Lcy05g019710 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy05g019710
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	Mads box protein
Location	Chr05: 41780664 .. 41781023 (-)
RNA-Seq Expression	Lcy05g019710
Synteny	Lcy05g019710

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGGTCGTCGTAAGATTGAAATCAAGAAGATCCAAAAGAAAAGTAGACAACAAGTTACCTTTTCAAAATGTTGCACCGGACTTTTCAACAAGGCGACCAAGCTCTCCATTCTTTACTTTGCTGAGATTGCCATTCTCGTCTTCTCTCCGACTAGAAAAATCTTTACATTCTCCCATCCCAATTTTGACTCCCTTTTCGATTGTTTCCTCATCAAAAATTTTCATCTGTCCAAGCATGCCGACACCTACGTCCCTCTGGCGAAGTTGAATCTTGATTGCCACGTTCGACGTCAAGAAGATGCGAGCAGAAGAGACGACGAAGAGGTCGACGAATGGTGGAAGATTTTAGTGGGATGA

mRNA sequence

ATGGAAGGTCGTCGTAAGATTGAAATCAAGAAGATCCAAAAGAAAAGTAGACAACAAGTTACCTTTTCAAAATGTTGCACCGGACTTTTCAACAAGGCGACCAAGCTCTCCATTCTTTACTTTGCTGAGATTGCCATTCTCGTCTTCTCTCCGACTAGAAAAATCTTTACATTCTCCCATCCCAATTTTGACTCCCTTTTCGATTGTTTCCTCATCAAAAATTTTCATCTGTCCAAGCATGCCGACACCTACGTCCCTCTGGCGAAGTTGAATCTTGATTGCCACGTTCGACGTCAAGAAGATGCGAGCAGAAGAGACGACGAAGAGGTCGACGAATGGTGGAAGATTTTAGTGGGATGA

Coding sequence (CDS)

ATGGAAGGTCGTCGTAAGATTGAAATCAAGAAGATCCAAAAGAAAAGTAGACAACAAGTTACCTTTTCAAAATGTTGCACCGGACTTTTCAACAAGGCGACCAAGCTCTCCATTCTTTACTTTGCTGAGATTGCCATTCTCGTCTTCTCTCCGACTAGAAAAATCTTTACATTCTCCCATCCCAATTTTGACTCCCTTTTCGATTGTTTCCTCATCAAAAATTTTCATCTGTCCAAGCATGCCGACACCTACGTCCCTCTGGCGAAGTTGAATCTTGATTGCCACGTTCGACGTCAAGAAGATGCGAGCAGAAGAGACGACGAAGAGGTCGACGAATGGTGGAAGATTTTAGTGGGATGA

Protein sequence

MEGRRKIEIKKIQKKSRQQVTFSKCCTGLFNKATKLSILYFAEIAILVFSPTRKIFTFSHPNFDSLFDCFLIKNFHLSKHADTYVPLAKLNLDCHVRRQEDASRRDDEEVDEWWKILVG

Homology

[Close]

BLAST of Lcy05g019710 vs. ExPASy Swiss-Prot
Match: Q9FKK2 (Agamous-like MADS-box protein AGL62 OS=Arabidopsis thaliana OX=3702 GN=AGL62 PE=1 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 1.6e-13
Identity = 40/73 (54.79%), Postives = 55/73 (75.34%), Query Frame = 0


Query: 2  EGRRKIEIKKIQKKSRQQVTFSKCCTGLFNKATKLSILYFAEIAILVFSPTRKIFTFSHP 61
          +GR+KIE+ K++ +S  QVTFSK  +GLF KA++L  L  AE+AI+VFSP RK+F+F HP
Sbjct: 6  KGRQKIEMVKMKNESNLQVTFSKRRSGLFKKASELCTLCGAEVAIVVFSPGRKVFSFGHP 65

Query: 62 NFDSLFDCFLIKN 75
          N DS+ D F+  N
Sbjct: 66 NVDSVIDRFINNN 78

[Close]

BLAST of Lcy05g019710 vs. ExPASy Swiss-Prot
Match: O80807 (Agamous-like MADS-box protein AGL23 OS=Arabidopsis thaliana OX=3702 GN=AGL23 PE=2 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 6.0e-13
Identity = 46/127 (36.22%), Postives = 68/127 (53.54%), Query Frame = 0


