Lcy05g020490 (gene) Sponge gourd (P93075) v1

Overview
NameLcy05g020490
Typegene
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionMitochondrial import inner membrane translocase subunit tim16
LocationChr05: 48454761 .. 48461240 (+)
RNA-Seq ExpressionLcy05g020490
SyntenyLcy05g020490
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CCCCCCTCCCCCCCGCGTTTTTCATTTTCGAAGCAGCAGACCCACGATTTCCTCTTCCCTCGCGTCGCCGGCCAGCTTCCATCTCCGTTTTTCTCTTCGCCGTCGCCGCCTGTCATCCTCGCGCCGTCGTCTCTGTCCCTCTCGCGTGGTTGATCGGTTAGAGCAGCAAGTCCGCGCGATTCCTCCTCGTTTCCGGCCACACCCGCAACGTAAGTTATCTTTTCTTCCTCGTTTCCATTTGGTTTCGGTAGCCAGATCTTAATCTCCCTCCTTCTCTCTTGTTTCGGCCAGGCCCACGAAGAAGGAACGATTTCTTCCTCTCTTCCGTCGGCTCTCTCTCTGTTCTGCTCTGCCTCCCCGTTTTTCGGCCGAAACCACACCAATCCGCGAGATCCAGTGCTCTTTTTCCGTCTCTTCAGTGAATTTGGTGAGTTTTGGTTCCACCCAAGCTTTATTAATCTCAATTCAGATTACCCATTCTTGTTTAGAATTGGGTTTTGGGATTGATTTCTTATTTTTCCAGCGCTGTTCAGTGTGGTTTTGAACTCGGAATCATCCTTGTGTCGTGACCCACTCCCTGATTGGCCCTAAACTCGACACCCACTGTCTAGAGACTCTAAACAAGCGGGTTTAAAGCTCTTTGTTTGCTGGACAGCATGAGTTCGGGGTTATTCGCTTGCTGATCGGTAAATTCCAGCACCCTCTATTTCCTTTATTAATTCTTTTAGTGCTTTAAATCAATTCCCAACCCTTAGAAGTCTTTGCTTGTAGTTCGGGCTCTTTCGGCTCTTTTGATTGGTTCCGCTGATCTTTTAGGATCGCTTAGGAGCGCAATAGGTAAGTAGTTCTGAATTGGTGAAGTCTGTTTGATTGCATGATGCACGGTGTATGTTTCTTGCTTCTTGCTTCTATGTATTCATGTAATTATGATTTATGAAATATATGAACGGTTGTTTGTGATGATTGGTTGTAAAGCATGCTAGTTTTGTCGTGAGTTCATGAGTTATGCATGAGATGAGTTTGTGATGTTGTTGTATGTATATGCTTGGTGGACATAGAAGCATGTTGCAGGGCATATGCATTCTAGATAGTTGTGAGAAAAGAGGTCAGGGACCTAAATGCGAAAGAAAGGCAAGATGAGTGAATGTTAGTGCACCTCGAGTACAAATGGTCGTGGGGTGTCATGTTACCATTGGTTTTAAGAGAAGCATCGAGGCCTTGGGTACAAATGGTCAAGGGTCGGTGTGGTGAGTCTAGAAAGCAAGTATTGGGTGCATGGGGAAGGGCCAATACGTTGCTAAGTCATTGGTGCACCTTGGGTACAAATGGCCTAGGGGTGATGTACAGTTCGAGGCCTTGGGTACAAATGGTCAAGGATCGAACGTCGAGCTTCGTAGAGAGCATTGTGGCCCTGGGTACAAATGGTCAGGGGACAGTGCGGCTCAAAGGGTCTCTCTTGGAGAGCTTTGTGAGGGCTAAATATGAGCGTTGAGTGAGCTCGTGGAGCATGAGTGGTTAGTGAGTTGCATAGAGAGATGCCTGAGTTATGGCTTAGGAGAGTCATTCATTTTACTAGCTTTTGAGCGTGTTGTTGTGTTTATCGCTTTAAGAAGCATGTTGTTTGCACATGAAAAACATGTTGTTTGCTTGGTTGTTGTTTGATGGCTTCTCAATTAGGGTTGCTTACCAGTACCATGGTTGTATTGACCCTCTCCCCTCTCTCTCCCCCAACTTCTAGATTATGTAGCTTGTGAGGACTGCCTTGACCATGGTGATGCTGAGGAGACGCATGAGGAAGGACCATAGCTAGATAGCTTTATTTTTCCTTTATATTTCCATCTTGGATAAAAGGTAGTTGTTGCTTACATTGGTTGGACAGTTGTTTGTCCTATTTGGTTTAGTTCTGAATTTATTCTTGTTGAAACGCTAGGTTTTAGTTGTGTTGGTGTTAATGAACTCTATCTCTTCATTTAGTTAAAAATAATTAAGTTTGTTTTGAATAAACTAAAGTTGTGAGCTTTTTTAAGGTTGTGTTCTGGTTAGATAGTTGTTGATACCAAACTTGACTTGTATGGTGTTTGTGTTGAAGTTTGGTGGGGTAATTGAAAATGTTATAGAAGTGTTATTCTTGTTCTAGCAAGTGTTTGAAAATTTTAGTTCTTCATATGTTGTCATGTTGTCGAAATTTTCGGAGCACTCGGTTAGGAGTTAGTAATGTAGCTAGGTTAGTCATATAAAAACCTGGAACGTTACAGTTGGTATCAGAGCAGAGTTGTTCCTGTAGACTGACCTAGGAAATCCAGGTTGTTTGGGAGTTTAGGGTAATGATCTTCCTCGTTCTCCTCTCCATCACCAGGTATGTTGGAATAATGTTGTTATATTATCTGGTTGTGTAATATTTGTTACTTTGAATATGCCATGCATGATTTTTGTTTGATGTACTTGATTGCCTTACATGATTATTGTTAGTTTGCTTGTATTCTTATTGTTTGTCTTGGTGGCCTTGTCTGAGCATGTTGTTTTCCTATGCTGCTTTATTTTATAGTAGTTAGGCTTAGGATGCTCCCTTTAGGTGGTTAGATAGCTTGCTTTGATTGCATGTTTATCGTATGATAGTAGGATTAGGATGCTGCCTAGTCTTAGGTTAAAGCTTTAATCCTGGTTTGCTATATGTTCATTGACCTTAGTACCATCTTCTCAGTCAATGGCTCGTGGTCGGGGTAGACCCAGAATCCCAGTTAATAGGCAAGAGAATCAGGTAGATGATGTCAATGCTCAACAATAGGCAATAGGGAGCATCCTAAGCCTAGTTACTATAAAATAAAGCCCTCCAGACCACATGTTCGATAACCCACCTTAATCATAATATGCACATAGACTATAGGTTTCAAGCTGTCAATGGATTTCCAAGGACCTTTCAATGAATTTAAAGATTTGGTATTTGGCATGAGGTCACAAATGTGTGGATCCATATTTAGAAGCAATAACCCGACGCCAAAGAGCTTCCTTTCTAGATGAAAATACCAAATCCATTTGGCCAAAAGAGAGATATACCCATAACGGTGAAACCACCCTCCTCCAATGGTGCCTACTGCCTTTACACTCTCCCGTCTTAACAAATGAGTGCCCTTAGTCTCGATACTACATCTCCATAGAAAATTCCTAAATAGTTTTTCCAGTTTTTTTTATCACCTTCGTGGGGTGCCCAGAAAAGAGAGATTTATAAGTAAGGATTAGTCTAAGGTAGCTTGTATGAGAGTAAGCTTATCTCCTTTTGAGAGATGTGTGGTGCCCCAAGTGAAAAGCCTTTTTTCCACCTTTTCAATCACTGAATCCCCAAAAGATGTGGAGTTGGGTTTACCATTGAGAGGAAAACCAGCGTATGTGTTCGACCATTTGTCCAATTTGCATCCATAACATAACGACCAATTAAGAGGGATAGATGTTGTGGGATTCTTTTTTGTATGCTCGTGTATTTTTCATTTTTTCTCAATGAAAGCTCGGTTTTTCGTTTTTTTTTTAACCTTCACTTTTATGACTAAATTTGCAGGAGGAAAAGTGAAGTATGTTTGAGAATTGTCCCTGCTATTGAATTTTAACCTATTTGTATTATTTCTATGCTAAATATTCTTTCTTTCCTAATTAAACCTATTTGTAGCATTGAAATTTGCATATGCCTTTTCTTATTACCATTTCTATCTAATTGGATTGCAGAAGCAAAAGGTTTAGGGTTACGGTCGCAGCACCAAGGGCAGCCCCTCACTCTCTTCTCGATTTCTTTTTGCCACCGCACATCCCTCTCTTTGCTCCCTCTTATTTAACGATTTGCCACCCTCCCCTCTCTCCGTATCGTCATATCAGGTAATCTTTCAACTATTCACGGCCCGACGCCAGTAGGGTGAACATTGGTTCCCTGTTTCGATATCCTCTATTCAAATACTTTTTGATCGTCCTCCATATTCACAAGGCAAGTCTGAATGATATTCTGATTTCTAATTCAAATATTCTATTTGAGCCTTAAAACCCTAAATAAAACGAAATGACCCCTAAAATTTCTTACATTGCTCGCCCCTTGGTTGGCTAAATAGCTTCTTTGATTAATTTCGCAGCTCTATCCGGCTTTAACGATTCTGGACTGTCATCAAGGCCCGCCAATTAATCATGGTATCTCTCTTCTTTCTTTCTCTCCTCCTCTGACTTGATGGAGGATCGGTTTTTAAGATAACGAGAAAATAAATAATGAATTGGGAGACGATGTATGAACATGATTTATGCTGTTAATCTTATTTGAAATATTATGCATCGGTCTCCATTGTTGGGTTATTTGTTTTCATATTGATTATAGATTATGAGTTTAATTCATAGTTTTCTTCATTCCCAAATTTTCTCTGGTGGAAGTTTTTGACCAAGCAAATGAGGGAGTTAAGTCTTGTGGAAATTTTCTCTATACAACGTCCTATTTTTCGTTTTCTTTTTTTTTTTTTTCCTCCGTGTATTTATTGTAAATATGTTGGGTCCTTTGTGAAATGATGCTGAATTTCTTGTCCTCTCCAATTTTGTAAGCATTTGCAATTAAGTTGCATATTGACTTGCTGGTCATCTTTCTTGCCAACTTCATTGGGAAAAAAATTGGCAAACCATATTCAAAATGTATTTGTGTATCACTTTTGTCATGTTATCTTTTTCATGAGTGTACATTGATTTTTTTATCCATAGAATCAATGTTATCTATTCAGAACTGGTGTTTAGCATAGCTGCTCTGTCGATGTCTTTAGTTTACGACAATGGAGAGGAGAAGATACTGCATAATGTTTTAAATTTTCTTATTCAGTTTGACAACTTCATACAAGAGAACCTCTTTGCTTATATGTTTATTTGGACAGGCTGCAAAAATTCTTGCCAATTTAATTGTTATGGGCTCTGGGATACTTGCTAGGGCCTTTGTTCAAGCCTACCGTCAAGCCCTTGCGAGTAAGTACACTCTTTTTATTCCACCACTGTTTTTTTTTCCTTGATTGATTGGATGTTGGTCAATTCGTCCTGAATATCATGGTTATTGGTGTAAATTTTCGACTGGCTTGTTGGAAACTAAAAATGACATCAACATATAGAACAAAAGAAATTTGCATCTTGTCTTTGAACTATCAGAAGCTATGATGTAATGGGGTGAGCTTGGGATGGACAATCGCTTTGCCAATAAGAACAAAGTTCTATGTACACGTGCACCTAGTTTAATTCTGCTTCCGGTATTGAAATAGACATCGAAGCTTCTTTCAATGTACTGGGGGGATGTTAACATCCTGCATTTCTATCTTTTACATCCTTCCTCAACTTTGAATGCCAGAATAATGTCTGAGAATCTGTTATTTTTCTAGCCTGTGACATGGACGAGCGTTTTACAAATCAGAACTAAGTATTAATTGCACGTATATTATAACCATGAGTCATTTTGTTGACAAATAATGATATCAAAACATTTTGAGTGTTCATGGCCTGGATGATAGCATCCTGCAGTTCCATCCCTCACCTTTTTGGTTACCCTTAAAATGCAGAATAATATCTTTTTAGATCTTTAGCGAAAATGCTTTTATTTCTCTAGCATGTGACGTGATTTATGGGCTACAATTTCGTTAAAGTTGATTCTGGTGTAGTTGTGTTATAATCTGTTGAACATGTACTATGTTAGTTTGGACAAATTTGGTTGTTTATACAAAGTTTCTACTTAATGAGGGAGAGTTTGATATACTTATAGATGATTATGCTCCGTATCAATTCTCTTGTGTGTTGCAGATGCTTCAAAGTCGGGTGTTGCTCAAGAAACAATGCAAAACAGTGTCCGCAGAGCAAGCAAAGCGATGACAGAGCAAGAAGCCAGGCAGATTCTCGGCGTCACCGAGGAAATGCCTTGGGAGGAAATTGTGAAGGTCAATCATTTCTTACTTTTCACTAAAATAGTTCCTTCCTGACATTTACATATTATGAATAGGCTTTTGACAATCATCCTCTGTGATCAGAAATATGACGCTTTGTTTGAAAGGAATGCTCAGAGTGGAAGCTTTTATCTTCAGTCAAAAGTTCACAGAGCCAAGGAACGATTAGAAACTCTCTATCAAAGCAAAGGTGAGGATGCCTCTGGCTGAGCGTTCTGAGGGAGTGTACTTTGTTTTGCTCATTTACGGTTCTTGTATAATTCTTATTTTGGTGATGGCCGCCGGCATGGATGATGAAATTGATGTATAATCTTTATTTTTACGTCTCTTTCCCTCTAATTCAAGCTAGTAGGTCTTGAAAGTAATACAATTACGCGACAATAAATAATCACTTGTTATGTGGATATAGCGTTTAACAACATTTATACAAAATGCTCTATTAAAGTCTTAGGTGTGATGGCGCTTCCACTTGCAGTCACTTCCATTCGTGGAAAAGGGTTCATGTTTTTCTCTTTTTGAGTTGAATAATAATTGTGGTGGTGATTGAACC

