Lcy06g000420 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy06g000420
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	UPF0426 protein At1g28150, chloroplastic
Location	Chr06: 469059 .. 471321 (-)
RNA-Seq Expression	Lcy06g000420
Synteny	Lcy06g000420

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAATTGCGAGCGAAATTAAACAAACGATTGAAGCCATTACCTCCCAAATATCTTCAGCCTCTTCTTCCAGCCTTCGTTCACTCTGAAGCAAGAGCATTAGCATCATCGGAGATTATCAATGGCGGGTCTTCTTCTACACTCCTCTTCAACTGCCAGCGTTCTGGTACGCTCGATTCTACTCTTTAATTGCTCCGCCCTTTCCTTTCGTTGCTTTCTATCCCCCTTCTTCGATGTTATTGATTTTCCTCTTTGATTCTATTGAAAGTTTGGAGGAATGGGGAAACTAAAGGAACGGAATCATAATTCAATTTTATCATCCAAGAAACGGAAACCTATGCGTGGCACCTATCTTCCTCTTGGTTGCAATAATTCTACAAATGGCATCTGCGCCTTTTTCTTCAATCCTGCAGAGGATCCCGTCATCAAAGAAGCTCTGAAGGTATCCTAATAACTCTTAAATGAAAAACCCTTCGTTGTTTCTACTTGGATTTAGGCACTTCTTTGATTGCTGAGTATGTGCAACTGCAATATAATGGAGGATACAATTAATTTCCTATTGTATGCTCATAGCACTTGAAAGACAAATTATCTTCGATACTTGTTTGTCTCTTCGAGTAGATAACAAATATGGTCAAAAACTGGACCAAACTCACTCTTAATTTTCAATGTAGTTCTGGAAATAGATCTAACCCGGTTTCTAAGATTGTTGAACCAGTGATGGAATAAACAGATTTGGAAATATGAGAACCATAGTTCATTCTTTCTCCCCTGCTGCTAACTTTTCTTTGTGATGTCTTGGCTAATTGAATTAACCGTTCTGTTTCTTTGATGATGACCACATAAAATAAGTATTATTGACAACCAAATAACTCTTATGATCTGCAAGTAACAATCTTGAACTAACTTCAAGGGAGAAAAGAATATGCCTTTATGATCTGGAACGCTATTTGTTGAGGGAAATGTGAAAATATGTTTATACTTTGTAAACTCCATTCCTTTTAGGGGGTGGGGAGTAATATGCTCACTTCAATGGAAAGTTTGCCAATTTAGTATTTTCTCACTTCAAAGGTTATATTGAGTTGGTATTACTTTCACAAGTCCTTTGAACCATGGTTTTCATATTTATGAATCTCTGATTCTCTATATTGGTTACCGTAGAACCATAATCTTACAGGAGGAAGATAATAAGACAGTTGGTGCATGGATCTCTCTGTTGTTGTAAAAAAGACTGAGACTAAACACTTTTTACCCTACACCTTCCCTGTTCTGATTTTCTCCTTGAATTGAATCATTACACTCCTTTGTACTCGAATTCTGCCCATCAAAGTAGGAACTCTCCTAATGGATACCCACAAGATTGATGAGTCATGGCTGAAAGAAGCAGGATTGTTTGGGTTTGGGAATTTAATTTTTTGCTGATTCTTGCCTCATTGCTTAGTAAGATTGAAATTTGCTAGAAGCTTATTGTTATTGGCATCTCATCACTAAGATCCGTCAATGGTGTGTTGGCTTTCACTCATGATATTGCTGAACAGGCAACAGGCTCATCTGAGATTTAATGTTTGGTGATTTCCAAAATCCTTACCACTATCAAACAAGTGGAAAGTAAAAATCACTTCATTATGCCACATACATTTCCATAAAATTTAAACAATAGAATAAGATGCTGAGGCTTTGTTGGGTGAGCAGTATGAGTTCTTTAGATGAGGACATGTTATGAAATGCTTCTGCTTTGTAGTTTATATGGAACATAGTATTATTAAAGTAATTTAATTGTGTGGGTGTAGGAGCCGGTTGCTTTCGCAGGTGGGCTATTTGCTGGACTTCTAAGGCTTGATTTGAACGAAGATCCATTAAAGGAATGGGTTAAGAAGACGGTGGAATCTGCTGGAATCACAGAAGAAGTTGACACTCAAGGATCTGTACAAGAGGATGGCCCAACCGAGATTGAGATTGAATGATAATTCATTTGAACTAAGATTAGCCAGATAGTATCAATGTTTTGAAGGTGTTTTTCTTTTTTTCTTTCAAAATAATGTTATCTATAAAACTATTAATGGAATTATGGTAATAGCGAGCACCCATTTCTTTGAATCCTGATATGGTTAGATTTTCCATTCAAGCTTTCCGGCAAAAAGTTTTCGAAAGAGATTGAATTTGGAATGTCAATAGAACACATCCAGAAACCAAATGATTGGAAGACTCAAACATTATACTGCATTATTAATAATTTGAACTCATATCTGCACCATTTTCTGGATCG