Query: 3   GRRKIEIKKIQKKSRQQVTFSKCCTGLFNKATKLSILYFAEIAILVFSPTRKIFTFSHPN 62
           GRRK+EI K+ K+S  QVTFSK   GLF KA++   L  A+IA++VFSP  K+F+F HPN
Sbjct: 7   GRRKVEIVKMTKESNLQVTFSKRKAGLFKKASEFCTLCDAKIAMIVFSPAGKVFSFGHPN 66

Query: 63  FDSLFDCF--------------LIKNFHLSKHADTYVPL-AKLNLDCHVRRQEDASRRDD 115
            D L D F                   H+     +Y  + A++  +   ++    + R++
Sbjct: 67  VDVLLDHFRGCVVGHNNTNLDESYTKLHVQMLNKSYTEVKAEVEKEQKNKQSRAQNEREN 126

[Close]

BLAST of Lcy05g019710 vs. ExPASy Swiss-Prot
Match: Q4PSU4 (Agamous-like MADS-box protein AGL61 OS=Arabidopsis thaliana OX=3702 GN=AGL61 PE=1 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 1.1e-11
Identity = 37/72 (51.39%), Postives = 53/72 (73.61%), Query Frame = 0


Query: 3   GRRKIEIKKIQKKSRQQVTFSKCCTGLFNKATKLSILYFAEIAILVFSPTRKIFTFSHPN 62
           GR+KI + KI+K+S +QVTFSK   GLF KA++L  L  AEI I+VFSP +K F+F HP+
Sbjct: 63  GRQKIPMVKIKKESHRQVTFSKRRAGLFKKASELCTLCGAEIGIIVFSPAKKPFSFGHPS 122

Query: 63  FDSLFDCFLIKN 75
            +S+ D ++ +N
Sbjct: 123 VESVLDRYVSRN 134

[Close]

BLAST of Lcy05g019710 vs. ExPASy Swiss-Prot
Match: Q9LMM8 (Agamous-like MADS-box protein AGL28 OS=Arabidopsis thaliana OX=3702 GN=AGL28 PE=2 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 9.6e-11
Identity = 44/128 (34.38%), Postives = 71/128 (55.47%), Query Frame = 0


Query: 3   GRRKIEIKKIQKKSRQQVTFSKCCTGLFNKATKLSILYFAEIAILVFSPTRKIFTFSHPN 62
           GRRKIE+ K+  +S  QVTFSK  +GLF K ++L  L  AEIAI+VFSP+ K ++F HPN
Sbjct: 7   GRRKIELVKMTNESNLQVTFSKRRSGLFKKGSELCTLCDAEIAIIVFSPSGKAYSFGHPN 66

Query: 63  FDSLFDCFLIK-------NFHLSK--------HADTYVPLAKLNLDCHVRRQEDASRRDD 116
            + L D  L +       NF  S+        +      +A+   +   ++    + R++
Sbjct: 67  VNKLLDHSLGRVIRHNNTNFAESRTKLRIQMLNESLTEVMAEKEKEQETKQSIVQNEREN 126

[Close]

BLAST of Lcy05g019710 vs. ExPASy Swiss-Prot
Match: O64703 (Agamous-like MADS-box protein AGL29 OS=Arabidopsis thaliana OX=3702 GN=AGL29 PE=2 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 1.4e-09
Identity = 34/69 (49.28%), Postives = 50/69 (72.46%), Query Frame = 0


Query: 3  GRRKIEIKKIQKKSRQQVTFSKCCTGLFNKATKLSILYFAEIAILVFSPTRKIFTFSHPN 62
          GRRKI+++ +Q  + +QVTFSK  TGLF KA++L+ L  AE+ I+VFSP  K F++  PN
Sbjct: 2  GRRKIKMEMVQDMNTRQVTFSKRRTGLFKKASELATLCNAELGIVVFSPGGKPFSYGKPN 61

Query: 63 FDSLFDCFL 72
           DS+ + F+
Sbjct: 62 LDSVAERFM 70

[Close]

BLAST of Lcy05g019710 vs. ExPASy TrEMBL
Match: A0A5D3BKF4 (Aspartic proteinase CDR1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold123G00600 PE=3 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 6.9e-20
Identity = 59/91 (64.84%), Postives = 68/91 (74.73%), Query Frame = 0


