At5g02620-like OS=Cucurbita maxima OX=3661 GN=LOC111490095 PE=4 SV=1)

HSP 1 Score: 233.4 bits (594), Expect = 8.6e-58
Identity = 126/189 (66.67%), Postives = 150/189 (79.37%), Query Frame = 0


Query: 14  IDSFTQREYFTKEHQQLLKDGEKWMKNTAHSCMVVATLIATVVFGAGFTMPGGNDDKTGI 73
           +D  T RE FTKEH+QL K GE+WMKNTA+SCM+VATLIATVVF A FT+PGGNDDK GI
Sbjct: 514 VDKLTPRELFTKEHEQLRKQGEEWMKNTANSCMLVATLIATVVFAAAFTVPGGNDDKEGI 573

Query: 74  PIFRQKTAFLAFVIADVAALVLSILSILTFLSILTSRYAEDDFLVSLPAKLVVGLVTLAL 133
           PIFRQ  AF  FVI+DVAALVLS  SILTFLSILTSRYAE+DFLVSLP+KL+ GL+TL +
Sbjct: 574 PIFRQNQAFTVFVISDVAALVLSTTSILTFLSILTSRYAEEDFLVSLPSKLLFGLLTLFV 633

Query: 134 SMTSMVAAFSSTFFIAYDETKWIAPWVITGMAFIPAVWFIMLHYKLVVDIV-SSWWLRFS 193
           S+  MV AFS+ FFIAYD+TK   P  I  +A +P   F + H KLVVDI+ S++W +FS
Sbjct: 634 SIACMVVAFSAAFFIAYDKTKAKIPLAIGAVAILPVGCFCVFHSKLVVDILRSAYWSKFS 693

Query: 194 LTRRTRRLF 202
           L +R +RLF
Sbjct: 694 LRQREKRLF 702

[Close]

BLAST of Lcy06g005680 vs. ExPASy TrEMBL
Match: A0A6J1GTF5 (ankyrin repeat-containing protein ITN1-like OS=Cucurbita moschata OX=3662 GN=LOC111456952 PE=4 SV=1)

HSP 1 Score: 233.4 bits (594), Expect = 8.6e-58
Identity = 126/189 (66.67%), Postives = 150/189 (79.37%), Query Frame = 0


Query: 14  IDSFTQREYFTKEHQQLLKDGEKWMKNTAHSCMVVATLIATVVFGAGFTMPGGNDDKTGI 73
           +D  T RE FTKEH+QL K GE+WMKNTA+SCM+VATLIATVVF A FT+PGGNDDK GI
Sbjct: 514 VDKLTPRELFTKEHEQLRKQGEEWMKNTANSCMLVATLIATVVFAAAFTVPGGNDDKEGI 573

Query: 74  PIFRQKTAFLAFVIADVAALVLSILSILTFLSILTSRYAEDDFLVSLPAKLVVGLVTLAL 133
           PIFRQ  AF  FVI+DVAALVLS  SILTFLSILTSRYAE+DFLVSLP+KL+ GL+TL +
Sbjct: 574 PIFRQNQAFTVFVISDVAALVLSTTSILTFLSILTSRYAEEDFLVSLPSKLLFGLLTLFV 633

Query: 134 SMTSMVAAFSSTFFIAYDETKWIAPWVITGMAFIPAVWFIMLHYKLVVDIV-SSWWLRFS 193
           S+  MV AFS+ FFIAYD+TK   P  I  +A +P   F + H KLVVDI+ S++W +FS
Sbjct: 634 SIACMVVAFSAAFFIAYDKTKAKIPLAIGAVAILPVGCFCVFHSKLVVDILRSAYWSKFS 693

Query: 194 LTRRTRRLF 202
           L +R +RLF
Sbjct: 694 LRQREKRLF 702

[Close]

BLAST of Lcy06g005680 vs. ExPASy TrEMBL
Match: A0A5A7UP28 (Ankyrin repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold80G002410 PE=4 SV=1)

HSP 1 Score: 231.1 bits (588), Expect = 4.3e-57
Identity = 125/190 (65.79%), Postives = 147/190 (77.37%), Query Frame = 0