mRNA sequence

CAATTGCGAGCGAAATTAAACAAACGATTGAAGCCATTACCTCCCAAATATCTTCAGCCTCTTCTTCCAGCCTTCGTTCACTCTGAAGCAAGAGCATTAGCATCATCGGAGATTATCAATGGCGGGTCTTCTTCTACACTCCTCTTCAACTGCCAGCGTTCTGTTTGGAGGAATGGGGAAACTAAAGGAACGGAATCATAATTCAATTTTATCATCCAAGAAACGGAAACCTATGCGTGGCACCTATCTTCCTCTTGGTTGCAATAATTCTACAAATGGCATCTGCGCCTTTTTCTTCAATCCTGCAGAGGATCCCGTCATCAAAGAAGCTCTGAAGGAGCCGGTTGCTTTCGCAGGTGGGCTATTTGCTGGACTTCTAAGGCTTGATTTGAACGAAGATCCATTAAAGGAATGGGTTAAGAAGACGGTGGAATCTGCTGGAATCACAGAAGAAGTTGACACTCAAGGATCTGTACAAGAGGATGGCCCAACCGAGATTGAGATTGAATGATAATTCATTTGAACTAAGATTAGCCAGATAGTATCAATGTTTTGAAGGTGTTTTTCTTTTTTTCTTTCAAAATAATGTTATCTATAAAACTATTAATGGAATTATGGTAATAGCGAGCACCCATTTCTTTGAATCCTGATATGGTTAGATTTTCCATTCAAGCTTTCCGGCAAAAAGTTTTCGAAAGAGATTGAATTTGGAATGTCAATAGAACACATCCAGAAACCAAATGATTGGAAGACTCAAACATTATACTGCATTATTAATAATTTGAACTCATATCTGCACCATTTTCTGGATCG

Coding sequence (CDS)

ATGGCGGGTCTTCTTCTACACTCCTCTTCAACTGCCAGCGTTCTGTTTGGAGGAATGGGGAAACTAAAGGAACGGAATCATAATTCAATTTTATCATCCAAGAAACGGAAACCTATGCGTGGCACCTATCTTCCTCTTGGTTGCAATAATTCTACAAATGGCATCTGCGCCTTTTTCTTCAATCCTGCAGAGGATCCCGTCATCAAAGAAGCTCTGAAGGAGCCGGTTGCTTTCGCAGGTGGGCTATTTGCTGGACTTCTAAGGCTTGATTTGAACGAAGATCCATTAAAGGAATGGGTTAAGAAGACGGTGGAATCTGCTGGAATCACAGAAGAAGTTGACACTCAAGGATCTGTACAAGAGGATGGCCCAACCGAGATTGAGATTGAATGA

Protein sequence

MAGLLLHSSSTASVLFGGMGKLKERNHNSILSSKKRKPMRGTYLPLGCNNSTNGICAFFFNPAEDPVIKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTVESAGITEEVDTQGSVQEDGPTEIEIE

Homology

[Close]

BLAST of Lcy06g000420 vs. ExPASy Swiss-Prot
Match: Q9FZ89 (UPF0426 protein At1g28150, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At1g28150 PE=1 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 2.1e-19
Identity = 48/74 (64.86%), Postives = 60/74 (81.08%), Query Frame = 0


Query: 60  FNPAEDPVIKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTVESAGIT-EEVDTQGS 119
           FN  ++P++ EALKEP+AF GG+FAGLLRLDLNE+PLK+WV +TVE++GIT EEVD  G 
Sbjct: 50  FNLPQEPILSEALKEPIAFLGGMFAGLLRLDLNEEPLKDWVTRTVEASGITEEEVDADGV 109