mRNA sequence

CCCCCCTCCCCCCCGCGTTTTTCATTTTCGAAGCAGCAGACCCACGATTTCCTCTTCCCTCGCGTCGCCGGCCAGCTTCCATCTCCGTTTTTCTCTTCGCCGTCGCCGCCTGTCATCCTCGCGCCGTCGTCTCTGTCCCTCTCGCGTGGTTGATCGGTTAGAGCAGCAAGTCCGCGCGATTCCTCCTCGTTTCCGGCCACACCCGCAACGCCCACGAAGAAGGAACGATTTCTTCCTCTCTTCCGTCGGCTCTCTCTCTGTTCTGCTCTGCCTCCCCGTTTTTCGGCCGAAACCACACCAATCCGCGAGATCCAGTGCTCTTTTTCCGTCTCTTCAGTGAATTTGTGTGGTTTTGAACTCGGAATCATCCTTGTGTCGTGACCCACTCCCTGATTGGCCCTAAACTCGACACCCACTGTCTAGAGACTCTAAACAAGCGGGTTTAAAGCTCTTTGTTTGCTGGACAGCATGAGTTCGGGGTTATTCGCTTGCTGATCGTTCGGGCTCTTTCGGCTCTTTTGATTGGTTCCGCTGATCTTTTAGGATCGCTTAGGAGCGCAATAGATTATGTAGCTTGTGAGGACTGCCTTGACCATGGTGATGCTGAGGAGACGCATGAGGAAGGACCATAGCTAGATAGCTTTATTTTTCCTTTATATTTCCATCTTGGATAAAAGAAGCAAAAGGTTTAGGGTTACGGTCGCAGCACCAAGGGCAGCCCCTCACTCTCTTCTCGATTTCTTTTTGCCACCGCACATCCCTCTCTTTGCTCCCTCTTATTTAACGATTTGCCACCCTCCCCTCTCTCCGTATCGTCATATCAGGTAATCTTTCAACTATTCACGGCCCGACGCCAGTAGGGTGAACATTGGTTCCCTGTTTCGATATCCTCTATTCAAATACTTTTTGATCGTCCTCCATATTCACAAGCTCTATCCGGCTTTAACGATTCTGGACTGTCATCAAGGCCCGCCAATTAATCATGGCTGCAAAAATTCTTGCCAATTTAATTGTTATGGGCTCTGGGATACTTGCTAGGGCCTTTGTTCAAGCCTACCGTCAAGCCCTTGCGAATGCTTCAAAGTCGGGTGTTGCTCAAGAAACAATGCAAAACAGTGTCCGCAGAGCAAGCAAAGCGATGACAGAGCAAGAAGCCAGGCAGATTCTCGGCGTCACCGAGGAAATGCCTTGGGAGGAAATTGTGAAGAAATATGACGCTTTGTTTGAAAGGAATGCTCAGAGTGGAAGCTTTTATCTTCAGTCAAAAGTTCACAGAGCCAAGGAACGATTAGAAACTCTCTATCAAAGCAAAGGTGAGGATGCCTCTGGCTGAGCGTTCTGAGGGAGTGTACTTTGTTTTGCTCATTTACGGTTCTTGTATAATTCTTATTTTGGTGATGGCCGCCGGCATGGATGATGAAATTGATGTATAATCTTTATTTTTACGTCTCTTTCCCTCTAATTCAAGCTAGTAGGTCTTGAAAGTAATACAATTACGCGACAATAAATAATCACTTGTTATGTGGATATAGCGTTTAACAACATTTATACAAAATGCTCTATTAAAGTCTTAGGTGTGATGGCGCTTCCACTTGCAGTCACTTCCATTCGTGGAAAAGGGTTCATGTTTTTCTCTTTTTGAGTTGAATAATAATTGTGGTGGTGATTGAACC

