Lcy05g020890 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy05g020890
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	Ubiquitin
Location	Chr05: 49336010 .. 49338125 (-)
RNA-Seq Expression	Lcy05g020890
Synteny	Lcy05g020890

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAGATCTTCGTCAAAACCCTAACGGGGAAGACCATTACGCTGGAAGTTGAGTCCAGCGACACTATTGACAATGTCAAGGCCAAGATCCAGGATAAGGAGGGTACGTTCTTCTTTTTGGCCTTCGTACTTTTCATTCTCTAACCAAACGCCGTATCTGATATTCTTGCTGTTCTTTATTTCGATTTATGCCGTAAACTCTCCAGGTATTCCCCCCGACCAGCAACGGCTGATCTTTGCCGGAAAGCAGCTCGAGGATGGCCGCACTCTTGCTGACTACAACATCCAGAAAGGTAGCTTTAAGTTGAATTTTACGTAGAATACGAATTACACGAGGAAAATTTAGCTGAAATTACTGGTGTAGATGTTGTTACTGATTTTTTCTATTAGCGATTGAACTTGGTTAATTATCCATGCTTCTTTACTTGGGGTGGGGCGTCATAGATTTAAATGAACTGTGAAACATTGAAATCAGTGAGTTGGTGCTTGTTTCTTGTTTCAATGTTTTTGTATTCATCTTAAAACTATTAGCAGCGATTTGAATGGATGCGCGGTATTCTTTGCTATTTCCTATTAAGAAAAGATGGCATTCTTTGGGACTGGGTGATATATTGCTGTAGTTTTTTTTCCCTAAACGTATGTACTTTTAGGTACATTTGATTTGCGGTTTTCTTTTATTTGAGTGATTGCTGAGAAATTTCTGTTGATGTTTGATTGCTTCAATGGCTACTTTCTATTAAATCTAAAAGTAGTGTCCAGCGGGATTTCATTGAAACGTGTGGTTTTTAGAGTTTGGCCTGATTGGAAATTGAAAGATATCCTTCCACTTTTACCTACCACAAGCCTACTCTGTATGAACTAGTTTCATCTGCTTTTTCATTATTAAATTAAATGTACGATTTTCTTATTGTCTGGTCAGAATCAACACTTCATCTGGTTCTAAGGCTTCGTGGTGGGATTATTGAGCCATCTTTGATGGCATTGGCCAGGAAATATAACCAGGACAAGATGATTTGCCGCAAGTAAGTAATTTTTTGTTTTTGGTATTTCCTCATTCTAGAAGTAGAACTGGTATTTGAACTGAAACAACCGATTAACTAACTGAACAAGTTGATCCAAAGATTCTGAACCAACTGTTTGTTCAGTTTTTATACCTTTTCTTTATTTGTTTTGGTTTGAATAATTATAATAGTCATTTTTGGTCTGTGTTAAGTTTGGCTTTTTAAGAAACCCAAAAAATAAAACCAAGTTATGTGACTTTATCACACACGATTAGAAAAAAAGTAAACATAAAAATTGGAAACCAATTTGTATTTCAGTTCAAGTTCCGTTTCTAATAGTTATGTTATGACAGTAATCAATTTCAGCAAACAAAGAATAGAAAACGAGAAGAAATAATATAGATTTACGTGGTTCACTAACAAGATTATGGCAGTTTCGAATAAGAGGATTAATATATGGCACCTCTCTTAACCCTTATAGATTTGGTCGAAAATAAAGCCCAAAACGGAAATAACATAACTAATCTCTATACAAAAGTACTTCATTCGGTGCGCCAGATATATCAGATTCAAGGTATGTCAACAAATTTGATACAGTCTTAAGCCAAAGTCTTGTAGTTTGATGACTCTGGTTTTTTTTTAAAACATTGCTCTTCCTTTTATCTCCAACAACGCACTTTTGATGAGTGTGATATGAATTGCAAAACTTTACTTCCAGAAAATGGATTGTGTTTAAAGGTTTCTCTTTTATTTTTTGGGTCACAGATGTTATGCACGCCTGCATCCCCGTGCCGTCAACTGCCGGAAGAAGAAATGTGGACACAGCAATCAGGTAAAAGGGTATTTCTTATCAATATGACGATTGATTTCATTCTTTGCTAAGATGGTGTACATGATGTGTAACAAATATTTAAATTCTATTTGGGATCATTTTTGGACTGAATGCAACTCATAATTGCAGCTGAGGCCAAAGAAGAAAATCAAGTAGACTGCTGATCCTGAGAAGGCAATATGGTACCTGATATGTCACTTGATTCACTTGCTGGTAGACTGCTGATCCTGAGAAGGCAATATGGTTACCTGATATGTCACTTGATTCACTTGCTGTCTCGTAG

mRNA sequence

ATGCAGATCTTCGTCAAAACCCTAACGGGGAAGACCATTACGCTGGAAGTTGAGTCCAGCGACACTATTGACAATGTCAAGGCCAAGATCCAGGATAAGGAGGGTATTCCCCCCGACCAGCAACGGCTGATCTTTGCCGGAAAGCAGCTCGAGGATGGCCGCACTCTTGCTGACTACAACATCCAGAAAGAATCAACACTTCATCTGGTTCTAAGGCTTCGTGGTGGGATTATTGAGCCATCTTTGATGGCATTGGCCAGGAAATATAACCAGGACAAGATGATTTGCCGCAAATGTTATGCACGCCTGCATCCCCGTGCCGTCAACTGCCGGAAGAAGAAATGTGGACACAGCAATCAGACTGCTGATCCTGAGAAGGCAATATGGTTACCTGATATGTCACTTGATTCACTTGCTGTCTCGTAG

Coding sequence (CDS)

ATGCAGATCTTCGTCAAAACCCTAACGGGGAAGACCATTACGCTGGAAGTTGAGTCCAGCGACACTATTGACAATGTCAAGGCCAAGATCCAGGATAAGGAGGGTATTCCCCCCGACCAGCAACGGCTGATCTTTGCCGGAAAGCAGCTCGAGGATGGCCGCACTCTTGCTGACTACAACATCCAGAAAGAATCAACACTTCATCTGGTTCTAAGGCTTCGTGGTGGGATTATTGAGCCATCTTTGATGGCATTGGCCAGGAAATATAACCAGGACAAGATGATTTGCCGCAAATGTTATGCACGCCTGCATCCCCGTGCCGTCAACTGCCGGAAGAAGAAATGTGGACACAGCAATCAGACTGCTGATCCTGAGAAGGCAATATGGTTACCTGATATGTCACTTGATTCACTTGCTGTCTCGTAG

Protein sequence

MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGIIEPSLMALARKYNQDKMICRKCYARLHPRAVNCRKKKCGHSNQTADPEKAIWLPDMSLDSLAVS

Homology

[Close]

BLAST of Lcy05g020890 vs. ExPASy Swiss-Prot
Match: P49636 (Ubiquitin-60S ribosomal protein L40 OS=Nicotiana sylvestris OX=4096 GN=UBICEP52-7 PE=2 SV=2)