Query: 3  GRRKIEIKKIQKKSRQQVTFSKCCTGLFNKATKLSILYFAEIAILVFSPTRKIFTFSHPN 62
          GR+KIEIKK+  KSR+QVTFSK   GLFNKA +LSIL  AEIAILVFS T KI+TF HPN
Sbjct: 6  GRQKIEIKKLNVKSRRQVTFSKRRAGLFNKAAELSILSGAEIAILVFSSTGKIYTFGHPN 65

Query: 63 FDSLFDCFLIKNFHLSKHADTYVPLAKLNLD 94
           D L D FL  NF  +K A+ Y+PL +LN D
Sbjct: 66 VDMLIDRFLTSNFVPTKPAEAYLPLEELNRD 96

[Close]

BLAST of Lcy05g019710 vs. ExPASy TrEMBL
Match: A0A5A7TV93 (Agamous-like MADS-box protein AGL62 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold243G003090 PE=4 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 6.9e-20
Identity = 59/91 (64.84%), Postives = 68/91 (74.73%), Query Frame = 0


Query: 3  GRRKIEIKKIQKKSRQQVTFSKCCTGLFNKATKLSILYFAEIAILVFSPTRKIFTFSHPN 62
          GR+KIEIKK+  KSR+QVTFSK   GLFNKA +LSIL  AEIAILVFS T KI+TF HPN
Sbjct: 6  GRQKIEIKKLNVKSRRQVTFSKRRAGLFNKAAELSILSGAEIAILVFSSTGKIYTFGHPN 65

Query: 63 FDSLFDCFLIKNFHLSKHADTYVPLAKLNLD 94
           D L D FL  NF  +K A+ Y+PL +LN D
Sbjct: 66 VDMLIDRFLTSNFVPTKPAEAYLPLEELNRD 96

[Close]

BLAST of Lcy05g019710 vs. ExPASy TrEMBL
Match: A0A1S3C5V9 (agamous-like MADS-box protein AGL62 OS=Cucumis melo OX=3656 GN=LOC103497390 PE=4 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 6.9e-20
Identity = 59/91 (64.84%), Postives = 68/91 (74.73%), Query Frame = 0


Query: 3  GRRKIEIKKIQKKSRQQVTFSKCCTGLFNKATKLSILYFAEIAILVFSPTRKIFTFSHPN 62
          GR+KIEIKK+  KSR+QVTFSK   GLFNKA +LSIL  AEIAILVFS T KI+TF HPN
Sbjct: 6  GRQKIEIKKLNVKSRRQVTFSKRRAGLFNKAAELSILSGAEIAILVFSSTGKIYTFGHPN 65

Query: 63 FDSLFDCFLIKNFHLSKHADTYVPLAKLNLD 94
           D L D FL  NF  +K A+ Y+PL +LN D
Sbjct: 66 VDMLIDRFLTSNFVPTKPAEAYLPLEELNRD 96

[Close]

BLAST of Lcy05g019710 vs. ExPASy TrEMBL
Match: A0A0A0LLS2 (Mads box protein OS=Cucumis sativus OX=3659 GN=Csa_2G277060 PE=4 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 2.6e-19
Identity = 63/117 (53.85%), Postives = 76/117 (64.96%), Query Frame = 0


Query: 3   GRRKIEIKKIQKKSRQQVTFSKCCTGLFNKATKLSILYFAEIAILVFSPTRKIFTFSHPN 62
           GR+KIEIKK+  KSR+QVTFSK   GLFNKA +LSIL  AEIAILVFS T KI+TF HPN
Sbjct: 6   GRQKIEIKKLNVKSRRQVTFSKRRAGLFNKAAELSILSGAEIAILVFSSTDKIYTFGHPN 65

Query: 63  FDSLFDCFLIKNFHLSKHADTYVPLAKLNLDC-HVRRQEDASRRDDEEVDE----WW 115
            D L D FL  NF   K  + Y+PL +LN D   V  + +  +R  E + +    WW
Sbjct: 66  VDFLIDRFLTSNFVPPKPVEAYLPLEELNRDLKDVTAEFETEKRRAERMRKTGGFWW 122

[Close]