Coding sequence (CDS)

ATGGCTGCAAAAATTCTTGCCAATTTAATTGTTATGGGCTCTGGGATACTTGCTAGGGCCTTTGTTCAAGCCTACCGTCAAGCCCTTGCGAATGCTTCAAAGTCGGGTGTTGCTCAAGAAACAATGCAAAACAGTGTCCGCAGAGCAAGCAAAGCGATGACAGAGCAAGAAGCCAGGCAGATTCTCGGCGTCACCGAGGAAATGCCTTGGGAGGAAATTGTGAAGAAATATGACGCTTTGTTTGAAAGGAATGCTCAGAGTGGAAGCTTTTATCTTCAGTCAAAAGTTCACAGAGCCAAGGAACGATTAGAAACTCTCTATCAAAGCAAAGGTGAGGATGCCTCTGGCTGA

Protein sequence

MAAKILANLIVMGSGILARAFVQAYRQALANASKSGVAQETMQNSVRRASKAMTEQEARQILGVTEEMPWEEIVKKYDALFERNAQSGSFYLQSKVHRAKERLETLYQSKGEDASG
Homology
[Close]
BLAST of Lcy05g020490 vs. ExPASy Swiss-Prot
Match: Q93VV9 (Mitochondrial import inner membrane translocase subunit PAM16 like 2 OS=Arabidopsis thaliana OX=3702 GN=PAM16L2 PE=2 SV=1)

HSP 1 Score: 160.6 bits (405), Expect = 1.1e-38
Identity = 85/111 (76.58%), Postives = 98/111 (88.29%), Query Frame = 0 

Query: 1   MAAKILANLIVMGSGILARAFVQAYRQALANASKSGVAQETMQNSVRRASKAMTEQEARQ 60
           MA ++LANLIVMGSGI+ RA  QAYRQALANASKSGVAQE MQN VR+A KA+TEQEARQ
Sbjct: 1   MAGRLLANLIVMGSGIIGRAVFQAYRQALANASKSGVAQEAMQNGVRQAGKAITEQEARQ 60

Query: 61  ILGVTEEMPWEEIVKKYDALFERNAQSGSFYLQSKVHRAKERLETLYQSKG 112
           ILGVTE+  WEEI++KYD LFE NA++GSFYLQSKVHRAKE LE +Y+S+G
Sbjct: 61  ILGVTEKTSWEEILQKYDKLFENNAKAGSFYLQSKVHRAKECLEVVYRSQG 111

[Close]
BLAST of Lcy05g020490 vs. ExPASy Swiss-Prot
Match: Q93W66 (Mitochondrial import inner membrane translocase subunit PAM16 like 1 OS=Arabidopsis thaliana OX=3702 GN=PAM16L1 PE=2 SV=1)

HSP 1 Score: 137.5 bits (345), Expect = 9.6e-32
Identity = 77/108 (71.30%), Postives = 88/108 (81.48%), Query Frame = 0 

Query: 1   MAAKILANLIVMGSGILARAFVQAYRQALANASKSGVAQETMQNSVRRASKAMTEQEARQ 60
           MAA++LA++IVMGSGI+ARA  QAYRQALANASK+GVA E  Q   R     + E EARQ
Sbjct: 1   MAARVLASVIVMGSGIIARACTQAYRQALANASKTGVAHEATQTIKR--GLTIGEAEARQ 60

Query: 61  ILGVTEEMPWEEIVKKYDALFERNAQSGSFYLQSKVHRAKERLETLYQ 109
           ILGVTE+  W+EI+KKYD LFERNAQ+GSFYLQSKVHRAKE LET YQ
Sbjct: 61  ILGVTEKSSWDEILKKYDTLFERNAQNGSFYLQSKVHRAKECLETAYQ 106

[Close]
BLAST of Lcy05g020490 vs. ExPASy Swiss-Prot
Match: Q6PBL0 (Mitochondrial import inner membrane translocase subunit tim16 OS=Danio rerio OX=7955 GN=pam16 PE=2 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 2.5e-11
Identity = 50/106 (47.17%), Postives = 67/106 (63.21%), Query Frame = 0 

