Lcy05g019640 (gene) Sponge gourd (P93075) v1

Overview
NameLcy05g019640
Typegene
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionZinc CCHC-type-like protein
LocationChr05: 41681926 .. 41682540 (-)
RNA-Seq ExpressionLcy05g019640
SyntenyLcy05g019640
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAGTAGAAGAGATGATAAATGAATGGAAGAGGTTTAATCTGATGGAAGAAGAGAGTGAAGCGTTTATTACCTTAAACGCAGAAGAAGTGGATGTGATTAAAGGGCAGGTGGACCATTGCCTAGTTGGGAAACTCCTCACAAGCCGAACCATTTCAAAGATCACGATCAAGAATGCCCTGCAAGCTGCATGGAAAACAAGAAAAGAATTTAGTGTTGATATATTTAGTACAAATGTTTTCTTGTTTAAGTTTGAAAGCAAGGAGGACAAAGAGTGGATAATAGGTAACGGACCTTGGTTTTTTGACAGGAACTTGTTAGTTCTTGAAGCTCTAGAGGAAAACCAAAGAACAGTTGATCTGGAATTTAAAAAAGTTGATTTATGGTTAAGAATTTTGAATCTGCCAATAGGATATCGAAATGAAATGGTAGCAAGAAAGATTGGCAATAATATTGGAGAGTTCTTGGAGATGGATAAGGGAGAAAATAGAGGCATGTGGGGAAACAACATCAGAATTAAAGTTAAACTGGACATTTCAAGTCCTCTGCGAAGAGGTTTTATGCTTAAGATGGATGGAACTGAGGAGAAATATTGGATAACCATAACTCCATAA

mRNA sequence

ATGGAAGTAGAAGAGATGATAAATGAATGGAAGAGGTTTAATCTGATGGAAGAAGAGAGTGAAGCGTTTATTACCTTAAACGCAGAAGAAGTGGATGTGATTAAAGGGCAGGTGGACCATTGCCTAGTTGGGAAACTCCTCACAAGCCGAACCATTTCAAAGATCACGATCAAGAATGCCCTGCAAGCTGCATGGAAAACAAGAAAAGAATTTAGTGTTGATATATTTAGTACAAATGTTTTCTTGTTTAAGTTTGAAAGCAAGGAGGACAAAGAGTGGATAATAGGTAACGGACCTTGGTTTTTTGACAGGAACTTGTTAGTTCTTGAAGCTCTAGAGGAAAACCAAAGAACAGTTGATCTGGAATTTAAAAAAGTTGATTTATGGTTAAGAATTTTGAATCTGCCAATAGGATATCGAAATGAAATGGTAGCAAGAAAGATTGGCAATAATATTGGAGAGTTCTTGGAGATGGATAAGGGAGAAAATAGAGGCATGTGGGGAAACAACATCAGAATTAAAGTTAAACTGGACATTTCAAGTCCTCTGCGAAGAGGTTTTATGCTTAAGATGGATGGAACTGAGGAGAAATATTGGATAACCATAACTCCATAA

Coding sequence (CDS)

ATGGAAGTAGAAGAGATGATAAATGAATGGAAGAGGTTTAATCTGATGGAAGAAGAGAGTGAAGCGTTTATTACCTTAAACGCAGAAGAAGTGGATGTGATTAAAGGGCAGGTGGACCATTGCCTAGTTGGGAAACTCCTCACAAGCCGAACCATTTCAAAGATCACGATCAAGAATGCCCTGCAAGCTGCATGGAAAACAAGAAAAGAATTTAGTGTTGATATATTTAGTACAAATGTTTTCTTGTTTAAGTTTGAAAGCAAGGAGGACAAAGAGTGGATAATAGGTAACGGACCTTGGTTTTTTGACAGGAACTTGTTAGTTCTTGAAGCTCTAGAGGAAAACCAAAGAACAGTTGATCTGGAATTTAAAAAAGTTGATTTATGGTTAAGAATTTTGAATCTGCCAATAGGATATCGAAATGAAATGGTAGCAAGAAAGATTGGCAATAATATTGGAGAGTTCTTGGAGATGGATAAGGGAGAAAATAGAGGCATGTGGGGAAACAACATCAGAATTAAAGTTAAACTGGACATTTCAAGTCCTCTGCGAAGAGGTTTTATGCTTAAGATGGATGGAACTGAGGAGAAATATTGGATAACCATAACTCCATAA