Query: 13  QIDSFTQREYFTKEHQQLLKDGEKWMKNTAHSCMVVATLIATVVFGAGFTMPGGNDDKTG 72
           + +  T RE FTKEH+ LLKDGE+WMKNTA+SCM+VATLIATVVF A FT+PGGNDDK+G
Sbjct: 510 RFEELTPRELFTKEHKSLLKDGEEWMKNTANSCMLVATLIATVVFAAAFTVPGGNDDKSG 569

Query: 73  IPIFRQKTAFLAFVIADVAALVLSILSILTFLSILTSRYAEDDFLVSLPAKLVVGLVTLA 132
            P FRQ  AF  FVI DVAALV S  SILTFLSILTSRYAEDDFL+SLP KL+ GLVTL 
Sbjct: 570 TPNFRQNQAFTVFVITDVAALVFSTTSILTFLSILTSRYAEDDFLMSLPIKLLFGLVTLF 629

Query: 133 LSMTSMVAAFSSTFFIAYDETKWIAPWVITGMAFIPAVWFIMLHYKLVVDIV-SSWWLRF 192
           LS++ MV AFS+TFFIAYD+TK   P  I  ++ +P V F + H KLVVDI  S +W +F
Sbjct: 630 LSISCMVVAFSATFFIAYDKTKQNIPLAIAIVSIVPVVCFCLFHSKLVVDIFRSGYWAQF 689

Query: 193 SLTRRTRRLF 202
           SL +  +RLF
Sbjct: 690 SLKKHKKRLF 699

[Close]

BLAST of Lcy06g005680 vs. ExPASy TrEMBL
Match: A0A5D3BLW8 (Ankyrin repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G005400 PE=4 SV=1)

HSP 1 Score: 231.1 bits (588), Expect = 4.3e-57
Identity = 125/190 (65.79%), Postives = 147/190 (77.37%), Query Frame = 0


Query: 13  QIDSFTQREYFTKEHQQLLKDGEKWMKNTAHSCMVVATLIATVVFGAGFTMPGGNDDKTG 72
           + +  T RE FTKEH+ LLKDGE+WMKNTA+SCM+VATLIATVVF A FT+PGGNDDK+G
Sbjct: 513 RFEELTPRELFTKEHKSLLKDGEEWMKNTANSCMLVATLIATVVFAAAFTVPGGNDDKSG 572

Query: 73  IPIFRQKTAFLAFVIADVAALVLSILSILTFLSILTSRYAEDDFLVSLPAKLVVGLVTLA 132
            P FRQ  AF  FVI DVAALV S  SILTFLSILTSRYAEDDFL+SLP KL+ GLVTL 
Sbjct: 573 TPNFRQNQAFTVFVITDVAALVFSTTSILTFLSILTSRYAEDDFLMSLPIKLLFGLVTLF 632

Query: 133 LSMTSMVAAFSSTFFIAYDETKWIAPWVITGMAFIPAVWFIMLHYKLVVDIV-SSWWLRF 192
           LS++ MV AFS+TFFIAYD+TK   P  I  ++ +P V F + H KLVVDI  S +W +F
Sbjct: 633 LSISCMVVAFSATFFIAYDKTKQNIPLAIAIVSIVPVVCFCLFHSKLVVDIFRSGYWAQF 692

Query: 193 SLTRRTRRLF 202
           SL +  +RLF
Sbjct: 693 SLKKHKKRLF 702

[Close]

BLAST of Lcy06g005680 vs. ExPASy TrEMBL
Match: A0A1S3B2F0 (ankyrin repeat-containing protein At5g02620-like OS=Cucumis melo OX=3656 GN=LOC103485059 PE=4 SV=1)

HSP 1 Score: 231.1 bits (588), Expect = 4.3e-57
Identity = 125/190 (65.79%), Postives = 147/190 (77.37%), Query Frame = 0


Query: 13  QIDSFTQREYFTKEHQQLLKDGEKWMKNTAHSCMVVATLIATVVFGAGFTMPGGNDDKTG 72
           + +  T RE FTKEH+ LLKDGE+WMKNTA+SCM+VATLIATVVF A FT+PGGNDDK+G
Sbjct: 539 RFEELTPRELFTKEHKSLLKDGEEWMKNTANSCMLVATLIATVVFAAAFTVPGGNDDKSG 598

Query: 73  IPIFRQKTAFLAFVIADVAALVLSILSILTFLSILTSRYAEDDFLVSLPAKLVVGLVTLA 132
            P FRQ  AF  FVI DVAALV S  SILTFLSILTSRYAEDDFL+SLP KL+ GLVTL 
Sbjct: 599 TPNFRQNQAFTVFVITDVAALVFSTTSILTFLSILTSRYAEDDFLMSLPIKLLFGLVTLF 658

Query: 133 LSMTSMVAAFSSTFFIAYDETKWIAPWVITGMAFIPAVWFIMLHYKLVVDIV-SSWWLRF 192
           LS++ MV AFS+TFFIAYD+TK   P  I  ++ +P V F + H KLVVDI  S +W +F
Sbjct: 659 LSISCMVVAFSATFFIAYDKTKQNIPLAIAIVSIVPVVCFCLFHSKLVVDIFRSGYWAQF 718

Query: 193 SLTRRTRRLF 202
           SL +  +RLF
Sbjct: 719 SLKKHKKRLF 728

[Close]

BLAST of Lcy06g005680 vs. NCBI nr
Match: KAG6573174.1 (Ankyrin repeat-containing protein ITN1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 233.4 bits (594), Expect = 1.8e-57
Identity = 126/189 (66.67%), Postives = 150/189 (79.37%), Query Frame = 0


Query: 14  IDSFTQREYFTKEHQQLLKDGEKWMKNTAHSCMVVATLIATVVFGAGFTMPGGNDDKTGI 73
           +D  T RE FTKEH+QL K GE+WMKNTA+SCM+VATLIATVVF A FT+PGGNDDK GI
Sbjct: 518 VDKLTPRELFTKEHEQLRKQGEEWMKNTANSCMLVATLIATVVFAAAFTVPGGNDDKEGI 577

Query: 74  PIFRQKTAFLAFVIADVAALVLSILSILTFLSILTSRYAEDDFLVSLPAKLVVGLVTLAL 133
           PIFRQ  AF  FVI+DVAALVLS  SILTFLSILTSRYAE+DFLVSLP+KL+ GL+TL +
Sbjct: 578 PIFRQNQAFTVFVISDVAALVLSTTSILTFLSILTSRYAEEDFLVSLPSKLLFGLLTLFV 637

Query: 134 SMTSMVAAFSSTFFIAYDETKWIAPWVITGMAFIPAVWFIMLHYKLVVDIV-SSWWLRFS 193
           S+  MV AFS+ FFIAYD+TK   P  I  +A +P   F + H KLVVDI+ S++W +FS
Sbjct: 638 SIACMVVAFSAAFFIAYDKTKAKIPLAIGAVAILPVGCFCVFHSKLVVDILRSAYWSKFS 697

Query: 194 LTRRTRRLF 202
           L +R +RLF
Sbjct: 698 LRQREKRLF 706

[Close]

BLAST of Lcy06g005680 vs. NCBI nr
Match: XP_022954800.1 (ankyrin repeat-containing protein ITN1-like [Cucurbita moschata])

HSP 1 Score: 233.4 bits (594), Expect = 1.8e-57
Identity = 126/189 (66.67%), Postives = 150/189 (79.37%), Query Frame = 0


Query: 14  IDSFTQREYFTKEHQQLLKDGEKWMKNTAHSCMVVATLIATVVFGAGFTMPGGNDDKTGI 73
           +D  T RE FTKEH+QL K GE+WMKNTA+SCM+VATLIATVVF A FT+PGGNDDK GI
Sbjct: 514 VDKLTPRELFTKEHEQLRKQGEEWMKNTANSCMLVATLIATVVFAAAFTVPGGNDDKEGI 573

Query: 74  PIFRQKTAFLAFVIADVAALVLSILSILTFLSILTSRYAEDDFLVSLPAKLVVGLVTLAL 133
           PIFRQ  AF  FVI+DVAALVLS  SILTFLSILTSRYAE+DFLVSLP+KL+ GL+TL +
Sbjct: 574 PIFRQNQAFTVFVISDVAALVLSTTSILTFLSILTSRYAEEDFLVSLPSKLLFGLLTLFV 633