Query: 3   AKILANLIVMGSGILARAFVQAYRQ--ALANASKSGVAQETMQNSVRRASKAMTEQEARQ 62
           AK LA +IVMG+ ++ RAF +A RQ  A + A+     Q   Q++   +   MT QEA+Q
Sbjct: 2   AKYLAQIIVMGAQVVGRAFARALRQEFAASQAAAEARGQAGRQSAAASSFTGMTLQEAQQ 61

Query: 63  ILGVTEEMPWEEIVKKYDALFERN--AQSGSFYLQSKVHRAKERLE 105
           IL ++   P EEI K Y+ LF+ N  A  GSFY+QSKV RAKERL+
Sbjct: 62  ILNISTLTP-EEIQKNYEHLFKVNDKAVGGSFYIQSKVVRAKERLD 106

[Close]
BLAST of Lcy05g020490 vs. ExPASy Swiss-Prot
Match: Q7S6S4 (Mitochondrial import inner membrane translocase subunit tim16 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) OX=367110 GN=un-4 PE=3 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 3.5e-10
Identity = 47/122 (38.52%), Postives = 72/122 (59.02%), Query Frame = 0 

Query: 1   MAAKILANLIVMGSGILARAFVQAYRQALANASKSGVAQETMQNSVRRAS--KAMTEQEA 60
           MA +++  ++V+GS +L RAF +AY+QA A++      Q+    +  RAS    MT  EA
Sbjct: 1   MAYRLITQVVVVGSRVLGRAFAEAYKQAAASSQYQRAQQKNGNAATGRASLTSGMTLDEA 60

Query: 61  RQILGVTEEMP-----WEEIVKKYDALFERN--AQSGSFYLQSKVHRAKERLETLYQSKG 114
            +IL V +         EE+++++  LF+ N   + GSFYLQSKV RA+ERLE   + K 
Sbjct: 61  CKILNVNKPADGTAANMEEVMERFKRLFDANDPEKGGSFYLQSKVVRARERLEAEIKPKM 120

[Close]
BLAST of Lcy05g020490 vs. ExPASy Swiss-Prot
Match: Q9CQV1 (Mitochondrial import inner membrane translocase subunit TIM16 OS=Mus musculus OX=10090 GN=Pam16 PE=1 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 4.6e-10
Identity = 49/106 (46.23%), Postives = 67/106 (63.21%), Query Frame = 0 

Query: 3   AKILANLIVMGSGILARAFVQAYRQALANASKSGVAQETMQNSVRRAS--KAMTEQEARQ 62
           AK LA +IVMG  ++ RAF +A RQ  A +  +  A+    +    AS    ++ QEA+Q
Sbjct: 2   AKYLAQIIVMGVQVVGRAFARALRQEFAASQAAADARGRAGHQSAAASNLSGLSLQEAQQ 61

Query: 63  ILGVTEEMPWEEIVKKYDALFERNAQS--GSFYLQSKVHRAKERLE 105
           IL V++  P EE+ K Y+ LF+ N +S  GSFYLQSKV RAKERL+
Sbjct: 62  ILNVSKLSP-EEVQKNYEHLFKVNDKSVGGSFYLQSKVVRAKERLD 106

[Close]
BLAST of Lcy05g020490 vs. ExPASy TrEMBL
Match: A0A5D3E4Y7 (Mitochondrial import inner membrane translocase subunit tim16 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G001310 PE=3 SV=1)

HSP 1 Score: 201.4 bits (511), Expect = 2.0e-48
Identity = 107/114 (93.86%), Postives = 112/114 (98.25%), Query Frame = 0 

Query: 1   MAAKILANLIVMGSGILARAFVQAYRQALANASKSGVAQETMQNSVRRASKAMTEQEARQ 60
           MAAKILANLIVMGSGILARAFVQAYRQALANASKSGVAQETMQN+VRRASK MTEQEARQ
Sbjct: 56  MAAKILANLIVMGSGILARAFVQAYRQALANASKSGVAQETMQNTVRRASKVMTEQEARQ 115

Query: 61  ILGVTEEMPWEEIVKKYDALFERNAQSGSFYLQSKVHRAKERLETLYQSKGEDA 115
           ILGVTEE PWEE+VKKYDALFERNAQ+GSFYLQSKVHRAKERLETLYQ+KG+DA
Sbjct: 116 ILGVTEETPWEEVVKKYDALFERNAQTGSFYLQSKVHRAKERLETLYQNKGQDA 169

[Close]
BLAST of Lcy05g020490 vs. ExPASy TrEMBL
Match: A0A1S3CJP3 (mitochondrial import inner membrane translocase subunit tim16 OS=Cucumis melo OX=3656 GN=LOC103501727 PE=3 SV=1)

HSP 1 Score: 200.3 bits (508), Expect = 4.4e-48
Identity = 107/114 (93.86%), Postives = 111/114 (97.37%), Query Frame = 0 

Query: 1   MAAKILANLIVMGSGILARAFVQAYRQALANASKSGVAQETMQNSVRRASKAMTEQEARQ 60
           MAAKILANLIVMGSGILARAFVQAYRQALANASKSGVAQETMQN+VRRASK MTEQEARQ
Sbjct: 1   MAAKILANLIVMGSGILARAFVQAYRQALANASKSGVAQETMQNTVRRASKVMTEQEARQ 60

Query: 61  ILGVTEEMPWEEIVKKYDALFERNAQSGSFYLQSKVHRAKERLETLYQSKGEDA 115
           ILGVTEE PWEE+VKKYDALFERNAQ+GSFYLQSKVHRAKERLETLYQ KG+DA
Sbjct: 61  ILGVTEETPWEEVVKKYDALFERNAQTGSFYLQSKVHRAKERLETLYQIKGQDA 114

