Lcy05g019420 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy05g019420
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	myb-like transcription factor family protein
Location	Chr05: 41008066 .. 41008463 (+)
RNA-Seq Expression	Lcy05g019420
Synteny	Lcy05g019420

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACCCCAATCTCCGATCCCTTTCCTGTTAATTTGACCGTCAAGAACGGCGGCAACAGAGCTGCTGTTTCTGGGTTGTCTTCGCCGGCAGCGCAAGTGAAAGGACAGACAAAATTGTCCCAACAGCAACAGACCATAAGAAAACAGAGAATATGCTGGTCGCCGGAGCTCCACCGGCGCTTCGTCGACGCACTGCACCGACTCGGCGGATCTCAAGGTTCGAAAGTTTTACAACTTTTAACCATCAGAACTTTCAAATCGAAGAATCTAATTATTGATCGATCTATTTCAATTTTGCAGTGGCAACACCAAAACAGATAATGGAATTGATGCAAGTGGACGGCCTCACCAACGACGAAGTGAAAAGCCATTTACAAGTACGATTAACAAAAAAATAA

mRNA sequence

ATGACCCCAATCTCCGATCCCTTTCCTGTTAATTTGACCGTCAAGAACGGCGGCAACAGAGCTGCTGTTTCTGGGTTGTCTTCGCCGGCAGCGCAAGTGAAAGGACAGACAAAATTGTCCCAACAGCAACAGACCATAAGAAAACAGAGAATATGCTGGTCGCCGGAGCTCCACCGGCGCTTCGTCGACGCACTGCACCGACTCGGCGGATCTCAAGTGGCAACACCAAAACAGATAATGGAATTGATGCAAGTGGACGGCCTCACCAACGACGAAGTGAAAAGCCATTTACAAGTACGATTAACAAAAAAATAA

Coding sequence (CDS)

ATGACCCCAATCTCCGATCCCTTTCCTGTTAATTTGACCGTCAAGAACGGCGGCAACAGAGCTGCTGTTTCTGGGTTGTCTTCGCCGGCAGCGCAAGTGAAAGGACAGACAAAATTGTCCCAACAGCAACAGACCATAAGAAAACAGAGAATATGCTGGTCGCCGGAGCTCCACCGGCGCTTCGTCGACGCACTGCACCGACTCGGCGGATCTCAAGTGGCAACACCAAAACAGATAATGGAATTGATGCAAGTGGACGGCCTCACCAACGACGAAGTGAAAAGCCATTTACAAGTACGATTAACAAAAAAATAA

Protein sequence

MTPISDPFPVNLTVKNGGNRAAVSGLSSPAAQVKGQTKLSQQQQTIRKQRICWSPELHRRFVDALHRLGGSQVATPKQIMELMQVDGLTNDEVKSHLQVRLTKK

Homology

[Close]

BLAST of Lcy05g019420 vs. ExPASy Swiss-Prot
Match: Q9FPE8 (Transcription factor HHO3 OS=Arabidopsis thaliana OX=3702 GN=HHO3 PE=1 SV=1)

HSP 1 Score: 95.1 bits (235), Expect = 4.9e-19
Identity = 50/74 (67.57%), Postives = 58/74 (78.38%), Query Frame = 0


Query: 27  SSPAAQVKGQTKLSQQQQ--TIRKQRICWSPELHRRFVDALHRLGGSQVATPKQIMELMQ 86
           SS A  V G  +  +Q+Q  + RKQR CWSPELHRRF+ AL +LGGS VATPKQI +LM+
Sbjct: 186 SSTAETVGGGKEFEEQKQSHSNRKQRRCWSPELHRRFLHALQQLGGSHVATPKQIRDLMK 245

Query: 87  VDGLTNDEVKSHLQ 99
           VDGLTNDEVKSHLQ
Sbjct: 246 VDGLTNDEVKSHLQ 259

[Close]

BLAST of Lcy05g019420 vs. ExPASy Swiss-Prot
Match: Q5VRW2 (Transcription factor NIGTH1 OS=Oryza sativa subsp. japonica OX=39947 GN=NHO1 PE=1 SV=2)