BLAST of Lcy05g019710 vs. ExPASy TrEMBL
Match: A0A6J1DNR9 (agamous-like MADS-box protein AGL62 OS=Momordica charantia OX=3673 GN=LOC111022795 PE=4 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 2.6e-19
Identity = 62/117 (52.99%), Postives = 80/117 (68.38%), Query Frame = 0


Query: 2   EGRRKIEIKKIQKKSRQQVTFSKCCTGLFNKATKLSILYFAEIAILVFSPTRKIFTFSHP 61
           +GR+KIEIKK++KKS +QVTFSK  TGLF KA++LS+L  AE+AI+VFSP  K+F F HP
Sbjct: 5   QGRQKIEIKKLEKKSSKQVTFSKRRTGLFKKASELSVLCGAEVAIIVFSPNDKVFCFGHP 64

Query: 62  NFDSLFDCFLIKNFHLSKHADTYVPLAKLNLDC--HVRRQEDASRRDDEEV---DEW 114
           N D L D FL  N    K A++YVP+A+LN +    VR  E   RR  E +   +EW
Sbjct: 65  NVDLLLDRFLTGNSAPPKPAESYVPVAQLNREFADAVRELEAEKRRAAEVIRAAEEW 121

[Close]

BLAST of Lcy05g019710 vs. NCBI nr
Match: XP_038902722.1 (agamous-like MADS-box protein AGL62 [Benincasa hispida])

HSP 1 Score: 110.2 bits (274), Expect = 1.3e-20
Identity = 67/120 (55.83%), Postives = 79/120 (65.83%), Query Frame = 0


Query: 3   GRRKIEIKKIQKKSRQQVTFSKCCTGLFNKATKLSILYFAEIAILVFSPTRKIFTFSHPN 62
           GR+KIEIKK++ KSRQQVTFSK   GLFNKA +LSIL  AEIAILVFSPT KI+TF HPN
Sbjct: 6   GRQKIEIKKLEVKSRQQVTFSKRRAGLFNKAAELSILCGAEIAILVFSPTGKIYTFGHPN 65

Query: 63  FDSLFDCFLIKNFHLSKHADTYVPLAKLNLDCHVRRQE-DASRRDDEEVDE-------WW 115
            D L D  L  NF   K A++Y+PLA+LN D      E +  +R   EV+        WW
Sbjct: 66  VDLLLDRSLTANFAPPKPAESYLPLAELNRDFDDAMAEFEIEKRRAAEVERMRSSGGFWW 125

[Close]

BLAST of Lcy05g019710 vs. NCBI nr
Match: XP_008457781.1 (PREDICTED: agamous-like MADS-box protein AGL62 [Cucumis melo] >KAA0045787.1 agamous-like MADS-box protein AGL62 [Cucumis melo var. makuwa])

HSP 1 Score: 106.7 bits (265), Expect = 1.4e-19
Identity = 59/91 (64.84%), Postives = 68/91 (74.73%), Query Frame = 0


Query: 3  GRRKIEIKKIQKKSRQQVTFSKCCTGLFNKATKLSILYFAEIAILVFSPTRKIFTFSHPN 62
          GR+KIEIKK+  KSR+QVTFSK   GLFNKA +LSIL  AEIAILVFS T KI+TF HPN
Sbjct: 6  GRQKIEIKKLNVKSRRQVTFSKRRAGLFNKAAELSILSGAEIAILVFSSTGKIYTFGHPN 65

Query: 63 FDSLFDCFLIKNFHLSKHADTYVPLAKLNLD 94
           D L D FL  NF  +K A+ Y+PL +LN D
Sbjct: 66 VDMLIDRFLTSNFVPTKPAEAYLPLEELNRD 96

[Close]

BLAST of Lcy05g019710 vs. NCBI nr
Match: TYJ99494.1 (aspartic proteinase CDR1-like [Cucumis melo var. makuwa])

HSP 1 Score: 106.7 bits (265), Expect = 1.4e-19
Identity = 59/91 (64.84%), Postives = 68/91 (74.73%), Query Frame = 0


Query: 3  GRRKIEIKKIQKKSRQQVTFSKCCTGLFNKATKLSILYFAEIAILVFSPTRKIFTFSHPN 62
          GR+KIEIKK+  KSR+QVTFSK   GLFNKA +LSIL  AEIAILVFS T KI+TF HPN
Sbjct: 6  GRQKIEIKKLNVKSRRQVTFSKRRAGLFNKAAELSILSGAEIAILVFSSTGKIYTFGHPN 65