Protein sequence

MEVEEMINEWKRFNLMEEESEAFITLNAEEVDVIKGQVDHCLVGKLLTSRTISKITIKNALQAAWKTRKEFSVDIFSTNVFLFKFESKEDKEWIIGNGPWFFDRNLLVLEALEENQRTVDLEFKKVDLWLRILNLPIGYRNEMVARKIGNNIGEFLEMDKGENRGMWGNNIRIKVKLDISSPLRRGFMLKMDGTEEKYWITITP
Homology
BLAST of Lcy05g019640 vs. ExPASy TrEMBL
Match: A0A6J1DU55 (uncharacterized protein LOC111023135 OS=Momordica charantia OX=3673 GN=LOC111023135 PE=4 SV=1)

HSP 1 Score: 148.7 bits (374), Expect = 2.7e-32
Identity = 71/202 (35.15%), Postives = 119/202 (58.91%), Query Frame = 0

Query: 1   MEVEEMINEWKRFNLMEEESEAFITLNAEEVDVIKGQVDHCLVGKLLTSRTISKITIKNA 60
           M+ E ++ +W++F L  EE E  + ++ + V + +  + + LVGKLL  R IS   +   
Sbjct: 1   MDHENLLADWQKFKLTSEEDEIAMDVDVDAVKMAEQGLAYSLVGKLLAKRIISADVLSRV 60

Query: 61  LQAAWKTRKEFSVDIFSTNVFLFKFESKEDKEWIIGNGPWFFDRNLLVLEALEENQRTVD 120
           L  AWK   + +V+    N+FLF F  + D   ++  GPWFFD+ L+VL+    ++   +
Sbjct: 61  LLLAWKVEHQLTVESIGKNLFLFHFCRECDMNRVMKTGPWFFDKALIVLQKPCSSKNISE 120

Query: 121 LEFKKVDLWLRILNLPIGYRNEMVARKIGNNIGEFLEMDKGENRGMWGNNIRIKVKLDIS 180
           LEF +V  W+ + +LP+ + N+ +A ++GN IG F+++D  E    WG ++RI+V +DI+
Sbjct: 121 LEFNRVAFWIHLFDLPMSWLNKTMAIRLGNAIGNFVDVDCNEKGFSWGASLRIRVLIDIT 180

Query: 181 SPLRRGFMLKMDGTEEKYWITI 203
            PLRRG  + +DG     WI I
Sbjct: 181 KPLRRGIKINIDGPMGGCWIPI 202

BLAST of Lcy05g019640 vs. ExPASy TrEMBL
Match: A0A6J1BSZ1 (uncharacterized protein LOC111005481 OS=Momordica charantia OX=3673 GN=LOC111005481 PE=4 SV=1)

HSP 1 Score: 145.6 bits (366), Expect = 2.3e-31
Identity = 70/203 (34.48%), Postives = 115/203 (56.65%), Query Frame = 0

Query: 1   MEVEEMINEWKRFNLMEEESEAFITLNAEEVDVIKGQVDHCLVGKLLTSRTISKITIKNA 60
           M    ++ EWK F L  EE +  + +++  ++     ++  L+ KLL+ R+IS   +KN 
Sbjct: 1   MAASNLLEEWKNFKLTSEEDKIAVDIDSSALEGTGKCLELSLICKLLSKRSISCTVLKNT 60

Query: 61  LQAAWKTR-KEFSVDIFSTNVFLFKFESKEDKEWIIGNGPWFFDRNLLVLEALEENQRTV 120
           L+ AWK   K FSVDI   N+FLF F    D+  I+  GPW FDR L++++      + +
Sbjct: 61  LKIAWKLDCKAFSVDIIGFNIFLFNFNRSSDRNRILRMGPWTFDRALIIIDNPVSLTKPL 120