[Close]
BLAST of Lcy05g020490 vs. ExPASy TrEMBL
Match: A0A0A0LW69 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G185100 PE=3 SV=1)

HSP 1 Score: 199.9 bits (507), Expect = 5.8e-48
Identity = 106/114 (92.98%), Postives = 111/114 (97.37%), Query Frame = 0 

Query: 1   MAAKILANLIVMGSGILARAFVQAYRQALANASKSGVAQETMQNSVRRASKAMTEQEARQ 60
           MAAKILANLIVMGSGILARAFVQAYRQALANASKSGVAQETMQN+VRRASK MTEQEARQ
Sbjct: 1   MAAKILANLIVMGSGILARAFVQAYRQALANASKSGVAQETMQNTVRRASKVMTEQEARQ 60

Query: 61  ILGVTEEMPWEEIVKKYDALFERNAQSGSFYLQSKVHRAKERLETLYQSKGEDA 115
           ILGVTEE PWEE+ KKYDALFERNAQ+GSFYLQSKVHRAKERLETLYQ+KG+DA
Sbjct: 61  ILGVTEETPWEEVAKKYDALFERNAQTGSFYLQSKVHRAKERLETLYQNKGQDA 114

[Close]
BLAST of Lcy05g020490 vs. ExPASy TrEMBL
Match: A0A6J1HVD2 (mitochondrial import inner membrane translocase subunit PAM16 like 2-like isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111467019 PE=3 SV=1)

HSP 1 Score: 198.7 bits (504), Expect = 1.3e-47
Identity = 107/114 (93.86%), Postives = 110/114 (96.49%), Query Frame = 0 

Query: 1   MAAKILANLIVMGSGILARAFVQAYRQALANASKSGVAQETMQNSVRRASKAMTEQEARQ 60
           MAAKILANLIVMGSGILARAFVQAYRQAL NASKSGVAQET+QNSVRRASK MTEQEARQ
Sbjct: 1   MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQNSVRRASKVMTEQEARQ 60

Query: 61  ILGVTEEMPWEEIVKKYDALFERNAQSGSFYLQSKVHRAKERLETLYQSKGEDA 115
           ILGVT E PWEEIVKKYDALFERNAQ+GSFYLQSKVHRAKERLETLYQSKG+DA
Sbjct: 61  ILGVTAETPWEEIVKKYDALFERNAQTGSFYLQSKVHRAKERLETLYQSKGQDA 114

[Close]
BLAST of Lcy05g020490 vs. ExPASy TrEMBL
Match: A0A6J1HHA5 (mitochondrial import inner membrane translocase subunit PAM16 like 2-like OS=Cucurbita moschata OX=3662 GN=LOC111464057 PE=3 SV=1)

HSP 1 Score: 198.4 bits (503), Expect = 1.7e-47
Identity = 106/114 (92.98%), Postives = 110/114 (96.49%), Query Frame = 0 

Query: 1   MAAKILANLIVMGSGILARAFVQAYRQALANASKSGVAQETMQNSVRRASKAMTEQEARQ 60
           MAAKILANLIVMGSGILARAFVQAYRQAL NASKSGVAQET+QNSVRRASK MTEQEARQ
Sbjct: 1   MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQNSVRRASKVMTEQEARQ 60

Query: 61  ILGVTEEMPWEEIVKKYDALFERNAQSGSFYLQSKVHRAKERLETLYQSKGEDA 115
           ILG+T E PWEEIVKKYDALFERNAQ+GSFYLQSKVHRAKERLETLYQSKG+DA
Sbjct: 61  ILGITAETPWEEIVKKYDALFERNAQTGSFYLQSKVHRAKERLETLYQSKGQDA 114

[Close]
BLAST of Lcy05g020490 vs. NCBI nr
Match: KAA0035623.1 (mitochondrial import inner membrane translocase subunit tim16 [Cucumis melo var. makuwa] >TYK30919.1 mitochondrial import inner membrane translocase subunit tim16 [Cucumis melo var. makuwa])

HSP 1 Score: 201.4 bits (511), Expect = 4.1e-48
Identity = 107/114 (93.86%), Postives = 112/114 (98.25%), Query Frame = 0 

Query: 1   MAAKILANLIVMGSGILARAFVQAYRQALANASKSGVAQETMQNSVRRASKAMTEQEARQ 60
           MAAKILANLIVMGSGILARAFVQAYRQALANASKSGVAQETMQN+VRRASK MTEQEARQ
Sbjct: 56  MAAKILANLIVMGSGILARAFVQAYRQALANASKSGVAQETMQNTVRRASKVMTEQEARQ 115

Query: 61  ILGVTEEMPWEEIVKKYDALFERNAQSGSFYLQSKVHRAKERLETLYQSKGEDA 115
           ILGVTEE PWEE+VKKYDALFERNAQ+GSFYLQSKVHRAKERLETLYQ+KG+DA
Sbjct: 116 ILGVTEETPWEEVVKKYDALFERNAQTGSFYLQSKVHRAKERLETLYQNKGQDA 169

[Close]
BLAST of Lcy05g020490 vs. NCBI nr
Match: XP_008463624.1 (PREDICTED: mitochondrial import inner membrane translocase subunit tim16 [Cucumis melo] >XP_008463625.1 PREDICTED: mitochondrial import inner membrane translocase subunit tim16 [Cucumis melo] >XP_008463626.1 PREDICTED: mitochondrial import inner membrane translocase subunit tim16 [Cucumis melo])

HSP 1 Score: 200.3 bits (508), Expect = 9.2e-48
Identity = 107/114 (93.86%), Postives = 111/114 (97.37%), Query Frame = 0 