HSP 1 Score: 241.5 bits (615), Expect = 5.7e-63
Identity = 120/126 (95.24%), Postives = 122/126 (96.83%), Query Frame = 0


Query: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
           MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 61  IQKESTLHLVLRLRGGIIEPSLMALARKYNQDKMICRKCYARLHPRAVNCRKKKCGHSNQ 120
           IQKESTLHLVLRLRGGIIEPSLMALARKYNQDKMICRKCYARLHPRAVNCR+KKCGHSNQ
Sbjct: 61  IQKESTLHLVLRLRGGIIEPSLMALARKYNQDKMICRKCYARLHPRAVNCRRKKCGHSNQ 120

Query: 121 TADPEK 127
               +K
Sbjct: 121 LRPKKK 126

[Close]

BLAST of Lcy05g020890 vs. ExPASy Swiss-Prot
Match: B9DHA6 (Ubiquitin-60S ribosomal protein L40-1 OS=Arabidopsis thaliana OX=3702 GN=RPL40A PE=2 SV=1)

HSP 1 Score: 240.7 bits (613), Expect = 9.8e-63
Identity = 120/126 (95.24%), Postives = 121/126 (96.03%), Query Frame = 0


Query: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
           MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 61  IQKESTLHLVLRLRGGIIEPSLMALARKYNQDKMICRKCYARLHPRAVNCRKKKCGHSNQ 120
           IQKESTLHLVLRLRGGIIEPSLM LARKYNQDKMICRKCYARLHPRAVNCRKKKCGHSNQ
Sbjct: 61  IQKESTLHLVLRLRGGIIEPSLMMLARKYNQDKMICRKCYARLHPRAVNCRKKKCGHSNQ 120

Query: 121 TADPEK 127
               +K
Sbjct: 121 LRPKKK 126

[Close]

BLAST of Lcy05g020890 vs. ExPASy Swiss-Prot
Match: P0CH34 (Ubiquitin-60S ribosomal protein L40-1 OS=Oryza sativa subsp. japonica OX=39947 GN=Ub-CEP52-1 PE=2 SV=1)

HSP 1 Score: 240.7 bits (613), Expect = 9.8e-63
Identity = 120/126 (95.24%), Postives = 121/126 (96.03%), Query Frame = 0


Query: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
           MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 61  IQKESTLHLVLRLRGGIIEPSLMALARKYNQDKMICRKCYARLHPRAVNCRKKKCGHSNQ 120
           IQKESTLHLVLRLRGGIIEPSL ALARKYNQDKMICRKCYARLHPRAVNCRKKKCGHSNQ
Sbjct: 61  IQKESTLHLVLRLRGGIIEPSLQALARKYNQDKMICRKCYARLHPRAVNCRKKKCGHSNQ 120

Query: 121 TADPEK 127
               +K
Sbjct: 121 LRPKKK 126

[Close]

BLAST of Lcy05g020890 vs. ExPASy Swiss-Prot
Match: Q42202 (Ubiquitin-60S ribosomal protein L40-2 OS=Arabidopsis thaliana OX=3702 GN=RPL40B PE=2 SV=2)

HSP 1 Score: 240.7 bits (613), Expect = 9.8e-63
Identity = 120/126 (95.24%), Postives = 121/126 (96.03%), Query Frame = 0


Query: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
           MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 61  IQKESTLHLVLRLRGGIIEPSLMALARKYNQDKMICRKCYARLHPRAVNCRKKKCGHSNQ 120
           IQKESTLHLVLRLRGGIIEPSLM LARKYNQDKMICRKCYARLHPRAVNCRKKKCGHSNQ
Sbjct: 61  IQKESTLHLVLRLRGGIIEPSLMMLARKYNQDKMICRKCYARLHPRAVNCRKKKCGHSNQ 120

Query: 121 TADPEK 127
               +K
Sbjct: 121 LRPKKK 126

[Close]

BLAST of Lcy05g020890 vs. ExPASy Swiss-Prot
Match: P0CH35 (Ubiquitin-60S ribosomal protein L40-2 OS=Oryza sativa subsp. japonica OX=39947 GN=Ub-CEP52-2 PE=3 SV=1)

HSP 1 Score: 240.7 bits (613), Expect = 9.8e-63
Identity = 120/126 (95.24%), Postives = 121/126 (96.03%), Query Frame = 0


Query: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
           MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 61  IQKESTLHLVLRLRGGIIEPSLMALARKYNQDKMICRKCYARLHPRAVNCRKKKCGHSNQ 120
           IQKESTLHLVLRLRGGIIEPSL ALARKYNQDKMICRKCYARLHPRAVNCRKKKCGHSNQ
Sbjct: 61  IQKESTLHLVLRLRGGIIEPSLQALARKYNQDKMICRKCYARLHPRAVNCRKKKCGHSNQ 120

Query: 121 TADPEK 127
               +K
Sbjct: 121 LRPKKK 126

[Close]

BLAST of Lcy05g020890 vs. ExPASy TrEMBL
Match: A0A4Y1R2S3 (Ubiquitin (Fragment) OS=Prunus dulcis OX=3755 GN=Prudu_007823 PE=3 SV=1)

HSP 1 Score: 246.9 bits (629), Expect = 5.0e-62
Identity = 126/141 (89.36%), Postives = 131/141 (92.91%), Query Frame = 0


Query: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
           MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 17  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 76

Query: 61  IQKESTLHLVLRLRGGIIEPSLMALARKYNQDKMICRKCYARLHPRAVNCRKKKCGHSNQ 120
           IQKESTLHLVLRLRGGIIEPSLMALARKYNQDKMICRKCYARLHPRAVNCRKKKCGHSNQ
Sbjct: 77  IQKESTLHLVLRLRGGIIEPSLMALARKYNQDKMICRKCYARLHPRAVNCRKKKCGHSNQ 136

Query: 121 TADPEKAIWLPDMSLDSLAVS 142
              P+K + L  +S ++L  S
Sbjct: 137 LR-PKKKVKLLAVSFETLLAS 156

[Close]

BLAST of Lcy05g020890 vs. ExPASy TrEMBL
Match: A0A151UF79 (Ubiquitin OS=Cajanus cajan OX=3821 GN=KK1_043055 PE=3 SV=1)

HSP 1 Score: 243.8 bits (621), Expect = 4.3e-61
Identity = 121/126 (96.03%), Postives = 123/126 (97.62%), Query Frame = 0


Query: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
           MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 61  IQKESTLHLVLRLRGGIIEPSLMALARKYNQDKMICRKCYARLHPRAVNCRKKKCGHSNQ 120
           IQKESTLHLVLRLRGGIIEPSLMALARKYNQDKMICRKCYARLHPRAVNCRKKKCGHSNQ
Sbjct: 61  IQKESTLHLVLRLRGGIIEPSLMALARKYNQDKMICRKCYARLHPRAVNCRKKKCGHSNQ 120

Query: 121 TADPEK 127
             + E+
Sbjct: 121 EEEEEE 126

[Close]

BLAST of Lcy05g020890 vs. ExPASy TrEMBL
Match: A0A803L2X1 (Uncharacterized protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1)