Query: 121 DLEFKKVDLWLRILNLPIGYRNEMVARKIGNNIGEFLEMDKGENRGMWGNNIRIKVKLDI 180
           D++F+ V LW+   +L +   N+ +A ++GN IG F +++   N   WG+ +R++V+ D+
Sbjct: 121 DMDFRNVSLWVHFFDLSLACMNKTMATRLGNAIGLFEDVESNANNFCWGSCLRVRVRFDV 180

Query: 181 SSPLRRGFMLKMDGTEEKYWITI 203
             PL RG  L +DG     WI I
Sbjct: 181 MKPLHRGIKLNLDGPMGGCWIPI 203

BLAST of Lcy05g019640 vs. ExPASy TrEMBL
Match: A0A803LAB8 (Uncharacterized protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 4.3e-30
Identity = 72/200 (36.00%), Postives = 121/200 (60.50%), Query Frame = 0

Query: 4   EEMINEWKRFNLMEEESEAF-ITLNAEEVDVIKGQVDHCLVGKLLTSRTISKITIKNALQ 63
           ++++N++++F L EEES+      N+ + D  K Q+   LVGKLLT++  +   +K+ L 
Sbjct: 3   DDLLNDFEKFKLTEEESKVIGENANSVDDDGTKNQIALSLVGKLLTTKPFNVEAMKHTLT 62

Query: 64  AAWKTRKEFSVDIFSTNVFLFKFESKEDKEWIIGNGPWFFDRNLLVLEALEENQRTVDLE 123
           + WK +    + +   N+F+F+F ++ DKE +I   PWFFD  LLVL+ ++  ++  ++E
Sbjct: 63  SVWKLQGNVIIKMVEMNLFVFQFFNEADKEKVIDGCPWFFDGKLLVLKEIKGEEQPSEVE 122

Query: 124 FKKVDLWLRILNLPIGYRNEMVARKIGNNIGEFLEMDKGENRGMWGNNIRIKVKLDISSP 183
           FK   +W+R+L++P   RN+    +IG+ +G FLE D  +  G WG  +RIKV +DI+ P
Sbjct: 123 FKFAPMWVRLLDVPFNKRNKKTMTEIGDFLGCFLEADDSDPLG-WGEFLRIKVMIDIAKP 182

Query: 184 LRRGFMLKMDGTEEKYWITI 203
           LRRG  L   G     W+ +
Sbjct: 183 LRRGLFL-ATGPSSSKWVAL 200

BLAST of Lcy05g019640 vs. ExPASy TrEMBL
Match: A0A803L1E7 (Uncharacterized protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1)

HSP 1 Score: 140.6 bits (353), Expect = 7.4e-30
Identity = 71/203 (34.98%), Postives = 121/203 (59.61%), Query Frame = 0

Query: 4   EEMINEWKRFNLMEEESEAFITLNAEEVDVI----KGQVDHCLVGKLLTSRTISKITIKN 63
           EE++N+WK+  L +EE    + L  + V+ +    K Q+   LVGKL   +  +   +K 
Sbjct: 3   EELLNDWKKLRLTDEEE---VVLGGDYVETVTDDTKKQIQLTLVGKLWAVKPYNLEAMKR 62

Query: 64  ALQAAWKTRKEFSVDIFSTNVFLFKFESKEDKEWIIGNGPWFFDRNLLVLEALEENQRTV 123
            L   W+ +++F+V +  TN+F+F+F   EDKE ++   PWFFD  LL+L+ ++ +++  
Sbjct: 63  TLTNVWRLKEKFAVRVVETNLFVFQFFGIEDKERVMEGRPWFFDEKLLLLQEVQGDEQPS 122

Query: 124 DLEFKKVDLWLRILNLPIGYRNEMVARKIGNNIGEFLEMDKGENRGMWGNNIRIKVKLDI 183
           ++ FK   +W+R++++P   R   V   +G  +G F+EMD+ +  G WG  +RIK+ +DI
Sbjct: 123 EITFKNTPMWVRLMDVPFNKRLVAVMYDVGEFLGGFMEMDESDPIG-WGECMRIKILVDI 182

Query: 184 SSPLRRGFMLKMDGTEEKYWITI 203
           + PLRRG  L M G ++  WI I
Sbjct: 183 NKPLRRGLFLAM-GQKKSRWIDI 200

BLAST of Lcy05g019640 vs. ExPASy TrEMBL
Match: A0A6J1DX30 (uncharacterized protein LOC111024874 OS=Momordica charantia OX=3673 GN=LOC111024874 PE=4 SV=1)