HSP 1 Score: 94.0 bits (232), Expect = 1.1e-18
Identity = 51/80 (63.75%), Postives = 58/80 (72.50%), Query Frame = 0


Query: 19  NRAAVSGLSSPAAQVKGQTKLSQQQQTIRKQRICWSPELHRRFVDALHRLGGSQVATPKQ 78
           +R A +G   P+    GQ  +    Q  RK R CWSPELHRRFV+AL  LGG+QVATPKQ
Sbjct: 238 SREAQNGGKPPSTPSDGQA-VPPPPQPHRKARRCWSPELHRRFVNALQILGGAQVATPKQ 297

Query: 79  IMELMQVDGLTNDEVKSHLQ 99
           I ELM+VDGLTNDEVKSHLQ
Sbjct: 298 IRELMKVDGLTNDEVKSHLQ 316

[Close]

BLAST of Lcy05g019420 vs. ExPASy Swiss-Prot
Match: Q9ZQ85 (Myb family transcription factor EFM OS=Arabidopsis thaliana OX=3702 GN=EFM PE=1 SV=2)

HSP 1 Score: 93.6 bits (231), Expect = 1.4e-18
Identity = 46/59 (77.97%), Postives = 49/59 (83.05%), Query Frame = 0


Query: 40  SQQQQTIRKQRICWSPELHRRFVDALHRLGGSQVATPKQIMELMQVDGLTNDEVKSHLQ 99
           S   Q+ RK R CWSP+LHRRFV AL  LGGSQVATPKQI ELM+VDGLTNDEVKSHLQ
Sbjct: 225 STTSQSNRKARRCWSPDLHRRFVQALQMLGGSQVATPKQIRELMKVDGLTNDEVKSHLQ 283

[Close]

BLAST of Lcy05g019420 vs. ExPASy Swiss-Prot
Match: Q8VZS3 (Transcription factor HHO2 OS=Arabidopsis thaliana OX=3702 GN=HHO2 PE=1 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 4.1e-18
Identity = 46/66 (69.70%), Postives = 54/66 (81.82%), Query Frame = 0


Query: 36  QTKLSQQQ---QTIRKQRICWSPELHRRFVDALHRLGGSQVATPKQIMELMQVDGLTNDE 95
           + ++ QQQ    T RKQR CWSPELHRRF++AL +LGGS VATPKQI + M+VDGLTNDE
Sbjct: 200 ERRIEQQQSQSHTHRKQRRCWSPELHRRFLNALQQLGGSHVATPKQIRDHMKVDGLTNDE 259

Query: 96  VKSHLQ 99
           VKSHLQ
Sbjct: 260 VKSHLQ 265

[Close]

BLAST of Lcy05g019420 vs. ExPASy Swiss-Prot
Match: Q6Z869 (Transcription factor NIGT1 OS=Oryza sativa subsp. japonica OX=39947 GN=NIGT1 PE=2 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 4.1e-18
Identity = 44/57 (77.19%), Postives = 48/57 (84.21%), Query Frame = 0


Query: 42  QQQTIRKQRICWSPELHRRFVDALHRLGGSQVATPKQIMELMQVDGLTNDEVKSHLQ 99
           Q Q  RK R CW+PELHRRF+ AL +LGGS VATPKQI ELM+VDGLTNDEVKSHLQ
Sbjct: 229 QSQPHRKPRRCWAPELHRRFLQALQQLGGSHVATPKQIRELMKVDGLTNDEVKSHLQ 285

[Close]

BLAST of Lcy05g019420 vs. ExPASy TrEMBL
Match: A0A6J1BXV9 (transcription factor HHO5 OS=Momordica charantia OX=3673 GN=LOC111005725 PE=4 SV=1)

HSP 1 Score: 182.2 bits (461), Expect = 1.1e-42
Identity = 94/106 (88.68%), Postives = 96/106 (90.57%), Query Frame = 0