Query: 63 FDSLFDCFLIKNFHLSKHADTYVPLAKLNLD 94
           D L D FL  NF  +K A+ Y+PL +LN D
Sbjct: 66 VDMLIDRFLTSNFVPTKPAEAYLPLEELNRD 96

[Close]

BLAST of Lcy05g019710 vs. NCBI nr
Match: XP_022155748.1 (agamous-like MADS-box protein AGL62 [Momordica charantia])

HSP 1 Score: 104.8 bits (260), Expect = 5.4e-19
Identity = 62/117 (52.99%), Postives = 80/117 (68.38%), Query Frame = 0


Query: 2   EGRRKIEIKKIQKKSRQQVTFSKCCTGLFNKATKLSILYFAEIAILVFSPTRKIFTFSHP 61
           +GR+KIEIKK++KKS +QVTFSK  TGLF KA++LS+L  AE+AI+VFSP  K+F F HP
Sbjct: 5   QGRQKIEIKKLEKKSSKQVTFSKRRTGLFKKASELSVLCGAEVAIIVFSPNDKVFCFGHP 64

Query: 62  NFDSLFDCFLIKNFHLSKHADTYVPLAKLNLDC--HVRRQEDASRRDDEEV---DEW 114
           N D L D FL  N    K A++YVP+A+LN +    VR  E   RR  E +   +EW
Sbjct: 65  NVDLLLDRFLTGNSAPPKPAESYVPVAQLNREFADAVRELEAEKRRAAEVIRAAEEW 121

[Close]

BLAST of Lcy05g019710 vs. NCBI nr
Match: XP_004149713.1 (agamous-like MADS-box protein AGL62 [Cucumis sativus] >KGN61964.1 hypothetical protein Csa_006560 [Cucumis sativus])

HSP 1 Score: 104.8 bits (260), Expect = 5.4e-19
Identity = 63/117 (53.85%), Postives = 76/117 (64.96%), Query Frame = 0


Query: 3   GRRKIEIKKIQKKSRQQVTFSKCCTGLFNKATKLSILYFAEIAILVFSPTRKIFTFSHPN 62
           GR+KIEIKK+  KSR+QVTFSK   GLFNKA +LSIL  AEIAILVFS T KI+TF HPN
Sbjct: 6   GRQKIEIKKLNVKSRRQVTFSKRRAGLFNKAAELSILSGAEIAILVFSSTDKIYTFGHPN 65

Query: 63  FDSLFDCFLIKNFHLSKHADTYVPLAKLNLDC-HVRRQEDASRRDDEEVDE----WW 115
            D L D FL  NF   K  + Y+PL +LN D   V  + +  +R  E + +    WW
Sbjct: 66  VDFLIDRFLTSNFVPPKPVEAYLPLEELNRDLKDVTAEFETEKRRAERMRKTGGFWW 122

[Close]

BLAST of Lcy05g019710 vs. TAIR 10
Match: AT5G60440.1 (AGAMOUS-like 62 )

HSP 1 Score: 77.0 bits (188), Expect = 1.1e-14
Identity = 40/73 (54.79%), Postives = 55/73 (75.34%), Query Frame = 0


Query: 2  EGRRKIEIKKIQKKSRQQVTFSKCCTGLFNKATKLSILYFAEIAILVFSPTRKIFTFSHP 61
          +GR+KIE+ K++ +S  QVTFSK  +GLF KA++L  L  AE+AI+VFSP RK+F+F HP
Sbjct: 6  KGRQKIEMVKMKNESNLQVTFSKRRSGLFKKASELCTLCGAEVAIVVFSPGRKVFSFGHP 65

Query: 62 NFDSLFDCFLIKN 75
          N DS+ D F+  N
Sbjct: 66 NVDSVIDRFINNN 78

[Close]

BLAST of Lcy05g019710 vs. TAIR 10
Match: AT1G65360.1 (AGAMOUS-like 23 )

HSP 1 Score: 75.1 bits (183), Expect = 4.3e-14
Identity = 46/127 (36.22%), Postives = 68/127 (53.54%), Query Frame = 0