HSP 1 Score: 243.8 bits (621), Expect = 4.3e-61
Identity = 121/132 (91.67%), Postives = 125/132 (94.70%), Query Frame = 0


Query: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
           MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 61  IQKESTLHLVLRLRGGIIEPSLMALARKYNQDKMICRKCYARLHPRAVNCRKKKCGHSNQ 120
           IQKESTLHLVLRLRGGIIEPSLMALARK+NQDKMICRKCYARLHPRAVNCRKKKCGHSNQ
Sbjct: 61  IQKESTLHLVLRLRGGIIEPSLMALARKFNQDKMICRKCYARLHPRAVNCRKKKCGHSNQ 120

Query: 121 TADPEKAIWLPD 133
            ++ +   W  D
Sbjct: 121 GSEDDGEEWGSD 132

[Close]

BLAST of Lcy05g020890 vs. ExPASy TrEMBL
Match: A0A4D8YPT6 (Ubiquitin OS=Salvia splendens OX=180675 GN=RP-L40e PE=3 SV=1)

HSP 1 Score: 243.8 bits (621), Expect = 4.3e-61
Identity = 121/126 (96.03%), Postives = 123/126 (97.62%), Query Frame = 0


Query: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
           MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 61  IQKESTLHLVLRLRGGIIEPSLMALARKYNQDKMICRKCYARLHPRAVNCRKKKCGHSNQ 120
           IQKESTLHLVLRLRGGIIEPSLMALARKYNQDKMICRKCYARLHPRAVNCRKKKCGHSNQ
Sbjct: 61  IQKESTLHLVLRLRGGIIEPSLMALARKYNQDKMICRKCYARLHPRAVNCRKKKCGHSNQ 120

Query: 121 TADPEK 127
             + E+
Sbjct: 121 VFEAEE 126

[Close]

BLAST of Lcy05g020890 vs. ExPASy TrEMBL
Match: A0A1U7X7W2 (Ubiquitin OS=Nicotiana sylvestris OX=4096 GN=LOC104233987 PE=3 SV=1)

HSP 1 Score: 242.7 bits (618), Expect = 9.5e-61
Identity = 121/126 (96.03%), Postives = 122/126 (96.83%), Query Frame = 0


Query: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
           MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 61  IQKESTLHLVLRLRGGIIEPSLMALARKYNQDKMICRKCYARLHPRAVNCRKKKCGHSNQ 120
           IQKESTLHLVLRLRGGIIEPSLMALARKYNQDKMICRKCYARLHPRAVNCRKKKCGHSNQ
Sbjct: 61  IQKESTLHLVLRLRGGIIEPSLMALARKYNQDKMICRKCYARLHPRAVNCRKKKCGHSNQ 120

Query: 121 TADPEK 127
               +K
Sbjct: 121 LRPKKK 126

[Close]

BLAST of Lcy05g020890 vs. NCBI nr
Match: BBG98420.1 (ubiquitin extension protein 1, partial [Prunus dulcis])

HSP 1 Score: 246.9 bits (629), Expect = 1.0e-61
Identity = 126/141 (89.36%), Postives = 131/141 (92.91%), Query Frame = 0


Query: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
           MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 17  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 76

Query: 61  IQKESTLHLVLRLRGGIIEPSLMALARKYNQDKMICRKCYARLHPRAVNCRKKKCGHSNQ 120
           IQKESTLHLVLRLRGGIIEPSLMALARKYNQDKMICRKCYARLHPRAVNCRKKKCGHSNQ
Sbjct: 77  IQKESTLHLVLRLRGGIIEPSLMALARKYNQDKMICRKCYARLHPRAVNCRKKKCGHSNQ 136

Query: 121 TADPEKAIWLPDMSLDSLAVS 142
              P+K + L  +S ++L  S
Sbjct: 137 LR-PKKKVKLLAVSFETLLAS 156

[Close]

BLAST of Lcy05g020890 vs. NCBI nr
Match: CAF2095246.1 (unnamed protein product [Brassica napus])

HSP 1 Score: 243.8 bits (621), Expect = 8.8e-61
Identity = 123/136 (90.44%), Postives = 126/136 (92.65%), Query Frame = 0


Query: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
           MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 61  IQKESTLHLVLRLRGGIIEPSLMALARKYNQDKMICRKCYARLHPRAVNCRKKKCGHSNQ 120
           IQKESTLHLVLRLRGGIIEPSLMALARKYNQDKMICRKCYARLHPRAVNCRKKKCGHSNQ
Sbjct: 61  IQKESTLHLVLRLRGGIIEPSLMALARKYNQDKMICRKCYARLHPRAVNCRKKKCGHSNQ 120

Query: 121 TADPEKAIWLPDMSLD 137
               +K   L  + L+
Sbjct: 121 LRPKKKIKHLASVFLE 136

[Close]

BLAST of Lcy05g020890 vs. NCBI nr
Match: KYP77965.1 (Ubiquitin [Cajanus cajan])

HSP 1 Score: 243.8 bits (621), Expect = 8.8e-61
Identity = 121/126 (96.03%), Postives = 123/126 (97.62%), Query Frame = 0


Query: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
           MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 61  IQKESTLHLVLRLRGGIIEPSLMALARKYNQDKMICRKCYARLHPRAVNCRKKKCGHSNQ 120
           IQKESTLHLVLRLRGGIIEPSLMALARKYNQDKMICRKCYARLHPRAVNCRKKKCGHSNQ
Sbjct: 61  IQKESTLHLVLRLRGGIIEPSLMALARKYNQDKMICRKCYARLHPRAVNCRKKKCGHSNQ 120

Query: 121 TADPEK 127
             + E+
Sbjct: 121 EEEEEE 126

[Close]