HSP 1 Score: 139.0 bits (349), Expect = 2.1e-29
Identity = 74/203 (36.45%), Postives = 109/203 (53.69%), Query Frame = 0

Query: 1   MEVEEMINEWKRFNLMEEESEAFITLNAEEVDVIKGQVDHCLVGKLLTSRTISKITIKNA 60
           M   +++ EWK F L  EE E  I ++A        +++  LVGKL   R I+   +KN 
Sbjct: 1   MATFDLLEEWKNFKLTSEEEETAIDVDASAPATTGSRLEQILVGKLFIKRPITCPVMKNT 60

Query: 61  LQAAWKTRKE-FSVDIFSTNVFLFKFESKEDKEWIIGNGPWFFDRNLLVLEALEENQRTV 120
           ++ AWK     F V     N+FLF F    D+  I  +GPW FDR L+++          
Sbjct: 61  MRTAWKLENNAFEVQSLGYNLFLFSFARALDRNKIYKSGPWTFDRTLVLINKPVALIPPS 120

Query: 121 DLEFKKVDLWLRILNLPIGYRNEMVARKIGNNIGEFLEMDKGENRGMWGNNIRIKVKLDI 180
           +L+F K+ +W+R  +LP+G     +A ++GN +G F E D  +    WG+N+R++V LDI
Sbjct: 121 ELDFTKLPIWVRFFDLPLGCITRDMAIRLGNALGGFEEADCDDLNPDWGSNLRVRVMLDI 180

Query: 181 SSPLRRGFMLKMDGTEEKYWITI 203
           S PLRRG  L +DG     WI I
Sbjct: 181 SKPLRRGIKLNLDGPIGGAWIPI 203

BLAST of Lcy05g019640 vs. NCBI nr
Match: XP_022156185.1 (uncharacterized protein LOC111023135 [Momordica charantia] >XP_022156186.1 uncharacterized protein LOC111023135 [Momordica charantia])

HSP 1 Score: 148.7 bits (374), Expect = 5.6e-32
Identity = 71/202 (35.15%), Postives = 119/202 (58.91%), Query Frame = 0

Query: 1   MEVEEMINEWKRFNLMEEESEAFITLNAEEVDVIKGQVDHCLVGKLLTSRTISKITIKNA 60
           M+ E ++ +W++F L  EE E  + ++ + V + +  + + LVGKLL  R IS   +   
Sbjct: 1   MDHENLLADWQKFKLTSEEDEIAMDVDVDAVKMAEQGLAYSLVGKLLAKRIISADVLSRV 60

Query: 61  LQAAWKTRKEFSVDIFSTNVFLFKFESKEDKEWIIGNGPWFFDRNLLVLEALEENQRTVD 120
           L  AWK   + +V+    N+FLF F  + D   ++  GPWFFD+ L+VL+    ++   +
Sbjct: 61  LLLAWKVEHQLTVESIGKNLFLFHFCRECDMNRVMKTGPWFFDKALIVLQKPCSSKNISE 120

Query: 121 LEFKKVDLWLRILNLPIGYRNEMVARKIGNNIGEFLEMDKGENRGMWGNNIRIKVKLDIS 180
           LEF +V  W+ + +LP+ + N+ +A ++GN IG F+++D  E    WG ++RI+V +DI+
Sbjct: 121 LEFNRVAFWIHLFDLPMSWLNKTMAIRLGNAIGNFVDVDCNEKGFSWGASLRIRVLIDIT 180

Query: 181 SPLRRGFMLKMDGTEEKYWITI 203
            PLRRG  + +DG     WI I
Sbjct: 181 KPLRRGIKINIDGPMGGCWIPI 202

BLAST of Lcy05g019640 vs. NCBI nr
Match: XP_022132681.1 (uncharacterized protein LOC111005481 [Momordica charantia])

HSP 1 Score: 145.6 bits (366), Expect = 4.7e-31
Identity = 70/203 (34.48%), Postives = 115/203 (56.65%), Query Frame = 0

Query: 1   MEVEEMINEWKRFNLMEEESEAFITLNAEEVDVIKGQVDHCLVGKLLTSRTISKITIKNA 60
           M    ++ EWK F L  EE +  + +++  ++     ++  L+ KLL+ R+IS   +KN 
Sbjct: 1   MAASNLLEEWKNFKLTSEEDKIAVDIDSSALEGTGKCLELSLICKLLSKRSISCTVLKNT 60

Query: 61  LQAAWKTR-KEFSVDIFSTNVFLFKFESKEDKEWIIGNGPWFFDRNLLVLEALEENQRTV 120
           L+ AWK   K FSVDI   N+FLF F    D+  I+  GPW FDR L++++      + +
Sbjct: 61  LKIAWKLDCKAFSVDIIGFNIFLFNFNRSSDRNRILRMGPWTFDRALIIIDNPVSLTKPL 120

Query: 121 DLEFKKVDLWLRILNLPIGYRNEMVARKIGNNIGEFLEMDKGENRGMWGNNIRIKVKLDI 180
           D++F+ V LW+   +L +   N+ +A ++GN IG F +++   N   WG+ +R++V+ D+
Sbjct: 121 DMDFRNVSLWVHFFDLSLACMNKTMATRLGNAIGLFEDVESNANNFCWGSCLRVRVRFDV 180

Query: 181 SSPLRRGFMLKMDGTEEKYWITI 203
             PL RG  L +DG     WI I
Sbjct: 181 MKPLHRGIKLNLDGPMGGCWIPI 203

BLAST of Lcy05g019640 vs. NCBI nr
Match: XP_028122006.1 (uncharacterized protein LOC114319195 [Camellia sinensis])

HSP 1 Score: 141.7 bits (356), Expect = 6.8e-30
Identity = 63/180 (35.00%), Postives = 104/180 (57.78%), Query Frame = 0

Query: 16  MEEESEAFITLNAEEVDVIKGQVDHCLVGKLLTSRTISKITIKNALQAAWKTRKEFSVDI 75
           +  E +A + +  E   ++ G+ D CLVGKLLT R  +   +KN L + W+  K   V +
Sbjct: 14  LTSEEDAVVRIGGESTSLMMGKSDMCLVGKLLTRRPFNVEAMKNTLLSVWQPTKGMQVRV 73

Query: 76  FSTNVFLFKFESKEDKEWIIGNGPWFFDRNLLVLEALEENQRTVDLEFKKVDLWLRILNL 135
              N+F+F F    DK  ++ +GPW FD++LL+L  ++ N +  D++  +V  W+ + NL
Sbjct: 74  IGDNLFVFVFGHVVDKRRVLSDGPWTFDKHLLMLGEMDPNVQPSDIQLTRVQFWVHVCNL 133

Query: 136 PIGYRNEMVARKIGNNIGEFLEMDKGENRGMWGNNIRIKVKLDISSPLRRGFMLKMDGTE 195
           P+   N+ V   +GN +G+F++MD  +   +WG  +RI+V LD+  PLRRG  L +   E
Sbjct: 134 PLVLMNKKVGEIVGNAVGQFIDMDYEDGGIVWGRTMRIRVALDVRKPLRRGMKLALSSAE 193

BLAST of Lcy05g019640 vs. NCBI nr
Match: XP_022158377.1 (uncharacterized protein LOC111024874 [Momordica charantia])

HSP 1 Score: 139.0 bits (349), Expect = 4.4e-29
Identity = 74/203 (36.45%), Postives = 109/203 (53.69%), Query Frame = 0

Query: 1   MEVEEMINEWKRFNLMEEESEAFITLNAEEVDVIKGQVDHCLVGKLLTSRTISKITIKNA 60
           M   +++ EWK F L  EE E  I ++A        +++  LVGKL   R I+   +KN 
Sbjct: 1   MATFDLLEEWKNFKLTSEEEETAIDVDASAPATTGSRLEQILVGKLFIKRPITCPVMKNT 60

Query: 61  LQAAWKTRKE-FSVDIFSTNVFLFKFESKEDKEWIIGNGPWFFDRNLLVLEALEENQRTV 120
           ++ AWK     F V     N+FLF F    D+  I  +GPW FDR L+++          
Sbjct: 61  MRTAWKLENNAFEVQSLGYNLFLFSFARALDRNKIYKSGPWTFDRTLVLINKPVALIPPS 120