Query: 134 SMTSMVAAFSSTFFIAYDETKWIAPWVITGMAFIPAVWFIMLHYKLVVDIV-SSWWLRFS 193
           S+  MV AFS+ FFIAYD+TK   P  I  +A +P   F + H KLVVDI+ S++W +FS
Sbjct: 634 SIACMVVAFSAAFFIAYDKTKAKIPLAIGAVAILPVGCFCVFHSKLVVDILRSAYWSKFS 693

Query: 194 LTRRTRRLF 202
           L +R +RLF
Sbjct: 694 LRQREKRLF 702

[Close]

BLAST of Lcy06g005680 vs. NCBI nr
Match: XP_022994346.1 (ankyrin repeat-containing protein At5g02620-like [Cucurbita maxima])

HSP 1 Score: 233.4 bits (594), Expect = 1.8e-57
Identity = 126/189 (66.67%), Postives = 150/189 (79.37%), Query Frame = 0


Query: 14  IDSFTQREYFTKEHQQLLKDGEKWMKNTAHSCMVVATLIATVVFGAGFTMPGGNDDKTGI 73
           +D  T RE FTKEH+QL K GE+WMKNTA+SCM+VATLIATVVF A FT+PGGNDDK GI
Sbjct: 514 VDKLTPRELFTKEHEQLRKQGEEWMKNTANSCMLVATLIATVVFAAAFTVPGGNDDKEGI 573

Query: 74  PIFRQKTAFLAFVIADVAALVLSILSILTFLSILTSRYAEDDFLVSLPAKLVVGLVTLAL 133
           PIFRQ  AF  FVI+DVAALVLS  SILTFLSILTSRYAE+DFLVSLP+KL+ GL+TL +
Sbjct: 574 PIFRQNQAFTVFVISDVAALVLSTTSILTFLSILTSRYAEEDFLVSLPSKLLFGLLTLFV 633

Query: 134 SMTSMVAAFSSTFFIAYDETKWIAPWVITGMAFIPAVWFIMLHYKLVVDIV-SSWWLRFS 193
           S+  MV AFS+ FFIAYD+TK   P  I  +A +P   F + H KLVVDI+ S++W +FS
Sbjct: 634 SIACMVVAFSAAFFIAYDKTKAKIPLAIGAVAILPVGCFCVFHSKLVVDILRSAYWSKFS 693

Query: 194 LTRRTRRLF 202
           L +R +RLF
Sbjct: 694 LRQREKRLF 702

[Close]

BLAST of Lcy06g005680 vs. NCBI nr
Match: XP_023542596.1 (ankyrin repeat-containing protein ITN1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 232.3 bits (591), Expect = 3.9e-57
Identity = 126/189 (66.67%), Postives = 150/189 (79.37%), Query Frame = 0


Query: 14  IDSFTQREYFTKEHQQLLKDGEKWMKNTAHSCMVVATLIATVVFGAGFTMPGGNDDKTGI 73
           +D  T RE FTKEH+QL K GE+WMKNTA+SCM+VATLIATVVF A FT+PGGNDDK GI
Sbjct: 518 VDKLTPRELFTKEHEQLRKQGEEWMKNTANSCMLVATLIATVVFAAAFTVPGGNDDKEGI 577

Query: 74  PIFRQKTAFLAFVIADVAALVLSILSILTFLSILTSRYAEDDFLVSLPAKLVVGLVTLAL 133
           PIFRQ  AF  FVI+DVAALVLS  SILTFLSILTSRYAE+DFLVSLP+KL+ GL+TL +
Sbjct: 578 PIFRQNQAFTVFVISDVAALVLSTTSILTFLSILTSRYAEEDFLVSLPSKLLFGLLTLFV 637

Query: 134 SMTSMVAAFSSTFFIAYDETKWIAPWVITGMAFIPAVWFIMLHYKLVVDIV-SSWWLRFS 193
           S+  MV AFS+ FFIAYD+TK   P  I  +A +P   F + H KLVVDI+ S++W +FS
Sbjct: 638 SIACMVVAFSAAFFIAYDKTKAKIPLGIGAVAILPVGCFCVFHSKLVVDIMRSAYWSKFS 697

Query: 194 LTRRTRRLF 202
           L +R +RLF
Sbjct: 698 LRQREKRLF 706

[Close]

