Lcy05g019390 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy05g019390
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	Zinc finger BED domain-containing protein RICESLEEPER 2-like
Location	Chr05: 40951656 .. 40952351 (+)
RNA-Seq Expression	Lcy05g019390
Synteny	Lcy05g019390

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTTGATCATGCAATCCAATTTGAGAAAGCTTTTAAAATTTTGGAGGAAGAGAAAACAGAGTCAGATTTTGTTGATTATTTTGAGGAAGATGACCATGGAAATAAAAGATTGGGGCCACCAACTGCATTTGATTGGGAAAATGTGAAGGTGTTTGTTAAGTTCTTGAAGAAGTTTTATGATGCCACTAATAAAATAAGTGGTTCTTTGTATGTGACTTCTAATGTTGGTTTTCATCAACTTTATGGTATTCAATTTAGTTTAATGAAGTGGAGCAGAAATCCTAACTCTATTCTATGCAATATGGCTTCCAATATGAAGAAAAAGTTTGACAAGTATTGGGGTTCAGTTGAAAAGATTAATAAGTTGTTATTTATTGTTGTGGTACTTGATCCTCGTTACAAGTTGGATTATGTGTCGTATTCCTTTTCTACTGTTTATGATGCTAGTGTGGTTAAAGAGATGGTTGAGAATGTCAAGATATATTTATATCGTCTGTATGAATTTTACAAATCTCATGACAAAACCAAACGAGGTAGTAGTAGTACTACTACTGATAGTGGTGGTGGTTCTCAACAATCAAGCGTTGTCACTAGTATAGACACTGCAGGTGATGAAGATACTGATATACAGACGGGTTATAAGAGAAGAAGGGAAGAGGAAAGTTCATTGGAAGTGGAGAATGTATTTTTCTGA

mRNA sequence

ATGTTTGATCATGCAATCCAATTTGAGAAAGCTTTTAAAATTTTGGAGGAAGAGAAAACAGAGTCAGATTTTGTTGATTATTTTGAGGAAGATGACCATGGAAATAAAAGATTGGGGCCACCAACTGCATTTGATTGGGAAAATGTGAAGGTGTTTGTTAAGTTCTTGAAGAAGTTTTATGATGCCACTAATAAAATAAGTGGTTCTTTGTATGTGACTTCTAATGTTGGTTTTCATCAACTTTATGGTATTCAATTTAGTTTAATGAAGTGGAGCAGAAATCCTAACTCTATTCTATGCAATATGGCTTCCAATATGAAGAAAAAGTTTGACAAGTATTGGGGTTCAGTTGAAAAGATTAATAAGTTGTTATTTATTGTTGTGGTACTTGATCCTCGTTACAAGTTGGATTATGTGTCGTATTCCTTTTCTACTGTTTATGATGCTAGTGTGGTTAAAGAGATGGTTGAGAATGTCAAGATATATTTATATCGTCTGTATGAATTTTACAAATCTCATGACAAAACCAAACGAGGTAGTAGTAGTACTACTACTGATAGTGGTGGTGGTTCTCAACAATCAAGCGTTGTCACTAGTATAGACACTGCAGGTGATGAAGATACTGATATACAGACGGGTTATAAGAGAAGAAGGGAAGAGGAAAGTTCATTGGAAGTGGAGAATGTATTTTTCTGA

Coding sequence (CDS)

ATGTTTGATCATGCAATCCAATTTGAGAAAGCTTTTAAAATTTTGGAGGAAGAGAAAACAGAGTCAGATTTTGTTGATTATTTTGAGGAAGATGACCATGGAAATAAAAGATTGGGGCCACCAACTGCATTTGATTGGGAAAATGTGAAGGTGTTTGTTAAGTTCTTGAAGAAGTTTTATGATGCCACTAATAAAATAAGTGGTTCTTTGTATGTGACTTCTAATGTTGGTTTTCATCAACTTTATGGTATTCAATTTAGTTTAATGAAGTGGAGCAGAAATCCTAACTCTATTCTATGCAATATGGCTTCCAATATGAAGAAAAAGTTTGACAAGTATTGGGGTTCAGTTGAAAAGATTAATAAGTTGTTATTTATTGTTGTGGTACTTGATCCTCGTTACAAGTTGGATTATGTGTCGTATTCCTTTTCTACTGTTTATGATGCTAGTGTGGTTAAAGAGATGGTTGAGAATGTCAAGATATATTTATATCGTCTGTATGAATTTTACAAATCTCATGACAAAACCAAACGAGGTAGTAGTAGTACTACTACTGATAGTGGTGGTGGTTCTCAACAATCAAGCGTTGTCACTAGTATAGACACTGCAGGTGATGAAGATACTGATATACAGACGGGTTATAAGAGAAGAAGGGAAGAGGAAAGTTCATTGGAAGTGGAGAATGTATTTTTCTGA

