Lcy06g004920 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy06g004920
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	MYND-type domain-containing protein
Location	Chr06: 4577942 .. 4579541 (-)
RNA-Seq Expression	Lcy06g004920
Synteny	Lcy06g004920

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CGCCGTTGCTGCATCGCTTAGAGATATAAATTTAACGCACTCGATTCGTTTTGCCGTCACTACATGCTTGCTCTAACAAAGATCCAATTCTGGCTTCATTTCATCCTCCATTAACGGACCTCCATTTTTGCAGTACTTTCATGGCGTTTTCGTTTTCGAGGTGAAGGCCACCACGAGGACCACTCTATTGCATTCCGTAATGTTGTGCAATAAAAGAAGGCGAACTTCGAGCAGCACCGGCGCCGGGATTTCTGATCTCTTCGACGGTTTGCCGGACGATCTAGTAGTCGTCGTCCTCGGCAAACTTAGCGCCACCGCTTCTTCTCCTTCCGATCTCGTCAATGTTATGATAACGTAAGAATCGCCGAGTGATTCGCCTGATTTTGTGGTTTGTTTAATCTCTGAGTTTCTTGTTATTATTTTCTTTTGATGTTTATGTGATATTTTGGTTGCGAATCACAGATGTAAAAGGTTCAATCGATTGGCTCTCCATCCGTTTGTGCTTTCGAAAGCTGGACCTAAAGCATTTGAAATCCGAACCAAAAACTGGTGCGAATCGTCTCATCGATTTCTCAAATTGTGCGTTTCTGCCGGTAGCGTGGAAGCCTGCTACACTCTCGGAATGGTTCGTGTAATTGATTGATTTTCTTCTCTGCAATTTCAAACTGAGATGATTTTGAATCTTAATTCGGTTATGTTTAGTTTACCGTTTTTCTTTTTGCAGATCGAGTTTTATTGTTTGAAGAACAGAGGAAATGGAGCTTCATTAATGGCAAAGGCCGCGATTAAATCTCATCCGTTGGCGCTTTACTCGCTCGCCATCATACAATTTAACGGAAGTGGTGGTTCAAAGAGCGACAAGAATCTCCGTGCTGGTGTGGCTCTGTGCGGACGAGCCGCGTATCTCGGCCATATCGACGCGCTTCGTGAACTAGGCCACTGCCTTCAAGACGGTTACGGCGTCGCTGAAAACGCATCCGAGGGACGTCGTCTCCTAATCGAAGCCAACGCGCGTGAGCTCGCGTCCATAACAAACTCCTCCCTCCGCCGTCTCAACTGCTCGGGCGACCGCCTGTCTCCAACGGATTCCGCCGGATCGCTCCTAAGTGACTTCGGCTGCAACATTCCGGCGCCGGAGGCTCATCCTGCGAACCAATTTCTAAGAGATTGGTTCGCATCGGGCCGTGGATGTATCGCTGAAGGACTGAGGCTTTGCTCGAACAGTGGCTGTGGAAGGCCAGAGACTCGGCTCCATGAATTCCGGCGGTGCTCGGTCTGTGGTAATGTAAATTATTGCTCACGAGGATGCCAGGCTCTGGACTGGAAACTGCGGCACAAGACGGAATGTGCGCCGTTCGATCGGTGGCTGATTGAGGATGATGACCTCGAAATTGACGACGACGGCGGCGTCGTAAACAGAATAGAGCAGTTCGAAGACGGTGAGAATGTGGAATCTGAATGATATTTGATGATTAAAAGCAAAGCTTACTTTTGTTGCTTGACATCAATTTATCTTTTTAAAATTCTTTTTATTTTATTTTATTTTTTACTTCCTCATCTTTTTTAACATGGAGTTGGCATCTCGAGGTTTTTGTCTGTA

mRNA sequence

CGCCGTTGCTGCATCGCTTAGAGATATAAATTTAACGCACTCGATTCGTTTTGCCGTCACTACATGCTTGCTCTAACAAAGATCCAATTCTGGCTTCATTTCATCCTCCATTAACGGACCTCCATTTTTGCAGTACTTTCATGGCGTTTTCGTTTTCGAGGTGAAGGCCACCACGAGGACCACTCTATTGCATTCCGTAATGTTGTGCAATAAAAGAAGGCGAACTTCGAGCAGCACCGGCGCCGGGATTTCTGATCTCTTCGACGGTTTGCCGGACGATCTAGTAGTCGTCGTCCTCGGCAAACTTAGCGCCACCGCTTCTTCTCCTTCCGATCTCGTCAATGTTATGATAACATGTAAAAGGTTCAATCGATTGGCTCTCCATCCGTTTGTGCTTTCGAAAGCTGGACCTAAAGCATTTGAAATCCGAACCAAAAACTGGTGCGAATCGTCTCATCGATTTCTCAAATTGTGCGTTTCTGCCGGTAGCGTGGAAGCCTGCTACACTCTCGGAATGATCGAGTTTTATTGTTTGAAGAACAGAGGAAATGGAGCTTCATTAATGGCAAAGGCCGCGATTAAATCTCATCCGTTGGCGCTTTACTCGCTCGCCATCATACAATTTAACGGAAGTGGTGGTTCAAAGAGCGACAAGAATCTCCGTGCTGGTGTGGCTCTGTGCGGACGAGCCGCGTATCTCGGCCATATCGACGCGCTTCGTGAACTAGGCCACTGCCTTCAAGACGGTTACGGCGTCGCTGAAAACGCATCCGAGGGACGTCGTCTCCTAATCGAAGCCAACGCGCGTGAGCTCGCGTCCATAACAAACTCCTCCCTCCGCCGTCTCAACTGCTCGGGCGACCGCCTGTCTCCAACGGATTCCGCCGGATCGCTCCTAAGTGACTTCGGCTGCAACATTCCGGCGCCGGAGGCTCATCCTGCGAACCAATTTCTAAGAGATTGGTTCGCATCGGGCCGTGGATGTATCGCTGAAGGACTGAGGCTTTGCTCGAACAGTGGCTGTGGAAGGCCAGAGACTCGGCTCCATGAATTCCGGCGGTGCTCGGTCTGTGGTAATGTAAATTATTGCTCACGAGGATGCCAGGCTCTGGACTGGAAACTGCGGCACAAGACGGAATGTGCGCCGTTCGATCGGTGGCTGATTGAGGATGATGACCTCGAAATTGACGACGACGGCGGCGTCGTAAACAGAATAGAGCAGTTCGAAGACGGTGAGAATGTGGAATCTGAATGATATTTGATGATTAAAAGCAAAGCTTACTTTTGTTGCTTGACATCAATTTATCTTTTTAAAATTCTTTTTATTTTATTTTATTTTTTACTTCCTCATCTTTTTTAACATGGAGTTGGCATCTCGAGGTTTTTGTCTGTA

Coding sequence (CDS)

ATGTTGTGCAATAAAAGAAGGCGAACTTCGAGCAGCACCGGCGCCGGGATTTCTGATCTCTTCGACGGTTTGCCGGACGATCTAGTAGTCGTCGTCCTCGGCAAACTTAGCGCCACCGCTTCTTCTCCTTCCGATCTCGTCAATGTTATGATAACATGTAAAAGGTTCAATCGATTGGCTCTCCATCCGTTTGTGCTTTCGAAAGCTGGACCTAAAGCATTTGAAATCCGAACCAAAAACTGGTGCGAATCGTCTCATCGATTTCTCAAATTGTGCGTTTCTGCCGGTAGCGTGGAAGCCTGCTACACTCTCGGAATGATCGAGTTTTATTGTTTGAAGAACAGAGGAAATGGAGCTTCATTAATGGCAAAGGCCGCGATTAAATCTCATCCGTTGGCGCTTTACTCGCTCGCCATCATACAATTTAACGGAAGTGGTGGTTCAAAGAGCGACAAGAATCTCCGTGCTGGTGTGGCTCTGTGCGGACGAGCCGCGTATCTCGGCCATATCGACGCGCTTCGTGAACTAGGCCACTGCCTTCAAGACGGTTACGGCGTCGCTGAAAACGCATCCGAGGGACGTCGTCTCCTAATCGAAGCCAACGCGCGTGAGCTCGCGTCCATAACAAACTCCTCCCTCCGCCGTCTCAACTGCTCGGGCGACCGCCTGTCTCCAACGGATTCCGCCGGATCGCTCCTAAGTGACTTCGGCTGCAACATTCCGGCGCCGGAGGCTCATCCTGCGAACCAATTTCTAAGAGATTGGTTCGCATCGGGCCGTGGATGTATCGCTGAAGGACTGAGGCTTTGCTCGAACAGTGGCTGTGGAAGGCCAGAGACTCGGCTCCATGAATTCCGGCGGTGCTCGGTCTGTGGTAATGTAAATTATTGCTCACGAGGATGCCAGGCTCTGGACTGGAAACTGCGGCACAAGACGGAATGTGCGCCGTTCGATCGGTGGCTGATTGAGGATGATGACCTCGAAATTGACGACGACGGCGGCGTCGTAAACAGAATAGAGCAGTTCGAAGACGGTGAGAATGTGGAATCTGAATGA

Protein sequence

MLCNKRRRTSSSTGAGISDLFDGLPDDLVVVVLGKLSATASSPSDLVNVMITCKRFNRLALHPFVLSKAGPKAFEIRTKNWCESSHRFLKLCVSAGSVEACYTLGMIEFYCLKNRGNGASLMAKAAIKSHPLALYSLAIIQFNGSGGSKSDKNLRAGVALCGRAAYLGHIDALRELGHCLQDGYGVAENASEGRRLLIEANARELASITNSSLRRLNCSGDRLSPTDSAGSLLSDFGCNIPAPEAHPANQFLRDWFASGRGCIAEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCSRGCQALDWKLRHKTECAPFDRWLIEDDDLEIDDDGGVVNRIEQFEDGENVESE

Homology

[Close]

BLAST of Lcy06g004920 vs. ExPASy Swiss-Prot
Match: Q9FYF9 (F-box protein At1g67340 OS=Arabidopsis thaliana OX=3702 GN=At1g67340 PE=1 SV=1)

HSP 1 Score: 441.4 bits (1134), Expect = 9.4e-123
Identity = 217/336 (64.58%), Postives = 260/336 (77.38%), Query Frame = 0


Query: 11  SSTGAGISDLFDGLPDDLVVVVLGKLSATASSPSDLVNVMITCKRFNRLALHPFVLSKAG 70
           ++TGA   DL D +PDDLV+ +L KL +T+  P+D +NV++TCKR   LA++P VLS+  
Sbjct: 37  NTTGA---DLLDSIPDDLVISILCKLGSTSRCPADFINVLLTCKRLKGLAMNPIVLSRLS 96

Query: 71  PKAFEIRTKNWCESSHRFLKLCVSAGSVEACYTLGMIEFYCLKNRGNGASLMAKAAIKSH 130
           PKA  ++  NW E SHRFLK CV AGS+EACYTLGMI FYCL+NRGNGASLMAKAAI SH
Sbjct: 97  PKAIAVKAHNWSEYSHRFLKRCVDAGSLEACYTLGMIRFYCLQNRGNGASLMAKAAISSH 156

Query: 131 PLALYSLAIIQFNGSGGSKSDKNLRAGVALCGRAAYLGHIDALRELGHCLQDGYGVAENA 190
             ALYSLA+IQFNGSGGSK+DK+LRAGVALC RAA+LGH+DALRELGHCLQDGYGV +N 
Sbjct: 157 APALYSLAVIQFNGSGGSKNDKDLRAGVALCARAAFLGHVDALRELGHCLQDGYGVPQNV 216

Query: 191 SEGRRLLIEANARELASITNSSLRR----LNCSGDRLSPTDSAGS----LLSDFGCNIPA 250
           SEGRR L++ANARELA++ +S ++     L+ S        + G     LLSDFGCN+PA
Sbjct: 217 SEGRRFLVQANARELAAVLSSGIQARSTWLSLSQPPPPVVPNHGQQTCPLLSDFGCNVPA 276

Query: 251 PEAHPANQFLRDWFA-SGRGCIAEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCSRGC 310
           PE HPAN+FL DWFA  G  C  +GLRLCS++GCGRPETR HEFRRCSVCG VNYCSR C
Sbjct: 277 PETHPANRFLADWFAVRGGDCPGDGLRLCSHAGCGRPETRKHEFRRCSVCGVVNYCSRAC 336

Query: 311 QALDWKLRHKTECAPFDRWLIEDD----DLEIDDDG 334
           QALDWKLRHK +CAP  RWL E D    +++ID +G
Sbjct: 337 QALDWKLRHKMDCAPVQRWLEEGDGGEGNVQIDGNG 369

[Close]

BLAST of Lcy06g004920 vs. ExPASy Swiss-Prot
Match: Q9FK27 (F-box protein At5g50450 OS=Arabidopsis thaliana OX=3702 GN=At5g50450 PE=2 SV=1)

HSP 1 Score: 414.1 bits (1063), Expect = 1.6e-114
Identity = 203/333 (60.96%), Postives = 249/333 (74.77%), Query Frame = 0


Query: 4   NKRRRTSSSTGAGISDLFDGLPDDLVVVVLGKLSATASSPSDLVNVMITCKRFNRLALHP 63
           NK++R  ++    +++ F+ L DDL++ +L KL+ +ASSPSD + V+ TCKR NRL LHP
Sbjct: 5   NKKQRLENNHNNTVNNHFEDLHDDLIISILRKLATSASSPSDFLTVLSTCKRLNRLGLHP 64

Query: 64  FVLSKAGPKAFEIRTKNWCESSHRFLKLCVSAGSVEACYTLGMIEFYCLKNRGNGASLMA 123
            VLSKAG +   +  + W +SSH+FLKLCV+AG+++A Y+LGMI FYCL+N  +GASLMA
Sbjct: 65  LVLSKAGTQTLAVTAEKWSDSSHKFLKLCVNAGNIDASYSLGMIRFYCLQNPVSGASLMA 124

Query: 124 KAAIKSHPLALYSLAIIQFNGSGGSKSDKNLRAGVALCGRAAYLGHIDALRELGHCLQDG 183
           KAAIKSH  ALYSL++IQFNGSGGSK+DKNLRAGVALC R+AYLGH+DALRELGHCLQDG
Sbjct: 125 KAAIKSHAPALYSLSVIQFNGSGGSKTDKNLRAGVALCARSAYLGHVDALRELGHCLQDG 184

Query: 184 YGVAENASEGRRLLIEANARELASITNSSLRRLNCSGDRLSPTDSAGSLLSDFGCNIPAP 243
           YGV  + SEGRRLLI+ANARELA    S L     SGD           L+D    +P  
Sbjct: 185 YGVPRDVSEGRRLLIQANARELACSLRSYLSLK--SGDE-------NETLTDLSV-VPVQ 244

Query: 244 EAHPANQFLRDWFASGRGCIAEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCSRGCQA 303
           E HP N+FL++WF+SGR  +AEGLR+CS+ GCGRPETR HEFRRCSVCG VNYCSRGCQA
Sbjct: 245 EIHPVNRFLKEWFSSGRVDLAEGLRMCSHGGCGRPETRAHEFRRCSVCGKVNYCSRGCQA 304

Query: 304 LDWKLRHKTECAPFDRWLIEDDDLEIDDDGGVV 337
           LDW+ +HK EC P D W+      EI DDG  V
Sbjct: 305 LDWRAKHKVECTPLDLWVAA--AAEIGDDGEAV 325

[Close]

BLAST of Lcy06g004920 vs. ExPASy Swiss-Prot
Match: Q2YDC9 (Programmed cell death protein 2 OS=Bos taurus OX=9913 GN=PDCD2 PE=2 SV=1)

HSP 1 Score: 50.4 bits (119), Expect = 4.7e-05
Identity = 23/56 (41.07%), Postives = 29/56 (51.79%), Query Frame = 0


Query: 263 IAEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCSRGCQALDWKLRHKTECAPFD 319
           +  G  LC   GC  P       +RCS C   +YCS+  Q+LDW+L HK  CA  D
Sbjct: 128 LKSGAHLCRVCGCSGP-------KRCSRCHKAHYCSKEHQSLDWRLGHKQACAQTD 176

[Close]

BLAST of Lcy06g004920 vs. ExPASy Swiss-Prot
Match: Q09415 (SET domain-containing protein 14 OS=Caenorhabditis elegans OX=6239 GN=set-14 PE=4 SV=2)

HSP 1 Score: 47.8 bits (112), Expect = 3.0e-04
Identity = 20/42 (47.62%), Postives = 26/42 (61.90%), Query Frame = 0


Query: 273 SGCGRPETRLHEFRRCSVCGNVNYCSRGCQALDWKLRHKTEC 315
           S C +  T + E ++CS C  + YCS+ CQ  DWKL HK EC
Sbjct: 24  SYCNQCLTSMAELKKCSACRRLAYCSQECQRADWKL-HKVEC 64

[Close]

BLAST of Lcy06g004920 vs. ExPASy Swiss-Prot
Match: Q9SJA1 (Ubiquitin carboxyl-terminal hydrolase 19 OS=Arabidopsis thaliana OX=3702 GN=UBP19 PE=2 SV=2)

HSP 1 Score: 46.6 bits (109), Expect = 6.7e-04
Identity = 23/61 (37.70%), Postives = 32/61 (52.46%), Query Frame = 0


Query: 273 SGCGRPETRLHEFRRCSVCGNVNYCSRGCQALDWKLRHKTECAPF---DRWLIEDDDLEI 331
           S CG+  T     ++CS C +V YCS  CQ  DWK  HK +C  F   D   +  DD++ 
Sbjct: 65  SVCGKATT-----KKCSRCKSVRYCSAACQTSDWKSGHKLKCKGFRSTDSSPVRRDDIDF 120

[Close]

BLAST of Lcy06g004920 vs. ExPASy TrEMBL
Match: A0A0A0LTV0 (MYND-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G050480 PE=4 SV=1)

HSP 1 Score: 661.4 bits (1705), Expect = 2.1e-186
Identity = 323/351 (92.02%), Postives = 333/351 (94.87%), Query Frame = 0


Query: 1   MLCNKRRRTSSSTGAGISDLFDGLPDDLVVVVLGKLSATASSPSDLVNVMITCKRFNRLA 60
           MLCNKRRRTS+S   GISDLFDGLPDDLVVVVLGKLSATASSP DLVNVMITCKRFNRLA
Sbjct: 1   MLCNKRRRTSTSAATGISDLFDGLPDDLVVVVLGKLSATASSPLDLVNVMITCKRFNRLA 60

Query: 61  LHPFVLSKAGPKAFEIRTKNWCESSHRFLKLCVSAGSVEACYTLGMIEFYCLKNRGNGAS 120
           LHP VLSKAGPKAFEI+TKNW ES+HRFLKLCVSAG+VEACYTLGMIEFYCLKNRG GAS
Sbjct: 61  LHPIVLSKAGPKAFEIQTKNWSESTHRFLKLCVSAGNVEACYTLGMIEFYCLKNRGTGAS 120

Query: 121 LMAKAAIKSHPLALYSLAIIQFNGSGGSKSDKNLRAGVALCGRAAYLGHIDALRELGHCL 180
           LMAKAAIKSHPLALYSLAI+QFNGSGGSKSDKNLRAGVALCGRAAYLGHIDALRELGHCL
Sbjct: 121 LMAKAAIKSHPLALYSLAIVQFNGSGGSKSDKNLRAGVALCGRAAYLGHIDALRELGHCL 180

Query: 181 QDGYGVAENASEGRRLLIEANARELASITNSSLRRLNCSGDRLSPTDSAGSLLSDFGCNI 240
           QDGYGV +N SEGRRLLIEANARELA ITNSSLRRL+CS  R S TDS GSLLSDFGCN 
Sbjct: 181 QDGYGVPQNVSEGRRLLIEANARELAYITNSSLRRLHCSRHRQSATDSGGSLLSDFGCNF 240

Query: 241 PAPEAHPANQFLRDWFASGRGCIAEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCSRG 300
           PAPEAHPANQFLRDWFASGRG IAEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCSRG
Sbjct: 241 PAPEAHPANQFLRDWFASGRGSIAEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCSRG 300

Query: 301 CQALDWKLRHKTECAPFDRWLIEDDDLEIDDDGGVVNRIEQFEDGENVESE 352
           CQALDWKLRHKTECAPFDRWLIE+D+LE DDDGGVVNRIEQF+DGENVESE
Sbjct: 301 CQALDWKLRHKTECAPFDRWLIEEDELEGDDDGGVVNRIEQFDDGENVESE 351

[Close]

BLAST of Lcy06g004920 vs. ExPASy TrEMBL
Match: A0A5A7UP50 (F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G004680 PE=4 SV=1)

HSP 1 Score: 660.6 bits (1703), Expect = 3.6e-186
Identity = 325/351 (92.59%), Postives = 335/351 (95.44%), Query Frame = 0


Query: 1   MLCNKRRRTSSSTGAGISDLFDGLPDDLVVVVLGKLSATASSPSDLVNVMITCKRFNRLA 60
           MLCNKRRRTS+S GAGISDLFDGLPDDLVVVVLGKLSATASSPSDLVNVMITCKRFNRLA
Sbjct: 1   MLCNKRRRTSTSAGAGISDLFDGLPDDLVVVVLGKLSATASSPSDLVNVMITCKRFNRLA 60

Query: 61  LHPFVLSKAGPKAFEIRTKNWCESSHRFLKLCVSAGSVEACYTLGMIEFYCLKNRGNGAS 120
           LHP VLSKAGPKAFEI+TKNW ES+HRFLKLCVSAG+VEACYTLGMIEFYCLKNRG GAS
Sbjct: 61  LHPIVLSKAGPKAFEIQTKNWSESTHRFLKLCVSAGNVEACYTLGMIEFYCLKNRGTGAS 120

Query: 121 LMAKAAIKSHPLALYSLAIIQFNGSGGSKSDKNLRAGVALCGRAAYLGHIDALRELGHCL 180
           LMAKAAIKSHPLALYSLAI+QFNGSGGSKSDKNLRAGVALCGRAAYLGHIDALRELGHCL
Sbjct: 121 LMAKAAIKSHPLALYSLAIVQFNGSGGSKSDKNLRAGVALCGRAAYLGHIDALRELGHCL 180

Query: 181 QDGYGVAENASEGRRLLIEANARELASITNSSLRRLNCSGDRLSPTDSAGSLLSDFGCNI 240
           QDGYGV +NASEGRRLLIEANARELA ITNSSLRRL+CS  R S TDS GSLLSDFGCN 
Sbjct: 181 QDGYGVPQNASEGRRLLIEANARELAYITNSSLRRLHCSSHRQSATDSGGSLLSDFGCNF 240

Query: 241 PAPEAHPANQFLRDWFASGRGCIAEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCSRG 300
           PAPEAHPANQFLRDWFASGRG IAEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCSRG
Sbjct: 241 PAPEAHPANQFLRDWFASGRGSIAEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCSRG 300

Query: 301 CQALDWKLRHKTECAPFDRWLIEDDDLEIDDDGGVVNRIEQFEDGENVESE 352
           CQALDWKLRHKTECAPFDRWLIED++LE D+DGG VNRIEQF DGENVESE
Sbjct: 301 CQALDWKLRHKTECAPFDRWLIEDEELEGDEDGG-VNRIEQFGDGENVESE 350

[Close]

BLAST of Lcy06g004920 vs. ExPASy TrEMBL
Match: A0A1S3AZD5 (F-box protein At1g67340 OS=Cucumis melo OX=3656 GN=LOC103484413 PE=4 SV=1)

HSP 1 Score: 660.6 bits (1703), Expect = 3.6e-186
Identity = 325/351 (92.59%), Postives = 335/351 (95.44%), Query Frame = 0


Query: 1   MLCNKRRRTSSSTGAGISDLFDGLPDDLVVVVLGKLSATASSPSDLVNVMITCKRFNRLA 60
           MLCNKRRRTS+S GAGISDLFDGLPDDLVVVVLGKLSATASSPSDLVNVMITCKRFNRLA
Sbjct: 1   MLCNKRRRTSTSAGAGISDLFDGLPDDLVVVVLGKLSATASSPSDLVNVMITCKRFNRLA 60

Query: 61  LHPFVLSKAGPKAFEIRTKNWCESSHRFLKLCVSAGSVEACYTLGMIEFYCLKNRGNGAS 120
           LHP VLSKAGPKAFEI+TKNW ES+HRFLKLCVSAG+VEACYTLGMIEFYCLKNRG GAS
Sbjct: 61  LHPIVLSKAGPKAFEIQTKNWSESTHRFLKLCVSAGNVEACYTLGMIEFYCLKNRGTGAS 120

Query: 121 LMAKAAIKSHPLALYSLAIIQFNGSGGSKSDKNLRAGVALCGRAAYLGHIDALRELGHCL 180
           LMAKAAIKSHPLALYSLAI+QFNGSGGSKSDKNLRAGVALCGRAAYLGHIDALRELGHCL
Sbjct: 121 LMAKAAIKSHPLALYSLAIVQFNGSGGSKSDKNLRAGVALCGRAAYLGHIDALRELGHCL 180

Query: 181 QDGYGVAENASEGRRLLIEANARELASITNSSLRRLNCSGDRLSPTDSAGSLLSDFGCNI 240
           QDGYGV +NASEGRRLLIEANARELA ITNSSLRRL+CS  R S TDS GSLLSDFGCN 
Sbjct: 181 QDGYGVPQNASEGRRLLIEANARELAYITNSSLRRLHCSSHRQSATDSGGSLLSDFGCNF 240

Query: 241 PAPEAHPANQFLRDWFASGRGCIAEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCSRG 300
           PAPEAHPANQFLRDWFASGRG IAEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCSRG
Sbjct: 241 PAPEAHPANQFLRDWFASGRGSIAEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCSRG 300

Query: 301 CQALDWKLRHKTECAPFDRWLIEDDDLEIDDDGGVVNRIEQFEDGENVESE 352
           CQALDWKLRHKTECAPFDRWLIED++LE D+DGG VNRIEQF DGENVESE
Sbjct: 301 CQALDWKLRHKTECAPFDRWLIEDEELEGDEDGG-VNRIEQFGDGENVESE 350

[Close]

BLAST of Lcy06g004920 vs. ExPASy TrEMBL
Match: A0A6J1EA77 (F-box protein At5g50450-like OS=Cucurbita moschata OX=3662 GN=LOC111431294 PE=4 SV=1)

HSP 1 Score: 646.7 bits (1667), Expect = 5.4e-182
Identity = 318/351 (90.60%), Postives = 331/351 (94.30%), Query Frame = 0


Query: 1   MLCNKRRRTSSSTGAGISDLFDGLPDDLVVVVLGKLSATASSPSDLVNVMITCKRFNRLA 60
           M+CNKRRRTS+ST AGISDLFDGLPDDLVVVVLGKLSA ASSPSD+VNVMITCKRFNRLA
Sbjct: 1   MVCNKRRRTSTSTDAGISDLFDGLPDDLVVVVLGKLSAAASSPSDIVNVMITCKRFNRLA 60

Query: 61  LHPFVLSKAGPKAFEIRTKNWCESSHRFLKLCVSAGSVEACYTLGMIEFYCLKNRGNGAS 120
           LHPFVL KAGPK FEI+T NW ES+HRFLKLCVSAG+VEACYTLGMIEFYCLKNRG+GAS
Sbjct: 61  LHPFVLKKAGPKVFEIQTINWSESTHRFLKLCVSAGNVEACYTLGMIEFYCLKNRGSGAS 120

Query: 121 LMAKAAIKSHPLALYSLAIIQFNGSGGSKSDKNLRAGVALCGRAAYLGHIDALRELGHCL 180
           LMAKAAIKSHPLALYSLAI+QFNGSGGSKSDKNLRAGVALCGRAAYLGHIDALRELGHCL
Sbjct: 121 LMAKAAIKSHPLALYSLAIVQFNGSGGSKSDKNLRAGVALCGRAAYLGHIDALRELGHCL 180

Query: 181 QDGYGVAENASEGRRLLIEANARELASITNSSLRRLNCSGDRLSPTDSAGSLLSDFGCNI 240
           QDGYGVA+NASEGRRLLIEANARELASITNSSL RL+C GD+   TDS+ SLLSDFGC  
Sbjct: 181 QDGYGVAQNASEGRRLLIEANARELASITNSSLLRLHCCGDQPPATDSSESLLSDFGCKF 240

Query: 241 PAPEAHPANQFLRDWFASGRGCIAEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCSRG 300
           PAPE HPANQFLRDWFASGRG IAEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCSRG
Sbjct: 241 PAPETHPANQFLRDWFASGRGFIAEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCSRG 300

Query: 301 CQALDWKLRHKTECAPFDRWLIEDDDLEIDDDGGVVNRIEQFEDGENVESE 352
           CQALDWKLRHKTECAPFDRWLIEDDDLE DDDG  VNRIEQ EDGE+VESE
Sbjct: 301 CQALDWKLRHKTECAPFDRWLIEDDDLEGDDDGD-VNRIEQLEDGEDVESE 350

[Close]

BLAST of Lcy06g004920 vs. ExPASy TrEMBL
Match: A0A6J1JZ31 (F-box protein At5g50450-like OS=Cucurbita maxima OX=3661 GN=LOC111490141 PE=4 SV=1)

HSP 1 Score: 646.4 bits (1666), Expect = 7.1e-182
Identity = 316/351 (90.03%), Postives = 332/351 (94.59%), Query Frame = 0


Query: 1   MLCNKRRRTSSSTGAGISDLFDGLPDDLVVVVLGKLSATASSPSDLVNVMITCKRFNRLA 60
           M+CNKRRRTS++T AGI DLFD LPDDL+V++LGKLSA ASSPSDLVNVM+TCKRFNRLA
Sbjct: 1   MVCNKRRRTSTTTAAGIHDLFDDLPDDLLVLLLGKLSANASSPSDLVNVMLTCKRFNRLA 60

Query: 61  LHPFVLSKAGPKAFEIRTKNWCESSHRFLKLCVSAGSVEACYTLGMIEFYCLKNRGNGAS 120
           LHP VLSKAGPKAFEIR KNWCES+HRFLKLCVSAG+VEACYTLGM+EFYC+KNRGNGAS
Sbjct: 61  LHPMVLSKAGPKAFEIRIKNWCESTHRFLKLCVSAGNVEACYTLGMVEFYCMKNRGNGAS 120

Query: 121 LMAKAAIKSHPLALYSLAIIQFNGSGGSKSDKNLRAGVALCGRAAYLGHIDALRELGHCL 180
           LMAKAAIKSHPLALYSLAI+QFNGSGGSKSDKNLRAGVALCGRAA LGHIDALRELGHCL
Sbjct: 121 LMAKAAIKSHPLALYSLAIVQFNGSGGSKSDKNLRAGVALCGRAACLGHIDALRELGHCL 180

Query: 181 QDGYGVAENASEGRRLLIEANARELASITNSSLRRLNCSGDRLSPTDSAGSLLSDFGCNI 240
           QDGYGVA+NASEGRRLLIEANARELASITNSSLRRLNCS DR S TDS+GSLLSDFG NI
Sbjct: 181 QDGYGVAQNASEGRRLLIEANARELASITNSSLRRLNCSVDRPSTTDSSGSLLSDFGYNI 240

Query: 241 PAPEAHPANQFLRDWFASGRGCIAEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCSRG 300
           PAPE HPANQFLRDWF SGRG IAEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCSRG
Sbjct: 241 PAPEVHPANQFLRDWFTSGRGFIAEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCSRG 300

Query: 301 CQALDWKLRHKTECAPFDRWLIEDDDLEIDDDGGVVNRIEQFEDGENVESE 352
           CQALDWKL+HKTECAPFDRWLIEDDDLE DDD G VNRIEQF DG NVE+E
Sbjct: 301 CQALDWKLQHKTECAPFDRWLIEDDDLEDDDDDG-VNRIEQFGDGVNVETE 350

[Close]

BLAST of Lcy06g004920 vs. NCBI nr
Match: XP_004154118.1 (F-box protein At1g67340 [Cucumis sativus] >KGN64409.1 hypothetical protein Csa_013400 [Cucumis sativus])

HSP 1 Score: 661.4 bits (1705), Expect = 4.4e-186
Identity = 323/351 (92.02%), Postives = 333/351 (94.87%), Query Frame = 0


Query: 1   MLCNKRRRTSSSTGAGISDLFDGLPDDLVVVVLGKLSATASSPSDLVNVMITCKRFNRLA 60
           MLCNKRRRTS+S   GISDLFDGLPDDLVVVVLGKLSATASSP DLVNVMITCKRFNRLA
Sbjct: 1   MLCNKRRRTSTSAATGISDLFDGLPDDLVVVVLGKLSATASSPLDLVNVMITCKRFNRLA 60

Query: 61  LHPFVLSKAGPKAFEIRTKNWCESSHRFLKLCVSAGSVEACYTLGMIEFYCLKNRGNGAS 120
           LHP VLSKAGPKAFEI+TKNW ES+HRFLKLCVSAG+VEACYTLGMIEFYCLKNRG GAS
Sbjct: 61  LHPIVLSKAGPKAFEIQTKNWSESTHRFLKLCVSAGNVEACYTLGMIEFYCLKNRGTGAS 120

Query: 121 LMAKAAIKSHPLALYSLAIIQFNGSGGSKSDKNLRAGVALCGRAAYLGHIDALRELGHCL 180
           LMAKAAIKSHPLALYSLAI+QFNGSGGSKSDKNLRAGVALCGRAAYLGHIDALRELGHCL
Sbjct: 121 LMAKAAIKSHPLALYSLAIVQFNGSGGSKSDKNLRAGVALCGRAAYLGHIDALRELGHCL 180

Query: 181 QDGYGVAENASEGRRLLIEANARELASITNSSLRRLNCSGDRLSPTDSAGSLLSDFGCNI 240
           QDGYGV +N SEGRRLLIEANARELA ITNSSLRRL+CS  R S TDS GSLLSDFGCN 
Sbjct: 181 QDGYGVPQNVSEGRRLLIEANARELAYITNSSLRRLHCSRHRQSATDSGGSLLSDFGCNF 240

Query: 241 PAPEAHPANQFLRDWFASGRGCIAEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCSRG 300
           PAPEAHPANQFLRDWFASGRG IAEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCSRG
Sbjct: 241 PAPEAHPANQFLRDWFASGRGSIAEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCSRG 300

Query: 301 CQALDWKLRHKTECAPFDRWLIEDDDLEIDDDGGVVNRIEQFEDGENVESE 352
           CQALDWKLRHKTECAPFDRWLIE+D+LE DDDGGVVNRIEQF+DGENVESE
Sbjct: 301 CQALDWKLRHKTECAPFDRWLIEEDELEGDDDGGVVNRIEQFDDGENVESE 351

[Close]

BLAST of Lcy06g004920 vs. NCBI nr
Match: XP_008439699.1 (PREDICTED: F-box protein At1g67340 [Cucumis melo] >KAA0055331.1 F-box protein [Cucumis melo var. makuwa] >TYJ99256.1 F-box protein [Cucumis melo var. makuwa])

HSP 1 Score: 660.6 bits (1703), Expect = 7.5e-186
Identity = 325/351 (92.59%), Postives = 335/351 (95.44%), Query Frame = 0


Query: 1   MLCNKRRRTSSSTGAGISDLFDGLPDDLVVVVLGKLSATASSPSDLVNVMITCKRFNRLA 60
           MLCNKRRRTS+S GAGISDLFDGLPDDLVVVVLGKLSATASSPSDLVNVMITCKRFNRLA
Sbjct: 1   MLCNKRRRTSTSAGAGISDLFDGLPDDLVVVVLGKLSATASSPSDLVNVMITCKRFNRLA 60

Query: 61  LHPFVLSKAGPKAFEIRTKNWCESSHRFLKLCVSAGSVEACYTLGMIEFYCLKNRGNGAS 120
           LHP VLSKAGPKAFEI+TKNW ES+HRFLKLCVSAG+VEACYTLGMIEFYCLKNRG GAS
Sbjct: 61  LHPIVLSKAGPKAFEIQTKNWSESTHRFLKLCVSAGNVEACYTLGMIEFYCLKNRGTGAS 120

Query: 121 LMAKAAIKSHPLALYSLAIIQFNGSGGSKSDKNLRAGVALCGRAAYLGHIDALRELGHCL 180
           LMAKAAIKSHPLALYSLAI+QFNGSGGSKSDKNLRAGVALCGRAAYLGHIDALRELGHCL
Sbjct: 121 LMAKAAIKSHPLALYSLAIVQFNGSGGSKSDKNLRAGVALCGRAAYLGHIDALRELGHCL 180

Query: 181 QDGYGVAENASEGRRLLIEANARELASITNSSLRRLNCSGDRLSPTDSAGSLLSDFGCNI 240
           QDGYGV +NASEGRRLLIEANARELA ITNSSLRRL+CS  R S TDS GSLLSDFGCN 
Sbjct: 181 QDGYGVPQNASEGRRLLIEANARELAYITNSSLRRLHCSSHRQSATDSGGSLLSDFGCNF 240

Query: 241 PAPEAHPANQFLRDWFASGRGCIAEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCSRG 300
           PAPEAHPANQFLRDWFASGRG IAEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCSRG
Sbjct: 241 PAPEAHPANQFLRDWFASGRGSIAEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCSRG 300

Query: 301 CQALDWKLRHKTECAPFDRWLIEDDDLEIDDDGGVVNRIEQFEDGENVESE 352
           CQALDWKLRHKTECAPFDRWLIED++LE D+DGG VNRIEQF DGENVESE
Sbjct: 301 CQALDWKLRHKTECAPFDRWLIEDEELEGDEDGG-VNRIEQFGDGENVESE 350

[Close]

BLAST of Lcy06g004920 vs. NCBI nr
Match: XP_038894785.1 (F-box protein At1g67340 [Benincasa hispida])

HSP 1 Score: 650.6 bits (1677), Expect = 7.8e-183
Identity = 321/351 (91.45%), Postives = 330/351 (94.02%), Query Frame = 0


Query: 1   MLCNKRRRTSSSTGAGISDLFDGLPDDLVVVVLGKLSATASSPSDLVNVMITCKRFNRLA 60
           MLCNKRRRTS+S  AGISDLFDGLPDDLVVVVLGKLSATASSPSDLVNVMITCKRFNRLA
Sbjct: 1   MLCNKRRRTSTSAAAGISDLFDGLPDDLVVVVLGKLSATASSPSDLVNVMITCKRFNRLA 60

Query: 61  LHPFVLSKAGPKAFEIRTKNWCESSHRFLKLCVSAGSVEACYTLGMIEFYCLKNRGNGAS 120
           LHP VLSKAGPK FEI TKNW ES+HRFLKLCVSAG+VEACYTLGMIEFYCLKNRG+GAS
Sbjct: 61  LHPIVLSKAGPKLFEILTKNWSESTHRFLKLCVSAGNVEACYTLGMIEFYCLKNRGSGAS 120

Query: 121 LMAKAAIKSHPLALYSLAIIQFNGSGGSKSDKNLRAGVALCGRAAYLGHIDALRELGHCL 180
           LMAKAAIKSHPLALYSLAI+QFNGSGGSKSDKNLRAGVALCGRAAYLGHIDALRELGHCL
Sbjct: 121 LMAKAAIKSHPLALYSLAIVQFNGSGGSKSDKNLRAGVALCGRAAYLGHIDALRELGHCL 180

Query: 181 QDGYGVAENASEGRRLLIEANARELASITNSSLRRLNCSGDRLSPTDSAGSLLSDFGCNI 240
           QDGYGV +NASEGRRLLIEANAREL SITNSSLRRL+CSGD  S  DS GSLLSDFGCN 
Sbjct: 181 QDGYGVPQNASEGRRLLIEANARELTSITNSSLRRLHCSGDLPSAMDSGGSLLSDFGCNF 240

Query: 241 PAPEAHPANQFLRDWFASGRGCIAEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCSRG 300
           PA EAHPAN+FLRDWFASGRG +AEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCSRG
Sbjct: 241 PAAEAHPANRFLRDWFASGRGFVAEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCSRG 300

Query: 301 CQALDWKLRHKTECAPFDRWLIEDDDLEIDDDGGVVNRIEQFEDGENVESE 352
           CQALDWKLRHKTECAPFDRWLIEDDDLE  DD G VNRIEQF DGENVESE
Sbjct: 301 CQALDWKLRHKTECAPFDRWLIEDDDLE-GDDNGDVNRIEQFGDGENVESE 350

[Close]

BLAST of Lcy06g004920 vs. NCBI nr
Match: KAG6584151.1 (F-box protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 648.3 bits (1671), Expect = 3.9e-182
Identity = 319/351 (90.88%), Postives = 331/351 (94.30%), Query Frame = 0


Query: 1   MLCNKRRRTSSSTGAGISDLFDGLPDDLVVVVLGKLSATASSPSDLVNVMITCKRFNRLA 60
           M+CNKRRRTS+ST AGISDLFDGLPDDLVVVVLGKLSA ASSPSD+VNVMITCKRFNRLA
Sbjct: 1   MVCNKRRRTSTSTDAGISDLFDGLPDDLVVVVLGKLSAAASSPSDIVNVMITCKRFNRLA 60

Query: 61  LHPFVLSKAGPKAFEIRTKNWCESSHRFLKLCVSAGSVEACYTLGMIEFYCLKNRGNGAS 120
           LHPFVL KAGPK FEI+T NW ES+HRFLKLCVSAG+VEACYTLGMIEFYCLKNRG+GAS
Sbjct: 61  LHPFVLKKAGPKVFEIQTINWSESTHRFLKLCVSAGNVEACYTLGMIEFYCLKNRGSGAS 120

Query: 121 LMAKAAIKSHPLALYSLAIIQFNGSGGSKSDKNLRAGVALCGRAAYLGHIDALRELGHCL 180
           LMAKAAIKSHPLALYSLAI+QFNGSGGSKSDKNLRAGVALCGRAAYLGHIDALRELGHCL
Sbjct: 121 LMAKAAIKSHPLALYSLAIVQFNGSGGSKSDKNLRAGVALCGRAAYLGHIDALRELGHCL 180

Query: 181 QDGYGVAENASEGRRLLIEANARELASITNSSLRRLNCSGDRLSPTDSAGSLLSDFGCNI 240
           QDGYGVA+NASEGRRLLIEANARELASITNSSL RL+C GDR   TDS+ SLLSDFGC  
Sbjct: 181 QDGYGVAQNASEGRRLLIEANARELASITNSSLLRLHCCGDRPPATDSSESLLSDFGCKF 240

Query: 241 PAPEAHPANQFLRDWFASGRGCIAEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCSRG 300
           PAPE HPANQFLRDWFASGRG IAEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCSRG
Sbjct: 241 PAPETHPANQFLRDWFASGRGFIAEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCSRG 300

Query: 301 CQALDWKLRHKTECAPFDRWLIEDDDLEIDDDGGVVNRIEQFEDGENVESE 352
           CQALDWKLRHKTECAPFDRWLIEDDDLE DDDG  VNRIEQ EDGE+VESE
Sbjct: 301 CQALDWKLRHKTECAPFDRWLIEDDDLEGDDDGD-VNRIEQLEDGEDVESE 350

[Close]

BLAST of Lcy06g004920 vs. NCBI nr
Match: XP_022923648.1 (F-box protein At5g50450-like [Cucurbita moschata])

HSP 1 Score: 646.7 bits (1667), Expect = 1.1e-181
Identity = 318/351 (90.60%), Postives = 331/351 (94.30%), Query Frame = 0


Query: 1   MLCNKRRRTSSSTGAGISDLFDGLPDDLVVVVLGKLSATASSPSDLVNVMITCKRFNRLA 60
           M+CNKRRRTS+ST AGISDLFDGLPDDLVVVVLGKLSA ASSPSD+VNVMITCKRFNRLA
Sbjct: 1   MVCNKRRRTSTSTDAGISDLFDGLPDDLVVVVLGKLSAAASSPSDIVNVMITCKRFNRLA 60

Query: 61  LHPFVLSKAGPKAFEIRTKNWCESSHRFLKLCVSAGSVEACYTLGMIEFYCLKNRGNGAS 120
           LHPFVL KAGPK FEI+T NW ES+HRFLKLCVSAG+VEACYTLGMIEFYCLKNRG+GAS
Sbjct: 61  LHPFVLKKAGPKVFEIQTINWSESTHRFLKLCVSAGNVEACYTLGMIEFYCLKNRGSGAS 120

Query: 121 LMAKAAIKSHPLALYSLAIIQFNGSGGSKSDKNLRAGVALCGRAAYLGHIDALRELGHCL 180
           LMAKAAIKSHPLALYSLAI+QFNGSGGSKSDKNLRAGVALCGRAAYLGHIDALRELGHCL
Sbjct: 121 LMAKAAIKSHPLALYSLAIVQFNGSGGSKSDKNLRAGVALCGRAAYLGHIDALRELGHCL 180

Query: 181 QDGYGVAENASEGRRLLIEANARELASITNSSLRRLNCSGDRLSPTDSAGSLLSDFGCNI 240
           QDGYGVA+NASEGRRLLIEANARELASITNSSL RL+C GD+   TDS+ SLLSDFGC  
Sbjct: 181 QDGYGVAQNASEGRRLLIEANARELASITNSSLLRLHCCGDQPPATDSSESLLSDFGCKF 240

Query: 241 PAPEAHPANQFLRDWFASGRGCIAEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCSRG 300
           PAPE HPANQFLRDWFASGRG IAEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCSRG
Sbjct: 241 PAPETHPANQFLRDWFASGRGFIAEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCSRG 300

Query: 301 CQALDWKLRHKTECAPFDRWLIEDDDLEIDDDGGVVNRIEQFEDGENVESE 352
           CQALDWKLRHKTECAPFDRWLIEDDDLE DDDG  VNRIEQ EDGE+VESE
Sbjct: 301 CQALDWKLRHKTECAPFDRWLIEDDDLEGDDDGD-VNRIEQLEDGEDVESE 350

[Close]

BLAST of Lcy06g004920 vs. TAIR 10
Match: AT1G67340.1 (HCP-like superfamily protein with MYND-type zinc finger )

HSP 1 Score: 441.4 bits (1134), Expect = 6.7e-124
Identity = 217/336 (64.58%), Postives = 260/336 (77.38%), Query Frame = 0


Query: 11  SSTGAGISDLFDGLPDDLVVVVLGKLSATASSPSDLVNVMITCKRFNRLALHPFVLSKAG 70
           ++TGA   DL D +PDDLV+ +L KL +T+  P+D +NV++TCKR   LA++P VLS+  
Sbjct: 37  NTTGA---DLLDSIPDDLVISILCKLGSTSRCPADFINVLLTCKRLKGLAMNPIVLSRLS 96

Query: 71  PKAFEIRTKNWCESSHRFLKLCVSAGSVEACYTLGMIEFYCLKNRGNGASLMAKAAIKSH 130
           PKA  ++  NW E SHRFLK CV AGS+EACYTLGMI FYCL+NRGNGASLMAKAAI SH
Sbjct: 97  PKAIAVKAHNWSEYSHRFLKRCVDAGSLEACYTLGMIRFYCLQNRGNGASLMAKAAISSH 156

Query: 131 PLALYSLAIIQFNGSGGSKSDKNLRAGVALCGRAAYLGHIDALRELGHCLQDGYGVAENA 190
             ALYSLA+IQFNGSGGSK+DK+LRAGVALC RAA+LGH+DALRELGHCLQDGYGV +N 
Sbjct: 157 APALYSLAVIQFNGSGGSKNDKDLRAGVALCARAAFLGHVDALRELGHCLQDGYGVPQNV 216

Query: 191 SEGRRLLIEANARELASITNSSLRR----LNCSGDRLSPTDSAGS----LLSDFGCNIPA 250
           SEGRR L++ANARELA++ +S ++     L+ S        + G     LLSDFGCN+PA
Sbjct: 217 SEGRRFLVQANARELAAVLSSGIQARSTWLSLSQPPPPVVPNHGQQTCPLLSDFGCNVPA 276

Query: 251 PEAHPANQFLRDWFA-SGRGCIAEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCSRGC 310
           PE HPAN+FL DWFA  G  C  +GLRLCS++GCGRPETR HEFRRCSVCG VNYCSR C
Sbjct: 277 PETHPANRFLADWFAVRGGDCPGDGLRLCSHAGCGRPETRKHEFRRCSVCGVVNYCSRAC 336

Query: 311 QALDWKLRHKTECAPFDRWLIEDD----DLEIDDDG 334
           QALDWKLRHK +CAP  RWL E D    +++ID +G
Sbjct: 337 QALDWKLRHKMDCAPVQRWLEEGDGGEGNVQIDGNG 369

[Close]

BLAST of Lcy06g004920 vs. TAIR 10
Match: AT5G50450.1 (HCP-like superfamily protein with MYND-type zinc finger )

HSP 1 Score: 414.1 bits (1063), Expect = 1.1e-115
Identity = 203/333 (60.96%), Postives = 249/333 (74.77%), Query Frame = 0


Query: 4   NKRRRTSSSTGAGISDLFDGLPDDLVVVVLGKLSATASSPSDLVNVMITCKRFNRLALHP 63
           NK++R  ++    +++ F+ L DDL++ +L KL+ +ASSPSD + V+ TCKR NRL LHP
Sbjct: 5   NKKQRLENNHNNTVNNHFEDLHDDLIISILRKLATSASSPSDFLTVLSTCKRLNRLGLHP 64

Query: 64  FVLSKAGPKAFEIRTKNWCESSHRFLKLCVSAGSVEACYTLGMIEFYCLKNRGNGASLMA 123
            VLSKAG +   +  + W +SSH+FLKLCV+AG+++A Y+LGMI FYCL+N  +GASLMA
Sbjct: 65  LVLSKAGTQTLAVTAEKWSDSSHKFLKLCVNAGNIDASYSLGMIRFYCLQNPVSGASLMA 124

Query: 124 KAAIKSHPLALYSLAIIQFNGSGGSKSDKNLRAGVALCGRAAYLGHIDALRELGHCLQDG 183
           KAAIKSH  ALYSL++IQFNGSGGSK+DKNLRAGVALC R+AYLGH+DALRELGHCLQDG
Sbjct: 125 KAAIKSHAPALYSLSVIQFNGSGGSKTDKNLRAGVALCARSAYLGHVDALRELGHCLQDG 184

Query: 184 YGVAENASEGRRLLIEANARELASITNSSLRRLNCSGDRLSPTDSAGSLLSDFGCNIPAP 243
           YGV  + SEGRRLLI+ANARELA    S L     SGD           L+D    +P  
Sbjct: 185 YGVPRDVSEGRRLLIQANARELACSLRSYLSLK--SGDE-------NETLTDLSV-VPVQ 244

Query: 244 EAHPANQFLRDWFASGRGCIAEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCSRGCQA 303
           E HP N+FL++WF+SGR  +AEGLR+CS+ GCGRPETR HEFRRCSVCG VNYCSRGCQA
Sbjct: 245 EIHPVNRFLKEWFSSGRVDLAEGLRMCSHGGCGRPETRAHEFRRCSVCGKVNYCSRGCQA 304

Query: 304 LDWKLRHKTECAPFDRWLIEDDDLEIDDDGGVV 337
           LDW+ +HK EC P D W+      EI DDG  V
Sbjct: 305 LDWRAKHKVECTPLDLWVAA--AAEIGDDGEAV 325

[Close]

BLAST of Lcy06g004920 vs. TAIR 10
Match: AT2G24640.1 (ubiquitin-specific protease 19 )

HSP 1 Score: 46.6 bits (109), Expect = 4.8e-05
Identity = 23/61 (37.70%), Postives = 32/61 (52.46%), Query Frame = 0


Query: 273 SGCGRPETRLHEFRRCSVCGNVNYCSRGCQALDWKLRHKTECAPF---DRWLIEDDDLEI 331
           S CG+  T     ++CS C +V YCS  CQ  DWK  HK +C  F   D   +  DD++ 
Sbjct: 65  SVCGKATT-----KKCSRCKSVRYCSAACQTSDWKSGHKLKCKGFRSTDSSPVRRDDIDF 120

[Close]

BLAST of Lcy06g004920 vs. TAIR 10
Match: AT1G17110.1 (ubiquitin-specific protease 15 )

HSP 1 Score: 44.3 bits (103), Expect = 2.4e-04
Identity = 17/46 (36.96%), Postives = 25/46 (54.35%), Query Frame = 0


Query: 287 RCSVCGNVNYCSRGCQALDWKLRHKTECAPFDRWLIEDDDLEIDDD 333
           RCS C +V YCS  CQ + W++ HK EC P +      + +  + D
Sbjct: 140 RCSRCKSVRYCSGKCQIIHWRVAHKDECVPVESCSSSSERVSFEKD 185

[Close]

BLAST of Lcy06g004920 vs. TAIR 10
Match: AT1G17110.2 (ubiquitin-specific protease 15 )

HSP 1 Score: 44.3 bits (103), Expect = 2.4e-04
Identity = 17/46 (36.96%), Postives = 25/46 (54.35%), Query Frame = 0


Query: 287 RCSVCGNVNYCSRGCQALDWKLRHKTECAPFDRWLIEDDDLEIDDD 333
           RCS C +V YCS  CQ + W++ HK EC P +      + +  + D
Sbjct: 140 RCSRCKSVRYCSGKCQIIHWRVAHKDECVPVESCSSSSERVSFEKD 185

The following BLAST results are available for this feature:

BLAST of Lcy06g004920 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FYF9	9.4e-123	64.58	F-box protein At1g67340 OS=Arabidopsis thaliana OX=3702 GN=At1g67340 PE=1 SV=1	[more]
Q9FK27	1.6e-114	60.96	F-box protein At5g50450 OS=Arabidopsis thaliana OX=3702 GN=At5g50450 PE=2 SV=1	[more]
Q2YDC9	4.7e-05	41.07	Programmed cell death protein 2 OS=Bos taurus OX=9913 GN=PDCD2 PE=2 SV=1	[more]
Q09415	3.0e-04	47.62	SET domain-containing protein 14 OS=Caenorhabditis elegans OX=6239 GN=set-14 PE=...	[more]
Q9SJA1	6.7e-04	37.70	Ubiquitin carboxyl-terminal hydrolase 19 OS=Arabidopsis thaliana OX=3702 GN=UBP1...	[more]

BLAST of Lcy06g004920 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LTV0	2.1e-186	92.02	MYND-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G050480 P...	[more]
A0A5A7UP50	3.6e-186	92.59	F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G004680...	[more]
A0A1S3AZD5	3.6e-186	92.59	F-box protein At1g67340 OS=Cucumis melo OX=3656 GN=LOC103484413 PE=4 SV=1	[more]
A0A6J1EA77	5.4e-182	90.60	F-box protein At5g50450-like OS=Cucurbita moschata OX=3662 GN=LOC111431294 PE=4 ...	[more]
A0A6J1JZ31	7.1e-182	90.03	F-box protein At5g50450-like OS=Cucurbita maxima OX=3661 GN=LOC111490141 PE=4 SV...	[more]

BLAST of Lcy06g004920 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004154118.1	4.4e-186	92.02	F-box protein At1g67340 [Cucumis sativus] >KGN64409.1 hypothetical protein Csa_0...	[more]
XP_008439699.1	7.5e-186	92.59	PREDICTED: F-box protein At1g67340 [Cucumis melo] >KAA0055331.1 F-box protein [C...	[more]
XP_038894785.1	7.8e-183	91.45	F-box protein At1g67340 [Benincasa hispida]	[more]
KAG6584151.1	3.9e-182	90.88	F-box protein, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022923648.1	1.1e-181	90.60	F-box protein At5g50450-like [Cucurbita moschata]	[more]

BLAST of Lcy06g004920 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G67340.1	6.7e-124	64.58	HCP-like superfamily protein with MYND-type zinc finger	[more]
AT5G50450.1	1.1e-115	60.96	HCP-like superfamily protein with MYND-type zinc finger	[more]
AT2G24640.1	4.8e-05	37.70	ubiquitin-specific protease 19	[more]
AT1G17110.1	2.4e-04	36.96	ubiquitin-specific protease 15	[more]
AT1G17110.2	2.4e-04	36.96	ubiquitin-specific protease 15	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	6.10.140.2220		coord: 264..316 e-value: 4.8E-11 score: 44.3
None	No IPR available	PANTHER	PTHR46758:SF9	HCP FAMILY PROTEIN WITH MYND-TYPE ZINC FINGER PROTEIN	coord: 1..344
None	No IPR available	SUPERFAMILY	81901	HCP-like	coord: 82..200
None	No IPR available	SUPERFAMILY	144232	HIT/MYND zinc finger-like	coord: 269..319
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 73..216 e-value: 5.2E-15 score: 57.2
IPR002893	Zinc finger, MYND-type	PFAM	PF01753	zf-MYND	coord: 274..314 e-value: 2.9E-8 score: 33.7
IPR002893	Zinc finger, MYND-type	PROSITE	PS50865	ZF_MYND_2	coord: 272..314 score: 11.205131
IPR044508	F-box protein At5g50450/At1g67340-like	PANTHER	PTHR46758	MYND DOMAIN-CONTAINING	coord: 1..344
IPR036047	F-box-like domain superfamily	SUPERFAMILY	81383	F-box domain	coord: 18..75

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy06g004920.1	Lcy06g004920.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0005515	protein binding