Query: 1   MAAKILANLIVMGSGILARAFVQAYRQALANASKSGVAQETMQNSVRRASKAMTEQEARQ 60
           MAAKILANLIVMGSGILARAFVQAYRQALANASKSGVAQETMQN+VRRASK MTEQEARQ
Sbjct: 1   MAAKILANLIVMGSGILARAFVQAYRQALANASKSGVAQETMQNTVRRASKVMTEQEARQ 60

Query: 61  ILGVTEEMPWEEIVKKYDALFERNAQSGSFYLQSKVHRAKERLETLYQSKGEDA 115
           ILGVTEE PWEE+VKKYDALFERNAQ+GSFYLQSKVHRAKERLETLYQ KG+DA
Sbjct: 61  ILGVTEETPWEEVVKKYDALFERNAQTGSFYLQSKVHRAKERLETLYQIKGQDA 114

[Close]
BLAST of Lcy05g020490 vs. NCBI nr
Match: XP_004139541.1 (mitochondrial import inner membrane translocase subunit PAM16 like 2 [Cucumis sativus] >XP_011655013.1 mitochondrial import inner membrane translocase subunit PAM16 like 2 [Cucumis sativus] >KGN65052.1 hypothetical protein Csa_013024 [Cucumis sativus])

HSP 1 Score: 199.9 bits (507), Expect = 1.2e-47
Identity = 106/114 (92.98%), Postives = 111/114 (97.37%), Query Frame = 0 

Query: 1   MAAKILANLIVMGSGILARAFVQAYRQALANASKSGVAQETMQNSVRRASKAMTEQEARQ 60
           MAAKILANLIVMGSGILARAFVQAYRQALANASKSGVAQETMQN+VRRASK MTEQEARQ
Sbjct: 1   MAAKILANLIVMGSGILARAFVQAYRQALANASKSGVAQETMQNTVRRASKVMTEQEARQ 60

Query: 61  ILGVTEEMPWEEIVKKYDALFERNAQSGSFYLQSKVHRAKERLETLYQSKGEDA 115
           ILGVTEE PWEE+ KKYDALFERNAQ+GSFYLQSKVHRAKERLETLYQ+KG+DA
Sbjct: 61  ILGVTEETPWEEVAKKYDALFERNAQTGSFYLQSKVHRAKERLETLYQNKGQDA 114

[Close]
BLAST of Lcy05g020490 vs. NCBI nr
Match: XP_022967548.1 (mitochondrial import inner membrane translocase subunit PAM16 like 2-like isoform X3 [Cucurbita maxima])

HSP 1 Score: 198.7 bits (504), Expect = 2.7e-47
Identity = 107/114 (93.86%), Postives = 110/114 (96.49%), Query Frame = 0 

Query: 1   MAAKILANLIVMGSGILARAFVQAYRQALANASKSGVAQETMQNSVRRASKAMTEQEARQ 60
           MAAKILANLIVMGSGILARAFVQAYRQAL NASKSGVAQET+QNSVRRASK MTEQEARQ
Sbjct: 1   MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQNSVRRASKVMTEQEARQ 60

Query: 61  ILGVTEEMPWEEIVKKYDALFERNAQSGSFYLQSKVHRAKERLETLYQSKGEDA 115
           ILGVT E PWEEIVKKYDALFERNAQ+GSFYLQSKVHRAKERLETLYQSKG+DA
Sbjct: 61  ILGVTAETPWEEIVKKYDALFERNAQTGSFYLQSKVHRAKERLETLYQSKGQDA 114

[Close]
BLAST of Lcy05g020490 vs. NCBI nr
Match: XP_022963881.1 (mitochondrial import inner membrane translocase subunit PAM16 like 2-like [Cucurbita moschata] >KAG6571434.1 Mitochondrial import inner membrane translocase subunit PAM16 like 2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 198.4 bits (503), Expect = 3.5e-47
Identity = 106/114 (92.98%), Postives = 110/114 (96.49%), Query Frame = 0 

Query: 1   MAAKILANLIVMGSGILARAFVQAYRQALANASKSGVAQETMQNSVRRASKAMTEQEARQ 60
           MAAKILANLIVMGSGILARAFVQAYRQAL NASKSGVAQET+QNSVRRASK MTEQEARQ
Sbjct: 1   MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQNSVRRASKVMTEQEARQ 60

Query: 61  ILGVTEEMPWEEIVKKYDALFERNAQSGSFYLQSKVHRAKERLETLYQSKGEDA 115
           ILG+T E PWEEIVKKYDALFERNAQ+GSFYLQSKVHRAKERLETLYQSKG+DA
Sbjct: 61  ILGITAETPWEEIVKKYDALFERNAQTGSFYLQSKVHRAKERLETLYQSKGQDA 114

[Close]
BLAST of Lcy05g020490 vs. TAIR 10
Match: AT3G59280.1 (Protein Transporter, Pam16 )

HSP 1 Score: 160.6 bits (405), Expect = 7.5e-40
Identity = 85/111 (76.58%), Postives = 98/111 (88.29%), Query Frame = 0 

Query: 1   MAAKILANLIVMGSGILARAFVQAYRQALANASKSGVAQETMQNSVRRASKAMTEQEARQ 60
           MA ++LANLIVMGSGI+ RA  QAYRQALANASKSGVAQE MQN VR+A KA+TEQEARQ
Sbjct: 1   MAGRLLANLIVMGSGIIGRAVFQAYRQALANASKSGVAQEAMQNGVRQAGKAITEQEARQ 60

Query: 61  ILGVTEEMPWEEIVKKYDALFERNAQSGSFYLQSKVHRAKERLETLYQSKG 112
           ILGVTE+  WEEI++KYD LFE NA++GSFYLQSKVHRAKE LE +Y+S+G
Sbjct: 61  ILGVTEKTSWEEILQKYDKLFENNAKAGSFYLQSKVHRAKECLEVVYRSQG 111

[Close]
BLAST of Lcy05g020490 vs. TAIR 10
Match: AT5G61880.1 (Protein Transporter, Pam16 )

HSP 1 Score: 137.5 bits (345), Expect = 6.8e-33
Identity = 77/108 (71.30%), Postives = 88/108 (81.48%), Query Frame = 0 

Query: 1   MAAKILANLIVMGSGILARAFVQAYRQALANASKSGVAQETMQNSVRRASKAMTEQEARQ 60
           MAA++LA++IVMGSGI+ARA  QAYRQALANASK+GVA E  Q   R     + E EARQ
Sbjct: 1   MAARVLASVIVMGSGIIARACTQAYRQALANASKTGVAHEATQTIKR--GLTIGEAEARQ 60

Query: 61  ILGVTEEMPWEEIVKKYDALFERNAQSGSFYLQSKVHRAKERLETLYQ 109
           ILGVTE+  W+EI+KKYD LFERNAQ+GSFYLQSKVHRAKE LET YQ
Sbjct: 61  ILGVTEKSSWDEILKKYDTLFERNAQNGSFYLQSKVHRAKECLETAYQ 106

[Close]
BLAST of Lcy05g020490 vs. TAIR 10
Match: AT5G61880.2 (Protein Transporter, Pam16 )

HSP 1 Score: 137.5 bits (345), Expect = 6.8e-33
Identity = 77/108 (71.30%), Postives = 88/108 (81.48%), Query Frame = 0 

Query: 1   MAAKILANLIVMGSGILARAFVQAYRQALANASKSGVAQETMQNSVRRASKAMTEQEARQ 60
           MAA++LA++IVMGSGI+ARA  QAYRQALANASK+GVA E  Q   R     + E EARQ
Sbjct: 1   MAARVLASVIVMGSGIIARACTQAYRQALANASKTGVAHEATQTIKR--GLTIGEAEARQ 60

Query: 61  ILGVTEEMPWEEIVKKYDALFERNAQSGSFYLQSKVHRAKERLETLYQ 109
           ILGVTE+  W+EI+KKYD LFERNAQ+GSFYLQSKVHRAKE LET YQ
Sbjct: 61  ILGVTEKSSWDEILKKYDTLFERNAQNGSFYLQSKVHRAKECLETAYQ 106

The following BLAST results are available for this feature:
BLAST of Lcy05g020490 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q93VV91.1e-3876.58Mitochondrial import inner membrane translocase subunit PAM16 like 2 OS=Arabidop... [more]
Q93W669.6e-3271.30Mitochondrial import inner membrane translocase subunit PAM16 like 1 OS=Arabidop... [more]
Q6PBL02.5e-1147.17Mitochondrial import inner membrane translocase subunit tim16 OS=Danio rerio OX=... [more]
Q7S6S43.5e-1038.52Mitochondrial import inner membrane translocase subunit tim16 OS=Neurospora cras... [more]
Q9CQV14.6e-1046.23Mitochondrial import inner membrane translocase subunit TIM16 OS=Mus musculus OX... [more]
BLAST of Lcy05g020490 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3E4Y72.0e-4893.86Mitochondrial import inner membrane translocase subunit tim16 OS=Cucumis melo va... [more]
A0A1S3CJP34.4e-4893.86mitochondrial import inner membrane translocase subunit tim16 OS=Cucumis melo OX... [more]
A0A0A0LW695.8e-4892.98Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G185100 PE=3 SV=1[more]
A0A6J1HVD21.3e-4793.86mitochondrial import inner membrane translocase subunit PAM16 like 2-like isofor... [more]
A0A6J1HHA51.7e-4792.98mitochondrial import inner membrane translocase subunit PAM16 like 2-like OS=Cuc... [more]
BLAST of Lcy05g020490 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0035623.14.1e-4893.86mitochondrial import inner membrane translocase subunit tim16 [Cucumis melo var.... [more]
XP_008463624.19.2e-4893.86PREDICTED: mitochondrial import inner membrane translocase subunit tim16 [Cucumi... [more]
XP_004139541.11.2e-4792.98mitochondrial import inner membrane translocase subunit PAM16 like 2 [Cucumis sa... [more]
XP_022967548.12.7e-4793.86mitochondrial import inner membrane translocase subunit PAM16 like 2-like isofor... [more]
XP_022963881.13.5e-4792.98mitochondrial import inner membrane translocase subunit PAM16 like 2-like [Cucur... [more]
BLAST of Lcy05g020490 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G59280.17.5e-4076.58Protein Transporter, Pam16 [more]
AT5G61880.16.8e-3371.30Protein Transporter, Pam16 [more]
AT5G61880.26.8e-3371.30Protein Transporter, Pam16 [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF03656Pam16coord: 1..108
e-value: 4.2E-23
score: 81.8
NoneNo IPR availablePANTHERPTHR12388:SF6MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT PAM16 LIKE 1coord: 1..110
IPR036869Chaperone J-domain superfamilyGENE3D1.10.287.110DnaJ domaincoord: 53..110
e-value: 8.1E-22
score: 78.7
IPR005341Mitochondrial import inner membrane translocase subunit Tim16PANTHERPTHR12388MITOCHONDRIA ASSOCIATED GRANULOCYTE MACROPHAGE CSF SIGNALING MOLECULEcoord: 1..110

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lcy05g020490.1Lcy05g020490.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0030150 protein import into mitochondrial matrix
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005744 TIM23 mitochondrial import inner membrane translocase complex