BLAST of Lcy06g005680 vs. NCBI nr
Match: TYJ99325.1 (ankyrin repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 231.1 bits (588), Expect = 8.8e-57
Identity = 125/190 (65.79%), Postives = 147/190 (77.37%), Query Frame = 0


Query: 13  QIDSFTQREYFTKEHQQLLKDGEKWMKNTAHSCMVVATLIATVVFGAGFTMPGGNDDKTG 72
           + +  T RE FTKEH+ LLKDGE+WMKNTA+SCM+VATLIATVVF A FT+PGGNDDK+G
Sbjct: 513 RFEELTPRELFTKEHKSLLKDGEEWMKNTANSCMLVATLIATVVFAAAFTVPGGNDDKSG 572

Query: 73  IPIFRQKTAFLAFVIADVAALVLSILSILTFLSILTSRYAEDDFLVSLPAKLVVGLVTLA 132
            P FRQ  AF  FVI DVAALV S  SILTFLSILTSRYAEDDFL+SLP KL+ GLVTL 
Sbjct: 573 TPNFRQNQAFTVFVITDVAALVFSTTSILTFLSILTSRYAEDDFLMSLPIKLLFGLVTLF 632

Query: 133 LSMTSMVAAFSSTFFIAYDETKWIAPWVITGMAFIPAVWFIMLHYKLVVDIV-SSWWLRF 192
           LS++ MV AFS+TFFIAYD+TK   P  I  ++ +P V F + H KLVVDI  S +W +F
Sbjct: 633 LSISCMVVAFSATFFIAYDKTKQNIPLAIAIVSIVPVVCFCLFHSKLVVDIFRSGYWAQF 692

Query: 193 SLTRRTRRLF 202
           SL +  +RLF
Sbjct: 693 SLKKHKKRLF 702

[Close]

BLAST of Lcy06g005680 vs. TAIR 10
Match: AT5G35810.1 (Ankyrin repeat family protein )

HSP 1 Score: 144.1 bits (362), Expect = 1.3e-34
Identity = 85/175 (48.57%), Postives = 119/175 (68.00%), Query Frame = 0


Query: 21  EYFTKEHQQLLKDGEKWMKNTAHSCMVVATLIATVVFGAGFTMPGGNDDK-----TGIPI 80
           + FTKEH  L K+GEKWMK TA +C++V+TLIATVVF A FT+PGGND        G P 
Sbjct: 160 DLFTKEHDNLRKEGEKWMKETATACILVSTLIATVVFAAAFTLPGGNDTSGDIKTLGFPT 219

Query: 81  FRQKTAFLAFVIADVAALVLSILSILTFLSILTSRYAEDDFLVSLPAKLVVGLVTLALSM 140
           FR++  F  F+I+D  AL+ S+ SI+ FLSILTSRYAE  F  +LP KL++GL+ L +S+
Sbjct: 220 FRKEFWFEVFIISDSVALLSSVTSIMIFLSILTSRYAEASFQTTLPTKLMLGLLALFVSI 279

Query: 141 TSMVAAFSSTFFIAYD-ETKWIAPWVITGMAFIPAVWFIMLHYKLVVDIVSSWWL 190
            SMV AF++T  +  D E KW +  ++  +A   A+ F++LH++L  D + S +L
Sbjct: 280 ISMVLAFTATLILIRDQEPKW-SLILLVYVASATALSFVVLHFQLWFDTLRSAYL 333

[Close]

BLAST of Lcy06g005680 vs. TAIR 10
Match: AT5G04690.1 (Ankyrin repeat family protein )

HSP 1 Score: 138.7 bits (348), Expect = 5.5e-33
Identity = 78/188 (41.49%), Postives = 118/188 (62.77%), Query Frame = 0


Query: 15  DSFTQREYFTKEHQQLLKDGEKWMKNTAHSCMVVATLIATVVFGAGFTMPGGNDDKT-GI 74
           ++ T  E F KEH+ +  + EKWMK+TA SC +VA LI TV F A FT+PGG DD + G 
Sbjct: 440 ENLTPIEIFRKEHEAMRLEAEKWMKDTAMSCSLVAALIVTVTFAAIFTVPGGTDDNSGGR 499

