Lcy06g001290 (gene) Sponge gourd (P93075) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTGGAGAGTTTGAAGCAGCTGTATTTCCCTCTTCATAGATTCCTTGAAGCCACAGCCACTCCAAGTATAAACCTGTTTCATCAAACTCCTAAAGAAAGGAATTTTTGCAACTCCCAACCACAAGTCTCTCTTAAACCATAATCAAGAAAATCATGAACAAACTTTGTTCTCGTATACTTGCATCAAGGTTTGCGAATTCCTCCGCGACTTCTCACCCTTGCAAGGATTGCGCTTCTTTTGCCACACTAGCGCGAACCCATAATCAAAACCACCTCTTTGGCTCTTTCATCACTCGCCCAGTTCAGGATCACTCGCGTTCATGGAGTTCACATCGAAGTTTTGCGGAGAAAATTCATGGCTTTCTCTCCGGCCCGGTGGTCGGACGGCGATTCATGTTGAATCCTTCAAACACCCTTTTTAAGGGGTCGATTAAGAGTCTAGTAGAAAGCAGGTTACGCTTTATGGGAGGTCGATTTTCGAAACTGAGATTTCAGTTGAAACCAGGTTTTGATTATCAATGGCGAGGCAGGTAATGTGTTTGTTCTGTTTGCCGTTTTGGTTGTTTTATCTGAAAATTAGCTTGTGACATGCACGAATGAATTCGTTGCTAAAGAATTTGAAGACCTTGTTTAAATCAATTCACTCAGCGCTGAATTTCCTATAGTTTCCAGATAATTTCATATTTTCCCAATTGCATTGTTGGGAAATCTAAACTGTTCAAGAACAATTATTATGCTGATTACTACTGGAAATGGCATGAGGAAAGATGTGAAGCTTCTGACTTCGTCAAATAAGTTCAACCACTCCATTTTCTCTGTACTTTATTTATTAGTGTAGTTTCACTAAATGTTACTGGGTTTTGTGTAATAATATGGGAATGATTGAATGAAACATGTTCTAGAGAACGTCTGAGAGTTAGAAGACAGAACACGGTTATTCTTTGATATTGGGAGTTCTTGAAAATTTTTGGAACCTGATCTTTACAATTAGAAGGATAACATCATGATGCTCTCTGTTTCATTCGAGACTAGCATTGTTTGTAGGTGTCCCCCATAGCATAGTGACTCTAACCTAGATTAATGCTATCATGAAACTCCCTTCTTTATTATTTTAGGATTAGCAATGTTATTATCTTGGGTTACTTTTTGTTATTATTTAACATATCAAAATGACTTAATACAACCTTCTATATTTGAATAGGCTTGGTGGATCTTTTAGTATTGAATACATTAAAACAGGTCATGATCATTTTAACAAAGGGGAGGATACTCGGTATCTGATAAAGAGTGTTGATTATTTGGGAAAGTTCTTATTTTCATTTCTCCTATTCACAGGAGACCCTGGTTTCAAAGGCTAACACCTAATGACGTGGTGTTGGGCTTGATTATAGCTAATGTTGCTGTTTTCCTCCTCTGGCGGACTGCTGATCCTATTTTTATGTCAAAAAACTTTACTGTAAGTCCTTGATTTCAATTACATGCCTCAGAATTGTAGGCACAGTTGGACATTGTTTCTTCTCAACGCTCACTTTGCTTAGGATCCACTTTCTCTTGGATTGAGACACTATTGATGTCCTCTGGGAACTCTTAAGGGGCTATTCCTGAGGGAATCGGGATTTATGGGAAGAAAATAATGTTTAGAAATCTAGATATACAGGTATTTGCATGATTAGAAATCAAGAAGAATCATGTTTATTTTGTATGATATATTCACGACAATCATGTGCTGATGGCTGAAAATAGTAGATAACTATGTTTGTTTTCCGAGATTTGTCCTTATGGTTGTAACAAAATCATCATTCATCATTTTGTTCTACTAATGCCTCTATAATATGAAATGTGAGGATCTGGATTTCCAATAGGATAGGTATCTTTAAAATCCATCTCATCTCACGAGTATTCAAATTACCCCTTCATTGGCATCTAGGATGTCCAAACACCCAAGATGCTTAGTAAACTACAGTTCTTGGAAGAGAAACATGAACATTCAGGATTTCTGAAGATGAATGGCCTCTAAAAGTTGTGATCAACTTAACATCATTAGTAGTTTTCATTTTCATTTTTTCAAATTGATAAACATGTTTTGAGAAATATTTGTGTCAAAATTAAGAAATTAGATGCAATTTTGGAAGGTTTAAGTTCCAAAGTTTCGAACTTCAATTCAACTGTTCGCTTTTGGTAACAATATCTTTTCAATGTTTCAATGTTATCTATGCAGATCTCTGTAGAAAATGTTAGAAGTGGCCGCATACATACATTGATTACCTCCGCCTTCAGTCACGTAGAAATTGGCCATATAGTATCCAACATGATTGGACTATACTTCTTCGGGATGAATGTATGGCTATCTTCCTTTGAACTTCTATTAGGTCATGATTTTTATTTTATTTTAGTTACTTTTCTCCTCTGTTTATATGTGGGCGTCTTATGCAAAATTTTTTGTTACGACTGTTTGCTACTTTCCCCCTTTTTGGCTTATTCTAATATTGTAGTTGTTTATATTCTACTTTTTTCCATAGTTTTTATCTCATTTTGGGGTAGCTATGGTAATCTAATATATTTTAACAACCAAATCTGAAAATCTATCTTAAAGTTATTCCTTGTGAATAAAAAAAACTTTGTAAAAGGACTTGCTGCAACTAATATTGATTAATGAACATCATATGTGCCTTGTATGCTAATCTTAGAGTTGATGCTGGATTTGGAGCAATATATTTTGATTCAAGTTCTTGTAGGGTGAGCTTCGGATTAACTTCTGGATATGTAAGAAGTGCTCAAGCCCATTAAAAACATTTTTCAAAATTTACATACACGCTATATGGTGTGGTTAAAAGCACTTATAGAAGAAGTGCGCATCCCAAACTCACTGTTAGTCTACTTGTGAACTGTATTCCAATCCATCCTGTTTGTCTCATGAGTTTGAATGTTACTTGTAAAGTTACCCTAAACCCTAAAGCACTTATAGAAGAAGTGCGCATACCAAACTCACTGTTAGTCTACGTGTGAACTGTAATCCAATCCATCCTGTTTGTCCCATGAGTTTGAATGTTACTTATAAAGTTACCCTTTCTGTCTTGTCATGGTCTTTCCAGAACATAATAGTGACCTATTAGTGTTAAAACTTACCTTTTTCTTAGCCCTGTTAGAATTGATACTTGATCTGCGCGGTGTAAGCTCATACATTTTGCCTTTAACAGATAGGTAGAGTATTTGGTCCTGAGTTTTTGTTGAAATTGTATCTGGCTGGAGCAATTGGTGGGTCAGCGTTTTACTTGGCGCATCATCTGTTTCAAGCATCGTCCTCAAAGGTATGCAAATTCTGTCAAATAATTATATATGGGCTCTATTCTTTCATTCAAATTTCAGGGACACAGTAGCAAAATTCGCATCAGAGATGTAACTGCTTCTGATAAGATGCAAAGGCAGCATAAATTTTTAATTTAGATTTATATTATGCTGGATTCACTCAACTAGAATAAAAGCTTCATTTGGTAACTTTCATGTTGTTAAGAACGTTCTATACCAATTGTGCTTTCATAATGGTAGAAGAGTTCAACTGTCAATGGAACCAACCATCTTGACTGAGAACTTTTCTTGTTATATTAACCCACTGGCTATTTGTCAACTGTTCTATAAACTGAATCTTAAACAGTGTTTGTTTACTCATTTTCTGCTTTCAACAGGGTCGGCCGTTTTGGGGCAAGGACCCGATACGAGCACAAGGATTGGTATGCTTTTGGAAATCCTTCTCTGCTTAGTTCATTACTTTTTAGGCCGTAGGATTCAATCAAGACTCCTGATATTCTCATCAATGAACCTGTTCCGACTCGAAATTTGTTTTTCTGAAATATTCGTATGTCGTATGCTCTGTGTAAATTGTTTTTCCTATTGGTTGGATATGAGGCTTCGTTCCTTTAATCTTACATTGTACCGATCGCCTTTGGCTTACAAGCATCGGGATACTCATTAGAACTTGAATCATCAATTCATCATTGCTATTCATTTTGCTTGATCACTTAGGGTGCGAGCGGAGCCGTGAACGCTATCATGCTGCTTGATATATTCCTCTTCCCAAAGTCGACCCTCTATCTCGAATTCTTTATACCTGTTCCTGCCATCTTACTGGTAAGCTCCACTCCAAATAGCAAAAAGATTCACAGTTCACTATGAAAAATCCTGAAATAGTCCTTGTGGTTTCATTACAGGGCATTTTTCTCATTGGAAAAGACATGTTGAGGATACTAGAGGTATAATGTTTAATCTAATAACCAAACTTCTCCATCCAACTCCATCTTCAGTTCTTCACTCTATTCCATATGGATAGCCTTCTACTGTTTTACAAATTCATGAAACCTGTTTGATCTCTGCAGAATGACAGCCAAATTTCAGGATCTGCCCACCTGGGGGGTGCTGCAGTTGCAGCCTTGGCCTGGGCCCGAGTTCGCCGAGGACGTTTCTGAATATCGGAAGAATTTTCGTACCCACAATCTAGATTCGATACAGCAATGCCCATCATCAACTTTTTCCTAATCCTCACTCATTCCACATTTTCTTTCTAGTGTATAGAAGATGAATGATTCTTCATGGTTTAATTGGTTTTATACATTTATATTCCATGACATGATTTGTTGATTTAACTTCTGATAGTCAATATATGTCACACTGCCTAATGCCTGCCTATCCATTGGAGCCAATTTGCAGATCTTTTATTCACAAAAATATATATTTTTTTTCCATTTTGATTAAATTTCTATTCCAAGTTTAATTTTTTTAGTTTTGTAATGGATGCAAATTGTAATAAAGCAAATGAAATGGGGGGACCATGGTTAGAAC TTGGAGAGTTTGAAGCAGCTGTATTTCCCTCTTCATAGATTCCTTGAAGCCACAGCCACTCCAAGTATAAACCTGTTTCATCAAACTCCTAAAGAAAGGAATTTTTGCAACTCCCAACCACAAGTCTCTCTTAAACCATAATCAAGAAAATCATGAACAAACTTTGTTCTCGTATACTTGCATCAAGGTTTGCGAATTCCTCCGCGACTTCTCACCCTTGCAAGGATTGCGCTTCTTTTGCCACACTAGCGCGAACCCATAATCAAAACCACCTCTTTGGCTCTTTCATCACTCGCCCAGTTCAGGATCACTCGCGTTCATGGAGTTCACATCGAAGTTTTGCGGAGAAAATTCATGGCTTTCTCTCCGGCCCGGTGGTCGGACGGCGATTCATGTTGAATCCTTCAAACACCCTTTTTAAGGGGTCGATTAAGAGTCTAGTAGAAAGCAGGTTACGCTTTATGGGAGGTCGATTTTCGAAACTGAGATTTCAGTTGAAACCAGGTTTTGATTATCAATGGCGAGGCAGGAGACCCTGGTTTCAAAGGCTAACACCTAATGACGTGGTGTTGGGCTTGATTATAGCTAATGTTGCTGTTTTCCTCCTCTGGCGGACTGCTGATCCTATTTTTATGTCAAAAAACTTTACTATCTCTGTAGAAAATGTTAGAAGTGGCCGCATACATACATTGATTACCTCCGCCTTCAGTCACGTAGAAATTGGCCATATAGTATCCAACATGATTGGACTATACTTCTTCGGGATGAATATAGGTAGAGTATTTGGTCCTGAGTTTTTGTTGAAATTGTATCTGGCTGGAGCAATTGGTGGGTCAGCGTTTTACTTGGCGCATCATCTGTTTCAAGCATCGTCCTCAAAGGGTCGGCCGTTTTGGGGCAAGGACCCGATACGAGCACAAGGATTGGGTGCGAGCGGAGCCGTGAACGCTATCATGCTGCTTGATATATTCCTCTTCCCAAAGTCGACCCTCTATCTCGAATTCTTTATACCTGTTCCTGCCATCTTACTGGGCATTTTTCTCATTGGAAAAGACATGTTGAGGATACTAGAGAATGACAGCCAAATTTCAGGATCTGCCCACCTGGGGGGTGCTGCAGTTGCAGCCTTGGCCTGGGCCCGAGTTCGCCGAGGACGTTTCTGAATATCGGAAGAATTTTCGTACCCACAATCTAGATTCGATACAGCAATGCCCATCATCAACTTTTTCCTAATCCTCACTCATTCCACATTTTCTTTCTAGTGTATAGAAGATGAATGATTCTTCATGGTTTAATTGGTTTTATACATTTATATTCCATGACATGATTTGTTGATTTAACTTCTGATAGTCAATATATGTCACACTGCCTAATGCCTGCCTATCCATTGGAGCCAATTTGCAGATCTTTTATTCACAAAAATATATATTTTTTTTCCATTTTGATTAAATTTCTATTCCAAGTTTAATTTTTTTAGTTTTGTAATGGATGCAAATTGTAATAAAGCAAATGAAATGGGGGGACCATGGTTAGAAC ATGAACAAACTTTGTTCTCGTATACTTGCATCAAGGTTTGCGAATTCCTCCGCGACTTCTCACCCTTGCAAGGATTGCGCTTCTTTTGCCACACTAGCGCGAACCCATAATCAAAACCACCTCTTTGGCTCTTTCATCACTCGCCCAGTTCAGGATCACTCGCGTTCATGGAGTTCACATCGAAGTTTTGCGGAGAAAATTCATGGCTTTCTCTCCGGCCCGGTGGTCGGACGGCGATTCATGTTGAATCCTTCAAACACCCTTTTTAAGGGGTCGATTAAGAGTCTAGTAGAAAGCAGGTTACGCTTTATGGGAGGTCGATTTTCGAAACTGAGATTTCAGTTGAAACCAGGTTTTGATTATCAATGGCGAGGCAGGAGACCCTGGTTTCAAAGGCTAACACCTAATGACGTGGTGTTGGGCTTGATTATAGCTAATGTTGCTGTTTTCCTCCTCTGGCGGACTGCTGATCCTATTTTTATGTCAAAAAACTTTACTATCTCTGTAGAAAATGTTAGAAGTGGCCGCATACATACATTGATTACCTCCGCCTTCAGTCACGTAGAAATTGGCCATATAGTATCCAACATGATTGGACTATACTTCTTCGGGATGAATATAGGTAGAGTATTTGGTCCTGAGTTTTTGTTGAAATTGTATCTGGCTGGAGCAATTGGTGGGTCAGCGTTTTACTTGGCGCATCATCTGTTTCAAGCATCGTCCTCAAAGGGTCGGCCGTTTTGGGGCAAGGACCCGATACGAGCACAAGGATTGGGTGCGAGCGGAGCCGTGAACGCTATCATGCTGCTTGATATATTCCTCTTCCCAAAGTCGACCCTCTATCTCGAATTCTTTATACCTGTTCCTGCCATCTTACTGGGCATTTTTCTCATTGGAAAAGACATGTTGAGGATACTAGAGAATGACAGCCAAATTTCAGGATCTGCCCACCTGGGGGGTGCTGCAGTTGCAGCCTTGGCCTGGGCCCGAGTTCGCCGAGGACGTTTCTGA MNKLCSRILASRFANSSATSHPCKDCASFATLARTHNQNHLFGSFITRPVQDHSRSWSSHRSFAEKIHGFLSGPVVGRRFMLNPSNTLFKGSIKSLVESRLRFMGGRFSKLRFQLKPGFDYQWRGRRPWFQRLTPNDVVLGLIIANVAVFLLWRTADPIFMSKNFTISVENVRSGRIHTLITSAFSHVEIGHIVSNMIGLYFFGMNIGRVFGPEFLLKLYLAGAIGGSAFYLAHHLFQASSSKGRPFWGKDPIRAQGLGASGAVNAIMLLDIFLFPKSTLYLEFFIPVPAILLGIFLIGKDMLRILENDSQISGSAHLGGAAVAALAWARVRRGRF Homology
BLAST of Lcy06g001290 vs. ExPASy Swiss-Prot
Match: Q9FZ81 (RHOMBOID-like protein 12, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=RBL12 PE=2 SV=1) HSP 1 Score: 325.5 bits (833), Expect = 7.2e-88 Identity = 179/329 (54.41%), Postives = 230/329 (69.91%), Query Frame = 0
BLAST of Lcy06g001290 vs. ExPASy Swiss-Prot
Match: Q84WG3 (Rhomboid-like protein 16, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RBL16 PE=2 SV=1) HSP 1 Score: 197.2 bits (500), Expect = 3.0e-49 Identity = 117/281 (41.64%), Postives = 164/281 (58.36%), Query Frame = 0
BLAST of Lcy06g001290 vs. ExPASy Swiss-Prot
Match: B3H707 (Rhomboid-like protein 17, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RBL17 PE=2 SV=1) HSP 1 Score: 168.7 bits (426), Expect = 1.1e-40 Identity = 111/282 (39.36%), Postives = 155/282 (54.96%), Query Frame = 0
BLAST of Lcy06g001290 vs. ExPASy Swiss-Prot
Match: P53259 (Rhomboid protein 1, mitochondrial OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=PCP1 PE=1 SV=1) HSP 1 Score: 67.0 bits (162), Expect = 4.6e-10 Identity = 57/194 (29.38%), Postives = 90/194 (46.39%), Query Frame = 0
BLAST of Lcy06g001290 vs. ExPASy Swiss-Prot
Match: Q58EK4 (Presenilins-associated rhomboid-like protein, mitochondrial OS=Danio rerio OX=7955 GN=parl PE=2 SV=1) HSP 1 Score: 51.2 bits (121), Expect = 2.6e-05 Identity = 51/187 (27.27%), Postives = 86/187 (45.99%), Query Frame = 0
BLAST of Lcy06g001290 vs. ExPASy TrEMBL
Match: A0A6J1C609 (RHOMBOID-like protein 12, mitochondrial OS=Momordica charantia OX=3673 GN=LOC111008595 PE=3 SV=1) HSP 1 Score: 589.0 bits (1517), Expect = 1.3e-164 Identity = 293/336 (87.20%), Postives = 311/336 (92.56%), Query Frame = 0
BLAST of Lcy06g001290 vs. ExPASy TrEMBL
Match: A0A6J1E6X7 (RHOMBOID-like protein 12, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111431274 PE=3 SV=1) HSP 1 Score: 586.3 bits (1510), Expect = 8.3e-164 Identity = 298/336 (88.69%), Postives = 310/336 (92.26%), Query Frame = 0
BLAST of Lcy06g001290 vs. ExPASy TrEMBL
Match: A0A6J1KPT4 (RHOMBOID-like protein 12, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111495401 PE=3 SV=1) HSP 1 Score: 584.7 bits (1506), Expect = 2.4e-163 Identity = 298/336 (88.69%), Postives = 309/336 (91.96%), Query Frame = 0
BLAST of Lcy06g001290 vs. ExPASy TrEMBL
Match: A0A1S3BSX2 (RHOMBOID-like protein 12, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103493123 PE=3 SV=1) HSP 1 Score: 578.2 bits (1489), Expect = 2.3e-161 Identity = 290/336 (86.31%), Postives = 308/336 (91.67%), Query Frame = 0
BLAST of Lcy06g001290 vs. ExPASy TrEMBL
Match: A0A5D3BLA0 (RHOMBOID-like protein 12 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G001490 PE=3 SV=1) HSP 1 Score: 576.6 bits (1485), Expect = 6.6e-161 Identity = 289/336 (86.01%), Postives = 307/336 (91.37%), Query Frame = 0
BLAST of Lcy06g001290 vs. NCBI nr
Match: XP_022137034.1 (RHOMBOID-like protein 12, mitochondrial [Momordica charantia]) HSP 1 Score: 589.0 bits (1517), Expect = 2.7e-164 Identity = 293/336 (87.20%), Postives = 311/336 (92.56%), Query Frame = 0
BLAST of Lcy06g001290 vs. NCBI nr
Match: XP_038893963.1 (RHOMBOID-like protein 12, mitochondrial [Benincasa hispida]) HSP 1 Score: 587.8 bits (1514), Expect = 5.9e-164 Identity = 300/336 (89.29%), Postives = 310/336 (92.26%), Query Frame = 0
BLAST of Lcy06g001290 vs. NCBI nr
Match: XP_022923619.1 (RHOMBOID-like protein 12, mitochondrial [Cucurbita moschata]) HSP 1 Score: 586.3 bits (1510), Expect = 1.7e-163 Identity = 298/336 (88.69%), Postives = 310/336 (92.26%), Query Frame = 0
BLAST of Lcy06g001290 vs. NCBI nr
Match: KAG7019987.1 (RHOMBOID-like protein 12, mitochondrial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 585.1 bits (1507), Expect = 3.8e-163 Identity = 298/336 (88.69%), Postives = 309/336 (91.96%), Query Frame = 0
BLAST of Lcy06g001290 vs. NCBI nr
Match: XP_023001193.1 (RHOMBOID-like protein 12, mitochondrial [Cucurbita maxima]) HSP 1 Score: 584.7 bits (1506), Expect = 5.0e-163 Identity = 298/336 (88.69%), Postives = 309/336 (91.96%), Query Frame = 0
BLAST of Lcy06g001290 vs. TAIR 10
Match: AT1G18600.1 (RHOMBOID-like protein 12 ) HSP 1 Score: 325.5 bits (833), Expect = 5.1e-89 Identity = 179/329 (54.41%), Postives = 230/329 (69.91%), Query Frame = 0
BLAST of Lcy06g001290 vs. TAIR 10
Match: AT1G74130.1 (Rhomboid-related intramembrane serine protease family protein ) HSP 1 Score: 197.2 bits (500), Expect = 2.1e-50 Identity = 117/281 (41.64%), Postives = 164/281 (58.36%), Query Frame = 0
BLAST of Lcy06g001290 vs. TAIR 10
Match: AT1G74130.2 (Rhomboid-related intramembrane serine protease family protein ) HSP 1 Score: 171.4 bits (433), Expect = 1.2e-42 Identity = 103/250 (41.20%), Postives = 143/250 (57.20%), Query Frame = 0
BLAST of Lcy06g001290 vs. TAIR 10
Match: AT1G74140.5 (Rhomboid-related intramembrane serine protease family protein ) HSP 1 Score: 168.7 bits (426), Expect = 8.0e-42 Identity = 111/282 (39.36%), Postives = 155/282 (54.96%), Query Frame = 0
BLAST of Lcy06g001290 vs. TAIR 10
Match: AT1G74140.1 (Rhomboid-related intramembrane serine protease family protein ) HSP 1 Score: 167.5 bits (423), Expect = 1.8e-41 Identity = 111/282 (39.36%), Postives = 154/282 (54.61%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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