Query: 1   MTPISDPFPVNLTVKNGGN--RAAVSGLSSPAAQVKGQTKLSQQQQTIRKQRICWSPELH 60
           MTPISDPFPVNLTVKN G   RAAV GLSSPAAQ+K QTKLSQQQQTIRKQR CWSPELH
Sbjct: 188 MTPISDPFPVNLTVKNSGRGARAAVPGLSSPAAQIKAQTKLSQQQQTIRKQRRCWSPELH 247

Query: 61  RRFVDALHRLGGSQVATPKQIMELMQVDGLTNDEVKSHLQVRLTKK 105
           RRFVDALHRLGGSQVATPKQI ELMQVDGLTNDEVKSHLQVR+  K
Sbjct: 248 RRFVDALHRLGGSQVATPKQIRELMQVDGLTNDEVKSHLQVRIKNK 293

[Close]

BLAST of Lcy05g019420 vs. ExPASy TrEMBL
Match: A0A1S3B0P5 (uncharacterized protein LOC103484758 OS=Cucumis melo OX=3656 GN=LOC103484758 PE=4 SV=1)

HSP 1 Score: 180.6 bits (457), Expect = 3.3e-42
Identity = 93/103 (90.29%), Postives = 94/103 (91.26%), Query Frame = 0


Query: 1   MTPISDPFPVNLTVKNGGN-----RAAVSGLSSPAAQVKGQTKLSQQQQTIRKQRICWSP 60
           MTPISDPFPVNLTVKNGGN     RAAVSGLSSPA Q+KGQ KLSQQQQTIRKQR CWSP
Sbjct: 191 MTPISDPFPVNLTVKNGGNGGRNGRAAVSGLSSPAGQMKGQAKLSQQQQTIRKQRRCWSP 250

Query: 61  ELHRRFVDALHRLGGSQVATPKQIMELMQVDGLTNDEVKSHLQ 99
           ELHRRFVDALHRLGGSQVATPKQI ELMQVDGLTNDEVKSHLQ
Sbjct: 251 ELHRRFVDALHRLGGSQVATPKQIRELMQVDGLTNDEVKSHLQ 293

[Close]

BLAST of Lcy05g019420 vs. ExPASy TrEMBL
Match: A0A0A0KIA9 (HTH myb-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G490190 PE=4 SV=1)

HSP 1 Score: 180.3 bits (456), Expect = 4.3e-42
Identity = 93/103 (90.29%), Postives = 94/103 (91.26%), Query Frame = 0


Query: 1   MTPISDPFPVNLTVKNGGN-----RAAVSGLSSPAAQVKGQTKLSQQQQTIRKQRICWSP 60
           MTPISDPFPVNLTVKNGGN     RAAVSGLSSPA Q+KGQ KLSQQQQTIRKQR CWSP
Sbjct: 191 MTPISDPFPVNLTVKNGGNGGRNGRAAVSGLSSPAGQMKGQPKLSQQQQTIRKQRRCWSP 250

Query: 61  ELHRRFVDALHRLGGSQVATPKQIMELMQVDGLTNDEVKSHLQ 99
           ELHRRFVDALHRLGGSQVATPKQI ELMQVDGLTNDEVKSHLQ
Sbjct: 251 ELHRRFVDALHRLGGSQVATPKQIRELMQVDGLTNDEVKSHLQ 293

[Close]

BLAST of Lcy05g019420 vs. ExPASy TrEMBL
Match: A0A6J1HHJ1 (transcription factor HHO5-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111463537 PE=4 SV=1)

HSP 1 Score: 173.3 bits (438), Expect = 5.2e-40
Identity = 90/107 (84.11%), Postives = 95/107 (88.79%), Query Frame = 0


Query: 1   MTPISDPFPVNLTVKNG---GNRAAVSGLSSPAAQVKGQTKLSQQQQTIRKQRICWSPEL 60
           MTPISDPF  NLT+KNG   G+ A+VSGLSSPAAQ+ G  KLSQ QQTIRKQR CWSPEL
Sbjct: 192 MTPISDPFSGNLTLKNGTARGSSASVSGLSSPAAQITGHPKLSQHQQTIRKQRRCWSPEL 251