Query: 121 DLEFKKVDLWLRILNLPIGYRNEMVARKIGNNIGEFLEMDKGENRGMWGNNIRIKVKLDI 180
           +L+F K+ +W+R  +LP+G     +A ++GN +G F E D  +    WG+N+R++V LDI
Sbjct: 121 ELDFTKLPIWVRFFDLPLGCITRDMAIRLGNALGGFEEADCDDLNPDWGSNLRVRVMLDI 180

Query: 181 SSPLRRGFMLKMDGTEEKYWITI 203
           S PLRRG  L +DG     WI I
Sbjct: 181 SKPLRRGIKLNLDGPIGGAWIPI 203

BLAST of Lcy05g019640 vs. NCBI nr
Match: XP_028124075.1 (uncharacterized protein LOC114321128 [Camellia sinensis])

HSP 1 Score: 139.0 bits (349), Expect = 4.4e-29
Identity = 61/180 (33.89%), Postives = 103/180 (57.22%), Query Frame = 0

Query: 16  MEEESEAFITLNAEEVDVIKGQVDHCLVGKLLTSRTISKITIKNALQAAWKTRKEFSVDI 75
           +  E +A + +  +   ++ G+ D CLVGKLLT R  +   +KN L + W+  K   V +
Sbjct: 14  LTSEEDAVVRIGGDSTSLMMGKSDMCLVGKLLTRRPFNVEAMKNTLLSVWQPTKGMQVRV 73

Query: 76  FSTNVFLFKFESKEDKEWIIGNGPWFFDRNLLVLEALEENQRTVDLEFKKVDLWLRILNL 135
              N+F+F F    DK  ++ NGPW FD++LL+L  ++ N +  D++   V  W+ + NL
Sbjct: 74  IGDNLFVFVFGHVVDKRRVLSNGPWTFDKHLLMLGEMDPNVQPSDIQLTGVQFWVHVCNL 133

Query: 136 PIGYRNEMVARKIGNNIGEFLEMDKGENRGMWGNNIRIKVKLDISSPLRRGFMLKMDGTE 195
           P+   N+ V + +GN +G+F++MD  +    WG  +RI+V +D+  PLRRG  L +   +
Sbjct: 134 PLVLMNKQVGQIVGNAVGQFIDMDYEDGGIAWGRTMRIRVAIDVRKPLRRGMKLALSSAD 193

BLAST of Lcy05g019640 vs. TAIR 10
Match: AT5G36228.1 (nucleic acid binding;zinc ion binding )

HSP 1 Score: 63.2 bits (152), Expect = 2.9e-10
Identity = 47/181 (25.97%), Postives = 81/181 (44.75%), Query Frame = 0

Query: 4   EEMINEWKRFNLMEEESEAFITLNAEEVDVIKGQVDHCLVGKLLTSRTISKITIKNALQA 63
           +E+ N  +  +L  EE E +I  +A    +   ++   L+G++L  +T S       L  
Sbjct: 3   DELWNAIQHMDLGREEPELYIPYHAYVGALASNRLS--LLGRILNPQTQSVERAILELPY 62

Query: 64  AWKTRKEFSVDIFSTNVFLFKFESKEDKEWIIGNGPWFFDRNLLVLEALEENQRTVDLEF 123
            W    +    I     F  +F S+ D    +   PW F+   + L+  E+      L F
Sbjct: 63  QWGLGTQVHGRILDDRCFQVRFRSEIDLLNGLRRAPWVFNEWFIALQRWEDFPTEDFLTF 122

Query: 124 KKVDLWLRILNLPIGYRNEMVARKIGNNIGEFLEMDKGENRGMWGNNIRIKVKLDISSPL 183
             +D+W+ I  +P+ Y +E     I + +GE + MD  E        IR+KV++D + PL
Sbjct: 123 --IDVWVHIRGIPLPYVSERTVEIIASTLGEVVAMDFNEETTSQITFIRVKVRMDFTEPL 179

Query: 184 R 185
           R
Sbjct: 183 R 179

BLAST of Lcy05g019640 vs. TAIR 10
Match: AT2G41590.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G25200.1); Has 221 Blast hits to 217 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 221; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 50.1 bits (118), Expect = 2.5e-06
Identity = 40/181 (22.10%), Postives = 76/181 (41.99%), Query Frame = 0

Query: 4   EEMINEWKRFNLMEEESEAFITLNAEEVDVIKGQVDHCLVGKLLTSRTISKITIKNALQA 63
           +E+ NE +   L +E+   FI    E   +++      ++ + L  R  +  ++  AL  
Sbjct: 3   DELWNEIQNLELGQEDPALFIP--HEAYVMVEATNRLSMIARPLNPRVQNLNSVVVALPR 62

Query: 64  AWKTRKEFSVDIFSTNVFLFKFESKEDKEWIIGNGPWFFDRNLLVLEALEENQRTVDLEF 123
            W    +    I       F F+++ D   +    PW F  N   + A            
Sbjct: 63  TWGLTNQVHGRILDATYVQFLFQNEIDLMMVQRKEPWLF--NNWFVAATRWEVAPAHNFV 122

Query: 124 KKVDLWLRILNLPIGYRNEMVARKIGNNIGEFLEMDKGENRGMWGNNIRIKVKLDISSPL 183
             +DLW++I  +P+ Y +E    +I  ++GE L +D  +   +    IR++V+  I+  L
Sbjct: 123 TTIDLWVQIRGIPLPYVSEETVMEIAQDLGEVLMLDYHDTTSIQIAYIRVRVRFGITDRL 179

Query: 184 R 185
           R
Sbjct: 183 R 179

BLAST of Lcy05g019640 vs. TAIR 10
Match: AT2G02103.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G25200.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 48.1 bits (113), Expect = 9.6e-06
Identity = 40/181 (22.10%), Postives = 77/181 (42.54%), Query Frame = 0

Query: 4   EEMINEWKRFNLMEEESEAFITLNAEEVDVIKGQVDHCLVGKLLTSRTISKITIKNALQA 63
           +E+ +E +   L +E+   FI    E   +++   +  L+ + L  R  +  ++  AL  
Sbjct: 3   DELWDEIQNLELGQEDPALFIP--HEAYVMVEASNNLSLIARPLNPRVQNLNSVVVALPR 62

Query: 64  AWKTRKEFSVDIFSTNVFLFKFESKEDKEWIIGNGPWFFDRNLLVLEALEENQRTVDLEF 123
           +W    +    I       F F ++ D   +    PW F  N   + A            
Sbjct: 63  SWGLTTQVHGRILDATYVQFLFANEIDLLMVQRREPWLF--NNWFVAATRWQVAPAHNLV 122

Query: 124 KKVDLWLRILNLPIGYRNEMVARKIGNNIGEFLEMDKGENRGMWGNNIRIKVKLDISSPL 183
             +DLW++I  +P+ Y +E    +I +++GE + +D  E        IR++V+  I+  L
Sbjct: 123 TTIDLWVQIRGIPLPYVSEETVMEIAHDLGEIISLDFHEATSPQIAFIRVRVRFGITDRL 179

Query: 184 R 185
           R
Sbjct: 183 R 179

BLAST of Lcy05g019640 vs. TAIR 10
Match: AT5G25200.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G18636.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 47.4 bits (111), Expect = 1.6e-05
Identity = 39/181 (21.55%), Postives = 76/181 (41.99%), Query Frame = 0

Query: 4   EEMINEWKRFNLMEEESEAFITLNAEEVDVIKGQVDHCLVGKLLTSRTISKITIKNALQA 63
           +E+ +E +   L +E+   FI    E   +++   +  L+ + L  R  +  ++  AL  
Sbjct: 3   DELWDEIQNLELGQEDPALFIP--HEAYVMVEASNNLSLIARPLNPRVQNLNSVVVALPR 62

Query: 64  AWKTRKEFSVDIFSTNVFLFKFESKEDKEWIIGNGPWFFDRNLLVLEALEENQRTVDLEF 123
           +W    +    +       F F ++ D   +    PW F  N   + A            
Sbjct: 63  SWGLTTQVHGRVLDATYVQFLFANEIDLMMVQRREPWLF--NNWFVAATRWQVAPAHNLV 122

Query: 124 KKVDLWLRILNLPIGYRNEMVARKIGNNIGEFLEMDKGENRGMWGNNIRIKVKLDISSPL 183
             +DLW++I  +P+ Y +E    +I  ++GE + +D  E        IR++V+  I+  L
Sbjct: 123 TTIDLWVQIRGIPLPYVSEETVLEIAQDLGEIISLDFHEATSPQIAFIRVRVRFGITDRL 179

Query: 184 R 185
           R
Sbjct: 183 R 179

BLAST of Lcy05g019640 vs. TAIR 10
Match: AT5G18636.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G25200.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 47.4 bits (111), Expect = 1.6e-05
Identity = 39/181 (21.55%), Postives = 76/181 (41.99%), Query Frame = 0

Query: 4   EEMINEWKRFNLMEEESEAFITLNAEEVDVIKGQVDHCLVGKLLTSRTISKITIKNALQA 63
           +E+ +E +   L +E+   FI    E   +++   +  L+ + L  R  +  ++  AL  
Sbjct: 3   DELWDEIQNLELGQEDPALFIP--HEAYVMVEASNNLSLIARPLNPRVQNLNSVVVALPR 62

Query: 64  AWKTRKEFSVDIFSTNVFLFKFESKEDKEWIIGNGPWFFDRNLLVLEALEENQRTVDLEF 123
           +W    +    +       F F ++ D   +    PW F  N   + A            
Sbjct: 63  SWGLTTQVHGRVLDATYVQFVFANEIDLMMVQRREPWLF--NNWFVAATRWQVAPAHNLV 122

Query: 124 KKVDLWLRILNLPIGYRNEMVARKIGNNIGEFLEMDKGENRGMWGNNIRIKVKLDISSPL 183
             +DLW++I  +P+ Y +E    +I  ++GE + +D  E        IR++V+  I+  L
Sbjct: 123 TTIDLWVQIRGIPLPYVSEETVLEIAQDLGEIISLDFHEATSPQIAFIRVRVRFGITDRL 179

Query: 184 R 185
           R
Sbjct: 183 R 179

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1DU552.7e-3235.15uncharacterized protein LOC111023135 OS=Momordica charantia OX=3673 GN=LOC111023... [more]
A0A6J1BSZ12.3e-3134.48uncharacterized protein LOC111005481 OS=Momordica charantia OX=3673 GN=LOC111005... [more]
A0A803LAB84.3e-3036.00Uncharacterized protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1[more]
A0A803L1E77.4e-3034.98Uncharacterized protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1[more]
A0A6J1DX302.1e-2936.45uncharacterized protein LOC111024874 OS=Momordica charantia OX=3673 GN=LOC111024... [more]
Match NameE-valueIdentityDescription
XP_022156185.15.6e-3235.15uncharacterized protein LOC111023135 [Momordica charantia] >XP_022156186.1 uncha... [more]
XP_022132681.14.7e-3134.48uncharacterized protein LOC111005481 [Momordica charantia][more]
XP_028122006.16.8e-3035.00uncharacterized protein LOC114319195 [Camellia sinensis][more]
XP_022158377.14.4e-2936.45uncharacterized protein LOC111024874 [Momordica charantia][more]
XP_028124075.14.4e-2933.89uncharacterized protein LOC114321128 [Camellia sinensis][more]
Match NameE-valueIdentityDescription
AT5G36228.12.9e-1025.97nucleic acid binding;zinc ion binding [more]
AT2G41590.12.5e-0622.10unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT2G02103.19.6e-0622.10unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT5G25200.11.6e-0521.55unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT5G18636.11.6e-0521.55unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR025558Domain of unknown function DUF4283PFAMPF14111DUF4283coord: 35..175
e-value: 3.9E-31
score: 107.5
NoneNo IPR availablePANTHERPTHR31286:SF84SUBFAMILY NOT NAMEDcoord: 12..195
IPR040256Uncharacterized protein At4g02000-likePANTHERPTHR31286GLYCINE-RICH CELL WALL STRUCTURAL PROTEIN 1.8-LIKEcoord: 12..195

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lcy05g019640.1Lcy05g019640.1mRNA