Lcy06g001810 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy06g001810
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	heavy metal-associated isoprenylated plant protein 7-like
Location	Chr06: 1716571 .. 1717360 (-)
RNA-Seq Expression	Lcy06g001810
Synteny	Lcy06g001810

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAGTTTTGCTGCATGGTTTTGAGGATTCATATGGACTGCAATGGATGTTACAGGAAAGTAAGACGAGCCCTTCTTAGTATAAAAGGTGAAATCTCTATCTCTCTTTCTCTCTCGAGAAATTATTTGAGACACAAACAATATAACTAGCTATTTTATACCTCGAGGTAAGAGAGTGAAAACTATGTTCTGAGTCTTAGTTAAGAGTATGGAAGAGGACAACCATATTGTAGCGGTCAGATTTACCTTTTCTCTCTCTCTCTTTCCTTTTGTTCTGAACTAGACTCTCGATTGATTTTACTCGATAACTAATGAAATGATAGATAGTCCTTGTCATCTTGATAGAGGTGGAGACCTATCTATACAATTAATACTTAGAGTTTGAAAGGGGCAGCCATACTGTGGCGGCCAGATTAAATAACTTCTCTGTTCTTTCGTTCTAAATTAGACTCTTCAATTGATTCTACTTGGTAACTTAATAACATGTTAGTCCTTGTCATCTTGATAGAGTTGGAGGAACATTTGATAGAGCAAAAGCAGTGCAGGGTAAGCGTTTGTGGAAAGTTCAGCCCCCAAGATATAGCAATCAAAATAAGGAAGAAGACCAACCGCAGAGTAGAGATATTGGAGATTCAAGAGTGTGATACCTTCACTGAAAACAACGATATCCAAGGACCCTTGATCATCAATGCCTGGAAATGCCAATCCAACTATGATCAAGCAGAAACTTGTTGTAAGCATGAAGGTGACACAGAAGAAAAGGAAGAATTAGCTTCTTCTATAGCATAA

mRNA sequence

ATGGCAGTTTTGCTGCATGGTTTTGAGGATTCATATGGACTGCAATGGATGTTACAGGAAAAGTTGGAGGAACATTTGATAGAGCAAAAGCAGTGCAGGGTAAGCGTTTGTGGAAAGTTCAGCCCCCAAGATATAGCAATCAAAATAAGGAAGAAGACCAACCGCAGAGTAGAGATATTGGAGATTCAAGAGTGTGATACCTTCACTGAAAACAACGATATCCAAGGACCCTTGATCATCAATGCCTGGAAATGCCAATCCAACTATGATCAAGCAGAAACTTGTTGTAAGCATGAAGGTGACACAGAAGAAAAGGAAGAATTAGCTTCTTCTATAGCATAA

Coding sequence (CDS)

ATGGCAGTTTTGCTGCATGGTTTTGAGGATTCATATGGACTGCAATGGATGTTACAGGAAAAGTTGGAGGAACATTTGATAGAGCAAAAGCAGTGCAGGGTAAGCGTTTGTGGAAAGTTCAGCCCCCAAGATATAGCAATCAAAATAAGGAAGAAGACCAACCGCAGAGTAGAGATATTGGAGATTCAAGAGTGTGATACCTTCACTGAAAACAACGATATCCAAGGACCCTTGATCATCAATGCCTGGAAATGCCAATCCAACTATGATCAAGCAGAAACTTGTTGTAAGCATGAAGGTGACACAGAAGAAAAGGAAGAATTAGCTTCTTCTATAGCATAA

Protein sequence

MAVLLHGFEDSYGLQWMLQEKLEEHLIEQKQCRVSVCGKFSPQDIAIKIRKKTNRRVEILEIQECDTFTENNDIQGPLIINAWKCQSNYDQAETCCKHEGDTEEKEELASSIA

Homology

[Close]

BLAST of Lcy06g001810 vs. ExPASy TrEMBL
Match: A0A1S3C5D5 (uncharacterized protein LOC103497018 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103497018 PE=4 SV=1)

HSP 1 Score: 184.9 bits (468), Expect = 1.9e-43
Identity = 89/110 (80.91%), Postives = 97/110 (88.18%), Query Frame = 0


Query: 3   VLLHGFEDSYGLQWMLQEKLEEHLIEQKQCRVSVCGKFSPQDIAIKIRKKTNRRVEILEI 62
           V LHGFE+SYGLQWMLQE  + +    +  RVSVCGKFSPQDIAIKIRKKTNRRVEILE+
Sbjct: 22  VFLHGFENSYGLQWMLQESKKSY---SQYKRVSVCGKFSPQDIAIKIRKKTNRRVEILEV 81

Query: 63  QECDTFTENNDIQGPLIINAWKCQSNYDQAETCCKHEGDTEEKEELASSI 113
           QECDTF ENNDIQGPLIINAWKCQSNYDQ ETCC HEGDT+E++ELASSI
Sbjct: 82  QECDTFNENNDIQGPLIINAWKCQSNYDQVETCCTHEGDTKEQQELASSI 128

[Close]

BLAST of Lcy06g001810 vs. ExPASy TrEMBL
Match: A0A6J1KGG9 (heavy metal-associated isoprenylated plant protein 7-like OS=Cucurbita maxima OX=3661 GN=LOC111495042 PE=4 SV=1)

HSP 1 Score: 181.0 bits (458), Expect = 2.7e-42
Identity = 86/93 (92.47%), Postives = 90/93 (96.77%), Query Frame = 0


Query: 20  EKLEEHLIEQKQCRVSVCGKFSPQDIAIKIRKKTNRRVEILEIQECDTFTENNDIQGPLI 79
           ++LE+HLIEQKQCRVSVCGKFSPQDIAIKIRKKTNRRVEILEIQECDTFTENNDIQGP I
Sbjct: 31  KELEDHLIEQKQCRVSVCGKFSPQDIAIKIRKKTNRRVEILEIQECDTFTENNDIQGPFI 90

Query: 80  INAWKCQSNYDQAETCCKHEGDTEEKEELASSI 113
           INAWKCQSNYDQAE CCKHEG+ EEKEELASSI
Sbjct: 91  INAWKCQSNYDQAEICCKHEGNKEEKEELASSI 123

[Close]

BLAST of Lcy06g001810 vs. ExPASy TrEMBL
Match: A0A6J1E8F0 (heavy metal-associated isoprenylated plant protein 7-like OS=Cucurbita moschata OX=3662 GN=LOC111431583 PE=4 SV=1)

HSP 1 Score: 181.0 bits (458), Expect = 2.7e-42
Identity = 86/93 (92.47%), Postives = 90/93 (96.77%), Query Frame = 0


Query: 20  EKLEEHLIEQKQCRVSVCGKFSPQDIAIKIRKKTNRRVEILEIQECDTFTENNDIQGPLI 79
           ++LE+HLIEQKQCRVSVCGKFSPQDIAIKIRKKTNRRVEILEIQECDTFTENNDIQGP I
Sbjct: 31  KELEDHLIEQKQCRVSVCGKFSPQDIAIKIRKKTNRRVEILEIQECDTFTENNDIQGPFI 90

Query: 80  INAWKCQSNYDQAETCCKHEGDTEEKEELASSI 113
           INAWKCQSNYDQAE CCKHEG+ EEKEELASSI
Sbjct: 91  INAWKCQSNYDQAEICCKHEGNKEEKEELASSI 123

[Close]

BLAST of Lcy06g001810 vs. ExPASy TrEMBL
Match: A0A0A0LSZ0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G042260 PE=4 SV=1)

HSP 1 Score: 175.6 bits (444), Expect = 1.1e-40
Identity = 83/93 (89.25%), Postives = 88/93 (94.62%), Query Frame = 0


Query: 20  EKLEEHLIEQKQCRVSVCGKFSPQDIAIKIRKKTNRRVEILEIQECDTFTENNDIQGPLI 79
           ++LE HLIEQKQCRVSVCGKFSPQDIAIKIRKKTNRRVEILEIQECDTF ENN IQGPLI
Sbjct: 31  KELETHLIEQKQCRVSVCGKFSPQDIAIKIRKKTNRRVEILEIQECDTFNENNGIQGPLI 90

Query: 80  INAWKCQSNYDQAETCCKHEGDTEEKEELASSI 113
           INAWKCQSNYDQ ETCCKHEGDT+E+E+LAS I
Sbjct: 91  INAWKCQSNYDQVETCCKHEGDTKEQEDLASPI 123

[Close]

BLAST of Lcy06g001810 vs. ExPASy TrEMBL
Match: A0A6J1C7L3 (heavy metal-associated isoprenylated plant protein 28-like isoform X4 OS=Momordica charantia OX=3673 GN=LOC111008982 PE=4 SV=1)

HSP 1 Score: 175.6 bits (444), Expect = 1.1e-40
Identity = 85/93 (91.40%), Postives = 89/93 (95.70%), Query Frame = 0


Query: 20  EKLEEHLIEQKQCRVSVCGKFSPQDIAIKIRKKTNRRVEILEIQECDTFTENNDIQGPLI 79
           ++LE HLIEQKQCRVSVCGKFSPQD+AIKIRKKTNRRVEILEIQECDTFTENNDIQGPLI
Sbjct: 31  KELETHLIEQKQCRVSVCGKFSPQDVAIKIRKKTNRRVEILEIQECDTFTENNDIQGPLI 90

Query: 80  INAWKCQSNYDQAETCCKHEGDTEEKEELASSI 113
           IN WKC+SNYDQAETCC HEGDT EKEELASSI
Sbjct: 91  INPWKCRSNYDQAETCCMHEGDT-EKEELASSI 122

[Close]

BLAST of Lcy06g001810 vs. NCBI nr
Match: XP_008457333.1 (PREDICTED: uncharacterized protein LOC103497018 isoform X1 [Cucumis melo])

HSP 1 Score: 184.9 bits (468), Expect = 3.9e-43
Identity = 89/110 (80.91%), Postives = 97/110 (88.18%), Query Frame = 0


Query: 3   VLLHGFEDSYGLQWMLQEKLEEHLIEQKQCRVSVCGKFSPQDIAIKIRKKTNRRVEILEI 62
           V LHGFE+SYGLQWMLQE  + +    +  RVSVCGKFSPQDIAIKIRKKTNRRVEILE+
Sbjct: 22  VFLHGFENSYGLQWMLQESKKSY---SQYKRVSVCGKFSPQDIAIKIRKKTNRRVEILEV 81

Query: 63  QECDTFTENNDIQGPLIINAWKCQSNYDQAETCCKHEGDTEEKEELASSI 113
           QECDTF ENNDIQGPLIINAWKCQSNYDQ ETCC HEGDT+E++ELASSI
Sbjct: 82  QECDTFNENNDIQGPLIINAWKCQSNYDQVETCCTHEGDTKEQQELASSI 128

[Close]

BLAST of Lcy06g001810 vs. NCBI nr
Match: XP_038895027.1 (heavy metal-associated isoprenylated plant protein 7-like [Benincasa hispida])

HSP 1 Score: 183.3 bits (464), Expect = 1.1e-42
Identity = 87/93 (93.55%), Postives = 90/93 (96.77%), Query Frame = 0


Query: 20  EKLEEHLIEQKQCRVSVCGKFSPQDIAIKIRKKTNRRVEILEIQECDTFTENNDIQGPLI 79
           ++LE HLIEQKQCRVSVCGKFSPQDIAIKIRKKTNRRVEILEIQECDTFTENNDIQGPLI
Sbjct: 31  KELETHLIEQKQCRVSVCGKFSPQDIAIKIRKKTNRRVEILEIQECDTFTENNDIQGPLI 90

Query: 80  INAWKCQSNYDQAETCCKHEGDTEEKEELASSI 113
           INAWKCQSNYDQ ETCCKHEGDTEEKEEL +SI
Sbjct: 91  INAWKCQSNYDQVETCCKHEGDTEEKEELPNSI 123

[Close]

BLAST of Lcy06g001810 vs. NCBI nr
Match: KAG6584365.1 (Heavy metal-associated isoprenylated plant protein 26, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 181.0 bits (458), Expect = 5.6e-42
Identity = 86/93 (92.47%), Postives = 90/93 (96.77%), Query Frame = 0


Query: 20  EKLEEHLIEQKQCRVSVCGKFSPQDIAIKIRKKTNRRVEILEIQECDTFTENNDIQGPLI 79
           ++LE+HLIEQKQCRVSVCGKFSPQDIAIKIRKKTNRRVEILEIQECDTFTENNDIQGP I
Sbjct: 50  KELEDHLIEQKQCRVSVCGKFSPQDIAIKIRKKTNRRVEILEIQECDTFTENNDIQGPFI 109

Query: 80  INAWKCQSNYDQAETCCKHEGDTEEKEELASSI 113
           INAWKCQSNYDQAE CCKHEG+ EEKEELASSI
Sbjct: 110 INAWKCQSNYDQAEICCKHEGNKEEKEELASSI 142

[Close]

BLAST of Lcy06g001810 vs. NCBI nr
Match: KAG7019950.1 (Heavy metal-associated isoprenylated plant protein 26, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 181.0 bits (458), Expect = 5.6e-42
Identity = 86/93 (92.47%), Postives = 90/93 (96.77%), Query Frame = 0


Query: 20  EKLEEHLIEQKQCRVSVCGKFSPQDIAIKIRKKTNRRVEILEIQECDTFTENNDIQGPLI 79
           ++LE+HLIEQKQCRVSVCGKFSPQDIAIKIRKKTNRRVEILEIQECDTFTENNDIQGP I
Sbjct: 89  KELEDHLIEQKQCRVSVCGKFSPQDIAIKIRKKTNRRVEILEIQECDTFTENNDIQGPFI 148

Query: 80  INAWKCQSNYDQAETCCKHEGDTEEKEELASSI 113
           INAWKCQSNYDQAE CCKHEG+ EEKEELASSI
Sbjct: 149 INAWKCQSNYDQAEICCKHEGNKEEKEELASSI 181

[Close]

BLAST of Lcy06g001810 vs. NCBI nr
Match: XP_022924036.1 (heavy metal-associated isoprenylated plant protein 7-like [Cucurbita moschata] >XP_023000671.1 heavy metal-associated isoprenylated plant protein 7-like [Cucurbita maxima] >XP_023519794.1 heavy metal-associated isoprenylated plant protein 7-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 181.0 bits (458), Expect = 5.6e-42
Identity = 86/93 (92.47%), Postives = 90/93 (96.77%), Query Frame = 0


Query: 20  EKLEEHLIEQKQCRVSVCGKFSPQDIAIKIRKKTNRRVEILEIQECDTFTENNDIQGPLI 79
           ++LE+HLIEQKQCRVSVCGKFSPQDIAIKIRKKTNRRVEILEIQECDTFTENNDIQGP I
Sbjct: 31  KELEDHLIEQKQCRVSVCGKFSPQDIAIKIRKKTNRRVEILEIQECDTFTENNDIQGPFI 90

Query: 80  INAWKCQSNYDQAETCCKHEGDTEEKEELASSI 113
           INAWKCQSNYDQAE CCKHEG+ EEKEELASSI
Sbjct: 91  INAWKCQSNYDQAEICCKHEGNKEEKEELASSI 123

[Close]

BLAST of Lcy06g001810 vs. TAIR 10
Match: AT3G25855.1 (Copper transport protein family )

HSP 1 Score: 52.0 bits (123), Expect = 3.7e-07
Identity = 19/45 (42.22%), Postives = 37/45 (82.22%), Query Frame = 0


Query: 20 EKLEEHLIEQKQCRVSVCGKFSPQDIAIKIRKKTNRRVEILEIQE 65
          ++++ H+I +K+ +V +CG+F P D+A+K+++K  RRVEILE+++
Sbjct: 32 KEVDTHMINKKERQVILCGRFRPSDVALKLQRKMKRRVEILEVED 76

The following BLAST results are available for this feature:

BLAST of Lcy06g001810 vs.


Match Name	E-value	Identity	Description

BLAST of Lcy06g001810 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3C5D5	1.9e-43	80.91	uncharacterized protein LOC103497018 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A6J1KGG9	2.7e-42	92.47	heavy metal-associated isoprenylated plant protein 7-like OS=Cucurbita maxima OX...	[more]
A0A6J1E8F0	2.7e-42	92.47	heavy metal-associated isoprenylated plant protein 7-like OS=Cucurbita moschata ...	[more]
A0A0A0LSZ0	1.1e-40	89.25	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G042260 PE=4 SV=1	[more]
A0A6J1C7L3	1.1e-40	91.40	heavy metal-associated isoprenylated plant protein 28-like isoform X4 OS=Momordi...	[more]

BLAST of Lcy06g001810 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008457333.1	3.9e-43	80.91	PREDICTED: uncharacterized protein LOC103497018 isoform X1 [Cucumis melo]	[more]
XP_038895027.1	1.1e-42	93.55	heavy metal-associated isoprenylated plant protein 7-like [Benincasa hispida]	[more]
KAG6584365.1	5.6e-42	92.47	Heavy metal-associated isoprenylated plant protein 26, partial [Cucurbita argyro...	[more]
KAG7019950.1	5.6e-42	92.47	Heavy metal-associated isoprenylated plant protein 26, partial [Cucurbita argyro...	[more]
XP_022924036.1	5.6e-42	92.47	heavy metal-associated isoprenylated plant protein 7-like [Cucurbita moschata] >...	[more]

BLAST of Lcy06g001810 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G25855.1	3.7e-07	42.22	Copper transport protein family	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR47294	OS08G0431150 PROTEIN	coord: 21..107

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy06g001810.1	Lcy06g001810.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0046872	metal ion binding