Query: 61  HRRFVDALHRLGGSQVATPKQIMELMQVDGLTNDEVKSHLQVRLTKK 105
           HRRFVDALHRLGGSQVATPKQI ELMQVDGLTNDEVKSHLQVRLT+K
Sbjct: 252 HRRFVDALHRLGGSQVATPKQIRELMQVDGLTNDEVKSHLQVRLTQK 298

[Close]

BLAST of Lcy05g019420 vs. ExPASy TrEMBL
Match: A0A6J1KS63 (transcription factor HHO5-like OS=Cucurbita maxima OX=3661 GN=LOC111497148 PE=4 SV=1)

HSP 1 Score: 166.4 bits (420), Expect = 6.4e-38
Identity = 85/101 (84.16%), Postives = 89/101 (88.12%), Query Frame = 0


Query: 1   MTPISDPFPVNLTVKNG---GNRAAVSGLSSPAAQVKGQTKLSQQQQTIRKQRICWSPEL 60
           MTPISDPF  NLT+KNG   G+ A+VSGLSSPAAQ+ G  KLSQ QQTIRKQR CWSPEL
Sbjct: 192 MTPISDPFSANLTLKNGTARGSSASVSGLSSPAAQITGHAKLSQHQQTIRKQRRCWSPEL 251

Query: 61  HRRFVDALHRLGGSQVATPKQIMELMQVDGLTNDEVKSHLQ 99
           HRRFVDALHRLGGSQVATPKQI ELMQVDGLTNDEVKSHLQ
Sbjct: 252 HRRFVDALHRLGGSQVATPKQIRELMQVDGLTNDEVKSHLQ 292

[Close]

BLAST of Lcy05g019420 vs. NCBI nr
Match: XP_022133033.1 (transcription factor HHO5 [Momordica charantia])

HSP 1 Score: 182.2 bits (461), Expect = 2.3e-42
Identity = 94/106 (88.68%), Postives = 96/106 (90.57%), Query Frame = 0


Query: 1   MTPISDPFPVNLTVKNGGN--RAAVSGLSSPAAQVKGQTKLSQQQQTIRKQRICWSPELH 60
           MTPISDPFPVNLTVKN G   RAAV GLSSPAAQ+K QTKLSQQQQTIRKQR CWSPELH
Sbjct: 188 MTPISDPFPVNLTVKNSGRGARAAVPGLSSPAAQIKAQTKLSQQQQTIRKQRRCWSPELH 247

Query: 61  RRFVDALHRLGGSQVATPKQIMELMQVDGLTNDEVKSHLQVRLTKK 105
           RRFVDALHRLGGSQVATPKQI ELMQVDGLTNDEVKSHLQVR+  K
Sbjct: 248 RRFVDALHRLGGSQVATPKQIRELMQVDGLTNDEVKSHLQVRIKNK 293

[Close]

BLAST of Lcy05g019420 vs. NCBI nr
Match: XP_008440244.1 (PREDICTED: uncharacterized protein LOC103484758 [Cucumis melo])

HSP 1 Score: 180.6 bits (457), Expect = 6.7e-42
Identity = 93/103 (90.29%), Postives = 94/103 (91.26%), Query Frame = 0


Query: 1   MTPISDPFPVNLTVKNGGN-----RAAVSGLSSPAAQVKGQTKLSQQQQTIRKQRICWSP 60
           MTPISDPFPVNLTVKNGGN     RAAVSGLSSPA Q+KGQ KLSQQQQTIRKQR CWSP
Sbjct: 191 MTPISDPFPVNLTVKNGGNGGRNGRAAVSGLSSPAGQMKGQAKLSQQQQTIRKQRRCWSP 250

Query: 61  ELHRRFVDALHRLGGSQVATPKQIMELMQVDGLTNDEVKSHLQ 99
           ELHRRFVDALHRLGGSQVATPKQI ELMQVDGLTNDEVKSHLQ
Sbjct: 251 ELHRRFVDALHRLGGSQVATPKQIRELMQVDGLTNDEVKSHLQ 293

[Close]

BLAST of Lcy05g019420 vs. NCBI nr
Match: XP_004141926.1 (transcription factor HHO5 [Cucumis sativus] >KGN48504.1 hypothetical protein Csa_004116 [Cucumis sativus])

HSP 1 Score: 180.3 bits (456), Expect = 8.8e-42
Identity = 93/103 (90.29%), Postives = 94/103 (91.26%), Query Frame = 0


Query: 1   MTPISDPFPVNLTVKNGGN-----RAAVSGLSSPAAQVKGQTKLSQQQQTIRKQRICWSP 60
           MTPISDPFPVNLTVKNGGN     RAAVSGLSSPA Q+KGQ KLSQQQQTIRKQR CWSP
Sbjct: 191 MTPISDPFPVNLTVKNGGNGGRNGRAAVSGLSSPAGQMKGQPKLSQQQQTIRKQRRCWSP 250

Query: 61  ELHRRFVDALHRLGGSQVATPKQIMELMQVDGLTNDEVKSHLQ 99
           ELHRRFVDALHRLGGSQVATPKQI ELMQVDGLTNDEVKSHLQ
Sbjct: 251 ELHRRFVDALHRLGGSQVATPKQIRELMQVDGLTNDEVKSHLQ 293

[Close]

BLAST of Lcy05g019420 vs. NCBI nr
Match: XP_038881045.1 (transcription factor HHO5 [Benincasa hispida])

HSP 1 Score: 176.0 bits (445), Expect = 1.7e-40
Identity = 91/103 (88.35%), Postives = 94/103 (91.26%), Query Frame = 0


Query: 1   MTPISDPFPVNLTVKNGG-----NRAAVSGLSSPAAQVKGQTKLSQQQQTIRKQRICWSP 60
           MTPISDPFPV+LTVK+GG      RAAVSGLSSPAAQ+KGQ KLSQQQQTIRKQR CWSP
Sbjct: 194 MTPISDPFPVSLTVKSGGGGGRSGRAAVSGLSSPAAQMKGQAKLSQQQQTIRKQRRCWSP 253

Query: 61  ELHRRFVDALHRLGGSQVATPKQIMELMQVDGLTNDEVKSHLQ 99
           ELHRRFVDALHRLGGSQVATPKQI ELMQVDGLTNDEVKSHLQ
Sbjct: 254 ELHRRFVDALHRLGGSQVATPKQIRELMQVDGLTNDEVKSHLQ 296

[Close]

BLAST of Lcy05g019420 vs. NCBI nr
Match: XP_022963275.1 (transcription factor HHO5-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 173.3 bits (438), Expect = 1.1e-39
Identity = 90/107 (84.11%), Postives = 95/107 (88.79%), Query Frame = 0


Query: 1   MTPISDPFPVNLTVKNG---GNRAAVSGLSSPAAQVKGQTKLSQQQQTIRKQRICWSPEL 60
           MTPISDPF  NLT+KNG   G+ A+VSGLSSPAAQ+ G  KLSQ QQTIRKQR CWSPEL
Sbjct: 192 MTPISDPFSGNLTLKNGTARGSSASVSGLSSPAAQITGHPKLSQHQQTIRKQRRCWSPEL 251

Query: 61  HRRFVDALHRLGGSQVATPKQIMELMQVDGLTNDEVKSHLQVRLTKK 105
           HRRFVDALHRLGGSQVATPKQI ELMQVDGLTNDEVKSHLQVRLT+K
Sbjct: 252 HRRFVDALHRLGGSQVATPKQIRELMQVDGLTNDEVKSHLQVRLTQK 298

[Close]

BLAST of Lcy05g019420 vs. TAIR 10
Match: AT1G25550.1 (myb-like transcription factor family protein )