Protein sequence

MFDHAIQFEKAFKILEEEKTESDFVDYFEEDDHGNKRLGPPTAFDWENVKVFVKFLKKFYDATNKISGSLYVTSNVGFHQLYGIQFSLMKWSRNPNSILCNMASNMKKKFDKYWGSVEKINKLLFIVVVLDPRYKLDYVSYSFSTVYDASVVKEMVENVKIYLYRLYEFYKSHDKTKRGSSSTTTDSGGGSQQSSVVTSIDTAGDEDTDIQTGYKRRREEESSLEVENVFF

Homology

[Close]

BLAST of Lcy05g019390 vs. ExPASy Swiss-Prot
Match: B9FJG3 (Zinc finger BED domain-containing protein RICESLEEPER 1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0239150 PE=3 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 2.8e-14
Identity = 56/205 (27.32%), Postives = 101/205 (49.27%), Query Frame = 0


Query: 5   AIQFEKAFKILEEEKTESDFVDYFEEDDHGNKRLGPPTAFDWENVKVFVKFLKKFYDATN 64
           A+ +++AF  LE              DD+ N+    P+A DW+ V+    +LK  YD+ +
Sbjct: 414 ALDYKQAFSTLE------------TSDDNYNE---APSAEDWKKVEAACNYLKLLYDSAH 473

Query: 65  KISGSLYVTSNVGFHQLYGIQFSLMKWSRNPNSILCNMASNMKKKFDKYWGSVEKINKLL 124
            I  +   TSN+ FH+ + +Q  L   +   + +  ++A +M ++FDKYW   +  N +L
Sbjct: 474 SIMAAANPTSNLFFHEAWKLQLELSNATGREDPVFSSIAKDMHERFDKYW---KDCNLVL 533

Query: 125 FIVVVLDPRYKLDYVSYSFSTVYDASVVKEMVENVKIYLYRLYEFYKSHDKTKRGSSSTT 184
            I VV+DPR+K+  V +S+S +Y      E  + VK+    ++E Y  +       +   
Sbjct: 534 AIAVVMDPRFKMKLVEFSYSKIYGV----EAAKYVKVVDDAVHELYNEYVAQPLPLTPAY 593

Query: 185 TDSGGG----SQQSSVVTSIDTAGD 206
            + GGG    + ++S   +  + GD
Sbjct: 594 VEQGGGNNAPASENSTQATAPSTGD 596

[Close]

BLAST of Lcy05g019390 vs. ExPASy Swiss-Prot
Match: Q6AVI0 (Zinc finger BED domain-containing protein RICESLEEPER 2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0733400 PE=2 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 2.3e-13
Identity = 64/230 (27.83%), Postives = 113/230 (49.13%), Query Frame = 0


Query: 5   AIQFEKAFKILEEEKTESDFVDYFEEDDHGNKRLGPPTAFDWENVKVFVKFLKKFYDATN 64
           A+ +++AF  LE              DD+ N+    P+A DW+ V+    +LK  YD+ +
Sbjct: 414 ALDYKQAFSTLE------------TSDDNYNE---APSAEDWKKVEAACNYLKLLYDSAH 473

Query: 65  KISGSLYVTSNVGFHQLYGIQFSLMKWSRNPNSILCNMASNMKKKFDKYWGSVEKINKLL 124
            I  +   TSN+ FH+ + +Q  L   + + + +  ++A +M ++FDKYW   +  N +L
Sbjct: 474 SIMAAANPTSNLFFHEAWKLQLELSNATGHEDPVFSSIAKDMHERFDKYW---KDCNLVL 533

Query: 125 FIVVVLDPRYKLDYVSYSFSTVYDASVVKEMVENVKIYLYRLYEFYKSHD------KTKR 184
            I VV+DPR+K+  V +S+S +Y     K  V+ V   ++ LY+ Y +          ++
Sbjct: 534 AIAVVMDPRFKMKLVEFSYSKIYGVEAAK-YVKVVDDAVHELYKEYVAQPLPLTPAYVEQ 593

Query: 185 GSSSTTTDSGGGSQQSSVVTSIDTAGDED---TDIQTGYKRRREEESSLE 226
           G  +    S  G+Q ++  T  D   D D   ++I T    + E E  L+
Sbjct: 594 GDGNNAPASENGTQATAPSTG-DGLVDFDMYLSEIATSQPTKSELEQYLD 623

[Close]

BLAST of Lcy05g019390 vs. ExPASy Swiss-Prot
Match: Q75HY5 (Zinc finger BED domain-containing protein RICESLEEPER 3 OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0583200 PE=2 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 1.5e-12
Identity = 43/143 (30.07%), Postives = 74/143 (51.75%), Query Frame = 0


Query: 41  PTAFDWENVKVFVKFLKKFYDATNKISGSLYVTSNVGFHQLYGIQFSLMKWSRNPNSILC 100
           P+  DW+ V+    +L   YD+ + I  +   TSN+ FH+ + +Q  L     + + I  
Sbjct: 476 PSTEDWKKVEAACSYLSLLYDSAHNIMAAPNPTSNIFFHEAWKLQSELSNAIAHEDPIFR 535

Query: 101 NMASNMKKKFDKYWGSVEKINKLLFIVVVLDPRYKLDYVSYSFSTVYDASVVKEMVENVK 160
           + A  M ++FDKYW   +  N +L I VV+DPR+K+  V +S+S ++     K  V+ V 
Sbjct: 536 STAKIMHERFDKYW---KDCNLVLAIAVVMDPRFKMKLVEFSYSKIHSVEAAK-YVKVVD 595

Query: 161 IYLYRLYEFYKSHDKTKRGSSST 184
             ++ LY  Y +  +  R +  T
Sbjct: 596 DAIHELYSEYATQGEANRDAHVT 614

[Close]

BLAST of Lcy05g019390 vs. ExPASy Swiss-Prot
Match: P08770 (Putative AC transposase OS=Zea mays OX=4577 PE=2 SV=2)

HSP 1 Score: 70.9 bits (172), Expect = 2.2e-11
Identity = 44/147 (29.93%), Postives = 75/147 (51.02%), Query Frame = 0


Query: 41  PTAFDWENVKVFVKFLKKFYDATNKISGSLYVTSNVGFHQLYGIQFSLMKWSRNPNSILC 100
           P A +W+      K LKKF+D T  +SG+ Y T+N+ +     I+  + +W  +   ++ 
Sbjct: 497 PKAEEWKMALTLFKCLKKFFDLTELLSGTQYSTANLFYKGFCEIKDLIDQWCVHEKFVIR 556

Query: 101 NMASNMKKKFDKYWGSVEKINKLLFIVVVLDPRYKLDYVSYSFSTVYDASVVKEMVENVK 160
            MA  M +KF+KYW   +  N  L +   LDPRYK   + +     +  S    + + V+
Sbjct: 557 RMAVAMSEKFEKYW---KVSNIALAVACFLDPRYKKILIEFYMKKFHGDSYKVHVDDFVR 616

Query: 161 IYLYRLYEFYKSHDKTKRGSSSTTTDS 188
           + + +LY+FY S   +   + +TT DS
Sbjct: 617 V-IRKLYQFYSSCSPSAPKTKTTTNDS 639

[Close]

BLAST of Lcy05g019390 vs. ExPASy Swiss-Prot
Match: Q0JMB2 (Zinc finger BED domain-containing protein RICESLEEPER 4 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0518400 PE=2 SV=3)

HSP 1 Score: 67.4 bits (163), Expect = 2.4e-10
Identity = 46/168 (27.38%), Postives = 85/168 (50.60%), Query Frame = 0


Query: 5   AIQFEKAFKILEEEKTESDFVDYFEEDDHGNKRLGPPTAFDWENVKVFVKFLKKFYDATN 64
           A+ + + F +LE          Y+  D++G      P+  DW+ V+    FLK  Y  T 
Sbjct: 381 ALDYRQVFTLLE---------SYY--DNYGT----APSTEDWKKVEAACGFLKLLYAFTL 440

Query: 65  KISGS--LYVTSNVGFHQLYGIQFSLMKWSRNPNSILCNMASNMKKKFDKYWGSVEKINK 124
            I  +   + T+N+ FH  + +Q  L     + + ++  +   + +KFDKYW   +  N 
Sbjct: 441 NIMSAEGNHQTANMFFHDAWVLQLELQNGMAHGDDVIRGIVIGIHEKFDKYW---KDCNV 500

Query: 125 LLFIVVVLDPRYKLDYVSYSFSTVY---DASVVKEMVENVKIYLYRLY 168
           +L I V +DPR+K+  V +++S +Y   DA+   ++V++  + LY+ Y
Sbjct: 501 VLAIAVAMDPRFKMKMVEFAYSKIYGPTDAAKYVKLVDDAILDLYKEY 530

[Close]

BLAST of Lcy05g019390 vs. ExPASy TrEMBL
Match: A0A5D3DSA5 (Zinc finger BED domain-containing protein RICESLEEPER 2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold313G00240 PE=4 SV=1)

HSP 1 Score: 262.3 bits (669), Expect = 1.9e-66
Identity = 137/228 (60.09%), Postives = 172/228 (75.44%), Query Frame = 0


Query: 1   MFDHAIQFEKAFKILEEEKTESDFVDYFEEDDHGNKRLGPPTAFDWENVKVFVKFLKKFY 60
           M +HAI+FEKAFKILEEEK +SDFV+YFEEDD GNKRLGPP+  DW  V VF+KFLK FY
Sbjct: 379 MLEHAIKFEKAFKILEEEKEDSDFVEYFEEDDRGNKRLGPPSESDWLAVSVFIKFLKGFY 438

Query: 61  DATNKISGSLYVTSNVGFHQLYGIQFSLMKWSRNPNSILCNMASNMKKKFDKYWGSVEKI 120
           + T K+SGS YVTSNVG+ ++  IQF L KWS N NS+L  MA NMK KFDKYWGS+EK+
Sbjct: 439 ETTTKVSGSSYVTSNVGYKEINKIQFVLKKWSNNNNSVLSLMAMNMKAKFDKYWGSLEKM 498

Query: 121 NKLLFIVVVLDPRYKLDYVSYSFSTVYDASVVKEMVENVKIYLYRLYEFYKSHDKTKRGS 180
           NKL+F+ +V+DPRYKL Y++Y  S VY++ VVK++VE+VKIYLYRLY+FYKS    +  S
Sbjct: 499 NKLMFVAMVIDPRYKLKYLTYCLSNVYESDVVKDVVESVKIYLYRLYDFYKS----QHNS 558

Query: 181 SSTTTDSGGGSQQSSVVTSIDTAGDEDTDIQTGYKRRREEESSLEVEN 229
           S+    S    +QS+ VT ++   DE+ D    +   REEESS+EVEN
Sbjct: 559 STQIGHSTDDLKQSNNVT-MEVENDEEVDPWITFCALREEESSMEVEN 601

[Close]

BLAST of Lcy05g019390 vs. ExPASy TrEMBL
Match: A0A5A7UR09 (Zinc finger BED domain-containing protein RICESLEEPER 2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold319G001560 PE=4 SV=1)

HSP 1 Score: 260.0 bits (663), Expect = 9.4e-66
Identity = 136/228 (59.65%), Postives = 171/228 (75.00%), Query Frame = 0


Query: 1   MFDHAIQFEKAFKILEEEKTESDFVDYFEEDDHGNKRLGPPTAFDWENVKVFVKFLKKFY 60
           M +HAI+FEKAFKILEEEK +SDFV+YFEEDD GNKRLGPP+  DW  V VF+KFLK FY
Sbjct: 395 MLEHAIKFEKAFKILEEEKEDSDFVEYFEEDDRGNKRLGPPSESDWLAVSVFIKFLKGFY 454

Query: 61  DATNKISGSLYVTSNVGFHQLYGIQFSLMKWSRNPNSILCNMASNMKKKFDKYWGSVEKI 120
           + T K+SGS YVTSNVG+ ++  IQF L KWS N N +L  MA NMK KFDKYWGS+EK+
Sbjct: 455 ETTTKVSGSSYVTSNVGYKEINKIQFVLKKWSNNNNYVLSLMAMNMKAKFDKYWGSLEKM 514

Query: 121 NKLLFIVVVLDPRYKLDYVSYSFSTVYDASVVKEMVENVKIYLYRLYEFYKSHDKTKRGS 180
           NKL+F+ +V+DPRYKL Y++Y  S VY++ VVK++VE+VKIYLYRLY+FYKS    +  S
Sbjct: 515 NKLMFVAMVIDPRYKLKYLTYCLSNVYESDVVKDVVESVKIYLYRLYDFYKS----QHNS 574

Query: 181 SSTTTDSGGGSQQSSVVTSIDTAGDEDTDIQTGYKRRREEESSLEVEN 229
           S+    S    +QS+ VT ++   DE+ D    +   REEESS+EVEN
Sbjct: 575 STQIGHSTDDLKQSNNVT-MEVENDEEVDPWITFCALREEESSMEVEN 617

[Close]

BLAST of Lcy05g019390 vs. ExPASy TrEMBL
Match: A0A5D3CE24 (Zinc finger BED domain-containing protein RICESLEEPER 2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold994G00200 PE=4 SV=1)

HSP 1 Score: 258.5 bits (659), Expect = 2.7e-65
Identity = 134/228 (58.77%), Postives = 169/228 (74.12%), Query Frame = 0


Query: 1   MFDHAIQFEKAFKILEEEKTESDFVDYFEEDDHGNKRLGPPTAFDWENVKVFVKFLKKFY 60
           M +HAI+FEKAFK LEEEK +SDFV+YFEEDD GNKRLGPP+  DW  V VF+KFLK FY
Sbjct: 1   MLEHAIKFEKAFKSLEEEKEDSDFVEYFEEDDRGNKRLGPPSESDWLAVSVFIKFLKGFY 60

Query: 61  DATNKISGSLYVTSNVGFHQLYGIQFSLMKWSRNPNSILCNMASNMKKKFDKYWGSVEKI 120
           + T K+SGS YVTSNVG+ ++  IQF L KWS N NS+L  MA NMK KFDKYWGS+EK+
Sbjct: 61  ETTTKVSGSSYVTSNVGYKEINKIQFVLKKWSNNNNSVLSLMAMNMKAKFDKYWGSLEKM 120

Query: 121 NKLLFIVVVLDPRYKLDYVSYSFSTVYDASVVKEMVENVKIYLYRLYEFYKSHDKTKRGS 180
           NKL+F+ +V+DPRYKL Y++Y  S VY++ VVK++VE+VKIYLYRLY+FY+S        
Sbjct: 121 NKLMFVAMVIDPRYKLKYLTYCLSNVYESDVVKDVVESVKIYLYRLYDFYRSQHTPSTQI 180

Query: 181 SSTTTDSGGGSQQSSVVTSIDTAGDEDTDIQTGYKRRREEESSLEVEN 229
             +T D     +QS+ VT ++   DE+ D    +   REEESS+EVEN
Sbjct: 181 GHSTDD----LKQSNNVT-MEVENDEEVDPWITFCALREEESSMEVEN 223

[Close]

BLAST of Lcy05g019390 vs. ExPASy TrEMBL
Match: A0A5D3CWJ0 (Zinc finger BED domain-containing protein RICESLEEPER 2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold637G00740 PE=4 SV=1)

HSP 1 Score: 248.4 bits (633), Expect = 2.8e-62
Identity = 130/228 (57.02%), Postives = 167/228 (73.25%), Query Frame = 0


Query: 1   MFDHAIQFEKAFKILEEEKTESDFVDYFEEDDHGNKRLGPPTAFDWENVKVFVKFLKKFY 60
           M +H I+FEKAFKILEEEK +SDFV+YFEEDD  NKRLGPP+  DW  V VF+KFLK FY
Sbjct: 379 MLEHTIKFEKAFKILEEEKDDSDFVEYFEEDDRENKRLGPPSESDWLAVNVFIKFLKGFY 438

Query: 61  DATNKISGSLYVTSNVGFHQLYGIQFSLMKWSRNPNSILCNMASNMKKKFDKYWGSVEKI 120
           + T K+SGS YVTSNVG+ ++  IQF L KWS N NS+L  MA NMK KFDKYWG +EK+
Sbjct: 439 ETTTKVSGSSYVTSNVGYKEINKIQFVLKKWSNNNNSVLSLMAMNMKAKFDKYWGLLEKM 498

Query: 121 NKLLFIVVVLDPRYKLDYVSYSFSTVYDASVVKEMVENVKIYLYRLYEFYKSHDKTKRGS 180
           NKL+F+ +V+DPRYKL Y++Y  S VY++ VVK++VE+ KIYLYRLY+FYKS    +   
Sbjct: 499 NKLMFVTMVIDPRYKLKYLTYCLSNVYESDVVKDVVESTKIYLYRLYDFYKS----QHNP 558

Query: 181 SSTTTDSGGGSQQSSVVTSIDTAGDEDTDIQTGYKRRREEESSLEVEN 229
           S+    S    +QS+ VT ++   +E+ D    +   REEES++EVEN
Sbjct: 559 STQIGHSMDDLKQSNNVT-MEVENNEEVDPWITFCALREEESAMEVEN 601

[Close]

BLAST of Lcy05g019390 vs. ExPASy TrEMBL
Match: A0A5A7UBZ7 (Zinc finger BED domain-containing protein RICESLEEPER 2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold428G00820 PE=4 SV=1)

HSP 1 Score: 248.4 bits (633), Expect = 2.8e-62
Identity = 130/228 (57.02%), Postives = 167/228 (73.25%), Query Frame = 0


Query: 1   MFDHAIQFEKAFKILEEEKTESDFVDYFEEDDHGNKRLGPPTAFDWENVKVFVKFLKKFY 60
           M +H I+FEKAFKILEEEK +SDFV+YFEEDD  NKRLGPP+  DW  V VF+KFLK FY
Sbjct: 377 MLEHTIKFEKAFKILEEEKDDSDFVEYFEEDDRENKRLGPPSESDWLAVNVFIKFLKGFY 436

Query: 61  DATNKISGSLYVTSNVGFHQLYGIQFSLMKWSRNPNSILCNMASNMKKKFDKYWGSVEKI 120
           + T K+SGS YVTSNVG+ ++  IQF L KWS N NS+L  MA NMK KFDKYWG +EK+
Sbjct: 437 ETTTKVSGSSYVTSNVGYKEINKIQFVLKKWSNNNNSVLSLMAMNMKAKFDKYWGLLEKM 496

Query: 121 NKLLFIVVVLDPRYKLDYVSYSFSTVYDASVVKEMVENVKIYLYRLYEFYKSHDKTKRGS 180
           NKL+F+ +V+DPRYKL Y++Y  S VY++ VVK++VE+ KIYLYRLY+FYKS    +   
Sbjct: 497 NKLMFVTMVIDPRYKLKYLTYCLSNVYESDVVKDVVESTKIYLYRLYDFYKS----QHNP 556

Query: 181 SSTTTDSGGGSQQSSVVTSIDTAGDEDTDIQTGYKRRREEESSLEVEN 229
           S+    S    +QS+ VT ++   +E+ D    +   REEES++EVEN
Sbjct: 557 STQIGHSMDDLKQSNNVT-MEVENNEEVDPWITFCALREEESAMEVEN 599

[Close]

BLAST of Lcy05g019390 vs. NCBI nr
Match: TYK26463.1 (zinc finger BED domain-containing protein RICESLEEPER 2-like [Cucumis melo var. makuwa])

HSP 1 Score: 262.3 bits (669), Expect = 3.9e-66
Identity = 137/228 (60.09%), Postives = 172/228 (75.44%), Query Frame = 0


Query: 1   MFDHAIQFEKAFKILEEEKTESDFVDYFEEDDHGNKRLGPPTAFDWENVKVFVKFLKKFY 60
           M +HAI+FEKAFKILEEEK +SDFV+YFEEDD GNKRLGPP+  DW  V VF+KFLK FY
Sbjct: 379 MLEHAIKFEKAFKILEEEKEDSDFVEYFEEDDRGNKRLGPPSESDWLAVSVFIKFLKGFY 438

Query: 61  DATNKISGSLYVTSNVGFHQLYGIQFSLMKWSRNPNSILCNMASNMKKKFDKYWGSVEKI 120
           + T K+SGS YVTSNVG+ ++  IQF L KWS N NS+L  MA NMK KFDKYWGS+EK+
Sbjct: 439 ETTTKVSGSSYVTSNVGYKEINKIQFVLKKWSNNNNSVLSLMAMNMKAKFDKYWGSLEKM 498

Query: 121 NKLLFIVVVLDPRYKLDYVSYSFSTVYDASVVKEMVENVKIYLYRLYEFYKSHDKTKRGS 180
           NKL+F+ +V+DPRYKL Y++Y  S VY++ VVK++VE+VKIYLYRLY+FYKS    +  S
Sbjct: 499 NKLMFVAMVIDPRYKLKYLTYCLSNVYESDVVKDVVESVKIYLYRLYDFYKS----QHNS 558

Query: 181 SSTTTDSGGGSQQSSVVTSIDTAGDEDTDIQTGYKRRREEESSLEVEN 229
           S+    S    +QS+ VT ++   DE+ D    +   REEESS+EVEN
Sbjct: 559 STQIGHSTDDLKQSNNVT-MEVENDEEVDPWITFCALREEESSMEVEN 601

[Close]

BLAST of Lcy05g019390 vs. NCBI nr
Match: KAA0056011.1 (zinc finger BED domain-containing protein RICESLEEPER 2-like [Cucumis melo var. makuwa])

HSP 1 Score: 260.0 bits (663), Expect = 1.9e-65
Identity = 136/228 (59.65%), Postives = 171/228 (75.00%), Query Frame = 0


Query: 1   MFDHAIQFEKAFKILEEEKTESDFVDYFEEDDHGNKRLGPPTAFDWENVKVFVKFLKKFY 60
           M +HAI+FEKAFKILEEEK +SDFV+YFEEDD GNKRLGPP+  DW  V VF+KFLK FY
Sbjct: 395 MLEHAIKFEKAFKILEEEKEDSDFVEYFEEDDRGNKRLGPPSESDWLAVSVFIKFLKGFY 454

Query: 61  DATNKISGSLYVTSNVGFHQLYGIQFSLMKWSRNPNSILCNMASNMKKKFDKYWGSVEKI 120
           + T K+SGS YVTSNVG+ ++  IQF L KWS N N +L  MA NMK KFDKYWGS+EK+
Sbjct: 455 ETTTKVSGSSYVTSNVGYKEINKIQFVLKKWSNNNNYVLSLMAMNMKAKFDKYWGSLEKM 514

Query: 121 NKLLFIVVVLDPRYKLDYVSYSFSTVYDASVVKEMVENVKIYLYRLYEFYKSHDKTKRGS 180
           NKL+F+ +V+DPRYKL Y++Y  S VY++ VVK++VE+VKIYLYRLY+FYKS    +  S
Sbjct: 515 NKLMFVAMVIDPRYKLKYLTYCLSNVYESDVVKDVVESVKIYLYRLYDFYKS----QHNS 574

Query: 181 SSTTTDSGGGSQQSSVVTSIDTAGDEDTDIQTGYKRRREEESSLEVEN 229
           S+    S    +QS+ VT ++   DE+ D    +   REEESS+EVEN
Sbjct: 575 STQIGHSTDDLKQSNNVT-MEVENDEEVDPWITFCALREEESSMEVEN 617

[Close]

BLAST of Lcy05g019390 vs. NCBI nr
Match: TYK09522.1 (zinc finger BED domain-containing protein RICESLEEPER 2-like [Cucumis melo var. makuwa])

HSP 1 Score: 258.5 bits (659), Expect = 5.7e-65
Identity = 134/228 (58.77%), Postives = 169/228 (74.12%), Query Frame = 0


Query: 1   MFDHAIQFEKAFKILEEEKTESDFVDYFEEDDHGNKRLGPPTAFDWENVKVFVKFLKKFY 60
           M +HAI+FEKAFK LEEEK +SDFV+YFEEDD GNKRLGPP+  DW  V VF+KFLK FY
Sbjct: 1   MLEHAIKFEKAFKSLEEEKEDSDFVEYFEEDDRGNKRLGPPSESDWLAVSVFIKFLKGFY 60

Query: 61  DATNKISGSLYVTSNVGFHQLYGIQFSLMKWSRNPNSILCNMASNMKKKFDKYWGSVEKI 120
           + T K+SGS YVTSNVG+ ++  IQF L KWS N NS+L  MA NMK KFDKYWGS+EK+
Sbjct: 61  ETTTKVSGSSYVTSNVGYKEINKIQFVLKKWSNNNNSVLSLMAMNMKAKFDKYWGSLEKM 120

Query: 121 NKLLFIVVVLDPRYKLDYVSYSFSTVYDASVVKEMVENVKIYLYRLYEFYKSHDKTKRGS 180
           NKL+F+ +V+DPRYKL Y++Y  S VY++ VVK++VE+VKIYLYRLY+FY+S        
Sbjct: 121 NKLMFVAMVIDPRYKLKYLTYCLSNVYESDVVKDVVESVKIYLYRLYDFYRSQHTPSTQI 180

Query: 181 SSTTTDSGGGSQQSSVVTSIDTAGDEDTDIQTGYKRRREEESSLEVEN 229
             +T D     +QS+ VT ++   DE+ D    +   REEESS+EVEN
Sbjct: 181 GHSTDD----LKQSNNVT-MEVENDEEVDPWITFCALREEESSMEVEN 223

[Close]

BLAST of Lcy05g019390 vs. NCBI nr
Match: XP_023536246.1 (zinc finger BED domain-containing protein RICESLEEPER 2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 249.2 bits (635), Expect = 3.4e-62
Identity = 128/232 (55.17%), Postives = 172/232 (74.14%), Query Frame = 0


Query: 1   MFDHAIQFEKAFKILEEEKTESDFVDYFEEDDHGNKRLGPPTAFDWENVKVFVKFLKKFY 60
           M DHA++FEKAFK+LE+E  E D+VDYF+E DHGNKR GPPT  DW+NV VFVKFLK FY
Sbjct: 156 MLDHALKFEKAFKVLEDE--ELDYVDYFKEGDHGNKRTGPPTIDDWKNVGVFVKFLKVFY 215

Query: 61  DATNKISGSLYVTSNVGFHQLYGIQFSLMKWSRNPNSILCNMASNMKKKFDKYWGSVEKI 120
           D   K+SGSLYVTSN  FH+L+GI+  L++WS N NS+L NM+SNMK K++KYWGSVE+I
Sbjct: 216 DVNAKMSGSLYVTSNSYFHELWGIRELLIQWSTNVNSVLSNMSSNMKVKYEKYWGSVERI 275

Query: 121 NKLLFIVVVLDPRYKLDYVSYSFSTVYDASVVKEMVENVKIYLYRLYEFYKSHDKTKRGS 180
           NKL+FI VVLDPRYKLDY+S+ FS +Y+ ++ K MV+ +K YL RLY++YK ++  +  +
Sbjct: 276 NKLIFIAVVLDPRYKLDYISFCFSNIYEDAMAKVMVDGIKNYLIRLYDYYKFYNNAQDHN 335

Query: 181 SSTTTDSGGGSQQSSVVTSIDTAGDEDTD----IQTGYKRRREEESSLEVEN 229
            S +         +S+   +DT  +E+      + + YKRRREE+ SLE++N
Sbjct: 336 QSKSR-----LTSNSMSMKMDTIDEENLSGSILVLSRYKRRREEQHSLELKN 380

[Close]

BLAST of Lcy05g019390 vs. NCBI nr
Match: TYK15892.1 (zinc finger BED domain-containing protein RICESLEEPER 2-like [Cucumis melo var. makuwa])

HSP 1 Score: 248.4 bits (633), Expect = 5.9e-62
Identity = 130/228 (57.02%), Postives = 167/228 (73.25%), Query Frame = 0


Query: 1   MFDHAIQFEKAFKILEEEKTESDFVDYFEEDDHGNKRLGPPTAFDWENVKVFVKFLKKFY 60
           M +H I+FEKAFKILEEEK +SDFV+YFEEDD  NKRLGPP+  DW  V VF+KFLK FY
Sbjct: 379 MLEHTIKFEKAFKILEEEKDDSDFVEYFEEDDRENKRLGPPSESDWLAVNVFIKFLKGFY 438

Query: 61  DATNKISGSLYVTSNVGFHQLYGIQFSLMKWSRNPNSILCNMASNMKKKFDKYWGSVEKI 120
           + T K+SGS YVTSNVG+ ++  IQF L KWS N NS+L  MA NMK KFDKYWG +EK+
Sbjct: 439 ETTTKVSGSSYVTSNVGYKEINKIQFVLKKWSNNNNSVLSLMAMNMKAKFDKYWGLLEKM 498

Query: 121 NKLLFIVVVLDPRYKLDYVSYSFSTVYDASVVKEMVENVKIYLYRLYEFYKSHDKTKRGS 180
           NKL+F+ +V+DPRYKL Y++Y  S VY++ VVK++VE+ KIYLYRLY+FYKS    +   
Sbjct: 499 NKLMFVTMVIDPRYKLKYLTYCLSNVYESDVVKDVVESTKIYLYRLYDFYKS----QHNP 558

Query: 181 SSTTTDSGGGSQQSSVVTSIDTAGDEDTDIQTGYKRRREEESSLEVEN 229
           S+    S    +QS+ VT ++   +E+ D    +   REEES++EVEN
Sbjct: 559 STQIGHSMDDLKQSNNVT-MEVENNEEVDPWITFCALREEESAMEVEN 601

[Close]

BLAST of Lcy05g019390 vs. TAIR 10
Match: AT3G42170.1 (BED zinc finger ;hAT family dimerisation domain )

HSP 1 Score: 63.2 bits (152), Expect = 3.2e-10
Identity = 50/188 (26.60%), Postives = 87/188 (46.28%), Query Frame = 0


Query: 40  PPTAFDWENVKVFVKFLKKFYDATNKISGSLYVTSNVGFHQLYGIQFSLMKWSRNPNSIL 99
           PP+A DW +V+    FLK  ++A + +  +   ++   FH+++  Q  L +     +  +
Sbjct: 429 PPSAEDWRHVEALCTFLKPLFEAVSTLQSTGNPSAVTFFHEVWKTQSDLSRAIAGEDPFV 488

Query: 100 CNMASNMKKKFDKYWGSVEKINKLLFIVVVLDPRYKLDYVSYSFSTVYDASVVKEMVENV 159
             +A  M++K DKYW      + +L + VV+DPR+K+  V +SFS ++     K  ++ V
Sbjct: 489 TGIAKTMQEKVDKYW---RDCSLVLAMAVVMDPRFKMKLVEFSFSKIFGEDAGKN-IKTV 548

Query: 160 KIYLYRLYEFYKSHDKTKRGSSSTTTDSGGGSQQSSVVTSIDTAGDEDTDIQ--TGYKRR 219
              ++ L+  Y +       S   TT  GG           D   D DT I   TG   +
Sbjct: 549 DDGIHELFTEYMA-----LPSPQNTTSEGG---------KADGLSDFDTYIMETTGQNLK 598

Query: 220 REEESSLE 226
            E +  L+
Sbjct: 609 SELDQYLD 598

The following BLAST results are available for this feature:

BLAST of Lcy05g019390 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
B9FJG3	2.8e-14	27.32	Zinc finger BED domain-containing protein RICESLEEPER 1 OS=Oryza sativa subsp. j...	[more]
Q6AVI0	2.3e-13	27.83	Zinc finger BED domain-containing protein RICESLEEPER 2 OS=Oryza sativa subsp. j...	[more]
Q75HY5	1.5e-12	30.07	Zinc finger BED domain-containing protein RICESLEEPER 3 OS=Oryza sativa subsp. j...	[more]
P08770	2.2e-11	29.93	Putative AC transposase OS=Zea mays OX=4577 PE=2 SV=2	[more]
Q0JMB2	2.4e-10	27.38	Zinc finger BED domain-containing protein RICESLEEPER 4 OS=Oryza sativa subsp. j...	[more]

BLAST of Lcy05g019390 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DSA5	1.9e-66	60.09	Zinc finger BED domain-containing protein RICESLEEPER 2-like OS=Cucumis melo var...	[more]
A0A5A7UR09	9.4e-66	59.65	Zinc finger BED domain-containing protein RICESLEEPER 2-like OS=Cucumis melo var...	[more]
A0A5D3CE24	2.7e-65	58.77	Zinc finger BED domain-containing protein RICESLEEPER 2-like OS=Cucumis melo var...	[more]
A0A5D3CWJ0	2.8e-62	57.02	Zinc finger BED domain-containing protein RICESLEEPER 2-like OS=Cucumis melo var...	[more]
A0A5A7UBZ7	2.8e-62	57.02	Zinc finger BED domain-containing protein RICESLEEPER 2-like OS=Cucumis melo var...	[more]

BLAST of Lcy05g019390 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK26463.1	3.9e-66	60.09	zinc finger BED domain-containing protein RICESLEEPER 2-like [Cucumis melo var. ...	[more]
KAA0056011.1	1.9e-65	59.65	zinc finger BED domain-containing protein RICESLEEPER 2-like [Cucumis melo var. ...	[more]
TYK09522.1	5.7e-65	58.77	zinc finger BED domain-containing protein RICESLEEPER 2-like [Cucumis melo var. ...	[more]
XP_023536246.1	3.4e-62	55.17	zinc finger BED domain-containing protein RICESLEEPER 2-like [Cucurbita pepo sub...	[more]
TYK15892.1	5.9e-62	57.02	zinc finger BED domain-containing protein RICESLEEPER 2-like [Cucumis melo var. ...	[more]

BLAST of Lcy05g019390 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G42170.1	3.2e-10	26.60	BED zinc finger ;hAT family dimerisation domain	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025525	hAT-like transposase, RNase-H fold	PFAM	PF14372	DUF4413	coord: 67..170 e-value: 5.0E-24 score: 84.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 181..206
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 208..225
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 175..231
None	No IPR available	PANTHER	PTHR23272	BED FINGER-RELATED	coord: 8..196
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 24..187

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy05g019390.1	Lcy05g019390.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0110165	cellular anatomical entity
molecular_function	GO:0003677	DNA binding