BLAST of Lcy05g020890 vs. NCBI nr
Match: NP_001295699.1 (ubiquitin-60S ribosomal protein L40-like [Jatropha curcas] >XP_002530306.1 ubiquitin-60S ribosomal protein L40 [Ricinus communis] >XP_002530340.1 ubiquitin-60S ribosomal protein L40 [Ricinus communis] >XP_003523336.1 ubiquitin-60S ribosomal protein L40 [Glycine max] >XP_003526741.1 ubiquitin-60S ribosomal protein L40 [Glycine max] >XP_003554448.1 ubiquitin-60S ribosomal protein L40 [Glycine max] >XP_004137208.1 ubiquitin-60S ribosomal protein L40 [Cucumis sativus] >XP_004145956.1 ubiquitin-60S ribosomal protein L40 isoform X1 [Cucumis sativus] >XP_006295234.1 ubiquitin-60S ribosomal protein L40 [Capsella rubella] >XP_006403788.1 ubiquitin-60S ribosomal protein L40 [Eutrema salsugineum] >XP_006410789.1 ubiquitin-60S ribosomal protein L40 [Eutrema salsugineum] >XP_006430158.1 ubiquitin-60S ribosomal protein L40 [Citrus clementina] >XP_006441206.1 ubiquitin-60S ribosomal protein L40 [Citrus clementina] >XP_006481744.1 ubiquitin-60S ribosomal protein L40 [Citrus sinensis] >XP_006493171.1 ubiquitin-60S ribosomal protein L40 [Citrus sinensis] >XP_007162922.1 hypothetical protein PHAVU_001G191700g [Phaseolus vulgaris] >XP_008437646.1 PREDICTED: ubiquitin-60S ribosomal protein L40 [Cucumis melo] >XP_008778063.1 ubiquitin-60S ribosomal protein L40 [Phoenix dactylifera] >XP_008788944.1 ubiquitin-60S ribosomal protein L40 [Phoenix dactylifera] >XP_008806099.1 ubiquitin-60S ribosomal protein L40 [Phoenix dactylifera] >XP_009115957.1 ubiquitin-60S ribosomal protein L40 [Brassica rapa] >XP_009133066.1 ubiquitin-60S ribosomal protein L40 [Brassica rapa] >XP_009143610.2 ubiquitin-60S ribosomal protein L40 [Brassica rapa] >XP_009143611.2 ubiquitin-60S ribosomal protein L40 [Brassica rapa] >XP_009591639.1 ubiquitin-60S ribosomal protein L40 [Nicotiana tomentosiformis] >XP_009611807.1 ubiquitin-60S ribosomal protein L40 [Nicotiana tomentosiformis] >XP_009782560.1 PREDICTED: ubiquitin-60S ribosomal protein L40 [Nicotiana sylvestris] >XP_009785771.1 PREDICTED: ubiquitin-60S ribosomal protein L40 [Nicotiana sylvestris] >XP_009796884.1 PREDICTED: ubiquitin-60S ribosomal protein L40 [Nicotiana sylvestris] >XP_010048686.1 ubiquitin-60S ribosomal protein L40 [Eucalyptus grandis] >XP_010090891.1 ubiquitin-60S ribosomal protein L40 [Morus notabilis] >XP_010245724.1 PREDICTED: ubiquitin-60S ribosomal protein L40 [Nelumbo nucifera] >XP_010271616.2 PREDICTED: ubiquitin-60S ribosomal protein L40 [Nelumbo nucifera] >XP_010509505.1 PREDICTED: ubiquitin-60S ribosomal protein L40 [Camelina sativa] >XP_010516825.1 PREDICTED: ubiquitin-60S ribosomal protein L40 [Camelina sativa] >XP_010527444.1 PREDICTED: ubiquitin-60S ribosomal protein L40 [Tarenaya hassleriana] >XP_010543797.1 PREDICTED: ubiquitin-60S ribosomal protein L40 [Tarenaya hassleriana] >XP_010553389.1 PREDICTED: ubiquitin-60S ribosomal protein L40 [Tarenaya hassleriana] >XP_010558020.1 PREDICTED: ubiquitin-60S ribosomal protein L40 [Tarenaya hassleriana] >XP_010654111.1 PREDICTED: ubiquitin-60S ribosomal protein L40 [Vitis vinifera] >XP_010931116.1 ubiquitin-60S ribosomal protein L40 [Elaeis guineensis] >XP_010943781.1 ubiquitin-60S ribosomal protein L40 [Elaeis guineensis] >XP_010943822.1 ubiquitin-60S ribosomal protein L40 [Elaeis guineensis] >XP_011075913.1 ubiquitin-60S ribosomal protein L40 [Sesamum indicum] >XP_011094277.1 ubiquitin-60S ribosomal protein L40 [Sesamum indicum] >XP_011625942.1 ubiquitin-60S ribosomal protein L40 [Amborella trichopoda] >XP_011653323.1 ubiquitin-60S ribosomal protein L40 [Cucumis sativus] >XP_012072999.1 ubiquitin-60S ribosomal protein L40 [Jatropha curcas] >XP_012435088.1 PREDICTED: ubiquitin-60S ribosomal protein L40 isoform X1 [Gossypium raimondii] >XP_012439954.1 PREDICTED: ubiquitin-60S ribosomal protein L40 [Gossypium raimondii] >XP_012485785.1 PREDICTED: ubiquitin-60S ribosomal protein L40 [Gossypium raimondii] >XP_012485786.1 PREDICTED: ubiquitin-60S ribosomal protein L40 [Gossypium raimondii] >XP_012488621.1 PREDICTED: ubiquitin-60S ribosomal protein L40 [Gossypium raimondii] >XP_013602260.1 PREDICTED: ubiquitin-60S ribosomal protein L40 [Brassica oleracea var. oleracea] >XP_013625956.1 PREDICTED: ubiquitin-60S ribosomal protein L40 [Brassica oleracea var. oleracea] >XP_013634027.1 PREDICTED: ubiquitin-60S ribosomal protein L40 [Brassica oleracea var. oleracea] >XP_013634862.1 PREDICTED: ubiquitin-60S ribosomal protein L40 [Brassica oleracea var. oleracea] >XP_013663132.1 ubiquitin-60S ribosomal protein L40 [Brassica napus] >XP_013663268.1 ubiquitin-60S ribosomal protein L40 [Brassica napus] >XP_013683587.1 ubiquitin-60S ribosomal protein L40 [Brassica napus] >XP_013686654.1 ubiquitin-60S ribosomal protein L40 [Brassica napus] >XP_013687374.1 ubiquitin-60S ribosomal protein L40 [Brassica napus] >XP_013687804.1 ubiquitin-60S ribosomal protein L40 isoform X1 [Brassica napus] >XP_013692353.1 ubiquitin-60S ribosomal protein L40 [Brassica napus] >XP_013742139.1 ubiquitin-60S ribosomal protein L40 [Brassica napus] >XP_013748454.1 ubiquitin-60S ribosomal protein L40 [Brassica napus] >XP_013748455.1 ubiquitin-60S ribosomal protein L40 [Brassica napus] >XP_014495259.1 ubiquitin-60S ribosomal protein L40 [Vigna radiata var. radiata] >XP_015944658.1 ubiquitin-60S ribosomal protein L40 [Arachis duranensis] >XP_015950575.1 ubiquitin-60S ribosomal protein L40 [Arachis duranensis] >XP_016179671.1 ubiquitin-60S ribosomal protein L40 [Arachis ipaensis] >XP_016184091.1 ubiquitin-60S ribosomal protein L40 [Arachis ipaensis] >XP_016442439.1 PREDICTED: ubiquitin-60S ribosomal protein L40 [Nicotiana tabacum] >XP_016444799.1 PREDICTED: ubiquitin-60S ribosomal protein L40 [Nicotiana tabacum] >XP_016468352.1 PREDICTED: ubiquitin-60S ribosomal protein L40 [Nicotiana tabacum] >XP_016478166.1 PREDICTED: ubiquitin-60S ribosomal protein L40 [Nicotiana tabacum] >XP_016500340.1 PREDICTED: ubiquitin-60S ribosomal protein L40 [Nicotiana tabacum] >XP_016538254.1 PREDICTED: ubiquitin-60S ribosomal protein L40 [Capsicum annuum] >XP_016564296.1 PREDICTED: ubiquitin-60S ribosomal protein L40 [Capsicum annuum] >XP_016565183.1 PREDICTED: ubiquitin-60S ribosomal protein L40 [Capsicum annuum] >XP_016676984.1 ubiquitin-60S ribosomal protein L40 [Gossypium hirsutum] >XP_016686452.2 ubiquitin-60S ribosomal protein L40 [Gossypium hirsutum] >XP_016691410.1 ubiquitin-60S ribosomal protein L40 [Gossypium hirsutum] >XP_016708706.1 ubiquitin-60S ribosomal protein L40 [Gossypium hirsutum] >XP_016716423.2 ubiquitin-60S ribosomal protein L40 [Gossypium hirsutum] >XP_016716792.1 ubiquitin-60S ribosomal protein L40 [Gossypium hirsutum] >XP_016737263.1 ubiquitin-60S ribosomal protein L40 [Gossypium hirsutum] >XP_016742332.2 ubiquitin-60S ribosomal protein L40 [Gossypium hirsutum] >XP_017417309.1 PREDICTED: ubiquitin-60S ribosomal protein L40 [Vigna angularis] >XP_017608430.1 PREDICTED: ubiquitin-60S ribosomal protein L40 [Gossypium arboreum] >XP_017608582.1 PREDICTED: ubiquitin-60S ribosomal protein L40 [Gossypium arboreum] >XP_017608650.1 PREDICTED: ubiquitin-60S ribosomal protein L40 [Gossypium arboreum] >XP_017973265.1 PREDICTED: ubiquitin-60S ribosomal protein L40 [Theobroma cacao] >XP_017977940.1 PREDICTED: ubiquitin-60S ribosomal protein L40 [Theobroma cacao] >XP_018436908.1 PREDICTED: ubiquitin-60S ribosomal protein L40 [Raphanus sativus] >XP_018441409.1 PREDICTED: ubiquitin-60S ribosomal protein L40 [Raphanus sativus] >XP_018463246.1 PREDICTED: ubiquitin-60S ribosomal protein L40 [Raphanus sativus] >XP_018474609.1 PREDICTED: ubiquitin-60S ribosomal protein L40 [Raphanus sativus] >XP_018478513.1 PREDICTED: ubiquitin-60S ribosomal protein L40 [Raphanus sativus] >XP_019160578.1 PREDICTED: ubiquitin-60S ribosomal protein L40 [Ipomoea nil] >XP_019170259.1 PREDICTED: ubiquitin-60S ribosomal protein L40 [Ipomoea nil] >XP_019195614.1 PREDICTED: ubiquitin-60S ribosomal protein L40 [Ipomoea nil] >XP_019200164.1 PREDICTED: ubiquitin-60S ribosomal protein L40 [Ipomoea nil] >XP_019200323.1 PREDICTED: ubiquitin-60S ribosomal protein L40 [Ipomoea nil] >XP_019226424.1 PREDICTED: ubiquitin-60S ribosomal protein L40 [Nicotiana attenuata] >XP_019232296.1 PREDICTED: ubiquitin-60S ribosomal protein L40 [Nicotiana attenuata] >XP_019232408.1 PREDICTED: ubiquitin-60S ribosomal protein L40 [Nicotiana attenuata] >XP_019235878.1 PREDICTED: ubiquitin-60S ribosomal protein L40 [Nicotiana attenuata] >XP_019239433.1 PREDICTED: ubiquitin-60S ribosomal protein L40 [Nicotiana attenuata] >XP_020089777.1 ubiquitin-60S ribosomal protein L40 [Ananas comosus] >XP_020110117.1 ubiquitin-60S ribosomal protein L40 [Ananas comosus] >XP_020205964.1 ubiquitin-60S ribosomal protein L40 [Cajanus cajan] >XP_020245614.1 ubiquitin-60S ribosomal protein L40 [Asparagus officinalis] >XP_020248182.1 ubiquitin-60S ribosomal protein L40 [Asparagus officinalis] >XP_020260382.1 ubiquitin-60S ribosomal protein L40 [Asparagus officinalis] >XP_020672295.1 ubiquitin-60S ribosomal protein L40 [Dendrobium catenatum] >XP_021278732.1 ubiquitin-60S ribosomal protein L40 [Herrania umbratica] >XP_021289311.1 ubiquitin-60S ribosomal protein L40 [Herrania umbratica] >XP_021614880.1 ubiquitin-60S ribosomal protein L40 [Manihot esculenta] >XP_021621360.1 ubiquitin-60S ribosomal protein L40 [Manihot esculenta] >XP_021623225.1 ubiquitin-60S ribosomal protein L40 [Manihot esculenta] >XP_021634207.1 ubiquitin-60S ribosomal protein L40 [Manihot esculenta] >XP_021661480.1 ubiquitin-60S ribosomal protein L40 isoform X1 [Hevea brasiliensis] >XP_021661481.1 ubiquitin-60S ribosomal protein L40 isoform X2 [Hevea brasiliensis] >XP_021663687.1 ubiquitin-60S ribosomal protein L40 [Hevea brasiliensis] >XP_021663688.1 ubiquitin-60S ribosomal protein L40 [Hevea brasiliensis] >XP_021685673.1 ubiquitin-60S ribosomal protein L40 [Hevea brasiliensis] >XP_021892462.1 ubiquitin-60S ribosomal protein L40 [Carica papaya] >XP_021909502.1 ubiquitin-60S ribosomal protein L40 [Carica papaya] >XP_022138179.1 ubiquitin-60S ribosomal protein L40 [Momordica charantia] >XP_022141071.1 ubiquitin-60S ribosomal protein L40 [Momordica charantia] >XP_022149439.1 ubiquitin-60S ribosomal protein L40 [Momordica charantia] >XP_022557153.1 ubiquitin-60S ribosomal protein L40 isoform X2 [Brassica napus] >XP_022574934.1 ubiquitin-60S ribosomal protein L40 [Brassica napus] >XP_022723001.1 ubiquitin-60S ribosomal protein L40 [Durio zibethinus] >XP_022737643.1 ubiquitin-60S ribosomal protein L40 [Durio zibethinus] >XP_022737644.1 ubiquitin-60S ribosomal protein L40 [Durio zibethinus] >XP_022742260.1 ubiquitin-60S ribosomal protein L40 [Durio zibethinus] >XP_022767047.1 ubiquitin-60S ribosomal protein L40 [Durio zibethinus] >XP_022858992.1 ubiquitin-60S ribosomal protein L40 [Olea europaea var. sylvestris] >XP_022860871.1 ubiquitin-60S ribosomal protein L40 [Olea europaea var. sylvestris] >XP_022865905.1 ubiquitin-60S ribosomal protein L40 [Olea europaea var. sylvestris] >XP_022898420.1 ubiquitin-60S ribosomal protein L40 [Olea europaea var. sylvestris] >XP_022923084.1 ubiquitin-60S ribosomal protein L40 [Cucurbita moschata] >XP_022945964.1 ubiquitin-60S ribosomal protein L40 [Cucurbita moschata] >XP_022958297.1 ubiquitin-60S ribosomal protein L40 [Cucurbita moschata] >XP_022968473.1 ubiquitin-60S ribosomal protein L40 [Cucurbita maxima] >XP_022984934.1 ubiquitin-60S ribosomal protein L40 [Cucurbita maxima] >XP_022995584.1 ubiquitin-60S ribosomal protein L40 [Cucurbita maxima] >XP_023532590.1 ubiquitin-60S ribosomal protein L40 [Cucurbita pepo subsp. pepo] >XP_023541563.1 ubiquitin-60S ribosomal protein L40 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023541564.1 ubiquitin-60S ribosomal protein L40 isoform X2 [Cucurbita pepo subsp. pepo] >XP_023552576.1 ubiquitin-60S ribosomal protein L40 [Cucurbita pepo subsp. pepo] >XP_023885969.1 ubiquitin-60S ribosomal protein L40 [Quercus suber] >XP_025623237.1 ubiquitin-60S ribosomal protein L40 [Arachis hypogaea] >XP_025633982.1 ubiquitin-60S ribosomal protein L40 [Arachis hypogaea] >XP_025656719.1 ubiquitin-60S ribosomal protein L40 [Arachis hypogaea] >XP_025680539.1 ubiquitin-60S ribosomal protein L40 [Arachis hypogaea] >XP_026402016.1 ubiquitin-60S ribosomal protein L40 [Papaver somniferum] >XP_026406132.1 ubiquitin-60S ribosomal protein L40 [Papaver somniferum] >XP_026412261.1 ubiquitin-60S ribosomal protein L40 [Papaver somniferum] >XP_026427136.1 ubiquitin-60S ribosomal protein L40 [Papaver somniferum] >XP_026439509.1 ubiquitin-60S ribosomal protein L40 [Papaver somniferum] >XP_026441154.1 ubiquitin-60S ribosomal protein L40 [Papaver somniferum] >XP_027081948.1 ubiquitin-60S ribosomal protein L40 [Coffea arabica] >XP_027108557.1 ubiquitin-60S ribosomal protein L40 [Coffea arabica] >XP_027115522.1 ubiquitin-60S ribosomal protein L40 [Coffea arabica] >XP_027159909.1 ubiquitin-60S ribosomal protein L40 [Coffea eugenioides] >XP_027182658.1 ubiquitin-60S ribosomal protein L40 [Coffea eugenioides] >XP_027349330.1 ubiquitin-60S ribosomal protein L40 [Abrus precatorius] >XP_027930693.1 ubiquitin-60S ribosomal protein L40 [Vigna unguiculata] >XP_028063936.1 ubiquitin-60S ribosomal protein L40 [Camellia sinensis] >XP_028068769.1 ubiquitin-60S ribosomal protein L40 [Camellia sinensis] >XP_028094280.1 ubiquitin-60S ribosomal protein L40 [Camellia sinensis] >XP_028216192.1 ubiquitin-60S ribosomal protein L40 [Glycine soja] >XP_028226054.1 ubiquitin-60S ribosomal protein L40 [Glycine soja] >XP_028229911.1 ubiquitin-60S ribosomal protein L40 [Glycine soja] >XP_028236176.1 ubiquitin-60S ribosomal protein L40 [Glycine soja] >XP_028790805.1 ubiquitin-60S ribosomal protein L40 [Prosopis alba] >XP_028806682.1 ubiquitin-60S ribosomal protein L40 [Prosopis alba] >XP_030475114.1 ubiquitin-60S ribosomal protein L40 [Syzygium oleosum] >XP_030531770.1 ubiquitin-60S ribosomal protein L40 [Rhodamnia argentea] >XP_030532268.1 ubiquitin-60S ribosomal protein L40 [Rhodamnia argentea] >XP_030549079.1 ubiquitin-60S ribosomal protein L40 [Rhodamnia argentea] >XP_030927898.1 ubiquitin-60S ribosomal protein L40 isoform X1 [Quercus lobata] >XP_031095207.1 ubiquitin-60S ribosomal protein L40 [Ipomoea triloba] >XP_031116059.1 ubiquitin-60S ribosomal protein L40 isoform X1 [Ipomoea triloba] >XP_031123949.1 ubiquitin-60S ribosomal protein L40 isoform X1 [Ipomoea triloba] >XP_031123950.1 ubiquitin-60S ribosomal protein L40 isoform X2 [Ipomoea triloba] >XP_031129726.1 ubiquitin-60S ribosomal protein L40 [Ipomoea triloba] >XP_031258458.1 ubiquitin-60S ribosomal protein L40 [Pistacia vera] >XP_031258459.1 ubiquitin-60S ribosomal protein L40 [Pistacia vera] >XP_031264510.1 ubiquitin-60S ribosomal protein L40 isoform X1 [Pistacia vera] >XP_031264511.1 ubiquitin-60S ribosomal protein L40 isoform X2 [Pistacia vera] >XP_031381529.1 ubiquitin-60S ribosomal protein L40 [Punica granatum] >XP_031392538.1 ubiquitin-60S ribosomal protein L40 [Punica granatum] >XP_033143083.1 ubiquitin-60S ribosomal protein L40 [Brassica rapa] >XP_033143084.1 ubiquitin-60S ribosomal protein L40 [Brassica rapa] >XP_034693022.1 ubiquitin-60S ribosomal protein L40 [Vitis riparia] >XP_038900066.1 ubiquitin-60S ribosomal protein L40 [Benincasa hispida] >XP_038906465.1 ubiquitin-60S ribosomal protein L40 [Benincasa hispida] >XP_039026481.1 ubiquitin-60S ribosomal protein L40 [Hibiscus syriacus] >XP_039030630.1 ubiquitin-60S ribosomal protein L40 [Hibiscus syriacus] >XP_039042194.1 ubiquitin-60S ribosomal protein L40 [Hibiscus syriacus] >XP_039042762.1 ubiquitin-60S ribosomal protein L40 [Hibiscus syriacus] >XP_039065210.1 ubiquitin-60S ribosomal protein L40 [Hibiscus syriacus] >XP_039122832.1 ubiquitin-60S ribosomal protein L40 [Dioscorea cayenensis subsp. rotundata] >XP_039139157.1 ubiquitin-60S ribosomal protein L40 [Dioscorea cayenensis subsp. rotundata] >XP_039160713.1 ubiquitin-60S ribosomal protein L40 [Eucalyptus grandis] >XP_041996294.1 ubiquitin-60S ribosomal protein L40 [Salvia splendens] >XP_042000823.1 ubiquitin-60S ribosomal protein L40 [Salvia splendens] >XP_042031747.1 ubiquitin-60S ribosomal protein L40 [Salvia splendens] >XP_042035643.1 ubiquitin-60S ribosomal protein L40 [Salvia splendens] >XP_042049750.1 ubiquitin-60S ribosomal protein L40 [Salvia splendens] >XP_042054020.1 ubiquitin-60S ribosomal protein L40 [Salvia splendens] >XP_042063933.1 ubiquitin-60S ribosomal protein L40 [Salvia splendens] >XP_042479471.1 ubiquitin-60S ribosomal protein L40 [Macadamia integrifolia] >XP_042510504.1 ubiquitin-60S ribosomal protein L40 [Macadamia integrifolia] >ABR17437.1 unknown [Picea sitchensis] >AFK46422.1 unknown [Lotus japonicus] >EHA8588062.1 Ubiquitin-60S ribosomal protein L40 [Cocos nucifera] >KAA0042525.1 Ubiquitin supergroup,Ribosomal protein L40e [Cucumis melo var. makuwa] >KAA8516211.1 hypothetical protein F0562_019390 [Nyssa sinensis] >KAB1205143.1 Ubiquitin-60S ribosomal protein L40 [Morella rubra] >KAB2001047.1 hypothetical protein ES319_D12G273700v1 [Gossypium barbadense] >KAF3432761.1 hypothetical protein FNV43_RR23863 [Rhamnella rubrinervis] >KAF3970551.1 hypothetical protein CMV_005774 [Castanea mollissima] >KAF5207061.1 Ubiquitin-60s ribosomal protein l40 [Thalictrum thalictroides] >KAF7818806.1 ubiquitin-60S ribosomal protein L40 [Senna tora] >KAF8008375.1 hypothetical protein BT93_K2142 [Corymbia citriodora subsp. variegata] >KAF8050658.1 hypothetical protein N665_1911s0003 [Sinapis alba] >KAF9602286.1 hypothetical protein IFM89_026403 [Coptis chinensis] >KAG2257804.1 hypothetical protein Bca52824_077098 [Brassica carinata] >KAG5538189.1 hypothetical protein RHGRI_018941 [Rhododendron griersonianum] >KAG6574261.1 Ubiquitin-60S ribosomal protein L40, partial [Cucurbita argyrosperma subsp. sororia] >KAG8476387.1 hypothetical protein CXB51_033256 [Gossypium anomalum] >KAG9143443.1 hypothetical protein Leryth_025136 [Lithospermum erythrorhizon] >KAG9452593.1 hypothetical protein H6P81_005497 [Aristolochia fimbriata] >KZV41671.1 hypothetical protein F511_21448 [Dorcoceras hygrometricum] >OMO68412.1 Ubiquitin [Corchorus olitorius] >OVA04757.1 Ubiquitin domain [Macleaya cordata] >PHT45062.1 Ubiquitin-60S ribosomal protein L40-2 [Capsicum baccatum] >PHU09763.1 Ubiquitin-60S ribosomal protein L40-2 [Capsicum chinense] >PIA34852.1 hypothetical protein AQUCO_03700255v1 [Aquilegia coerulea] >PIN04012.1 Ubiquitin/60s ribosomal protein L40 fusion [Handroanthus impetiginosus] >PSS15910.1 60S ribosomal protein L40 precursor [Actinidia chinensis var. chinensis] >RWR87657.1 ubiquitin-60S ribosomal protein L40-like protein [Cinnamomum micranthum f. kanehirae] >TXG48546.1 hypothetical protein EZV62_024421 [Acer yangbiense] >TYG42839.1 hypothetical protein ES288_D12G289100v1 [Gossypium darwinii] >TYH41058.1 hypothetical protein ES332_D12G290500v1 [Gossypium tomentosum] >TYI52888.1 hypothetical protein E1A91_D12G280200v1 [Gossypium mustelinum] >CAA2935711.1 ubiquitin-60S ribosomal L40 [Olea europaea subsp. europaea] >CAD1818045.1 unnamed protein product [Ananas comosus var. bracteatus] >CDP08635.1 unnamed protein product [Coffea canephora] >VDC89226.1 unnamed protein product [Brassica oleracea] >VVA97243.1 unnamed protein product [Arabis nemorensis] >BAT85883.1 hypothetical protein VIGAN_04348100 [Vigna angularis var. angularis] >GFP88772.1 ubiquitin-60S ribosomal protein l40 [Phtheirospermum japonicum] >GFY90187.1 ubiquitin extension protein 1 [Actinidia rufa])

HSP 1 Score: 242.7 bits (618), Expect = 2.0e-60
Identity = 121/126 (96.03%), Postives = 122/126 (96.83%), Query Frame = 0


Query: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
           MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 61  IQKESTLHLVLRLRGGIIEPSLMALARKYNQDKMICRKCYARLHPRAVNCRKKKCGHSNQ 120
           IQKESTLHLVLRLRGGIIEPSLMALARKYNQDKMICRKCYARLHPRAVNCRKKKCGHSNQ
Sbjct: 61  IQKESTLHLVLRLRGGIIEPSLMALARKYNQDKMICRKCYARLHPRAVNCRKKKCGHSNQ 120

Query: 121 TADPEK 127
               +K
Sbjct: 121 LRPKKK 126

[Close]

BLAST of Lcy05g020890 vs. NCBI nr
Match: EOY23660.1 (Ubiquitin supergroup,Ribosomal protein L40e [Theobroma cacao])

HSP 1 Score: 242.7 bits (618), Expect = 2.0e-60
Identity = 121/126 (96.03%), Postives = 122/126 (96.83%), Query Frame = 0


Query: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
           MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 24  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 83

Query: 61  IQKESTLHLVLRLRGGIIEPSLMALARKYNQDKMICRKCYARLHPRAVNCRKKKCGHSNQ 120
           IQKESTLHLVLRLRGGIIEPSLMALARKYNQDKMICRKCYARLHPRAVNCRKKKCGHSNQ
Sbjct: 84  IQKESTLHLVLRLRGGIIEPSLMALARKYNQDKMICRKCYARLHPRAVNCRKKKCGHSNQ 143

Query: 121 TADPEK 127
               +K
Sbjct: 144 LRPKKK 149

[Close]

BLAST of Lcy05g020890 vs. TAIR 10
Match: AT2G36170.1 (Ubiquitin supergroup;Ribosomal protein L40e )

HSP 1 Score: 240.7 bits (613), Expect = 6.9e-64
Identity = 120/126 (95.24%), Postives = 121/126 (96.03%), Query Frame = 0


Query: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
           MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 61  IQKESTLHLVLRLRGGIIEPSLMALARKYNQDKMICRKCYARLHPRAVNCRKKKCGHSNQ 120
           IQKESTLHLVLRLRGGIIEPSLM LARKYNQDKMICRKCYARLHPRAVNCRKKKCGHSNQ
Sbjct: 61  IQKESTLHLVLRLRGGIIEPSLMMLARKYNQDKMICRKCYARLHPRAVNCRKKKCGHSNQ 120

Query: 121 TADPEK 127
               +K
Sbjct: 121 LRPKKK 126

[Close]

BLAST of Lcy05g020890 vs. TAIR 10
Match: AT3G52590.1 (ubiquitin extension protein 1 )

HSP 1 Score: 240.7 bits (613), Expect = 6.9e-64
Identity = 120/126 (95.24%), Postives = 121/126 (96.03%), Query Frame = 0


Query: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
           MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 61  IQKESTLHLVLRLRGGIIEPSLMALARKYNQDKMICRKCYARLHPRAVNCRKKKCGHSNQ 120
           IQKESTLHLVLRLRGGIIEPSLM LARKYNQDKMICRKCYARLHPRAVNCRKKKCGHSNQ
Sbjct: 61  IQKESTLHLVLRLRGGIIEPSLMMLARKYNQDKMICRKCYARLHPRAVNCRKKKCGHSNQ 120

Query: 121 TADPEK 127
               +K
Sbjct: 121 LRPKKK 126

[Close]

BLAST of Lcy05g020890 vs. TAIR 10
Match: AT1G65350.1 (ubiquitin 13 )

HSP 1 Score: 150.2 bits (378), Expect = 1.2e-36
Identity = 76/77 (98.70%), Postives = 77/77 (100.00%), Query Frame = 0


Query: 1  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
          MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 1  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 61 IQKESTLHLVLRLRGGI 78
          IQKESTLHLVLRLRGG+
Sbjct: 61 IQKESTLHLVLRLRGGM 77

[Close]

BLAST of Lcy05g020890 vs. TAIR 10
Match: AT4G05320.2 (polyubiquitin 10 )

HSP 1 Score: 150.2 bits (378), Expect = 1.2e-36
Identity = 76/77 (98.70%), Postives = 77/77 (100.00%), Query Frame = 0


Query: 1  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
          MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 1  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 61 IQKESTLHLVLRLRGGI 78
          IQKESTLHLVLRLRGG+
Sbjct: 61 IQKESTLHLVLRLRGGM 77

[Close]

BLAST of Lcy05g020890 vs. TAIR 10
Match: AT4G02890.1 (Ubiquitin family protein )

HSP 1 Score: 150.2 bits (378), Expect = 1.2e-36
Identity = 76/77 (98.70%), Postives = 77/77 (100.00%), Query Frame = 0


Query: 1  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
          MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 1  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 61 IQKESTLHLVLRLRGGI 78
          IQKESTLHLVLRLRGG+
Sbjct: 61 IQKESTLHLVLRLRGGM 77

The following BLAST results are available for this feature:

BLAST of Lcy05g020890 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P49636	5.7e-63	95.24	Ubiquitin-60S ribosomal protein L40 OS=Nicotiana sylvestris OX=4096 GN=UBICEP52-...	[more]
B9DHA6	9.8e-63	95.24	Ubiquitin-60S ribosomal protein L40-1 OS=Arabidopsis thaliana OX=3702 GN=RPL40A ...	[more]
P0CH34	9.8e-63	95.24	Ubiquitin-60S ribosomal protein L40-1 OS=Oryza sativa subsp. japonica OX=39947 G...	[more]
Q42202	9.8e-63	95.24	Ubiquitin-60S ribosomal protein L40-2 OS=Arabidopsis thaliana OX=3702 GN=RPL40B ...	[more]
P0CH35	9.8e-63	95.24	Ubiquitin-60S ribosomal protein L40-2 OS=Oryza sativa subsp. japonica OX=39947 G...	[more]

BLAST of Lcy05g020890 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A4Y1R2S3	5.0e-62	89.36	Ubiquitin (Fragment) OS=Prunus dulcis OX=3755 GN=Prudu_007823 PE=3 SV=1	[more]
A0A151UF79	4.3e-61	96.03	Ubiquitin OS=Cajanus cajan OX=3821 GN=KK1_043055 PE=3 SV=1	[more]
A0A803L2X1	4.3e-61	91.67	Uncharacterized protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1	[more]
A0A4D8YPT6	4.3e-61	96.03	Ubiquitin OS=Salvia splendens OX=180675 GN=RP-L40e PE=3 SV=1	[more]
A0A1U7X7W2	9.5e-61	96.03	Ubiquitin OS=Nicotiana sylvestris OX=4096 GN=LOC104233987 PE=3 SV=1	[more]

BLAST of Lcy05g020890 vs. NCBI nr


Match Name	E-value	Identity	Description
BBG98420.1	1.0e-61	89.36	ubiquitin extension protein 1, partial [Prunus dulcis]	[more]
CAF2095246.1	8.8e-61	90.44	unnamed protein product [Brassica napus]	[more]
KYP77965.1	8.8e-61	96.03	Ubiquitin [Cajanus cajan]	[more]
NP_001295699.1	2.0e-60	96.03	ubiquitin-60S ribosomal protein L40-like [Jatropha curcas] >XP_002530306.1 ubiqu...	[more]
EOY23660.1	2.0e-60	96.03	Ubiquitin supergroup,Ribosomal protein L40e [Theobroma cacao]	[more]

BLAST of Lcy05g020890 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G36170.1	6.9e-64	95.24	Ubiquitin supergroup;Ribosomal protein L40e	[more]
AT3G52590.1	6.9e-64	95.24	ubiquitin extension protein 1	[more]
AT1G65350.1	1.2e-36	98.70	ubiquitin 13	[more]
AT4G05320.2	1.2e-36	98.70	polyubiquitin 10	[more]
AT4G02890.1	1.2e-36	98.70	Ubiquitin family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR019956	Ubiquitin domain	PRINTS	PR00348	UBIQUITIN	coord: 11..31 score: 85.2 coord: 32..52 score: 95.05 coord: 53..74 score: 91.18
IPR001975	Ribosomal protein L40e	SMART	SM01377	Ribosomal_L40e_3	coord: 77..128 e-value: 3.6E-27 score: 106.3
IPR001975	Ribosomal protein L40e	PFAM	PF01020	Ribosomal_L40e	coord: 78..121 e-value: 2.6E-28 score: 97.7
IPR000626	Ubiquitin-like domain	SMART	SM00213	ubq_7	coord: 1..72 e-value: 3.0E-35 score: 133.1
IPR000626	Ubiquitin-like domain	PFAM	PF00240	ubiquitin	coord: 3..74 e-value: 4.6E-34 score: 116.0
IPR000626	Ubiquitin-like domain	PROSITE	PS50053	UBIQUITIN_2	coord: 1..76 score: 30.452106
None	No IPR available	GENE3D	3.10.20.90		coord: 1..79 e-value: 7.9E-46 score: 155.9
None	No IPR available	PANTHER	PTHR10666	UBIQUITIN	coord: 1..123
None	No IPR available	PANTHER	PTHR10666:SF342	UBIQUITIN-60S RIBOSOMAL PROTEIN L40	coord: 1..123
None	No IPR available	CDD	cd01803	Ubl_ubiquitin	coord: 1..76 e-value: 2.00868E-56 score: 168.777
IPR038587	Ribosomal protein L40e superfamily	GENE3D	4.10.1060.50		coord: 80..128 e-value: 2.2E-29 score: 103.2
IPR019954	Ubiquitin conserved site	PROSITE	PS00299	UBIQUITIN_1	coord: 27..52
IPR029071	Ubiquitin-like domain superfamily	SUPERFAMILY	54236	Ubiquitin-like	coord: 1..76
IPR011332	Zinc-binding ribosomal protein	SUPERFAMILY	57829	Zn-binding ribosomal proteins	coord: 76..126

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy05g020890.1	Lcy05g020890.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0019941	modification-dependent protein catabolic process
biological_process	GO:0016567	protein ubiquitination
biological_process	GO:0006412	translation
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0031386	protein tag
molecular_function	GO:0003735	structural constituent of ribosome
molecular_function	GO:0031625	ubiquitin protein ligase binding
molecular_function	GO:0005515	protein binding