HSP 1 Score: 95.1 bits (235), Expect = 3.5e-20
Identity = 50/74 (67.57%), Postives = 58/74 (78.38%), Query Frame = 0


Query: 27  SSPAAQVKGQTKLSQQQQ--TIRKQRICWSPELHRRFVDALHRLGGSQVATPKQIMELMQ 86
           SS A  V G  +  +Q+Q  + RKQR CWSPELHRRF+ AL +LGGS VATPKQI +LM+
Sbjct: 186 SSTAETVGGGKEFEEQKQSHSNRKQRRCWSPELHRRFLHALQQLGGSHVATPKQIRDLMK 245

Query: 87  VDGLTNDEVKSHLQ 99
           VDGLTNDEVKSHLQ
Sbjct: 246 VDGLTNDEVKSHLQ 259

[Close]

BLAST of Lcy05g019420 vs. TAIR 10
Match: AT2G03500.1 (Homeodomain-like superfamily protein )

HSP 1 Score: 93.6 bits (231), Expect = 1.0e-19
Identity = 46/59 (77.97%), Postives = 49/59 (83.05%), Query Frame = 0


Query: 40  SQQQQTIRKQRICWSPELHRRFVDALHRLGGSQVATPKQIMELMQVDGLTNDEVKSHLQ 99
           S   Q+ RK R CWSP+LHRRFV AL  LGGSQVATPKQI ELM+VDGLTNDEVKSHLQ
Sbjct: 225 STTSQSNRKARRCWSPDLHRRFVQALQMLGGSQVATPKQIRELMKVDGLTNDEVKSHLQ 283

[Close]

BLAST of Lcy05g019420 vs. TAIR 10
Match: AT1G68670.1 (myb-like transcription factor family protein )

HSP 1 Score: 92.0 bits (227), Expect = 2.9e-19
Identity = 46/66 (69.70%), Postives = 54/66 (81.82%), Query Frame = 0


Query: 36  QTKLSQQQ---QTIRKQRICWSPELHRRFVDALHRLGGSQVATPKQIMELMQVDGLTNDE 95
           + ++ QQQ    T RKQR CWSPELHRRF++AL +LGGS VATPKQI + M+VDGLTNDE
Sbjct: 200 ERRIEQQQSQSHTHRKQRRCWSPELHRRFLNALQQLGGSHVATPKQIRDHMKVDGLTNDE 259

Query: 96  VKSHLQ 99
           VKSHLQ
Sbjct: 260 VKSHLQ 265

[Close]

BLAST of Lcy05g019420 vs. TAIR 10
Match: AT1G49560.1 (Homeodomain-like superfamily protein )

HSP 1 Score: 91.7 bits (226), Expect = 3.8e-19
Identity = 46/75 (61.33%), Postives = 53/75 (70.67%), Query Frame = 0


Query: 24  SGLSSPAAQVKGQTKLSQQQQTIRKQRICWSPELHRRFVDALHRLGGSQVATPKQIMELM 83
           + +  P      Q     +QQ +RKQR CW+PELHRRFVDAL +LGG  VATPKQI E M
Sbjct: 168 NSMPQPPTPAVPQQPAFLKQQALRKQRRCWNPELHRRFVDALQQLGGPGVATPKQIREHM 227

Query: 84  QVDGLTNDEVKSHLQ 99
           Q +GLTNDEVKSHLQ
Sbjct: 228 QEEGLTNDEVKSHLQ 242

[Close]

BLAST of Lcy05g019420 vs. TAIR 10
Match: AT4G37180.2 (Homeodomain-like superfamily protein )

HSP 1 Score: 89.4 bits (220), Expect = 1.9e-18
Identity = 47/63 (74.60%), Postives = 51/63 (80.95%), Query Frame = 0


Query: 38  KLSQQQQTIRK--QRICWSPELHRRFVDALHRLGGSQVATPKQIMELMQVDGLTNDEVKS 97
           K S Q   I+K  QR  WS ELHR+FVDALHRLGG QVATPKQI +LM+VDGLTNDEVKS
Sbjct: 205 KPSSQSHHIQKKEQRRRWSQELHRKFVDALHRLGGPQVATPKQIRDLMKVDGLTNDEVKS 264

Query: 98  HLQ 99
           HLQ
Sbjct: 265 HLQ 267

The following BLAST results are available for this feature:

BLAST of Lcy05g019420 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FPE8	4.9e-19	67.57	Transcription factor HHO3 OS=Arabidopsis thaliana OX=3702 GN=HHO3 PE=1 SV=1	[more]
Q5VRW2	1.1e-18	63.75	Transcription factor NIGTH1 OS=Oryza sativa subsp. japonica OX=39947 GN=NHO1 PE=...	[more]
Q9ZQ85	1.4e-18	77.97	Myb family transcription factor EFM OS=Arabidopsis thaliana OX=3702 GN=EFM PE=1 ...	[more]
Q8VZS3	4.1e-18	69.70	Transcription factor HHO2 OS=Arabidopsis thaliana OX=3702 GN=HHO2 PE=1 SV=1	[more]
Q6Z869	4.1e-18	77.19	Transcription factor NIGT1 OS=Oryza sativa subsp. japonica OX=39947 GN=NIGT1 PE=...	[more]

BLAST of Lcy05g019420 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1BXV9	1.1e-42	88.68	transcription factor HHO5 OS=Momordica charantia OX=3673 GN=LOC111005725 PE=4 SV...	[more]
A0A1S3B0P5	3.3e-42	90.29	uncharacterized protein LOC103484758 OS=Cucumis melo OX=3656 GN=LOC103484758 PE=...	[more]
A0A0A0KIA9	4.3e-42	90.29	HTH myb-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G49019...	[more]
A0A6J1HHJ1	5.2e-40	84.11	transcription factor HHO5-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC11...	[more]
A0A6J1KS63	6.4e-38	84.16	transcription factor HHO5-like OS=Cucurbita maxima OX=3661 GN=LOC111497148 PE=4 ...	[more]

BLAST of Lcy05g019420 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022133033.1	2.3e-42	88.68	transcription factor HHO5 [Momordica charantia]	[more]
XP_008440244.1	6.7e-42	90.29	PREDICTED: uncharacterized protein LOC103484758 [Cucumis melo]	[more]
XP_004141926.1	8.8e-42	90.29	transcription factor HHO5 [Cucumis sativus] >KGN48504.1 hypothetical protein Csa...	[more]
XP_038881045.1	1.7e-40	88.35	transcription factor HHO5 [Benincasa hispida]	[more]
XP_022963275.1	1.1e-39	84.11	transcription factor HHO5-like isoform X2 [Cucurbita moschata]	[more]

BLAST of Lcy05g019420 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G25550.1	3.5e-20	67.57	myb-like transcription factor family protein	[more]
AT2G03500.1	1.0e-19	77.97	Homeodomain-like superfamily protein	[more]
AT1G68670.1	2.9e-19	69.70	myb-like transcription factor family protein	[more]
AT1G49560.1	3.8e-19	61.33	Homeodomain-like superfamily protein	[more]
AT4G37180.2	1.9e-18	74.60	Homeodomain-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR017930	Myb domain	PFAM	PF00249	Myb_DNA-binding	coord: 52..99 e-value: 3.8E-7 score: 30.2
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 45..104 score: 12.931774
IPR006447	Myb domain, plants	TIGRFAM	TIGR01557	TIGR01557	coord: 48..100 e-value: 3.8E-24 score: 82.8
None	No IPR available	GENE3D	1.10.10.60		coord: 47..104 e-value: 1.0E-25 score: 91.6
None	No IPR available	PANTHER	PTHR31003:SF3	TRANSCRIPTION FACTOR HHO6	coord: 31..98
IPR044787	Myb family transcription factor HRS1-like	PANTHER	PTHR31003	MYB FAMILY TRANSCRIPTION FACTOR	coord: 31..98
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 45..100

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy05g019420.1	Lcy05g019420.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity