Lcy06g003930 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy06g003930
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	Glutaredoxin
Location	Chr06: 3669123 .. 3670703 (-)
RNA-Seq Expression	Lcy06g003930
Synteny	Lcy06g003930

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGTCGTGGTTCAGCTCGAACAAATTCAGTAAAGCAGAGCTGGAACTGGCGCTGAACGAGGCCAAGAAGATAATCTCCTCTGACCCTGTTGTTGTTTTCAGGTTCTATCACTACCCCAGAACAAAAATTTTCAAATTCTCTTTGGGTTTTGATTTGATCTTCCTCGTATGAAGTTCTTATCGATTCTCCCCACCATTTCCTTTTCATCACTATGTGTGGTGATCAATTACGTACAAAATGTTGAATAGTTAACTCTTATTGCTAAGAGAATTGGCTTAGTTGTTATCGCTAGTGAAGATTGAAGAACGCTTGAAATTTGGGAAGGTTGTTCTCTTTATGATTCAATAATTCTTTGTTTCACATGGCAGTAAGACTTATTGTGGGTTTTGCGCGAGTGTCAAGGAGTTGCTCACACAGCTTGGAGCTAATTTTAAGGTCATTGAATTGAACCAAAAAAGTAAGTATAATTTGTGTCTGAGACTGCTACAAATTTCCATGGTTTTGTCTATAAATGTTTGTTCTAGGGTGTGTTCTTTTACTATAACATGACCTTGCTCTATCTTGACTTAGTATTGAATTAGCTGAAAATTGAAGTTGAAAGATACTTGCTATTTGCAACTTGGAAGTTGGGGTTTCCCCTTTTATTTCTTCTATAGGGACTGCACAAGTGACTGTGACTTATGAGCTTATAGTTGACTGATGAGACTGAAAATTTAAAAGGAGATTTATTTGCGAGTAATACCCTTAAACTTTAGCCTGCATGAAATAATGTGTACTTATATTATGTTTTTGAAATCACCTCACATCAAAATCTTCATTGGTGTTTATTGAAAAGTTTTTTTTCTTTTTCCTTTTTCGGGTTCAACAATTGTAGGATGGGGATCGAACCCTCATATTTAGAATGGTAATTGGTGCATTATTCTCGAAACTATGTTTAGATTGGCACTAAGCAAACTTTTCAATAAACCCATGAGTAACTTTTGCAACTTACTCTTAAAAGAAACCAATGGTGGGCTGGAAAACCCCATAGTTGCTGGGAGTCTCATCCAATCTCATGTTCAATACACTATCAGCCCCTTTTCTTCATTGTTTTGAGTAAAATAATCAATATTGACTGCATATTCTGGATGAATCAATTCACAAGATAAAACATGAAGAGTACAATGAATGTTTCTCTTGTTTATATGATGACATGTGTGTTTGCCTAATTTTCGGGTCGCTACAATCACGATCAGCATCAATTGAATATTAATGACTGTGTTGTATCCCATTACAAGTTCTTTGATTCATCTATATGAAGGTGATGGAGATGCAATTCAGTCAGCTTTAGCAGAGTGGACGGGTCAAACCACGGTGCCAAACGTGTTTATCGGAGGAAAGCACATCGGTGGTTGCGATGGTAAGGCCAGCTGATTTCTCTGCATTAATGTCTAGTTAGTGTGTGCTCCTCCCAAAATTTTCTCATCTTCTATCTCCATTTGGGTCGCTGCAGCGGTTACAGAGAAGCACAACAGAGGGCAGCTGGTGCCACTTCTCACTGATGCTGGTGCCTTTGCCAAGAACTCTGCTCAGCTGTGA

mRNA sequence

ATGGGGTCGTGGTTCAGCTCGAACAAATTCAGTAAAGCAGAGCTGGAACTGGCGCTGAACGAGGCCAAGAAGATAATCTCCTCTGACCCTGTTGTTGTTTTCAGTAAGACTTATTGTGGGTTTTGCGCGAGTGTCAAGGAGTTGCTCACACAGCTTGGAGCTAATTTTAAGGTCATTGAATTGAACCAAAAAAGTGATGGAGATGCAATTCAGTCAGCTTTAGCAGAGTGGACGGGTCAAACCACGGTGCCAAACGTGTTTATCGGAGGAAAGCACATCGGTGGTTGCGATGCGGTTACAGAGAAGCACAACAGAGGGCAGCTGGTGCCACTTCTCACTGATGCTGGTGCCTTTGCCAAGAACTCTGCTCAGCTGTGA

Coding sequence (CDS)

ATGGGGTCGTGGTTCAGCTCGAACAAATTCAGTAAAGCAGAGCTGGAACTGGCGCTGAACGAGGCCAAGAAGATAATCTCCTCTGACCCTGTTGTTGTTTTCAGTAAGACTTATTGTGGGTTTTGCGCGAGTGTCAAGGAGTTGCTCACACAGCTTGGAGCTAATTTTAAGGTCATTGAATTGAACCAAAAAAGTGATGGAGATGCAATTCAGTCAGCTTTAGCAGAGTGGACGGGTCAAACCACGGTGCCAAACGTGTTTATCGGAGGAAAGCACATCGGTGGTTGCGATGCGGTTACAGAGAAGCACAACAGAGGGCAGCTGGTGCCACTTCTCACTGATGCTGGTGCCTTTGCCAAGAACTCTGCTCAGCTGTGA

Protein sequence

MGSWFSSNKFSKAELELALNEAKKIISSDPVVVFSKTYCGFCASVKELLTQLGANFKVIELNQKSDGDAIQSALAEWTGQTTVPNVFIGGKHIGGCDAVTEKHNRGQLVPLLTDAGAFAKNSAQL

Homology

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BLAST of Lcy06g003930 vs. ExPASy Swiss-Prot
Match: Q8L8T2 (Glutaredoxin-C1 OS=Arabidopsis thaliana OX=3702 GN=GRXC1 PE=2 SV=2)

HSP 1 Score: 182.6 bits (462), Expect = 2.8e-45
Identity = 86/125 (68.80%), Postives = 105/125 (84.00%), Query Frame = 0


Query: 1   MGSWFSSNKFSKAELELALNEAKKIISSDPVVVFSKTYCGFCASVKELLTQLGANFKVIE 60
           MGS FS N+ SK E+E+ +N+AK+I+S+ PVVVFSKTYCG+C  VK+LLTQLGA FKV+E
Sbjct: 1   MGSMFSGNRMSKEEMEVVVNKAKEIVSAYPVVVFSKTYCGYCQRVKQLLTQLGATFKVLE 60

Query: 61  LNQKSDGDAIQSALAEWTGQTTVPNVFIGGKHIGGCDAVTEKHNRGQLVPLLTDAGAFAK 120
           L++ SDG  IQSAL+EWTGQTTVPNVFI G HIGGCD V E + +G+LVPLLT+AGA A 
Sbjct: 61  LDEMSDGGEIQSALSEWTGQTTVPNVFIKGNHIGGCDRVMETNKQGKLVPLLTEAGAIAD 120

Query: 121 NSAQL 126
           NS+QL
Sbjct: 121 NSSQL 125

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BLAST of Lcy06g003930 vs. ExPASy Swiss-Prot
Match: P55143 (Glutaredoxin OS=Ricinus communis OX=3988 PE=3 SV=1)

HSP 1 Score: 156.0 bits (393), Expect = 2.8e-37
Identity = 70/101 (69.31%), Postives = 88/101 (87.13%), Query Frame = 0


Query: 17  LALNEAKKIISSDPVVVFSKTYCGFCASVKELLTQLGANFKVIELNQKSDGDAIQSALAE 76
           +A+ + K+++SS+ VVVFSKTYC +C SVK+LL QLGA +KV+EL+ +SDG  IQ+ALAE
Sbjct: 1   MAMTKTKELVSSNAVVVFSKTYCPYCTSVKKLLDQLGAKYKVVELDTESDGSEIQTALAE 60

Query: 77  WTGQTTVPNVFIGGKHIGGCDAVTEKHNRGQLVPLLTDAGA 118
           WTGQ TVPNVFIGGKHIGGCD+ T KH++GQLVPLLT+AGA
Sbjct: 61  WTGQRTVPNVFIGGKHIGGCDSTTAKHSQGQLVPLLTEAGA 101

[Close]

BLAST of Lcy06g003930 vs. ExPASy Swiss-Prot
Match: Q9ZR41 (Glutaredoxin OS=Solanum lycopersicum OX=4081 PE=3 SV=1)

HSP 1 Score: 153.3 bits (386), Expect = 1.8e-36
Identity = 70/106 (66.04%), Postives = 86/106 (81.13%), Query Frame = 0


Query: 17  LALNEAKKIISSDPVVVFSKTYCGFCASVKELLTQLGANFKVIELNQKSDGDAIQSALAE 76
           ++L +AK+I+S +PV VFSKTYC FC SVK+LL++LGA FK +EL+ + DG  IQ+ALAE
Sbjct: 1   MSLAKAKEIVSGNPVAVFSKTYCPFCVSVKDLLSKLGATFKAVELDSEKDGSEIQAALAE 60

Query: 77  WTGQTTVPNVFIGGKHIGGCDAVTEKHNRGQLVPLLTDAGAFAKNS 123
           WTGQ TVPNVFIG KHIGGCDA T  H  G+L+PLLT+AGA AK S
Sbjct: 61  WTGQRTVPNVFIGRKHIGGCDATTALHREGKLLPLLTEAGAIAKTS 106

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BLAST of Lcy06g003930 vs. ExPASy Swiss-Prot
Match: Q9FNE2 (Glutaredoxin-C2 OS=Arabidopsis thaliana OX=3702 GN=GRXC2 PE=3 SV=1)

HSP 1 Score: 151.4 bits (381), Expect = 6.9e-36
Identity = 70/107 (65.42%), Postives = 85/107 (79.44%), Query Frame = 0


Query: 17  LALNEAKKIISSDPVVVFSKTYCGFCASVKELLTQLGANFKVIELNQKSDGDAIQSALAE 76
           +A+ +AK+I++S+ VVVFSKTYC +C  VKELL QLGA FK +EL+ +SDG  IQS LAE
Sbjct: 1   MAMQKAKEIVNSESVVVFSKTYCPYCVRVKELLQQLGAKFKAVELDTESDGSQIQSGLAE 60

Query: 77  WTGQTTVPNVFIGGKHIGGCDAVTEKHNRGQLVPLLTDAGAFAKNSA 124
           WTGQ TVPNVFIGG HIGGCDA +  H  G+LVPLLT+AGA A  +A
Sbjct: 61  WTGQRTVPNVFIGGNHIGGCDATSNLHKDGKLVPLLTEAGAIAGKTA 107

[Close]

BLAST of Lcy06g003930 vs. ExPASy Swiss-Prot
Match: O81187 (Glutaredoxin OS=Vernicia fordii OX=73154 PE=3 SV=1)

HSP 1 Score: 148.7 bits (374), Expect = 4.5e-35
Identity = 67/101 (66.34%), Postives = 85/101 (84.16%), Query Frame = 0


Query: 17  LALNEAKKIISSDPVVVFSKTYCGFCASVKELLTQLGANFKVIELNQKSDGDAIQSALAE 76
           +A+ +A++++SS+ VVVFSKT+C +C SVK+LL QLGA FKVIEL+ +SDG  +Q+ALAE
Sbjct: 1   MAMIKAQELVSSNSVVVFSKTFCPYCTSVKQLLNQLGAQFKVIELDSESDGSDLQNALAE 60

Query: 77  WTGQTTVPNVFIGGKHIGGCDAVTEKHNRGQLVPLLTDAGA 118
           WTGQ TVPNVFIGGKHIGGCD  T  H  G+L+PLLT+AGA
Sbjct: 61  WTGQRTVPNVFIGGKHIGGCDKTTGMHQEGKLIPLLTEAGA 101

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BLAST of Lcy06g003930 vs. ExPASy TrEMBL
Match: U3RGD2 (Glutaredoxin OS=Cucumis sativus OX=3659 GN=GRX2 PE=2 SV=1)

HSP 1 Score: 230.7 bits (587), Expect = 3.3e-57
Identity = 111/125 (88.80%), Postives = 119/125 (95.20%), Query Frame = 0


Query: 1   MGSWFSSNKFSKAELELALNEAKKIISSDPVVVFSKTYCGFCASVKELLTQLGANFKVIE 60
           MGSWFSSNKFSK ELELALNE KKI+S+DPVVVFSKTYCGFC+SVK+LLTQLGA +KVIE
Sbjct: 1   MGSWFSSNKFSKEELELALNEVKKIVSTDPVVVFSKTYCGFCSSVKKLLTQLGARYKVIE 60

Query: 61  LNQKSDGDAIQSALAEWTGQTTVPNVFIGGKHIGGCDAVTEKHNRGQLVPLLTDAGAFAK 120
           L+QKSDGD IQSALAEWTGQTTVPNVFIGGKHIGGCDAVTEKH+RGQLVPLLT+AGA A 
Sbjct: 61  LDQKSDGDKIQSALAEWTGQTTVPNVFIGGKHIGGCDAVTEKHHRGQLVPLLTEAGAIAG 120

Query: 121 NSAQL 126
           NSAQL
Sbjct: 121 NSAQL 125

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BLAST of Lcy06g003930 vs. ExPASy TrEMBL
Match: A0A1S3AWQ0 (glutaredoxin OS=Cucumis melo OX=3656 GN=LOC103483635 PE=3 SV=1)

HSP 1 Score: 226.1 bits (575), Expect = 8.2e-56
Identity = 109/125 (87.20%), Postives = 118/125 (94.40%), Query Frame = 0


Query: 1   MGSWFSSNKFSKAELELALNEAKKIISSDPVVVFSKTYCGFCASVKELLTQLGANFKVIE 60
           MGSWFSSNKFSK ELE+ALNE KKIIS+DPVVVFSKTYCGFC+SVK+LLTQLGA +KVIE
Sbjct: 1   MGSWFSSNKFSKEELEVALNEVKKIISTDPVVVFSKTYCGFCSSVKKLLTQLGARYKVIE 60

Query: 61  LNQKSDGDAIQSALAEWTGQTTVPNVFIGGKHIGGCDAVTEKHNRGQLVPLLTDAGAFAK 120
           LNQ+S+GD IQSALAEWTGQTTVPNVFIGGKHIGGCDAVTEKH+RGQLVPLLT+AGA A 
Sbjct: 61  LNQESNGDKIQSALAEWTGQTTVPNVFIGGKHIGGCDAVTEKHHRGQLVPLLTEAGAIAG 120

Query: 121 NSAQL 126
           NSA L
Sbjct: 121 NSAPL 125

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BLAST of Lcy06g003930 vs. ExPASy TrEMBL
Match: A0A6J1C9R3 (glutaredoxin-C1 OS=Momordica charantia OX=3673 GN=LOC111008748 PE=3 SV=1)

HSP 1 Score: 224.9 bits (572), Expect = 1.8e-55
Identity = 109/125 (87.20%), Postives = 116/125 (92.80%), Query Frame = 0


Query: 1   MGSWFSSNKFSKAELELALNEAKKIISSDPVVVFSKTYCGFCASVKELLTQLGANFKVIE 60
           MGSWFSSNK SK ELE+ALNEAKKIISS PVVVFSKTYCGFC  VK+LLTQLGA++KVIE
Sbjct: 1   MGSWFSSNKKSKEELEMALNEAKKIISSHPVVVFSKTYCGFCTRVKQLLTQLGASYKVIE 60

Query: 61  LNQKSDGDAIQSALAEWTGQTTVPNVFIGGKHIGGCDAVTEKHNRGQLVPLLTDAGAFAK 120
           L+Q+SDGD IQSAL EWTGQ+TVPNVFIGGKHIGGCDAVTEKHNRGQLVPLLTDAGA A 
Sbjct: 61  LDQQSDGDTIQSALEEWTGQSTVPNVFIGGKHIGGCDAVTEKHNRGQLVPLLTDAGAIAN 120

Query: 121 NSAQL 126
           NSAQL
Sbjct: 121 NSAQL 125

[Close]

BLAST of Lcy06g003930 vs. ExPASy TrEMBL
Match: A0A6J1GRJ6 (glutaredoxin OS=Cucurbita moschata OX=3662 GN=LOC111456821 PE=3 SV=1)

HSP 1 Score: 214.2 bits (544), Expect = 3.2e-52
Identity = 104/125 (83.20%), Postives = 112/125 (89.60%), Query Frame = 0


Query: 1   MGSWFSSNKFSKAELELALNEAKKIISSDPVVVFSKTYCGFCASVKELLTQLGANFKVIE 60
           MGSWFSSNKF K E   +LNEAK IISS+PVVVFSKTYCG+C+ VKELLTQLGA+ KVIE
Sbjct: 1   MGSWFSSNKFCKEEQNQSLNEAKNIISSNPVVVFSKTYCGYCSRVKELLTQLGASHKVIE 60

Query: 61  LNQKSDGDAIQSALAEWTGQTTVPNVFIGGKHIGGCDAVTEKHNRGQLVPLLTDAGAFAK 120
           L+QKSDGDAIQSALAEWTGQT+VPNVFIGGKHIGGCDAVT KH+ GQLVPLL DAGA A 
Sbjct: 61  LDQKSDGDAIQSALAEWTGQTSVPNVFIGGKHIGGCDAVTNKHSSGQLVPLLADAGAIAN 120

Query: 121 NSAQL 126
           NSAQL
Sbjct: 121 NSAQL 125

[Close]

BLAST of Lcy06g003930 vs. ExPASy TrEMBL
Match: A0A5D3BJ77 (Glutaredoxin domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G003750 PE=3 SV=1)

HSP 1 Score: 213.8 bits (543), Expect = 4.2e-52
Identity = 104/120 (86.67%), Postives = 113/120 (94.17%), Query Frame = 0


Query: 6    SSNKFSKAELELALNEAKKIISSDPVVVFSKTYCGFCASVKELLTQLGANFKVIELNQKS 65
            SSNKFSK ELE+ALNE KKIIS+DPVVVFSKTYCGFC+SVK+LLTQLGA +KVIELNQ+S
Sbjct: 1021 SSNKFSKEELEVALNEVKKIISTDPVVVFSKTYCGFCSSVKKLLTQLGARYKVIELNQES 1080

Query: 66   DGDAIQSALAEWTGQTTVPNVFIGGKHIGGCDAVTEKHNRGQLVPLLTDAGAFAKNSAQL 125
            +GD IQSALAEWTGQTTVPNVFIGGKHIGGCDAVTEKH+RGQLVPLLT+AGA A NSA L
Sbjct: 1081 NGDKIQSALAEWTGQTTVPNVFIGGKHIGGCDAVTEKHHRGQLVPLLTEAGAIAGNSAPL 1140

[Close]

BLAST of Lcy06g003930 vs. NCBI nr
Match: NP_001274139.1 (glutaredoxin [Cucumis sativus] >AGX01494.1 glutaredoxin [Cucumis sativus] >KGN64321.1 hypothetical protein Csa_013966 [Cucumis sativus])

HSP 1 Score: 230.7 bits (587), Expect = 6.8e-57
Identity = 111/125 (88.80%), Postives = 119/125 (95.20%), Query Frame = 0


Query: 1   MGSWFSSNKFSKAELELALNEAKKIISSDPVVVFSKTYCGFCASVKELLTQLGANFKVIE 60
           MGSWFSSNKFSK ELELALNE KKI+S+DPVVVFSKTYCGFC+SVK+LLTQLGA +KVIE
Sbjct: 1   MGSWFSSNKFSKEELELALNEVKKIVSTDPVVVFSKTYCGFCSSVKKLLTQLGARYKVIE 60

Query: 61  LNQKSDGDAIQSALAEWTGQTTVPNVFIGGKHIGGCDAVTEKHNRGQLVPLLTDAGAFAK 120
           L+QKSDGD IQSALAEWTGQTTVPNVFIGGKHIGGCDAVTEKH+RGQLVPLLT+AGA A 
Sbjct: 61  LDQKSDGDKIQSALAEWTGQTTVPNVFIGGKHIGGCDAVTEKHHRGQLVPLLTEAGAIAG 120

Query: 121 NSAQL 126
           NSAQL
Sbjct: 121 NSAQL 125

[Close]

BLAST of Lcy06g003930 vs. NCBI nr
Match: XP_038894148.1 (glutaredoxin [Benincasa hispida])

HSP 1 Score: 229.6 bits (584), Expect = 1.5e-56
Identity = 111/125 (88.80%), Postives = 119/125 (95.20%), Query Frame = 0


Query: 1   MGSWFSSNKFSKAELELALNEAKKIISSDPVVVFSKTYCGFCASVKELLTQLGANFKVIE 60
           MGSWFSSNK SK ELELALNEAKKIISS+PVVVFSKTYCG+C+SVK+LLT+LGA +KVIE
Sbjct: 1   MGSWFSSNKLSKEELELALNEAKKIISSEPVVVFSKTYCGYCSSVKQLLTRLGAKYKVIE 60

Query: 61  LNQKSDGDAIQSALAEWTGQTTVPNVFIGGKHIGGCDAVTEKHNRGQLVPLLTDAGAFAK 120
           LNQKSDGD IQSALAEWTGQTTVPNVFIGGKHIGGCDAVTEKH+RGQLVPLLT+AGA A 
Sbjct: 61  LNQKSDGDKIQSALAEWTGQTTVPNVFIGGKHIGGCDAVTEKHHRGQLVPLLTEAGAIAG 120

Query: 121 NSAQL 126
           NSAQL
Sbjct: 121 NSAQL 125

[Close]

BLAST of Lcy06g003930 vs. NCBI nr
Match: XP_008438572.1 (PREDICTED: glutaredoxin [Cucumis melo])

HSP 1 Score: 226.1 bits (575), Expect = 1.7e-55
Identity = 109/125 (87.20%), Postives = 118/125 (94.40%), Query Frame = 0


Query: 1   MGSWFSSNKFSKAELELALNEAKKIISSDPVVVFSKTYCGFCASVKELLTQLGANFKVIE 60
           MGSWFSSNKFSK ELE+ALNE KKIIS+DPVVVFSKTYCGFC+SVK+LLTQLGA +KVIE
Sbjct: 1   MGSWFSSNKFSKEELEVALNEVKKIISTDPVVVFSKTYCGFCSSVKKLLTQLGARYKVIE 60

Query: 61  LNQKSDGDAIQSALAEWTGQTTVPNVFIGGKHIGGCDAVTEKHNRGQLVPLLTDAGAFAK 120
           LNQ+S+GD IQSALAEWTGQTTVPNVFIGGKHIGGCDAVTEKH+RGQLVPLLT+AGA A 
Sbjct: 61  LNQESNGDKIQSALAEWTGQTTVPNVFIGGKHIGGCDAVTEKHHRGQLVPLLTEAGAIAG 120

Query: 121 NSAQL 126
           NSA L
Sbjct: 121 NSAPL 125

[Close]

BLAST of Lcy06g003930 vs. NCBI nr
Match: XP_022137238.1 (glutaredoxin-C1 [Momordica charantia])

HSP 1 Score: 224.9 bits (572), Expect = 3.8e-55
Identity = 109/125 (87.20%), Postives = 116/125 (92.80%), Query Frame = 0


Query: 1   MGSWFSSNKFSKAELELALNEAKKIISSDPVVVFSKTYCGFCASVKELLTQLGANFKVIE 60
           MGSWFSSNK SK ELE+ALNEAKKIISS PVVVFSKTYCGFC  VK+LLTQLGA++KVIE
Sbjct: 1   MGSWFSSNKKSKEELEMALNEAKKIISSHPVVVFSKTYCGFCTRVKQLLTQLGASYKVIE 60

Query: 61  LNQKSDGDAIQSALAEWTGQTTVPNVFIGGKHIGGCDAVTEKHNRGQLVPLLTDAGAFAK 120
           L+Q+SDGD IQSAL EWTGQ+TVPNVFIGGKHIGGCDAVTEKHNRGQLVPLLTDAGA A 
Sbjct: 61  LDQQSDGDTIQSALEEWTGQSTVPNVFIGGKHIGGCDAVTEKHNRGQLVPLLTDAGAIAN 120

Query: 121 NSAQL 126
           NSAQL
Sbjct: 121 NSAQL 125

[Close]

BLAST of Lcy06g003930 vs. NCBI nr
Match: XP_022954603.1 (glutaredoxin [Cucurbita moschata] >KAG7012254.1 Glutaredoxin-C1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 214.2 bits (544), Expect = 6.6e-52
Identity = 104/125 (83.20%), Postives = 112/125 (89.60%), Query Frame = 0


Query: 1   MGSWFSSNKFSKAELELALNEAKKIISSDPVVVFSKTYCGFCASVKELLTQLGANFKVIE 60
           MGSWFSSNKF K E   +LNEAK IISS+PVVVFSKTYCG+C+ VKELLTQLGA+ KVIE
Sbjct: 1   MGSWFSSNKFCKEEQNQSLNEAKNIISSNPVVVFSKTYCGYCSRVKELLTQLGASHKVIE 60

Query: 61  LNQKSDGDAIQSALAEWTGQTTVPNVFIGGKHIGGCDAVTEKHNRGQLVPLLTDAGAFAK 120
           L+QKSDGDAIQSALAEWTGQT+VPNVFIGGKHIGGCDAVT KH+ GQLVPLL DAGA A 
Sbjct: 61  LDQKSDGDAIQSALAEWTGQTSVPNVFIGGKHIGGCDAVTNKHSSGQLVPLLADAGAIAN 120

Query: 121 NSAQL 126
           NSAQL
Sbjct: 121 NSAQL 125

[Close]

BLAST of Lcy06g003930 vs. TAIR 10
Match: AT5G63030.1 (Thioredoxin superfamily protein )

HSP 1 Score: 182.6 bits (462), Expect = 2.0e-46
Identity = 86/125 (68.80%), Postives = 105/125 (84.00%), Query Frame = 0


Query: 1   MGSWFSSNKFSKAELELALNEAKKIISSDPVVVFSKTYCGFCASVKELLTQLGANFKVIE 60
           MGS FS N+ SK E+E+ +N+AK+I+S+ PVVVFSKTYCG+C  VK+LLTQLGA FKV+E
Sbjct: 1   MGSMFSGNRMSKEEMEVVVNKAKEIVSAYPVVVFSKTYCGYCQRVKQLLTQLGATFKVLE 60

Query: 61  LNQKSDGDAIQSALAEWTGQTTVPNVFIGGKHIGGCDAVTEKHNRGQLVPLLTDAGAFAK 120
           L++ SDG  IQSAL+EWTGQTTVPNVFI G HIGGCD V E + +G+LVPLLT+AGA A 
Sbjct: 61  LDEMSDGGEIQSALSEWTGQTTVPNVFIKGNHIGGCDRVMETNKQGKLVPLLTEAGAIAD 120

Query: 121 NSAQL 126
           NS+QL
Sbjct: 121 NSSQL 125

[Close]

BLAST of Lcy06g003930 vs. TAIR 10
Match: AT5G40370.1 (Glutaredoxin family protein )

HSP 1 Score: 151.4 bits (381), Expect = 4.9e-37
Identity = 70/107 (65.42%), Postives = 85/107 (79.44%), Query Frame = 0


Query: 17  LALNEAKKIISSDPVVVFSKTYCGFCASVKELLTQLGANFKVIELNQKSDGDAIQSALAE 76
           +A+ +AK+I++S+ VVVFSKTYC +C  VKELL QLGA FK +EL+ +SDG  IQS LAE
Sbjct: 1   MAMQKAKEIVNSESVVVFSKTYCPYCVRVKELLQQLGAKFKAVELDTESDGSQIQSGLAE 60

Query: 77  WTGQTTVPNVFIGGKHIGGCDAVTEKHNRGQLVPLLTDAGAFAKNSA 124
           WTGQ TVPNVFIGG HIGGCDA +  H  G+LVPLLT+AGA A  +A
Sbjct: 61  WTGQRTVPNVFIGGNHIGGCDATSNLHKDGKLVPLLTEAGAIAGKTA 107

[Close]

BLAST of Lcy06g003930 vs. TAIR 10
Match: AT5G40370.2 (Glutaredoxin family protein )

HSP 1 Score: 132.5 bits (332), Expect = 2.4e-31
Identity = 61/91 (67.03%), Postives = 70/91 (76.92%), Query Frame = 0


Query: 33  VFSKTYCGFCASVKELLTQLGANFKVIELNQKSDGDAIQSALAEWTGQTTVPNVFIGGKH 92
           + SKTYC +C  VKELL QLGA FK +EL+ +SDG  IQS LAEWTGQ TVPNVFIGG H
Sbjct: 42  ICSKTYCPYCVRVKELLQQLGAKFKAVELDTESDGSQIQSGLAEWTGQRTVPNVFIGGNH 101

Query: 93  IGGCDAVTEKHNRGQLVPLLTDAGAFAKNSA 124
           IGGCDA +  H  G+LVPLLT+AGA A  +A
Sbjct: 102 IGGCDATSNLHKDGKLVPLLTEAGAIAGKTA 132

[Close]

BLAST of Lcy06g003930 vs. TAIR 10
Match: AT2G20270.1 (Thioredoxin superfamily protein )

HSP 1 Score: 95.9 bits (237), Expect = 2.4e-20
Identity = 50/111 (45.05%), Postives = 70/111 (63.06%), Query Frame = 0


Query: 6   SSNKFSKAELELALNEAKKIISSDPVVVFSKTYCGFCASVKELLTQLGANFKVIELNQ-K 65
           SS+  S + LE      K  ++ +PVVV+SKT+C + + VK L   L     V+EL+Q  
Sbjct: 65  SSSSSSGSTLE---ETVKTTVAENPVVVYSKTWCSYSSQVKSLFKSLQVEPLVVELDQLG 124

Query: 66  SDGDAIQSALAEWTGQTTVPNVFIGGKHIGGCDAVTEKHNRGQLVPLLTDA 116
           S+G  +Q+ L + TGQ TVPNVFIGGKHIGGC    + HN+G+L  +L +A
Sbjct: 125 SEGSQLQNVLEKITGQYTVPNVFIGGKHIGGCSDTLQLHNKGELEAILAEA 172

[Close]

BLAST of Lcy06g003930 vs. TAIR 10
Match: AT5G20500.1 (Glutaredoxin family protein )

HSP 1 Score: 90.1 bits (222), Expect = 1.3e-18
Identity = 42/94 (44.68%), Postives = 60/94 (63.83%), Query Frame = 0


Query: 23  KKIISSDPVVVFSKTYCGFCASVKELLTQLGANFKVIELNQKSDGDAIQSALAEWTGQTT 82
           KK ISS  +V+FSK+YC +C   K +  +L     V+EL+++ DG +IQ+AL E  G+ T
Sbjct: 36  KKTISSHKIVIFSKSYCPYCKKAKSVFRELDQVPYVVELDEREDGWSIQTALGEIVGRRT 95

Query: 83  VPNVFIGGKHIGGCDAVTEKHNRGQLVPLLTDAG 117
           VP VFI GKH+GG D   + +  G+L  LL  +G
Sbjct: 96  VPQVFINGKHLGGSDDTVDAYESGELAKLLGVSG 129

The following BLAST results are available for this feature:

BLAST of Lcy06g003930 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8L8T2	2.8e-45	68.80	Glutaredoxin-C1 OS=Arabidopsis thaliana OX=3702 GN=GRXC1 PE=2 SV=2	[more]
P55143	2.8e-37	69.31	Glutaredoxin OS=Ricinus communis OX=3988 PE=3 SV=1	[more]
Q9ZR41	1.8e-36	66.04	Glutaredoxin OS=Solanum lycopersicum OX=4081 PE=3 SV=1	[more]
Q9FNE2	6.9e-36	65.42	Glutaredoxin-C2 OS=Arabidopsis thaliana OX=3702 GN=GRXC2 PE=3 SV=1	[more]
O81187	4.5e-35	66.34	Glutaredoxin OS=Vernicia fordii OX=73154 PE=3 SV=1	[more]

BLAST of Lcy06g003930 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
U3RGD2	3.3e-57	88.80	Glutaredoxin OS=Cucumis sativus OX=3659 GN=GRX2 PE=2 SV=1	[more]
A0A1S3AWQ0	8.2e-56	87.20	glutaredoxin OS=Cucumis melo OX=3656 GN=LOC103483635 PE=3 SV=1	[more]
A0A6J1C9R3	1.8e-55	87.20	glutaredoxin-C1 OS=Momordica charantia OX=3673 GN=LOC111008748 PE=3 SV=1	[more]
A0A6J1GRJ6	3.2e-52	83.20	glutaredoxin OS=Cucurbita moschata OX=3662 GN=LOC111456821 PE=3 SV=1	[more]
A0A5D3BJ77	4.2e-52	86.67	Glutaredoxin domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]

BLAST of Lcy06g003930 vs. NCBI nr


Match Name	E-value	Identity	Description
NP_001274139.1	6.8e-57	88.80	glutaredoxin [Cucumis sativus] >AGX01494.1 glutaredoxin [Cucumis sativus] >KGN64...	[more]
XP_038894148.1	1.5e-56	88.80	glutaredoxin [Benincasa hispida]	[more]
XP_008438572.1	1.7e-55	87.20	PREDICTED: glutaredoxin [Cucumis melo]	[more]
XP_022137238.1	3.8e-55	87.20	glutaredoxin-C1 [Momordica charantia]	[more]
XP_022954603.1	6.6e-52	83.20	glutaredoxin [Cucurbita moschata] >KAG7012254.1 Glutaredoxin-C1 [Cucurbita argyr...	[more]

BLAST of Lcy06g003930 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G63030.1	2.0e-46	68.80	Thioredoxin superfamily protein	[more]
AT5G40370.1	4.9e-37	65.42	Glutaredoxin family protein	[more]
AT5G40370.2	2.4e-31	67.03	Glutaredoxin family protein	[more]
AT2G20270.1	2.4e-20	45.05	Thioredoxin superfamily protein	[more]
AT5G20500.1	1.3e-18	44.68	Glutaredoxin family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR014025	Glutaredoxin subgroup	PRINTS	PR00160	GLUTAREDOXIN	coord: 90..103 score: 41.67 coord: 31..49 score: 46.71 coord: 76..89 score: 59.23
IPR011899	Glutaredoxin, eukaryotic/virial	TIGRFAM	TIGR02180	TIGR02180	coord: 31..111 e-value: 1.1E-28 score: 97.3
None	No IPR available	GENE3D	3.40.30.10	Glutaredoxin	coord: 11..125 e-value: 8.0E-42 score: 143.5
None	No IPR available	PANTHER	PTHR45694:SF14	GLUTAREDOXIN-C2	coord: 11..123
None	No IPR available	PANTHER	PTHR45694	GLUTAREDOXIN 2	coord: 11..123
None	No IPR available	PROSITE	PS51354	GLUTAREDOXIN_2	coord: 19..119 score: 25.747787
None	No IPR available	CDD	cd03419	GRX_GRXh_1_2_like	coord: 30..111 e-value: 6.12081E-45 score: 139.212
IPR002109	Glutaredoxin	PFAM	PF00462	Glutaredoxin	coord: 31..93 e-value: 1.7E-20 score: 73.0
IPR036249	Thioredoxin-like superfamily	SUPERFAMILY	52833	Thioredoxin-like	coord: 20..117

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy06g003930.1	Lcy06g003930.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0034599	cellular response to oxidative stress
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0015038	glutathione disulfide oxidoreductase activity
molecular_function	GO:0097573	glutathione oxidoreductase activity