Query: 75  PIFRQKTAFLAFVIADVAALVLSILSILTFLSILTSRYAEDDFLVSLPAKLVVGLVTLAL 134
           P  R +  F+ F+++D+ +   +  S+L FL ILT+RYA DDFL SLPA ++ GL TL +
Sbjct: 500 PFHRHERIFVIFIVSDLISCFAACTSVLIFLGILTARYAFDDFLFSLPANMIAGLSTLFV 559

Query: 135 SMTSMVAAFSSTFFIAYDETKWIAPWVITGMAFIPAVWFIMLHYKLVVDIVSSWWLRFSL 194
           S+ +M+ AFSS  F  +++   +AP +    A  PA+ F+M+ Y L+ +++ S + +   
Sbjct: 560 SIAAMLVAFSSALFTIFNDPWIVAPTIF--FACFPALLFVMIQYPLLKELIFSTYGKRIF 619

Query: 195 TRRTRRLF 202
            R  + LF
Sbjct: 620 DRNMKSLF 625

[Close]

BLAST of Lcy06g005680 vs. TAIR 10
Match: AT5G04700.1 (Ankyrin repeat family protein )

HSP 1 Score: 134.4 bits (337), Expect = 1.0e-31
Identity = 80/172 (46.51%), Postives = 113/172 (65.70%), Query Frame = 0


Query: 18  TQREYFTKEHQQLLKDGEKWMKNTAHSCMVVATLIATVVFGAGFTMPGGNDDKT-GIPIF 77
           T  E FTKEHQ L ++ EKWMK+TA SC +VA LI TV F A FT+PGG DD + G P  
Sbjct: 485 TPIEIFTKEHQGLRQEAEKWMKDTAMSCSLVAALIVTVTFAAVFTVPGGTDDNSKGKPFH 544

Query: 78  RQKTAFLAFVIADVAALVLSILSILTFLSILTSRYAEDDFLVSLPAKLVVGLVTLALSMT 137
            +   F+ F+++D+ +   S  S+L FL ILT+RY+ DDFLV LP K++ GL  L +S+ 
Sbjct: 545 LRDRRFIIFIVSDLISCFASCTSVLIFLGILTARYSFDDFLVFLPTKMIAGLSILFVSIA 604

Query: 138 SMVAAFSSTFF-IAYDETKWI-APWVITGMAFIPAVWFIMLHYKLVVDIVSS 187
           +M+ AFSS  F +   E KWI AP ++   A +PA+ F++L Y L+ +++ S
Sbjct: 605 AMLIAFSSALFTMMGKEGKWIVAPTIL--FACLPALLFVLLQYPLLKEMIFS 654

[Close]

BLAST of Lcy06g005680 vs. TAIR 10
Match: AT3G54070.1 (Ankyrin repeat family protein )

HSP 1 Score: 128.6 bits (322), Expect = 5.7e-30
Identity = 76/179 (42.46%), Postives = 113/179 (63.13%), Query Frame = 0


Query: 21  EYFTKEHQQLLKDGEKWMKNTAHSCMVVATLIATVVFGAGFTMPGGNDDK------TGIP 80
           + FT++H+ L K+GE+WMK TA +CM+ ATLIATVVF A  T+PGGNDD        G P
Sbjct: 384 DIFTEQHENLRKEGERWMKETATACMLGATLIATVVFAAAITIPGGNDDSGDKANTLGFP 443

Query: 81  IFRQKTAFLAFVIADVAALVLSILSILTFLSILTSRYAEDDFLVSLPAKLVVGLVTLALS 140
            FR++  F  F ++D  AL  S++SI+ FLSI TSRYAE+DF   LP KL+ GL  L +S
Sbjct: 444 NFRKRLLFDIFTLSDSVALFSSMMSIVIFLSIFTSRYAEEDFRYDLPTKLMFGLSALFIS 503

Query: 141 MTSMVAAFSSTFFIAYDETKWIAPWVITGMAFIPAVWFIMLHYKLVVDIVSSWWLRFSL 194
           + SM+ AF+ +  +   E   ++  +I+ +A + A+ F  L++ L  + + S ++   L
Sbjct: 504 IISMILAFTFSMILIRVEKASLSLVLISCLASLTALTFAYLYFHLWFNTLRSVYISMFL 562

[Close]

BLAST of Lcy06g005680 vs. TAIR 10
Match: AT5G04730.1 (Ankyrin-repeat containing protein )