Query: 120 V--QEDGPTEIEIE 131
           V   ED P +IEIE
Sbjct: 110 VSNDEDSPQQIEIE 123

[Close]

BLAST of Lcy06g000420 vs. ExPASy Swiss-Prot
Match: P74786 (UPF0426 protein ssl0294 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN=ssl0294 PE=3 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 9.2e-07
Identity = 27/67 (40.30%), Postives = 44/67 (65.67%), Query Frame = 0


Query: 66  PVIKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTVESAGITE--EVDTQGSVQEDG 125
           PV +E  ++P+AFAGG  +G+LRL L +DPLK+W++K     G+T+    D   + Q++ 
Sbjct: 8   PVTRELCQQPIAFAGGFVSGVLRLKLTDDPLKKWLQK----QGVTDFSGADINQTAQDNR 67

Query: 126 PTEIEIE 131
           P  I+I+
Sbjct: 68  PQSIDID 70

[Close]

BLAST of Lcy06g000420 vs. ExPASy Swiss-Prot
Match: Q8YQ06 (UPF0426 protein asl4034 OS=Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) OX=103690 GN=asl4034 PE=3 SV=1)

HSP 1 Score: 44.7 bits (104), Expect = 9.5e-04
Identity = 21/65 (32.31%), Postives = 36/65 (55.38%), Query Frame = 0


Query: 66  PVIKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTVESAGITEEVDTQGSVQEDGPT 125
           P+ K+ ++ P +F GG  +G+LRL+L +DP+K W+ K       +  V    + +  GP 
Sbjct: 8   PIFKQLVQHPASFLGGFASGVLRLNLADDPVKSWLDKQRGVNSYSFPVTDAHNGKASGPQ 67

Query: 126 EIEIE 131
            I I+
Sbjct: 68  SISID 72

[Close]

BLAST of Lcy06g000420 vs. ExPASy TrEMBL
Match: A0A5D3BGH6 (UPF0426 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G00680 PE=4 SV=1)

HSP 1 Score: 221.1 bits (562), Expect = 2.7e-54
Identity = 114/130 (87.69%), Postives = 120/130 (92.31%), Query Frame = 0


Query: 1   MAGLLLHSSSTASVLFGGMGKLKERNHNSILSSKKRKPMRGTYLPLGCNNSTNGICAFFF 60
           MA LLLHSSSTASVLFG MGKLK R+H+SILSSK  KPMR ++L LG NNSTNGI AFFF
Sbjct: 1   MAALLLHSSSTASVLFGEMGKLKARSHHSILSSK--KPMRSSFLRLGSNNSTNGISAFFF 60

Query: 61  NPAEDPVIKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTVESAGITEEVDTQGSVQ 120
           NP EDPV+KEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTVESAG+TEEVDTQGSVQ
Sbjct: 61  NPVEDPVLKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTVESAGLTEEVDTQGSVQ 120

Query: 121 EDGPTEIEIE 131
           EDGPTEIEIE
Sbjct: 121 EDGPTEIEIE 128

[Close]

BLAST of Lcy06g000420 vs. ExPASy TrEMBL
Match: A0A1S3AZP7 (UPF0426 protein At1g28150, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103484480 PE=4 SV=1)

HSP 1 Score: 221.1 bits (562), Expect = 2.7e-54
Identity = 114/130 (87.69%), Postives = 120/130 (92.31%), Query Frame = 0


Query: 1   MAGLLLHSSSTASVLFGGMGKLKERNHNSILSSKKRKPMRGTYLPLGCNNSTNGICAFFF 60
           MA LLLHSSSTASVLFG MGKLK R+H+SILSSK  KPMR ++L LG NNSTNGI AFFF
Sbjct: 1   MAALLLHSSSTASVLFGEMGKLKARSHHSILSSK--KPMRSSFLRLGSNNSTNGISAFFF 60

Query: 61  NPAEDPVIKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTVESAGITEEVDTQGSVQ 120
           NP EDPV+KEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTVESAG+TEEVDTQGSVQ
Sbjct: 61  NPVEDPVLKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTVESAGLTEEVDTQGSVQ 120

Query: 121 EDGPTEIEIE 131
           EDGPTEIEIE
Sbjct: 121 EDGPTEIEIE 128

[Close]

BLAST of Lcy06g000420 vs. ExPASy TrEMBL
Match: A0A6J1E8W6 (UPF0426 protein At1g28150, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111431718 PE=4 SV=1)

HSP 1 Score: 218.4 bits (555), Expect = 1.8e-53
Identity = 112/130 (86.15%), Postives = 116/130 (89.23%), Query Frame = 0


Query: 1   MAGLLLHSSSTASVLFGGMGKLKERNHNSILSSKKRKPMRGTYLPLGCNNSTNGICAFFF 60
           MAGLLLHSSSTASVL GGMGK +E N +SI S K  KPMR   L LGC+NSTNGICAF F
Sbjct: 1   MAGLLLHSSSTASVLLGGMGKFREGNRHSIFSPK--KPMRANRLRLGCSNSTNGICAFLF 60

Query: 61  NPAEDPVIKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTVESAGITEEVDTQGSVQ 120
           NP EDPV+KEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTVESAGITEEVDTQGSVQ
Sbjct: 61  NPLEDPVVKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTVESAGITEEVDTQGSVQ 120

Query: 121 EDGPTEIEIE 131
           EDGPTEIEIE
Sbjct: 121 EDGPTEIEIE 128

[Close]

BLAST of Lcy06g000420 vs. ExPASy TrEMBL
Match: A0A0A0LT92 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G032470 PE=4 SV=1)

HSP 1 Score: 216.5 bits (550), Expect = 6.7e-53
Identity = 112/130 (86.15%), Postives = 117/130 (90.00%), Query Frame = 0


Query: 1   MAGLLLHSSSTASVLFGGMGKLKERNHNSILSSKKRKPMRGTYLPLGCNNSTNGICAFFF 60
           MA LLLHSSSTASVLFG MGKLK RNHNSILSSK  KP+R ++  LG NNSTNGI AFFF
Sbjct: 1   MAALLLHSSSTASVLFGEMGKLKGRNHNSILSSK--KPVRSSFFRLGSNNSTNGISAFFF 60

Query: 61  NPAEDPVIKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTVESAGITEEVDTQGSVQ 120
           NP  DPV+KEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTVESAG+ EEVDTQGSVQ
Sbjct: 61  NPVGDPVLKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTVESAGLREEVDTQGSVQ 120

Query: 121 EDGPTEIEIE 131
           EDGPTEIEIE
Sbjct: 121 EDGPTEIEIE 128

[Close]

BLAST of Lcy06g000420 vs. ExPASy TrEMBL
Match: A0A6J1KGM3 (UPF0426 protein At1g28150, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111495083 PE=4 SV=1)

HSP 1 Score: 213.8 bits (543), Expect = 4.4e-52
Identity = 110/130 (84.62%), Postives = 113/130 (86.92%), Query Frame = 0


Query: 1   MAGLLLHSSSTASVLFGGMGKLKERNHNSILSSKKRKPMRGTYLPLGCNNSTNGICAFFF 60
           MAGLLLHSSSTA VL GGMGK +E N +SI S K  KPMR   L LGCNNSTN ICAF F
Sbjct: 1   MAGLLLHSSSTACVLLGGMGKFREGNRHSIFSPK--KPMRANCLRLGCNNSTNAICAFLF 60

Query: 61  NPAEDPVIKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTVESAGITEEVDTQGSVQ 120
            P EDPV+KEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTVESAGITEEVDTQGSVQ
Sbjct: 61  TPLEDPVVKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTVESAGITEEVDTQGSVQ 120

Query: 121 EDGPTEIEIE 131
           EDGPTEIEIE
Sbjct: 121 EDGPTEIEIE 128

[Close]

BLAST of Lcy06g000420 vs. NCBI nr
Match: XP_008439829.1 (PREDICTED: UPF0426 protein At1g28150, chloroplastic [Cucumis melo] >KAA0036065.1 UPF0426 protein [Cucumis melo var. makuwa] >TYJ98872.1 UPF0426 protein [Cucumis melo var. makuwa])

HSP 1 Score: 221.1 bits (562), Expect = 5.6e-54
Identity = 114/130 (87.69%), Postives = 120/130 (92.31%), Query Frame = 0


Query: 1   MAGLLLHSSSTASVLFGGMGKLKERNHNSILSSKKRKPMRGTYLPLGCNNSTNGICAFFF 60
           MA LLLHSSSTASVLFG MGKLK R+H+SILSSK  KPMR ++L LG NNSTNGI AFFF
Sbjct: 1   MAALLLHSSSTASVLFGEMGKLKARSHHSILSSK--KPMRSSFLRLGSNNSTNGISAFFF 60

Query: 61  NPAEDPVIKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTVESAGITEEVDTQGSVQ 120
           NP EDPV+KEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTVESAG+TEEVDTQGSVQ
Sbjct: 61  NPVEDPVLKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTVESAGLTEEVDTQGSVQ 120

Query: 121 EDGPTEIEIE 131
           EDGPTEIEIE
Sbjct: 121 EDGPTEIEIE 128

[Close]

BLAST of Lcy06g000420 vs. NCBI nr
Match: XP_022924196.1 (UPF0426 protein At1g28150, chloroplastic [Cucurbita moschata])

HSP 1 Score: 218.4 bits (555), Expect = 3.7e-53
Identity = 112/130 (86.15%), Postives = 116/130 (89.23%), Query Frame = 0


Query: 1   MAGLLLHSSSTASVLFGGMGKLKERNHNSILSSKKRKPMRGTYLPLGCNNSTNGICAFFF 60
           MAGLLLHSSSTASVL GGMGK +E N +SI S K  KPMR   L LGC+NSTNGICAF F
Sbjct: 1   MAGLLLHSSSTASVLLGGMGKFREGNRHSIFSPK--KPMRANRLRLGCSNSTNGICAFLF 60

Query: 61  NPAEDPVIKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTVESAGITEEVDTQGSVQ 120
           NP EDPV+KEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTVESAGITEEVDTQGSVQ
Sbjct: 61  NPLEDPVVKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTVESAGITEEVDTQGSVQ 120

Query: 121 EDGPTEIEIE 131
           EDGPTEIEIE
Sbjct: 121 EDGPTEIEIE 128

[Close]

BLAST of Lcy06g000420 vs. NCBI nr
Match: XP_004137400.1 (UPF0426 protein At1g28150, chloroplastic [Cucumis sativus])

HSP 1 Score: 216.5 bits (550), Expect = 1.4e-52
Identity = 112/130 (86.15%), Postives = 117/130 (90.00%), Query Frame = 0


Query: 1   MAGLLLHSSSTASVLFGGMGKLKERNHNSILSSKKRKPMRGTYLPLGCNNSTNGICAFFF 60
           MA LLLHSSSTASVLFG MGKLK RNHNSILSSK  KP+R ++  LG NNSTNGI AFFF
Sbjct: 1   MAALLLHSSSTASVLFGEMGKLKGRNHNSILSSK--KPVRSSFFRLGSNNSTNGISAFFF 60

Query: 61  NPAEDPVIKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTVESAGITEEVDTQGSVQ 120
           NP  DPV+KEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTVESAG+ EEVDTQGSVQ
Sbjct: 61  NPVGDPVLKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTVESAGLREEVDTQGSVQ 120

Query: 121 EDGPTEIEIE 131
           EDGPTEIEIE
Sbjct: 121 EDGPTEIEIE 128

[Close]

BLAST of Lcy06g000420 vs. NCBI nr
Match: XP_023518976.1 (UPF0426 protein At1g28150, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 216.1 bits (549), Expect = 1.8e-52
Identity = 111/130 (85.38%), Postives = 115/130 (88.46%), Query Frame = 0


Query: 1   MAGLLLHSSSTASVLFGGMGKLKERNHNSILSSKKRKPMRGTYLPLGCNNSTNGICAFFF 60
           MAGLLLHSSSTASVL GGMGK +E N + I S K  KPMR   L LGC+NSTNGICAF F
Sbjct: 1   MAGLLLHSSSTASVLLGGMGKFREGNRHLIFSPK--KPMRANCLRLGCSNSTNGICAFLF 60

Query: 61  NPAEDPVIKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTVESAGITEEVDTQGSVQ 120
           NP EDPV+KEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTVESAGITEEVDTQGSVQ
Sbjct: 61  NPLEDPVVKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTVESAGITEEVDTQGSVQ 120

Query: 121 EDGPTEIEIE 131
           EDGPTEIEIE
Sbjct: 121 EDGPTEIEIE 128

[Close]