Query: 3   GRRKIEIKKIQKKSRQQVTFSKCCTGLFNKATKLSILYFAEIAILVFSPTRKIFTFSHPN 62
           GRRK+EI K+ K+S  QVTFSK   GLF KA++   L  A+IA++VFSP  K+F+F HPN
Sbjct: 7   GRRKVEIVKMTKESNLQVTFSKRKAGLFKKASEFCTLCDAKIAMIVFSPAGKVFSFGHPN 66

Query: 63  FDSLFDCF--------------LIKNFHLSKHADTYVPL-AKLNLDCHVRRQEDASRRDD 115
            D L D F                   H+     +Y  + A++  +   ++    + R++
Sbjct: 67  VDVLLDHFRGCVVGHNNTNLDESYTKLHVQMLNKSYTEVKAEVEKEQKNKQSRAQNEREN 126

[Close]

BLAST of Lcy05g019710 vs. TAIR 10
Match: AT2G24840.1 (AGAMOUS-like 61 )

HSP 1 Score: 70.9 bits (172), Expect = 8.0e-13
Identity = 37/72 (51.39%), Postives = 53/72 (73.61%), Query Frame = 0


Query: 3   GRRKIEIKKIQKKSRQQVTFSKCCTGLFNKATKLSILYFAEIAILVFSPTRKIFTFSHPN 62
           GR+KI + KI+K+S +QVTFSK   GLF KA++L  L  AEI I+VFSP +K F+F HP+
Sbjct: 63  GRQKIPMVKIKKESHRQVTFSKRRAGLFKKASELCTLCGAEIGIIVFSPAKKPFSFGHPS 122

Query: 63  FDSLFDCFLIKN 75
            +S+ D ++ +N
Sbjct: 123 VESVLDRYVSRN 134

[Close]

BLAST of Lcy05g019710 vs. TAIR 10
Match: AT1G01530.1 (AGAMOUS-like 28 )

HSP 1 Score: 67.8 bits (164), Expect = 6.8e-12
Identity = 44/128 (34.38%), Postives = 71/128 (55.47%), Query Frame = 0


Query: 3   GRRKIEIKKIQKKSRQQVTFSKCCTGLFNKATKLSILYFAEIAILVFSPTRKIFTFSHPN 62
           GRRKIE+ K+  +S  QVTFSK  +GLF K ++L  L  AEIAI+VFSP+ K ++F HPN
Sbjct: 7   GRRKIELVKMTNESNLQVTFSKRRSGLFKKGSELCTLCDAEIAIIVFSPSGKAYSFGHPN 66

Query: 63  FDSLFDCFLIK-------NFHLSK--------HADTYVPLAKLNLDCHVRRQEDASRRDD 116
            + L D  L +       NF  S+        +      +A+   +   ++    + R++
Sbjct: 67  VNKLLDHSLGRVIRHNNTNFAESRTKLRIQMLNESLTEVMAEKEKEQETKQSIVQNEREN 126

[Close]

BLAST of Lcy05g019710 vs. TAIR 10
Match: AT4G36590.1 (MADS-box transcription factor family protein )

HSP 1 Score: 65.9 bits (159), Expect = 2.6e-11
Identity = 39/98 (39.80%), Postives = 60/98 (61.22%), Query Frame = 0


Query: 2   EGRRKIEIKKIQKKSRQQVTFSKCCTGLFNKATKLSILYFAEIAILVFSPTRKIFTFSHP 61
           +GR+KIE+KK++ +S  QVTFSK   GLF KA++L  L  AEI ++VFSP  K+F+F HP
Sbjct: 6   KGRQKIEMKKMENESNLQVTFSKRRFGLFKKASELCTLSGAEILLIVFSPGGKVFSFGHP 65

Query: 62  NFDSLFDCFLIKNFH--LSKHADTYVPLAKLNLDCHVR 98
           +   L   F   N +  +  H +  + L +   D +++
Sbjct: 66  SVQELIHRFSNPNHNSAIVHHQNNNLQLVETRPDRNIQ 103

The following BLAST results are available for this feature:

BLAST of Lcy05g019710 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FKK2	1.6e-13	54.79	Agamous-like MADS-box protein AGL62 OS=Arabidopsis thaliana OX=3702 GN=AGL62 PE=...	[more]
O80807	6.0e-13	36.22	Agamous-like MADS-box protein AGL23 OS=Arabidopsis thaliana OX=3702 GN=AGL23 PE=...	[more]
Q4PSU4	1.1e-11	51.39	Agamous-like MADS-box protein AGL61 OS=Arabidopsis thaliana OX=3702 GN=AGL61 PE=...	[more]
Q9LMM8	9.6e-11	34.38	Agamous-like MADS-box protein AGL28 OS=Arabidopsis thaliana OX=3702 GN=AGL28 PE=...	[more]
O64703	1.4e-09	49.28	Agamous-like MADS-box protein AGL29 OS=Arabidopsis thaliana OX=3702 GN=AGL29 PE=...	[more]

BLAST of Lcy05g019710 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BKF4	6.9e-20	64.84	Aspartic proteinase CDR1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc...	[more]
A0A5A7TV93	6.9e-20	64.84	Agamous-like MADS-box protein AGL62 OS=Cucumis melo var. makuwa OX=1194695 GN=E6...	[more]
A0A1S3C5V9	6.9e-20	64.84	agamous-like MADS-box protein AGL62 OS=Cucumis melo OX=3656 GN=LOC103497390 PE=4...	[more]
A0A0A0LLS2	2.6e-19	53.85	Mads box protein OS=Cucumis sativus OX=3659 GN=Csa_2G277060 PE=4 SV=1	[more]
A0A6J1DNR9	2.6e-19	52.99	agamous-like MADS-box protein AGL62 OS=Momordica charantia OX=3673 GN=LOC1110227...	[more]

BLAST of Lcy05g019710 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038902722.1	1.3e-20	55.83	agamous-like MADS-box protein AGL62 [Benincasa hispida]	[more]
XP_008457781.1	1.4e-19	64.84	PREDICTED: agamous-like MADS-box protein AGL62 [Cucumis melo] >KAA0045787.1 agam...	[more]
TYJ99494.1	1.4e-19	64.84	aspartic proteinase CDR1-like [Cucumis melo var. makuwa]	[more]
XP_022155748.1	5.4e-19	52.99	agamous-like MADS-box protein AGL62 [Momordica charantia]	[more]
XP_004149713.1	5.4e-19	53.85	agamous-like MADS-box protein AGL62 [Cucumis sativus] >KGN61964.1 hypothetical p...	[more]

BLAST of Lcy05g019710 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G60440.1	1.1e-14	54.79	AGAMOUS-like 62	[more]
AT1G65360.1	4.3e-14	36.22	AGAMOUS-like 23	[more]
AT2G24840.1	8.0e-13	51.39	AGAMOUS-like 61	[more]
AT1G01530.1	6.8e-12	34.38	AGAMOUS-like 28	[more]
AT4G36590.1	2.6e-11	39.80	MADS-box transcription factor family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002100	Transcription factor, MADS-box	PRINTS	PR00404	MADSDOMAIN	coord: 24..39 score: 48.48 coord: 4..24 score: 52.1 coord: 39..60 score: 34.92
IPR002100	Transcription factor, MADS-box	SMART	SM00432	madsneu2	coord: 2..61 e-value: 2.1E-16 score: 70.5
IPR002100	Transcription factor, MADS-box	PFAM	PF00319	SRF-TF	coord: 11..58 e-value: 5.1E-16 score: 57.9
IPR002100	Transcription factor, MADS-box	PROSITE	PS50066	MADS_BOX_2	coord: 2..62 score: 20.646887
IPR036879	Transcription factor, MADS-box superfamily	GENE3D	3.40.1810.10		coord: 14..82 e-value: 7.7E-18 score: 66.1
IPR036879	Transcription factor, MADS-box superfamily	SUPERFAMILY	55455	SRF-like	coord: 3..71
None	No IPR available	PANTHER	PTHR11945:SF580	AGAMOUS-LIKE MADS-BOX PROTEIN AGL62	coord: 3..87
None	No IPR available	PANTHER	PTHR11945	MADS BOX PROTEIN	coord: 3..87

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy05g019710.1	Lcy05g019710.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006357	regulation of transcription by RNA polymerase II
cellular_component	GO:0072546	EMC complex
molecular_function	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific
molecular_function	GO:0008233	peptidase activity
molecular_function	GO:0046983	protein dimerization activity
molecular_function	GO:0000978	RNA polymerase II cis-regulatory region sequence-specific DNA binding
molecular_function	GO:0003677	DNA binding