Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AGAAGAACTTATTTCTGTTTTCGCAGTAAATCTGAGAGTTGAGGTTTTCTTTCGCTTTTCGTTTCGTTTTACTTCGCTTCTCATCATGGACGGTAATGGCGTCGATCCCTTCGATTCACTCACCCAACTCTGCATCCTCTCCGACTCCCAAGAGGATACTCTACGTCGCTGCTCTTTCGCCGGCAACCCCAAACCCGGCGATGGCTCTGGTTCTTTCGACTCCCAAATCTTTCACCTCCAGCCCACTGCTATTTTCACGGCTCCTTATCCCGAGACTTTGGAGCAGAGAGAACAAGTAACTCCTCGTGATGCCTACCAGGTTCCACCGGAACAGCCCGGCGGACAGCAGCCCATGGCTGTGGACGATCCTTCTCTTGGAGATGCGCCGGCGGTCGCTGGCTGTGCTGAGGTGGCCGTTGGAGGCGGATTTGTGCGCGATGTTGTCATGGGAGTGGATTTGGGAAATGATACTGACTTAGGGTTTCATTTGGAAGTTCAATCGACACAACAAACTGCTGAAATCGGAATTATCGGTGTTCGTAGAGGGAAGATTACTGAGTCTGAAGCTGGCGGAGAGGGTGCATCGGCATCGAAAATGTTGAAATCGTTGAATGAAGCTTTGGGTACAACCTCCTCTGTGCCAATCGTATTAGAAAAGTTACTAATCGATCTCGATTCGCTACAGTCCGGTGGAGAATCGAAACTCATGGATCACAATGACGAAATGGCTGAGGAATCGGTAACAGTCGCTGATGGACAGGTCTCCAATGGCGAAGAAACTCTCCGTAACAAGGGAACATTTGCAGAGAAGGAAGTGAGTGAGAAGAGAGTCGAAAATTCCCAACCCGAAGAGCCGAGCAATGTCGAAGAAACAACCAATCGCGATCAAGCAAGGCGCATTCTGCCATCAACAGTCAATGGATCAAAGGACAAAGCAGACGAGAACCCGAAGGAGAGTGCTGCATCCACTCTTATGGAAATTCTGAAGATTCTTGCACGAGAAGAAACTGAAGAGGACAAGAAGTTGGCAAACATGAGCATATTGGAAATCGTATCGCGTCGTGGGATGACATTTCCTCGGCCGTGCTGGTGGCCGGAGGGGCGGGATTTCAGCTTCAAGTAGATGAAGAAGAAAGCTGAAGATCGTAACTATTAGCAGATGGAAGAAGAATGAATCCCTTTTGGAAATGAACATTTCTTAGCTGAAGAAGAAATGTCTTTAGTTTTTTTGAGGTGCTTGATTATGTATGAACTTATAGCACCAATGTGTTCTTGAAATGCTTTGAATATGCTGGTTTTTGGGTATGGTTGAAGGAATTGTATGGAGTAGGAAAGACAAACATGGATAGGTTTGTATTTTGTGAAGACTTTCG
mRNA sequence
AGAAGAACTTATTTCTGTTTTCGCAGTAAATCTGAGAGTTGAGGTTTTCTTTCGCTTTTCGTTTCGTTTTACTTCGCTTCTCATCATGGACGGTAATGGCGTCGATCCCTTCGATTCACTCACCCAACTCTGCATCCTCTCCGACTCCCAAGAGGATACTCTACGTCGCTGCTCTTTCGCCGGCAACCCCAAACCCGGCGATGGCTCTGGTTCTTTCGACTCCCAAATCTTTCACCTCCAGCCCACTGCTATTTTCACGGCTCCTTATCCCGAGACTTTGGAGCAGAGAGAACAAGTAACTCCTCGTGATGCCTACCAGGTTCCACCGGAACAGCCCGGCGGACAGCAGCCCATGGCTGTGGACGATCCTTCTCTTGGAGATGCGCCGGCGGTCGCTGGCTGTGCTGAGGTGGCCGTTGGAGGCGGATTTGTGCGCGATGTTGTCATGGGAGTGGATTTGGGAAATGATACTGACTTAGGGTTTCATTTGGAAGTTCAATCGACACAACAAACTGCTGAAATCGGAATTATCGGTGTTCGTAGAGGGAAGATTACTGAGTCTGAAGCTGGCGGAGAGGGTGCATCGGCATCGAAAATGTTGAAATCGTTGAATGAAGCTTTGGGTACAACCTCCTCTGTGCCAATCGTATTAGAAAAGTTACTAATCGATCTCGATTCGCTACAGTCCGGTGGAGAATCGAAACTCATGGATCACAATGACGAAATGGCTGAGGAATCGGTAACAGTCGCTGATGGACAGGTCTCCAATGGCGAAGAAACTCTCCGTAACAAGGGAACATTTGCAGAGAAGGAAGTGAGTGAGAAGAGAGTCGAAAATTCCCAACCCGAAGAGCCGAGCAATGTCGAAGAAACAACCAATCGCGATCAAGCAAGGCGCATTCTGCCATCAACAGTCAATGGATCAAAGGACAAAGCAGACGAGAACCCGAAGGAGAGTGCTGCATCCACTCTTATGGAAATTCTGAAGATTCTTGCACGAGAAGAAACTGAAGAGGACAAGAAGTTGGCAAACATGAGCATATTGGAAATCGTATCGCGTCGTGGGATGACATTTCCTCGGCCGTGCTGGTGGCCGGAGGGGCGGGATTTCAGCTTCAAGTAGATGAAGAAGAAAGCTGAAGATCGTAACTATTAGCAGATGGAAGAAGAATGAATCCCTTTTGGAAATGAACATTTCTTAGCTGAAGAAGAAATGTCTTTAGTTTTTTTGAGGTGCTTGATTATGTATGAACTTATAGCACCAATGTGTTCTTGAAATGCTTTGAATATGCTGGTTTTTGGGTATGGTTGAAGGAATTGTATGGAGTAGGAAAGACAAACATGGATAGGTTTGTATTTTGTGAAGACTTTCG
Coding sequence (CDS)
ATGGACGGTAATGGCGTCGATCCCTTCGATTCACTCACCCAACTCTGCATCCTCTCCGACTCCCAAGAGGATACTCTACGTCGCTGCTCTTTCGCCGGCAACCCCAAACCCGGCGATGGCTCTGGTTCTTTCGACTCCCAAATCTTTCACCTCCAGCCCACTGCTATTTTCACGGCTCCTTATCCCGAGACTTTGGAGCAGAGAGAACAAGTAACTCCTCGTGATGCCTACCAGGTTCCACCGGAACAGCCCGGCGGACAGCAGCCCATGGCTGTGGACGATCCTTCTCTTGGAGATGCGCCGGCGGTCGCTGGCTGTGCTGAGGTGGCCGTTGGAGGCGGATTTGTGCGCGATGTTGTCATGGGAGTGGATTTGGGAAATGATACTGACTTAGGGTTTCATTTGGAAGTTCAATCGACACAACAAACTGCTGAAATCGGAATTATCGGTGTTCGTAGAGGGAAGATTACTGAGTCTGAAGCTGGCGGAGAGGGTGCATCGGCATCGAAAATGTTGAAATCGTTGAATGAAGCTTTGGGTACAACCTCCTCTGTGCCAATCGTATTAGAAAAGTTACTAATCGATCTCGATTCGCTACAGTCCGGTGGAGAATCGAAACTCATGGATCACAATGACGAAATGGCTGAGGAATCGGTAACAGTCGCTGATGGACAGGTCTCCAATGGCGAAGAAACTCTCCGTAACAAGGGAACATTTGCAGAGAAGGAAGTGAGTGAGAAGAGAGTCGAAAATTCCCAACCCGAAGAGCCGAGCAATGTCGAAGAAACAACCAATCGCGATCAAGCAAGGCGCATTCTGCCATCAACAGTCAATGGATCAAAGGACAAAGCAGACGAGAACCCGAAGGAGAGTGCTGCATCCACTCTTATGGAAATTCTGAAGATTCTTGCACGAGAAGAAACTGAAGAGGACAAGAAGTTGGCAAACATGAGCATATTGGAAATCGTATCGCGTCGTGGGATGACATTTCCTCGGCCGTGCTGGTGGCCGGAGGGGCGGGATTTCAGCTTCAAGTAG
Protein sequence
MDGNGVDPFDSLTQLCILSDSQEDTLRRCSFAGNPKPGDGSGSFDSQIFHLQPTAIFTAPYPETLEQREQVTPRDAYQVPPEQPGGQQPMAVDDPSLGDAPAVAGCAEVAVGGGFVRDVVMGVDLGNDTDLGFHLEVQSTQQTAEIGIIGVRRGKITESEAGGEGASASKMLKSLNEALGTTSSVPIVLEKLLIDLDSLQSGGESKLMDHNDEMAEESVTVADGQVSNGEETLRNKGTFAEKEVSEKRVENSQPEEPSNVEETTNRDQARRILPSTVNGSKDKADENPKESAASTLMEILKILAREETEEDKKLANMSILEIVSRRGMTFPRPCWWPEGRDFSFK
Homology
BLAST of Lcy06g001940 vs. ExPASy TrEMBL
Match:
A0A5D3BIQ1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G002010 PE=4 SV=1)
HSP 1 Score: 300.1 bits (767), Expect = 1.2e-77
Identity = 185/345 (53.62%), Postives = 231/345 (66.96%), Query Frame = 0
Query: 1 MDGNGVDPFDSLTQLCILSDSQEDTLRRCSFAGNPKPGDGSGSFDSQIFHLQPTAIFTAP 60
MDG+G DPFDSL +LC++S SQED LR SFAG PK D SG SQ PT + TA
Sbjct: 1 MDGHGYDPFDSLAKLCVISHSQEDILRHSSFAGAPKSLDASGFPASQFLQRHPTCVSTAS 60
Query: 61 YPETLEQREQVTPRDAYQVPPEQPGGQQPMAVDDPSLGDAPAVAGCAEVAVGGGFVRDVV 120
PE+LEQREQ+ DAY+ PPEQ GG++P+AVDDPS+ DA A AVGGG V +V
Sbjct: 61 PPESLEQREQLITPDAYRPPPEQSGGRRPVAVDDPSVQDAAA-------AVGGGCVSNVP 120
Query: 121 MGVDLGNDTDLGFHLEVQSTQQTAEIGIIGVRRGKITESEAGGEGASASKMLKSLNEALG 180
GVDLG + +LGF LEVQSTQQT EI IIGVRR K++ES GE SASK LK NEALG
Sbjct: 121 TGVDLGKNDELGF-LEVQSTQQTDEIEIIGVRRSKVSESGTDGEAESASKRLKLSNEALG 180
Query: 181 TTSSVPIVLEKLLIDLDSLQSGGESKLMDHNDEMAEESVTVADGQVSNGEETLRNKGTFA 240
SSVP+V L+SG ES L++ + + EES + DG+VSNGEET NK
Sbjct: 181 KDSSVPLV---------GLESGRESILIEKSVPVGEESGKIDDGKVSNGEETHCNKN--- 240
Query: 241 EKEVSEKRVENSQPEEPSNVEETTNRDQARRILPSTVNG--SKDKADENPKESAA----S 300
+++++EK+VENS PEEP + N D R L ST+NG SK+K D+ + S
Sbjct: 241 KEKLTEKKVENSHPEEPGEYDGVLNCDPWRETLTSTLNGLISKEKDDDASSSGESGRGNS 300
Query: 301 TLMEILKILAR-EETEEDKKLANMSILEIVSRRGMTFPRPCWWPE 339
+MEILKI+++ E ++ED+KLANM ++E+ RGMTFPRPCWWPE
Sbjct: 301 IIMEILKIVSQVERSDEDEKLANMDLVEVAMSRGMTFPRPCWWPE 325
BLAST of Lcy06g001940 vs. ExPASy TrEMBL
Match:
A0A0A0LT00 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G042410 PE=4 SV=1)
HSP 1 Score: 278.5 bits (711), Expect = 3.8e-71
Identity = 177/345 (51.30%), Postives = 220/345 (63.77%), Query Frame = 0
Query: 1 MDGNGVDPFDSLTQLCILSDSQEDTLRRCSFAGNPKPGDGSGSFDSQIFHLQPTAIFTAP 60
MDG+ DPFDSL +LC++S SQED LR CSFAG P D S SQ H PT + TA
Sbjct: 1 MDGHVYDPFDSLAKLCLISHSQEDILRHCSFAGAPNSLDASRFPPSQFLHPYPTPVSTAS 60
Query: 61 YPETLEQREQVTPRDAYQVPPEQPGGQQPMAVDDPSLGDAPAVAGCAEVAVGGGFVRDVV 120
PE+LEQREQ+ DA Q PPEQ GG++P+ VDDPS+ DA A AVGGG V +V
Sbjct: 61 PPESLEQREQLISPDACQPPPEQSGGRRPVVVDDPSVQDAAA-------AVGGGCVSNVP 120
Query: 121 MGVDLGNDTDLGFHLEVQSTQQTAEIGIIGVRRGKITESEAGGEGASASKMLKSLNEALG 180
GVDLG + +LGF LEVQST+QT I IIGVRR K++ES GE SASK LK NEALG
Sbjct: 121 TGVDLGKNDELGF-LEVQSTRQTDGIEIIGVRRSKVSESGTDGEAESASKRLKLSNEALG 180
Query: 181 TTSSVPIVLEKLLIDLDSLQSGGESKLMDHNDEMAEESVTVADGQVSNGEETLRNKGTFA 240
SSVP V L++ + + EES + DG+VSNGEET NK
Sbjct: 181 KDSSVPFV----------------GLLIEKSVPVGEESGKIDDGKVSNGEETHCNKN--- 240
Query: 241 EKEVSEKRVENSQPEEPSNVEETTNRDQARRILPSTVNG--SKDKADE----NPKESAAS 300
++ ++EK+VENSQPE P + NRD R L S +NG SK+K D+ S S
Sbjct: 241 KQNLTEKKVENSQPEVPGEYDGVMNRDAGRETLISILNGLISKEKNDDATSSGESGSGNS 300
Query: 301 TLMEILKILAR-EETEEDKKLANMSILEIVSRRGMTFPRPCWWPE 339
+MEILKIL++ E ++ED+KLA+M+++E+ RGMTFPRPCWWPE
Sbjct: 301 IIMEILKILSQVERSDEDEKLADMNLIEVAMSRGMTFPRPCWWPE 318
BLAST of Lcy06g001940 vs. ExPASy TrEMBL
Match:
A0A2N9G3N6 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS21927 PE=4 SV=1)
HSP 1 Score: 120.9 bits (302), Expect = 1.0e-23
Identity = 116/359 (32.31%), Postives = 162/359 (45.13%), Query Frame = 0
Query: 7 DPFDSLTQLCILSDSQEDTLRRCSFA------GNPKPGDGSGSFDSQIFHLQPTAIFTAP 66
DPF S+T+LC +S SQE+ LR CSFA GD S S + T I
Sbjct: 8 DPFASITELCHVSASQEERLRHCSFALESDGCSGHDDGDSSDPTQSMEVDVASTGIVMVS 67
Query: 67 YPETLEQREQVTPRDAYQVPPE------QPGGQQPMAVDDPSLGDAPAVAGCAEVAVGGG 126
PE+ E+++ P D +Q P E QQPMAVD P DA A+AGC
Sbjct: 68 PPESSEEKDDSNPHDVFQTPTEGSLLASSEEQQQPMAVDGPRHSDAEALAGCT------- 127
Query: 127 FVRDVVMGVDLGNDTDLGFHLEVQSTQQ------TAEIGIIGVRRGKITESEAGGEGASA 186
D VDLG D+DLGF EV+ Q+ E +G+ R + + E+ E S
Sbjct: 128 ---DGSEAVDLGKDSDLGFS-EVELAQRVYDEDSVCESEKLGLSRRESSLKESLAE--SP 187
Query: 187 SKMLKSLNEALGTTSSVPIVLEKLLIDLDSLQSGGESKLMDHNDEMAEESVTVADGQVSN 246
SK LK L+ L S P L D D + D E +E + V
Sbjct: 188 SKKLKILDPNL--ASEAPEPCTGALSDSDPEIHQNTEIIEDSEVEANDEEIKVC------ 247
Query: 247 GEETLRNKGTF----AEKEVSEKRVENSQPEEPSNVEETTNRDQARRILPSTVN----GS 306
GE + + K F E SE + + EE E N + R+LP +++
Sbjct: 248 GESSAKRKLAFPYGDTEIVQSESEEDWEETEEGEVNHEKANASKIYRVLPVSMHVPAENR 307
Query: 307 KDKADENPKESAAS-TLMEILKILAREETEEDKKLANMSILEIVSRRGMTFPRPCWWPE 339
++ D N + T++++LK L EED L ++SI ++ ++GMTFP+PCWWPE
Sbjct: 308 AERVDNNGGLNGKEVTILDVLKFLKDGCDEEDDSLKSVSIFDMCKQQGMTFPQPCWWPE 345
BLAST of Lcy06g001940 vs. ExPASy TrEMBL
Match:
A0A5A7TCP7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1017G00750 PE=4 SV=1)
HSP 1 Score: 118.2 bits (295), Expect = 6.6e-23
Identity = 119/345 (34.49%), Postives = 164/345 (47.54%), Query Frame = 0
Query: 24 DTLRRCSFAGNPKPGDGSGSFDSQIFHLQPTAIFTAPYPETLEQREQVTPRDAYQVPPEQ 83
+ RRC F GN S S DS+ ++ T IF P+++E+++ P ++Q PE+
Sbjct: 17 NVFRRCPFTGNIY--SDSDSSDSEAVPVESTGIFMLSLPDSMEEKDDSLPH-SFQTAPEE 76
Query: 84 --PGGQQPMAVDDPSLGDAPAVAGCAEVAVGGGFVRDVVMGVDLGNDTDLGFHLEVQSTQ 143
P G S G A V V +V D VDLG DTD+G + EVQST
Sbjct: 77 LAPTG---------SDGRRSLAADSTGVEVSFEYVDD-GKAVDLGRDTDVGLYSEVQSTT 136
Query: 144 QTAEIG----IIGVRRGKITESEAGG---------EGASASKMLKSLNEALGTTSSVPIV 203
+T E G +IG R +E++ G G S+SK L+ EALG +S
Sbjct: 137 ETVEKGKTIEVIGARGSHSSETKKSGILFEESVVSLGESSSKKLRLSEEALGLSSCGRTF 196
Query: 204 LEKLLIDLDSLQSGGESKLMDHNDEMAEESVTVA---DGQVS---NGEETLRNKGTFAEK 263
L+K +DL + SGG HND+ + DG+VS N E K AEK
Sbjct: 197 LDKFPVDLTN--SGG-----SHNDDDCSGKYKLKGTDDGKVSNDENDENQCNYKEKSAEK 256
Query: 264 EVSEKRVENSQPEEPSNVEETTNRDQA-RRILPSTVNGSKDKADE-----NPKESAASTL 323
EV E P++ EE N Q+ R+LP ++ G K A E + + TL
Sbjct: 257 EVKESVKNIQSPQQNKFQEEIANAHQSCCRVLPPSMTGVKKNAAEERFNTSEDQPIEVTL 316
Query: 324 MEILKILAREETE----EDKKLANMSILEIVSRRGMTFPRPCWWP 338
++IL IL E+ +D+ L+ +SILEI RGMTFPRP WWP
Sbjct: 317 LKILMILKGEQVNVIEFDDETLSKLSILEIAQLRGMTFPRPEWWP 341
BLAST of Lcy06g001940 vs. ExPASy TrEMBL
Match:
A0A0A0L1F4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G017190 PE=4 SV=1)
HSP 1 Score: 108.2 bits (269), Expect = 6.8e-20
Identity = 119/354 (33.62%), Postives = 165/354 (46.61%), Query Frame = 0
Query: 17 ILSDSQEDTLRRCSFAGNPKPGDGSGSFDSQIFHLQPTAIFTAPYPETLEQREQVTPRDA 76
I++ S + LRRC F GN S S DS+ F ++ T IF P+++E+++ P +
Sbjct: 10 IVTGSPVNVLRRCPFTGNVY--SDSDSSDSEAFPVESTGIFMLSLPDSMEEKDDSLPH-S 69
Query: 77 YQVPPEQ--PGGQQPMAVDDPSLGDAPAVAGCAEVAVGGGFVRDVVMGVDLGNDTDLGFH 136
+Q PE+ P G A V V +V D VDLG DTD+G +
Sbjct: 70 FQTAPEELAPNGSDER---------RSLAADSTGVEVSFEYVDD-GKAVDLGRDTDVGLY 129
Query: 137 LEVQSTQQTAE----IGIIGV---------RRGKITESEAGGEGASASKMLKSLNEALGT 196
EVQST +T E IG+IGV + G + E G S+SK L+ EALG
Sbjct: 130 SEVQSTTETVEKGKSIGVIGVCGSHSSEPKKSGILFEESVVSLGESSSKKLRLSVEALG- 189
Query: 197 TSSVPIVLEKLLIDLDSLQSGGESKLMDHNDEMAEESVTVA---DGQVS---NGEETLRN 256
L SGG HND+ + DG++S N E
Sbjct: 190 -----------------LSSGG-----SHNDDDCSGKYKLKGTDDGKISNDENDENQCNY 249
Query: 257 KGTFAEKEVSE--KRVENSQPEEPSNVEETTNRDQA-RRILPSTVNGSKDKADENPKESA 316
K AE EV E K +E+ Q + EE N Q+ R+LP +++G K+ A E ++
Sbjct: 250 KEKSAENEVKESVKNIESHQQNKFQ--EEIANAHQSCCRVLPPSISGVKNNAAEERSNTS 309
Query: 317 AS-----TLMEILKIL--AREETEE--DKKLANMSILEIVSRRGMTFPRPCWWP 338
TL++IL IL ++ T E D+ L+ +SILEI RGMTFPRP WWP
Sbjct: 310 EDQPIEVTLLKILMILKGGQDNTIEFDDETLSKLSILEIAQLRGMTFPRPEWWP 325
BLAST of Lcy06g001940 vs. NCBI nr
Match:
KAG7019938.1 (hypothetical protein SDJN02_18905 [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 406.8 bits (1044), Expect = 1.9e-109
Identity = 231/353 (65.44%), Postives = 266/353 (75.35%), Query Frame = 0
Query: 1 MDGNGVDPFDSLTQLCILSDSQEDTLRRCSFAGNPKPGDGSGSFDSQIFH-LQPTAIFTA 60
MDGNG DPFDSLT+ C+LSDSQED LRRCSFAGNP+ DGS S SQI H LQPT +F A
Sbjct: 1 MDGNGDDPFDSLTKFCVLSDSQEDILRRCSFAGNPESVDGSCSTYSQIHHLLQPTGVFMA 60
Query: 61 PYPETLEQREQVTPRDAYQVPPEQPGGQQPMAVDDPSLGDAPAVAGCAEVAVGGGFVRDV 120
PE+LEQREQ+T +AYQ PPEQ GGQ+PMA DDPSL DA VAG AE V GG VRDV
Sbjct: 61 SLPESLEQREQITSHNAYQAPPEQSGGQRPMAEDDPSLQDAAVVAGGAEATVEGGCVRDV 120
Query: 121 VMGVDLGNDTDLGFHLEVQSTQQTAEIGIIGVRRGKITESEAGGEGASASKMLKSLNEAL 180
VDLG + DLGF LEVQSTQ T EI ++GVRR K++ES+AGGE SASK L NEAL
Sbjct: 121 ATAVDLGKNDDLGFRLEVQSTQHTDEIEVVGVRRRKVSESDAGGERESASKRLNFSNEAL 180
Query: 181 GTTSSVPIVLEKLLIDLDSLQSGGESKLMDHNDEMAEESVTVA-------DGQVSNGEET 240
GT SSVPIV+E L +D L+SGG SKL+DHN EMAEES TVA DG+VSNGEET
Sbjct: 181 GTESSVPIVVENLPVD---LESGGGSKLVDHNVEMAEESATVAVESGKVDDGKVSNGEET 240
Query: 241 LRNKGTFAEKEVSEKRVENSQPEEPSNVEETTNRDQARRILPSTVNGSKDKADENPKESA 300
NK +++ +EKRVENSQPEEP N E T RD+ R +LPST+NGSK+ E +
Sbjct: 241 HCNKN---KEKFAEKRVENSQPEEPCNYEGTMYRDRWRCVLPSTMNGSKN--SEETDATP 300
Query: 301 ASTLMEILKILAREETEEDKKLANMSILEIVSRRGMTFPRPCWWPEGRDFSFK 346
S +MEILK+LA EE EEDK+ A+MSILE+VS RGMTFPRPCWWPEG++FSFK
Sbjct: 301 PSIIMEILKLLAEEEGEEDKEFASMSILEVVSHRGMTFPRPCWWPEGQEFSFK 345
BLAST of Lcy06g001940 vs. NCBI nr
Match:
KAG6584353.1 (hypothetical protein SDJN03_20285, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 347.1 bits (889), Expect = 1.8e-91
Identity = 207/323 (64.09%), Postives = 238/323 (73.68%), Query Frame = 0
Query: 1 MDGNGVDPFDSLTQLCILSDSQEDTLRRCSFAGNPKPGDGSGSFDSQIFH-LQPTAIFTA 60
MDGNG DPFDSLT+ C+LSDSQED LRRCSFAGNP+ DGS S SQI H LQPT +F A
Sbjct: 1 MDGNGDDPFDSLTKFCVLSDSQEDILRRCSFAGNPESVDGSCSTYSQIHHLLQPTGVFMA 60
Query: 61 PYPETLEQREQVTPRDAYQVPPEQPGGQQPMAVDDPSLGDAPAVAGCAEVAVGGGFVRDV 120
PE+LEQREQ+T +AYQ PPEQ GGQ+PMA DDPSL DA VAG AE V GG VRDV
Sbjct: 61 SLPESLEQREQITFHNAYQAPPEQSGGQRPMAEDDPSLQDAAVVAGGAEATVEGGCVRDV 120
Query: 121 VMGVDLGNDTDLGFHLEVQSTQQTAEIGIIGVRRGKITESEAGGEGASASKMLKSLNEAL 180
VDLG + DLGF LEVQSTQQT EI ++GVRR K++ES+AGGE SASK L NEAL
Sbjct: 121 ATAVDLGKNDDLGFRLEVQSTQQTDEIEVVGVRRRKVSESDAGGERESASKRLNFSNEAL 180
Query: 181 GTTSSVPIVLEKLLIDLDSLQSGGESKLMDHNDEMAEESVTVA-------DGQVSNGEET 240
GT SSVPIV+E L +D L+SGG SKL+DHN EMAEES TVA DG+VSNGEET
Sbjct: 181 GTESSVPIVVENLPVD---LESGGGSKLVDHNVEMAEESATVAVESGKVDDGKVSNGEET 240
Query: 241 LRNKGTFAEKEVSEKRVENSQPEEPSNVEETTNRDQARRILPSTVNGSKDKADENPKESA 300
NK +++ +EKRVENSQPEEP N E T RD+ R +LPST+NGSK+ E +
Sbjct: 241 HCNKN---KEKFAEKRVENSQPEEPCNYEGTMYRDRWRCVLPSTMNGSKN--SEETDATP 300
Query: 301 ASTLMEILKILAREETEEDKKLA 316
S +MEILK+LA EE EEDK+ A
Sbjct: 301 PSIIMEILKLLAEEEGEEDKEFA 315
BLAST of Lcy06g001940 vs. NCBI nr
Match:
TYJ98997.1 (hypothetical protein E5676_scaffold248G002010 [Cucumis melo var. makuwa])
HSP 1 Score: 300.1 bits (767), Expect = 2.5e-77
Identity = 185/345 (53.62%), Postives = 231/345 (66.96%), Query Frame = 0
Query: 1 MDGNGVDPFDSLTQLCILSDSQEDTLRRCSFAGNPKPGDGSGSFDSQIFHLQPTAIFTAP 60
MDG+G DPFDSL +LC++S SQED LR SFAG PK D SG SQ PT + TA
Sbjct: 1 MDGHGYDPFDSLAKLCVISHSQEDILRHSSFAGAPKSLDASGFPASQFLQRHPTCVSTAS 60
Query: 61 YPETLEQREQVTPRDAYQVPPEQPGGQQPMAVDDPSLGDAPAVAGCAEVAVGGGFVRDVV 120
PE+LEQREQ+ DAY+ PPEQ GG++P+AVDDPS+ DA A AVGGG V +V
Sbjct: 61 PPESLEQREQLITPDAYRPPPEQSGGRRPVAVDDPSVQDAAA-------AVGGGCVSNVP 120
Query: 121 MGVDLGNDTDLGFHLEVQSTQQTAEIGIIGVRRGKITESEAGGEGASASKMLKSLNEALG 180
GVDLG + +LGF LEVQSTQQT EI IIGVRR K++ES GE SASK LK NEALG
Sbjct: 121 TGVDLGKNDELGF-LEVQSTQQTDEIEIIGVRRSKVSESGTDGEAESASKRLKLSNEALG 180
Query: 181 TTSSVPIVLEKLLIDLDSLQSGGESKLMDHNDEMAEESVTVADGQVSNGEETLRNKGTFA 240
SSVP+V L+SG ES L++ + + EES + DG+VSNGEET NK
Sbjct: 181 KDSSVPLV---------GLESGRESILIEKSVPVGEESGKIDDGKVSNGEETHCNKN--- 240
Query: 241 EKEVSEKRVENSQPEEPSNVEETTNRDQARRILPSTVNG--SKDKADENPKESAA----S 300
+++++EK+VENS PEEP + N D R L ST+NG SK+K D+ + S
Sbjct: 241 KEKLTEKKVENSHPEEPGEYDGVLNCDPWRETLTSTLNGLISKEKDDDASSSGESGRGNS 300
Query: 301 TLMEILKILAR-EETEEDKKLANMSILEIVSRRGMTFPRPCWWPE 339
+MEILKI+++ E ++ED+KLANM ++E+ RGMTFPRPCWWPE
Sbjct: 301 IIMEILKIVSQVERSDEDEKLANMDLVEVAMSRGMTFPRPCWWPE 325
BLAST of Lcy06g001940 vs. NCBI nr
Match:
KAE8652542.1 (hypothetical protein Csa_013076 [Cucumis sativus])
HSP 1 Score: 278.5 bits (711), Expect = 7.9e-71
Identity = 177/345 (51.30%), Postives = 220/345 (63.77%), Query Frame = 0
Query: 1 MDGNGVDPFDSLTQLCILSDSQEDTLRRCSFAGNPKPGDGSGSFDSQIFHLQPTAIFTAP 60
MDG+ DPFDSL +LC++S SQED LR CSFAG P D S SQ H PT + TA
Sbjct: 260 MDGHVYDPFDSLAKLCLISHSQEDILRHCSFAGAPNSLDASRFPPSQFLHPYPTPVSTAS 319
Query: 61 YPETLEQREQVTPRDAYQVPPEQPGGQQPMAVDDPSLGDAPAVAGCAEVAVGGGFVRDVV 120
PE+LEQREQ+ DA Q PPEQ GG++P+ VDDPS+ DA A AVGGG V +V
Sbjct: 320 PPESLEQREQLISPDACQPPPEQSGGRRPVVVDDPSVQDAAA-------AVGGGCVSNVP 379
Query: 121 MGVDLGNDTDLGFHLEVQSTQQTAEIGIIGVRRGKITESEAGGEGASASKMLKSLNEALG 180
GVDLG + +LGF LEVQST+QT I IIGVRR K++ES GE SASK LK NEALG
Sbjct: 380 TGVDLGKNDELGF-LEVQSTRQTDGIEIIGVRRSKVSESGTDGEAESASKRLKLSNEALG 439
Query: 181 TTSSVPIVLEKLLIDLDSLQSGGESKLMDHNDEMAEESVTVADGQVSNGEETLRNKGTFA 240
SSVP V L++ + + EES + DG+VSNGEET NK
Sbjct: 440 KDSSVPFV----------------GLLIEKSVPVGEESGKIDDGKVSNGEETHCNKN--- 499
Query: 241 EKEVSEKRVENSQPEEPSNVEETTNRDQARRILPSTVNG--SKDKADE----NPKESAAS 300
++ ++EK+VENSQPE P + NRD R L S +NG SK+K D+ S S
Sbjct: 500 KQNLTEKKVENSQPEVPGEYDGVMNRDAGRETLISILNGLISKEKNDDATSSGESGSGNS 559
Query: 301 TLMEILKILAR-EETEEDKKLANMSILEIVSRRGMTFPRPCWWPE 339
+MEILKIL++ E ++ED+KLA+M+++E+ RGMTFPRPCWWPE
Sbjct: 560 IIMEILKILSQVERSDEDEKLADMNLIEVAMSRGMTFPRPCWWPE 577
BLAST of Lcy06g001940 vs. NCBI nr
Match:
KAG6577658.1 (hypothetical protein SDJN03_25232, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 147.5 bits (371), Expect = 2.1e-31
Identity = 133/358 (37.15%), Postives = 187/358 (52.23%), Query Frame = 0
Query: 17 ILSDSQEDTLRRCSFAGNPKPGDG---SGSFDSQIFHLQPTAIFTAPYPETLEQREQVTP 76
++ S + RRC F G PK GD S S DS FH++ T IF P++LE+ P
Sbjct: 10 VVFGSPGNVFRRCPFTGKPKSGDSDSDSDSSDSGAFHVESTGIFMVSLPDSLEENADSLP 69
Query: 77 RDAYQVPPEQPGGQQPMAVDDPSLGDAPAVAGCAEVAVGGGFVRDVVMGVDLGNDTDLGF 136
+Y+ PE+ V S G A V +V D +DLG DTD+G
Sbjct: 70 H-SYETAPEE-------LVPTGSDGRRSVAADAIGAEVSAEYVDD-GKAIDLGRDTDVGL 129
Query: 137 HLEVQSTQQTAE----IGIIGVRRGKITESEAG---------GEGASASKMLKSLNEALG 196
+ EVQST +T E I +I R +E++ G S+SK L+ EALG
Sbjct: 130 YSEVQSTAETVEKDKSIEVIDDCRSHSSEAKKRRIPFDESDVSLGVSSSKKLRLSEEALG 189
Query: 197 TTSSVPIVLEKLLIDLDSLQSGGESKL--MDHNDEMAEESVT--VADGQVSNGE--ETLR 256
+S I ++K +DS SGG SK+ +D+ND+ + + DG+VSNG+ E
Sbjct: 190 LSSCARIFVDK--FPVDSTNSGGGSKVSSVDNNDDSGGKCKLNGMNDGKVSNGKNGENGE 249
Query: 257 NKGTF----AEKEVSEKRVENSQPEEPSNV-EETTNRDQ-ARRILPSTVNGSK-----DK 316
N F EKEV E V+NSQ ++ SN+ EE N Q + R+LP +++G K ++
Sbjct: 250 NHCIFKEESTEKEVKES-VKNSQSDKQSNLQEEIANAHQSSSRVLPPSLSGVKRDASGER 309
Query: 317 ADENPKESAASTLMEILKILAREETEE----DKKLANMSILEIVSRRGMTFPRPCWWP 338
++ + TL+EILKILA E+ E D+ L+N+SIL+IV RRGMTFPRP WWP
Sbjct: 310 SNTSEDHPMEVTLLEILKILAGEQDRENEFNDETLSNLSILDIVQRRGMTFPRPEWWP 355
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A5D3BIQ1 | 1.2e-77 | 53.62 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
A0A0A0LT00 | 3.8e-71 | 51.30 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G042410 PE=4 SV=1 | [more] |
A0A2N9G3N6 | 1.0e-23 | 32.31 | Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS21927 PE=4 SV=1 | [more] |
A0A5A7TCP7 | 6.6e-23 | 34.49 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
A0A0A0L1F4 | 6.8e-20 | 33.62 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G017190 PE=4 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
KAG7019938.1 | 1.9e-109 | 65.44 | hypothetical protein SDJN02_18905 [Cucurbita argyrosperma subsp. argyrosperma] | [more] |
KAG6584353.1 | 1.8e-91 | 64.09 | hypothetical protein SDJN03_20285, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
TYJ98997.1 | 2.5e-77 | 53.62 | hypothetical protein E5676_scaffold248G002010 [Cucumis melo var. makuwa] | [more] |
KAE8652542.1 | 7.9e-71 | 51.30 | hypothetical protein Csa_013076 [Cucumis sativus] | [more] |
KAG6577658.1 | 2.1e-31 | 37.15 | hypothetical protein SDJN03_25232, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
Match Name | E-value | Identity | Description | |