BLAST of Lcy06g000420 vs. NCBI nr
Match: XP_038893812.1 (UPF0426 protein At1g28150, chloroplastic [Benincasa hispida])

HSP 1 Score: 215.7 bits (548), Expect = 2.4e-52
Identity = 110/130 (84.62%), Postives = 116/130 (89.23%), Query Frame = 0


Query: 1   MAGLLLHSSSTASVLFGGMGKLKERNHNSILSSKKRKPMRGTYLPLGCNNSTNGICAFFF 60
           MA LLLHSSS  SVLFG MGKLK RNH+SILSS   KP+RG +L L CNN TNGI AFFF
Sbjct: 1   MAALLLHSSSATSVLFGEMGKLKGRNHHSILSSD--KPVRGNFLRLRCNNPTNGISAFFF 60

Query: 61  NPAEDPVIKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTVESAGITEEVDTQGSVQ 120
           NP EDPV+KEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTVESAG+TEE+DTQGSVQ
Sbjct: 61  NPVEDPVLKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTVESAGLTEEIDTQGSVQ 120

Query: 121 EDGPTEIEIE 131
           EDGPTEIEIE
Sbjct: 121 EDGPTEIEIE 128

[Close]

BLAST of Lcy06g000420 vs. TAIR 10
Match: AT1G28150.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plastoglobule; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 96 Blast hits to 96 proteins in 44 species: Archae - 0; Bacteria - 56; Metazoa - 0; Fungi - 0; Plants - 40; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 96.7 bits (239), Expect = 1.5e-20
Identity = 48/74 (64.86%), Postives = 60/74 (81.08%), Query Frame = 0


Query: 60  FNPAEDPVIKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTVESAGIT-EEVDTQGS 119
           FN  ++P++ EALKEP+AF GG+FAGLLRLDLNE+PLK+WV +TVE++GIT EEVD  G 
Sbjct: 50  FNLPQEPILSEALKEPIAFLGGMFAGLLRLDLNEEPLKDWVTRTVEASGITEEEVDADGV 109

Query: 120 V--QEDGPTEIEIE 131
           V   ED P +IEIE
Sbjct: 110 VSNDEDSPQQIEIE 123

The following BLAST results are available for this feature:

BLAST of Lcy06g000420 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FZ89	2.1e-19	64.86	UPF0426 protein At1g28150, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At1g...	[more]
P74786	9.2e-07	40.30	UPF0426 protein ssl0294 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=11117...	[more]
Q8YQ06	9.5e-04	32.31	UPF0426 protein asl4034 OS=Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) ...	[more]

BLAST of Lcy06g000420 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BGH6	2.7e-54	87.69	UPF0426 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G0068...	[more]
A0A1S3AZP7	2.7e-54	87.69	UPF0426 protein At1g28150, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103484480...	[more]
A0A6J1E8W6	1.8e-53	86.15	UPF0426 protein At1g28150, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111...	[more]
A0A0A0LT92	6.7e-53	86.15	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G032470 PE=4 SV=1	[more]
A0A6J1KGM3	4.4e-52	84.62	UPF0426 protein At1g28150, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC11149...	[more]

BLAST of Lcy06g000420 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008439829.1	5.6e-54	87.69	PREDICTED: UPF0426 protein At1g28150, chloroplastic [Cucumis melo] >KAA0036065.1...	[more]
XP_022924196.1	3.7e-53	86.15	UPF0426 protein At1g28150, chloroplastic [Cucurbita moschata]	[more]
XP_004137400.1	1.4e-52	86.15	UPF0426 protein At1g28150, chloroplastic [Cucumis sativus]	[more]
XP_023518976.1	1.8e-52	85.38	UPF0426 protein At1g28150, chloroplastic [Cucurbita pepo subsp. pepo]	[more]
XP_038893812.1	2.4e-52	84.62	UPF0426 protein At1g28150, chloroplastic [Benincasa hispida]	[more]

BLAST of Lcy06g000420 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G28150.1	1.5e-20	64.86	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 111..130
IPR040278	UPF0426 protein	PANTHER	PTHR35996	OSJNBA0038O10.25 PROTEIN	coord: 41..130

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy06g000420.1	Lcy06g000420.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0043086	negative regulation of catalytic activity
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0030599	pectinesterase activity
molecular_function	GO:0046910	pectinesterase inhibitor activity