HSP 1 Score: 126.3 bits (316), Expect = 2.8e-29
Identity = 78/184 (42.39%), Postives = 111/184 (60.33%), Query Frame = 0


Query: 15  DSFTQREYFTKEHQQLLKDGEKWMKNTAHSCMVVATLIATVVFGAGFTMPGGNDDKTGIP 74
           D+ T R+ F   H+ L K+GE+WMK TA +C  VA LIATV F A FT+PGG D  +G P
Sbjct: 417 DNKTPRQIFEHYHEHLRKEGEEWMKYTATACSFVAALIATVTFQAIFTVPGGIDGTSGSP 476

Query: 75  IFRQKTAFLAFVIADVAALVLSILSILTFLSILTSRYAEDDFLVSLPAKLVVGLVTLALS 134
           +      F AF+  D  A   S +S+L FLSILTSRY+ DDF+VSLP K+++G   L +S
Sbjct: 477 LILNDLHFRAFIFTDTLAFFASCISVLIFLSILTSRYSFDDFIVSLPRKMILGQSILFIS 536

Query: 135 MTSMVAAFSSTFFIAYDETKWIAPWVITGMAFIPAVWFIMLHYKLVVDIVSSWWLRFSLT 194
           + SM+ AF  T   A    K    + +  +A  P++ F+ML Y L+ +++SS + +    
Sbjct: 537 IASMLVAF-ITSLSASMRHKPALVYPLKPLASFPSLLFLMLQYPLLKEMISSTYGKRLFY 596

Query: 195 RRTR 199
           R T+
Sbjct: 597 RDTK 599

The following BLAST results are available for this feature:

BLAST of Lcy06g005680 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9C7A2	5.3e-04	27.74	Ankyrin repeat-containing protein ITN1 OS=Arabidopsis thaliana OX=3702 GN=ITN1 P...	[more]

BLAST of Lcy06g005680 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JYW0	8.6e-58	66.67	ankyrin repeat-containing protein At5g02620-like OS=Cucurbita maxima OX=3661 GN=...	[more]
A0A6J1GTF5	8.6e-58	66.67	ankyrin repeat-containing protein ITN1-like OS=Cucurbita moschata OX=3662 GN=LOC...	[more]
A0A5A7UP28	4.3e-57	65.79	Ankyrin repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2...	[more]
A0A5D3BLW8	4.3e-57	65.79	Ankyrin repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A1S3B2F0	4.3e-57	65.79	ankyrin repeat-containing protein At5g02620-like OS=Cucumis melo OX=3656 GN=LOC1...	[more]

BLAST of Lcy06g005680 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6573174.1	1.8e-57	66.67	Ankyrin repeat-containing protein ITN1, partial [Cucurbita argyrosperma subsp. s...	[more]
XP_022954800.1	1.8e-57	66.67	ankyrin repeat-containing protein ITN1-like [Cucurbita moschata]	[more]
XP_022994346.1	1.8e-57	66.67	ankyrin repeat-containing protein At5g02620-like [Cucurbita maxima]	[more]
XP_023542596.1	3.9e-57	66.67	ankyrin repeat-containing protein ITN1-like [Cucurbita pepo subsp. pepo]	[more]
TYJ99325.1	8.8e-57	65.79	ankyrin repeat-containing protein [Cucumis melo var. makuwa]	[more]

BLAST of Lcy06g005680 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G35810.1	1.3e-34	48.57	Ankyrin repeat family protein	[more]
AT5G04690.1	5.5e-33	41.49	Ankyrin repeat family protein	[more]
AT5G04700.1	1.0e-31	46.51	Ankyrin repeat family protein	[more]
AT3G54070.1	5.7e-30	42.46	Ankyrin repeat family protein	[more]
AT5G04730.1	2.8e-29	42.39	Ankyrin-repeat containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR026961	PGG domain	PFAM	PF13962	PGG	coord: 35..148 e-value: 1.1E-28 score: 99.4
None	No IPR available	PANTHER	PTHR24177	CASKIN	coord: 13..200
None	No IPR available	PANTHER	PTHR24177:SF143	ANKYRIN REPEAT PROTEIN	coord: 13..200

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy06g005680.1	Lcy06g005680.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane