Lcy05g019270 (gene) Sponge gourd (P93075) v1

Overview
NameLcy05g019270
Typegene
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionReverse transcriptase domain-containing protein
LocationChr05: 40662336 .. 40663049 (+)
RNA-Seq ExpressionLcy05g019270
SyntenyLcy05g019270
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTCTCGGCCAATGGGGTTTGGGAGGAGAATGAAGAAAGAATTGTCTCAATTGCTACTGATTACTTCAAATCTCTTTTCCAATCCTCAAATCCAAAAGCAAGAGCTATGAAGCATATCACCGATCTCATCCAACCAAAGTTAACAGAGGAAATGAGAAGAGAGTTGGATCTCCCTTATACTAGGGGGGAAGTGGAAGCGGCAATGAAAAGTATCAGCCCAAGTAAAGCTCCGGGAGTTGATGGTACTCACGCATCTTTCTACCAAACTTATTGGGACATAGTGGGGGAAGACACAATGGAGGTTTGCCTTCAAATTCTCAACGAGGAGGCAAACATTACACCCTTGAACAAAACAGCGATAAAACTTATCCCTAAAGTTAAAGAGGCAAAATATATGCACGAATTCAGACCAATCAGTCTTTGCAATGTGAGCTACAATATCATTGCAAAAACAATAGCAAATAGATTTAAAAAAGTGCTGGACAAAGTGATATCCCCCACACAGGCAGCGTTTATCCCAGGTAGATTAATCTCAGACAATGTTATTATAGGATTTGAGTGCATTCATGCCATCAACAACAGGAAAAAAGGCAAGGAAGGTCACGTGGCCCTCAAACTCGATATGAGTAAGGCCTACGATCGGGTCAAATGGAGTTTTATCAGAGAGATGTTGTCAAGGATGGGGTTTAGTGAAAATGGACAAAGAACATAA

mRNA sequence

ATGTTCTCGGCCAATGGGGTTTGGGAGGAGAATGAAGAAAGAATTGTCTCAATTGCTACTGATTACTTCAAATCTCTTTTCCAATCCTCAAATCCAAAAGCAAGAGCTATGAAGCATATCACCGATCTCATCCAACCAAAGTTAACAGAGGAAATGAGAAGAGAGTTGGATCTCCCTTATACTAGGGGGGAAGTGGAAGCGGCAATGAAAAGTATCAGCCCAAGTAAAGCTCCGGGAGTTGATGGTACTCACGCATCTTTCTACCAAACTTATTGGGACATAGTGGGGGAAGACACAATGGAGGTTTGCCTTCAAATTCTCAACGAGGAGGCAAACATTACACCCTTGAACAAAACAGCGATAAAACTTATCCCTAAAGTTAAAGAGGCAAAATATATGCACGAATTCAGACCAATCAGTCTTTGCAATGTGAGCTACAATATCATTGCAAAAACAATAGCAAATAGATTTAAAAAAGTGCTGGACAAAGTGATATCCCCCACACAGGCAGCGTTTATCCCAGGTAGATTAATCTCAGACAATGTTATTATAGGATTTGAGTGCATTCATGCCATCAACAACAGGAAAAAAGGCAAGGAAGGTCACGTGGCCCTCAAACTCGATATGAGTAAGGCCTACGATCGGGTCAAATGGAGTTTTATCAGAGAGATGTTGTCAAGGATGGGGTTTAGTGAAAATGGACAAAGAACATAA

Coding sequence (CDS)

ATGTTCTCGGCCAATGGGGTTTGGGAGGAGAATGAAGAAAGAATTGTCTCAATTGCTACTGATTACTTCAAATCTCTTTTCCAATCCTCAAATCCAAAAGCAAGAGCTATGAAGCATATCACCGATCTCATCCAACCAAAGTTAACAGAGGAAATGAGAAGAGAGTTGGATCTCCCTTATACTAGGGGGGAAGTGGAAGCGGCAATGAAAAGTATCAGCCCAAGTAAAGCTCCGGGAGTTGATGGTACTCACGCATCTTTCTACCAAACTTATTGGGACATAGTGGGGGAAGACACAATGGAGGTTTGCCTTCAAATTCTCAACGAGGAGGCAAACATTACACCCTTGAACAAAACAGCGATAAAACTTATCCCTAAAGTTAAAGAGGCAAAATATATGCACGAATTCAGACCAATCAGTCTTTGCAATGTGAGCTACAATATCATTGCAAAAACAATAGCAAATAGATTTAAAAAAGTGCTGGACAAAGTGATATCCCCCACACAGGCAGCGTTTATCCCAGGTAGATTAATCTCAGACAATGTTATTATAGGATTTGAGTGCATTCATGCCATCAACAACAGGAAAAAAGGCAAGGAAGGTCACGTGGCCCTCAAACTCGATATGAGTAAGGCCTACGATCGGGTCAAATGGAGTTTTATCAGAGAGATGTTGTCAAGGATGGGGTTTAGTGAAAATGGACAAAGAACATAA

Protein sequence

MFSANGVWEENEERIVSIATDYFKSLFQSSNPKARAMKHITDLIQPKLTEEMRRELDLPYTRGEVEAAMKSISPSKAPGVDGTHASFYQTYWDIVGEDTMEVCLQILNEEANITPLNKTAIKLIPKVKEAKYMHEFRPISLCNVSYNIIAKTIANRFKKVLDKVISPTQAAFIPGRLISDNVIIGFECIHAINNRKKGKEGHVALKLDMSKAYDRVKWSFIREMLSRMGFSENGQRT
Homology
BLAST of Lcy05g019270 vs. ExPASy Swiss-Prot
Match: P14381 (Transposon TX1 uncharacterized 149 kDa protein OS=Xenopus laevis OX=8355 PE=4 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 8.0e-25
Identity = 69/230 (30.00%), Postives = 117/230 (50.87%), Query Frame = 0

Query: 1   MFSANGVWEENEERIVSIATDYFKSLFQSSNPKARAMKHITDLIQPKLTEEMRRELDLPY 60
           +F+ +G   E+ E I   A  ++++LF        A + + D + P ++E  +  L+ P 
Sbjct: 391 LFAEDGTPLEDPEAIRDRARSFYQNLFSPDPISPDACEELWDGL-PVVSERRKERLETPI 450

Query: 61  TRGEVEAAMKSISPSKAPGVDGTHASFYQTYWDIVGEDTMEVCLQILNEEANITPLNKTA 120
           T  E+  A++ +  +K+PG+DG    F+Q +WD +G D   V  +   +        +  
Sbjct: 451 TLDELSQALRLMPHNKSPGLDGLTIEFFQFFWDTLGPDFHRVLTEAFKKGELPLSCRRAV 510

Query: 121 IKLIPKVKEAKYMHEFRPISLCNVSYNIIAKTIANRFKKVLDKVISPTQAAFIPGRLISD 180
           + L+PK  + + +  +RP+SL +  Y I+AK I+ R K VL +VI P Q+  +PGR I D
Sbjct: 511 LSLLPKKGDLRLIKNWRPVSLLSTDYKIVAKAISLRLKSVLAEVIHPDQSYTVPGRTIFD 570

Query: 181 NVIIGFECIHAINNRKKGKEGHVALKLDMSKAYDRVKWSFIREMLSRMGF 231
           NV +  + +H    R+ G      L LD  KA+DRV   ++   L    F
Sbjct: 571 NVFLIRDLLHFA--RRTGL-SLAFLSLDQEKAFDRVDHQYLIGTLQAYSF 616

BLAST of Lcy05g019270 vs. ExPASy Swiss-Prot
Match: P11369 (LINE-1 retrotransposable element ORF2 protein OS=Mus musculus OX=10090 GN=Pol PE=1 SV=2)

HSP 1 Score: 106.3 bits (264), Expect = 4.8e-22
Identity = 72/223 (32.29%), Postives = 113/223 (50.67%), Query Frame = 0

Query: 13  ERIVSIATDYFKSLFQSSNPKARAMKHITDLIQ-PKLTEEMRRELDLPYTRGEVEAAMKS 72
           E I +    ++K L+ +       M    D  Q PKL ++    L+ P +  E+EA + S
Sbjct: 412 EEIQNTIRSFYKRLYSTKLENLDEMDKFLDRYQVPKLNQDQVDHLNSPISPKEIEAVINS 471

Query: 73  ISPSKAPGVDGTHASFYQTYWDIVGEDTMEVCLQILNE-EANITPLN---KTAIKLIPK- 132
           +   K+PG DG  A FYQT+     ED + +  ++ ++ E   T  N   +  I LIPK 
Sbjct: 472 LPTKKSPGPDGFSAEFYQTF----KEDLIPILHKLFHKIEVEGTLPNSFYEATITLIPKP 531

Query: 133 VKEAKYMHEFRPISLCNVSYNIIAKTIANRFKKVLDKVISPTQAAFIPGRLISDNVIIGF 192
            K+   +  FRPISL N+   I+ K +ANR ++ +  +I P Q  FIPG     N+    
Sbjct: 532 QKDPTKIENFRPISLMNIDAKILNKILANRIQEHIKAIIHPDQVGFIPGMQGWFNIRKSI 591

Query: 193 ECIHAINNRKKGKEGHVALKLDMSKAYDRVKWSFIREMLSRMG 230
             IH IN  K   + H+ + LD  KA+D+++  F+ ++L R G
Sbjct: 592 NVIHYINKLK--DKNHMIISLDAEKAFDKIQHPFMIKVLERSG 628

BLAST of Lcy05g019270 vs. ExPASy Swiss-Prot
Match: O00370 (LINE-1 retrotransposable element ORF2 protein OS=Homo sapiens OX=9606 PE=1 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 1.0e-19
Identity = 64/211 (30.33%), Postives = 104/211 (49.29%), Query Frame = 0

Query: 21  DYFKSLFQSSNPKARAMKHITDLIQ-PKLTEEMRRELDLPYTRGEVEAAMKSISPSKAPG 80
           +Y+K L+ +       M    D    P+L +E    L+ P T  E+ A + S+   K+PG
Sbjct: 413 EYYKHLYANKLENLEEMDTFLDTYTLPRLNQEEVESLNRPITGSEIVAIINSLPTKKSPG 472

Query: 81  VDGTHASFYQTYWDIVGEDTMEVCLQILNEEANITPLNKTAIKLIPKV-KEAKYMHEFRP 140
            DG  A FYQ Y + +    +++   I  E        + +I LIPK  ++      FRP
Sbjct: 473 PDGFTAEFYQRYKEELVPFLLKLFQSIEKEGILPNSFYEASIILIPKPGRDTTKKENFRP 532

Query: 141 ISLCNVSYNIIAKTIANRFKKVLDKVISPTQAAFIPGRLISDNVIIGFECIHAINNRKKG 200
           ISL N+   I+ K +ANR ++ + K+I   Q  FIPG     N+      I  IN  K  
Sbjct: 533 ISLMNIDAKILNKILANRIQQHIKKLIHHDQVGFIPGMQGWFNIRKSINVIQHINRAK-- 592

Query: 201 KEGHVALKLDMSKAYDRVKWSFIREMLSRMG 230
            + HV + +D  KA+D+++  F+ + L+++G
Sbjct: 593 DKNHVIISIDAEKAFDKIQQPFMLKTLNKLG 621

BLAST of Lcy05g019270 vs. ExPASy Swiss-Prot
Match: P08548 (LINE-1 reverse transcriptase homolog OS=Nycticebus coucang OX=9470 PE=4 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 1.2e-17
Identity = 64/224 (28.57%), Postives = 111/224 (49.55%), Query Frame = 0

Query: 15  IVSIATDYFKSLFQSSNPKARAMKHITDLIQ----PKLTEEMRRELDLPYTRGEVEAAMK 74
           I  I  +Y+K L+   + K   +K I   ++    P+L+++    L+ P +  E+ + ++
Sbjct: 406 IQKILNEYYKKLY---SHKYENLKEIDQYLEACHLPRLSQKEVEMLNRPISSSEIASTIQ 465

Query: 75  SISPSKAPGVDGTHASFYQTYWDIVGEDTMEVCLQILN--EEANITP--LNKTAIKLIPK 134
           ++   K+PG DG  + FYQT+     E+ + + L +    E+  I P    +  I LIPK
Sbjct: 466 NLPKKKSPGPDGFTSEFYQTF----KEELVPILLNLFQNIEKEGILPNTFYEANITLIPK 525

Query: 135 V-KEAKYMHEFRPISLCNVSYNIIAKTIANRFKKVLDKVISPTQAAFIPGRLISDNVIIG 194
             K+      +RPISL N+   I+ K + NR ++ + K+I   Q  FIPG     N+   
Sbjct: 526 PGKDPTRKENYRPISLMNIDAKILNKILTNRIQQHIKKIIHHDQVGFIPGSQGWFNIRKS 585

Query: 195 FECIHAINNRKKGKEGHVALKLDMSKAYDRVKWSFIREMLSRMG 230
              I  IN  K   + H+ L +D  KA+D ++  F+   L ++G
Sbjct: 586 INVIQHINKLK--NKDHMILSIDAEKAFDNIQHPFMIRTLKKIG 620

BLAST of Lcy05g019270 vs. ExPASy TrEMBL
Match: A0A2N9GPZ7 (Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS29430 PE=4 SV=1)

HSP 1 Score: 235.3 bits (599), Expect = 2.5e-58
Identity = 111/228 (48.68%), Postives = 159/228 (69.74%), Query Frame = 0

Query: 5   NGVWEENEERIVSIATDYFKSLFQSSNPKARAMKHITDLIQPKLTEEMRRELDLPYTRGE 64
           +GVW+  + +I  IA DYF+ +F SSNP A ++  +   ++  +T  M  +L   +T+ E
Sbjct: 248 DGVWQTEKTKIAEIAVDYFQGIFTSSNPSAESITTVLQGMESVVTNAMNDQLQAEFTKDE 307

Query: 65  VEAAMKSISPSKAPGVDGTHASFYQTYWDIVGEDTMEVCLQILNEEANITPLNKTAIKLI 124
           V  A+K + P+KAPG DG  A FYQTYWDIVG +  +  L IL+    +  +N T I LI
Sbjct: 308 VSLALKQMYPTKAPGPDGMSAIFYQTYWDIVGPEVTQAILSILHSGYMLRKINYTHIALI 367

Query: 125 PKVKEAKYMHEFRPISLCNVSYNIIAKTIANRFKKVLDKVISPTQAAFIPGRLISDNVII 184
           PKVK  + + +FRPISLCNV Y I++K +ANR KKVL  VIS  Q+AF+PGRLI+DNV++
Sbjct: 368 PKVKNPENITDFRPISLCNVIYKIVSKVLANRLKKVLPFVISEAQSAFVPGRLITDNVLV 427

Query: 185 GFECIHAINNRKKGKEGHVALKLDMSKAYDRVKWSFIREMLSRMGFSE 233
            FE +H+++ ++KGK+G +ALKLDMSKAYDRV+W F+  ++  MGF++
Sbjct: 428 AFEVMHSMSLKRKGKKGQMALKLDMSKAYDRVEWVFLESIMRGMGFAK 475

BLAST of Lcy05g019270 vs. ExPASy TrEMBL
Match: A0A2N9IPS8 (Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS55418 PE=4 SV=1)

HSP 1 Score: 235.3 bits (599), Expect = 2.5e-58
Identity = 111/228 (48.68%), Postives = 159/228 (69.74%), Query Frame = 0

Query: 5    NGVWEENEERIVSIATDYFKSLFQSSNPKARAMKHITDLIQPKLTEEMRRELDLPYTRGE 64
            +GVW+  + +I  IA DYF+ +F SSNP A ++  +   ++  +T  M  +L   +T+ E
Sbjct: 823  DGVWQTEKTKIAEIAVDYFQGIFTSSNPSAESITTVLQGMESVVTNAMNDQLQAEFTKDE 882

Query: 65   VEAAMKSISPSKAPGVDGTHASFYQTYWDIVGEDTMEVCLQILNEEANITPLNKTAIKLI 124
            V  A+K + P+KAPG DG  A FYQTYWDIVG +  +  L IL+    +  +N T I LI
Sbjct: 883  VSLALKQMYPTKAPGPDGMSAIFYQTYWDIVGPEVTQAILSILHSGYMLRKINYTHIALI 942

Query: 125  PKVKEAKYMHEFRPISLCNVSYNIIAKTIANRFKKVLDKVISPTQAAFIPGRLISDNVII 184
            PKVK  + + +FRPISLCNV Y I++K +ANR KKVL  VIS  Q+AF+PGRLI+DNV++
Sbjct: 943  PKVKNPENITDFRPISLCNVIYKIVSKVLANRLKKVLPFVISEAQSAFVPGRLITDNVLV 1002

Query: 185  GFECIHAINNRKKGKEGHVALKLDMSKAYDRVKWSFIREMLSRMGFSE 233
             FE +H+++ ++KGK+G +ALKLDMSKAYDRV+W F+  ++  MGF++
Sbjct: 1003 AFEVMHSMSLKRKGKKGQMALKLDMSKAYDRVEWVFLESIMRGMGFAK 1050

BLAST of Lcy05g019270 vs. ExPASy TrEMBL
Match: A0A803P614 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 227.6 bits (579), Expect = 5.3e-56
Identity = 108/227 (47.58%), Postives = 159/227 (70.04%), Query Frame = 0

Query: 6    GVWEENEERIVSIATDYFKSLFQSSNPKARAMKHITDLIQPKLTEEMRRELDLPYTRGEV 65
            G+   +   ++S+   YF+++FQ++     A+  + D I   ++ +M   L  P+TR EV
Sbjct: 834  GLKVHSRSDLISVIESYFQNIFQAAPMDDDALSSVLDTIPVMVSADMNHGLTQPFTRAEV 893

Query: 66   EAAMKSISPSKAPGVDGTHASFYQTYWDIVGEDTMEVCLQILNEEANITPLNKTAIKLIP 125
            +AA++S+SP K+PG+DG  A FYQ +WD+VG+      L +LNE A+ TPLN+T I LIP
Sbjct: 894  DAALQSMSPDKSPGIDGMSAMFYQQHWDLVGDLVSRAVLGVLNEGADPTPLNRTIITLIP 953

Query: 126  KVKEAKYMHEFRPISLCNVSYNIIAKTIANRFKKVLDKVISPTQAAFIPGRLISDNVIIG 185
            K K+ + M ++RPISLCNV   +I K +  RFK VL  VIS TQ+AF+P RLI+DN+++ 
Sbjct: 954  KNKKPQSMKDYRPISLCNVISKLITKVLVARFKVVLPHVISETQSAFLPNRLITDNILVA 1013

Query: 186  FECIHAINNRKKGKEGHVALKLDMSKAYDRVKWSFIREMLSRMGFSE 233
            FE +HAI NR  G++G V+LKLDMSKA+DRV+WSFI+ ++ +MGF+E
Sbjct: 1014 FELVHAIKNRTAGRKGIVSLKLDMSKAFDRVEWSFIQAVMRKMGFAE 1060

BLAST of Lcy05g019270 vs. ExPASy TrEMBL
Match: F4NCI4 (Reverse transcriptase domain-containing protein OS=Beta vulgaris subsp. vulgaris OX=3555 PE=4 SV=1)

HSP 1 Score: 227.6 bits (579), Expect = 5.3e-56
Identity = 108/225 (48.00%), Postives = 153/225 (68.00%), Query Frame = 0

Query: 6   GVWEENEERIVSIATDYFKSLFQSSNPKARAMKHITDLIQPKLTEEMRRELDLPYTRGEV 65
           G W E+E+ +      YF++LFQS N     M  I ++++P++T+E+  +LD P+ R EV
Sbjct: 385 GEWFEDEDDVTECFAHYFENLFQSGN--NCEMDPILNIVKPQITDELGTQLDAPFRREEV 444

Query: 66  EAAMKSISPSKAPGVDGTHASFYQTYWDIVGEDTMEVCLQILNEEANITPLNKTAIKLIP 125
            AA+  + P+KAPG DG +A FYQ +WD +GED     L +LN   NI  +N+T I LIP
Sbjct: 445 SAALAQMHPNKAPGPDGMNALFYQHFWDTIGEDVTTKVLNMLNNVDNIGAVNQTHIVLIP 504

Query: 126 KVKEAKYMHEFRPISLCNVSYNIIAKTIANRFKKVLDKVISPTQAAFIPGRLISDNVIIG 185
           K K  +   +FRPISLCNV Y I+AK +ANR K VL  VI  +Q+ F+PGRLI+DNV++ 
Sbjct: 505 KKKHCESPVDFRPISLCNVLYKIVAKVLANRMKMVLPMVIHESQSGFVPGRLITDNVLVA 564

Query: 186 FECIHAINNRKKGKEGHVALKLDMSKAYDRVKWSFIREMLSRMGF 231
           +EC H +  +K GK+G++ LKLDMSKAYDRV+W F+  M+ ++GF
Sbjct: 565 YECFHFLRKKKTGKKGYLGLKLDMSKAYDRVEWCFLENMMLKLGF 607

BLAST of Lcy05g019270 vs. ExPASy TrEMBL
Match: A0A2N9I335 (Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS48349 PE=4 SV=1)

HSP 1 Score: 226.5 bits (576), Expect = 1.2e-55
Identity = 110/228 (48.25%), Postives = 158/228 (69.30%), Query Frame = 0

Query: 6   GVWEENEERIVSIATDYFKSLFQSSNPKARAMKHITDLIQPKLTEEMRRELDLPYTRGEV 65
           GV + ++ ++ +IA DYF+S+F SSNP    +    D ++  +TEEM   L   +   EV
Sbjct: 278 GVLQTDKIKMANIAVDYFQSIFSSSNPGDETINSCLDGLERVVTEEMNNMLLEDFNSEEV 337

Query: 66  EAAMKSISPSKAPGVDGTHASFYQTYWDIVGEDTMEVCLQILNEEANITPLNKTAIKLIP 125
             A+K + P+KAPG DG  A FYQTYWDIVG +  +  L IL+    +  +N T I LIP
Sbjct: 338 SQALKQMYPTKAPGPDGMSAVFYQTYWDIVGPEVTQAILSILHSGYMVNKINYTHIALIP 397

Query: 126 KVKEAKYMHEFRPISLCNVSYNIIAKTIANRFKKVLDKVISPTQAAFIPGRLISDNVIIG 185
           KVK  + + +FRPISLCNV Y I++K +ANR KKVL  VIS +Q+AF+PGRLI+DNV++ 
Sbjct: 398 KVKNPERITDFRPISLCNVIYKIVSKILANRLKKVLPYVISESQSAFVPGRLITDNVLVA 457

Query: 186 FECIHAINNRKKGKEGHVALKLDMSKAYDRVKWSFIREMLSRMGFSEN 234
           FE +H+++ ++ G+ G +ALKLDMSKAYDRV+W F+  ++ R+GF+E+
Sbjct: 458 FEVMHSMSLKRIGRRGQMALKLDMSKAYDRVEWVFVEAIMRRLGFAED 505

BLAST of Lcy05g019270 vs. NCBI nr
Match: XP_023881891.1 (uncharacterized protein LOC111994244 [Quercus suber])

HSP 1 Score: 233.0 bits (593), Expect = 2.6e-57
Identity = 107/228 (46.93%), Postives = 157/228 (68.86%), Query Frame = 0

Query: 5   NGVWEENEERIVSIATDYFKSLFQSSNPKARAMKHITDLIQPKLTEEMRRELDLPYTRGE 64
           NG W+++ E I  +A  YF++++ SS P    +  + D I   +TEEM   L   +TR E
Sbjct: 215 NGNWQDSTEGIAKVAVSYFQTIYSSSVP--TRISEVLDAIPTTVTEEMNHSLIQEFTREE 274

Query: 65  VEAAMKSISPSKAPGVDGTHASFYQTYWDIVGEDTMEVCLQILNEEANITPLNKTAIKLI 124
           +E A+  + P+KAPG DG  A F+Q YW+IVG D + + L +LN   ++  +NKT I L+
Sbjct: 275 IETALNQMHPTKAPGPDGMSAIFFQKYWNIVGNDIVCMVLDVLNSNMSMVEINKTNITLV 334

Query: 125 PKVKEAKYMHEFRPISLCNVSYNIIAKTIANRFKKVLDKVISPTQAAFIPGRLISDNVII 184
           PK+K    M +FRPISLCNV Y +I+K +ANR K +L ++IS  Q+AF+ GRLI+DNV++
Sbjct: 335 PKIKNPTKMSDFRPISLCNVVYKLISKVLANRLKNILPQIISENQSAFLSGRLITDNVLV 394

Query: 185 GFECIHAINNRKKGKEGHVALKLDMSKAYDRVKWSFIREMLSRMGFSE 233
            FE +H + ++K+GKEG  A+KLDMSKAYDRV+W FI++++ +MGF E
Sbjct: 395 AFELMHYLEHKKEGKEGFAAIKLDMSKAYDRVEWGFIKQVMEKMGFHE 440

BLAST of Lcy05g019270 vs. NCBI nr
Match: XP_030923330.1 (uncharacterized protein LOC115950239 [Quercus lobata])

HSP 1 Score: 231.9 bits (590), Expect = 5.8e-57
Identity = 112/228 (49.12%), Postives = 157/228 (68.86%), Query Frame = 0

Query: 3   SANGVWEENEERIVSIATDYFKSLFQSSNPKARAMKHITDLIQPKLTEEMRRELDLPYTR 62
           ++ G W EN E +  +A DYF +LFQ+       M+   D +  K+TE+MR  L   +T 
Sbjct: 774 NSQGQWVENLEEVGQVAADYFDNLFQAG--AGDQMEECLDAVDTKVTEDMREFLSNQFTA 833

Query: 63  GEVEAAMKSISPSKAPGVDGTHASFYQTYWDIVGEDTMEVCLQILNEEANITPLNKTAIK 122
            EV+AA+  + P+KAPG DG +A FYQ +W IVG+  +   L  LN    +  +N T I 
Sbjct: 834 EEVQAALFQMGPTKAPGPDGMNALFYQKFWHIVGDSVVSAVLDFLNNGNMLPEINHTNIV 893

Query: 123 LIPKVKEAKYMHEFRPISLCNVSYNIIAKTIANRFKKVLDKVISPTQAAFIPGRLISDNV 182
           LIPKV+  + M EFRPISLCNV Y II+K +ANR K+VL ++IS TQ+AF+PGRLI+DNV
Sbjct: 894 LIPKVQNPERMSEFRPISLCNVIYKIISKVLANRLKQVLPQIISSTQSAFVPGRLITDNV 953

Query: 183 IIGFECIHAINNRKKGKEGHVALKLDMSKAYDRVKWSFIREMLSRMGF 231
           ++ +E +H ++ RKKGK+G VALKLD+SKAYDRV+W F++ ++ +MGF
Sbjct: 954 LVAYETLHTMHARKKGKKGDVALKLDISKAYDRVEWHFLQSIMEKMGF 999

BLAST of Lcy05g019270 vs. NCBI nr
Match: XP_006491472.1 (uncharacterized protein LOC102626455 [Citrus sinensis])

HSP 1 Score: 229.9 bits (585), Expect = 2.2e-56
Identity = 111/226 (49.12%), Postives = 153/226 (67.70%), Query Frame = 0

Query: 6   GVWEENEERIVSIATDYFKSLFQSSNPKARAMKHITDLIQPKLTEEMRRELDLPYTRGEV 65
           G W ++ E I      +F+ LF SSNP    +      + PK+++EM   L+ P+T  ++
Sbjct: 469 GNWVDDPEGIEGEFCGFFQQLFTSSNPSQTQISEALKGLLPKVSQEMNTHLEEPFTPEDI 528

Query: 66  EAAMKSISPSKAPGVDGTHASFYQTYWDIVGEDTMEVCLQILNEEANITPLNKTAIKLIP 125
             A+  + P+KAPG DG  A+F+Q +W IVGE   + CL ILNE+  +  LN T I LIP
Sbjct: 529 TRALSEMCPTKAPGPDGLPAAFFQKHWQIVGEGLTKTCLHILNEQGTLDSLNHTFIALIP 588

Query: 126 KVKEAKYMHEFRPISLCNVSYNIIAKTIANRFKKVLDKVISPTQAAFIPGRLISDNVIIG 185
           KV++ + + EFRPISLCNV Y I+AK IANR K +L+ +ISP Q+AFIP RLI+DNVIIG
Sbjct: 589 KVEKPRKVMEFRPISLCNVVYRIVAKAIANRLKPILNHIISPNQSAFIPNRLITDNVIIG 648

Query: 186 FECIHAINNRKKGKEGHVALKLDMSKAYDRVKWSFIREMLSRMGFS 232
           +EC+H I   K  + G VALKLD+SKAYDRV+W+F+ + +S +GFS
Sbjct: 649 YECLHKIRLSKGRRNGLVALKLDISKAYDRVEWNFLEQTMSNLGFS 694

BLAST of Lcy05g019270 vs. NCBI nr
Match: XP_023899730.1 (uncharacterized protein LOC112011598 [Quercus suber])

HSP 1 Score: 229.2 bits (583), Expect = 3.8e-56
Identity = 110/229 (48.03%), Postives = 158/229 (69.00%), Query Frame = 0

Query: 5   NGVWEENEERIVSIATDYFKSLFQSSNPKARAMKHITDLIQPKLTEEMRRELDLPYTRGE 64
           NG+W+ENEE I  +  +Y+ +LF SSNP  R +  I + +QP +TEEMR  L  P+   E
Sbjct: 332 NGIWQENEEVISGLLIEYYANLFMSSNP--RNLDRILEGVQPVVTEEMRAALARPFIVEE 391

Query: 65  VEAAMKSISPSKAPGVDGTHASFYQTYWDIVGEDTMEVCLQILNEEANITPLNKTAIKLI 124
           VE A+K ++P KA G DG    FYQTYW  +G D  +  L  LN  + +  +N T I LI
Sbjct: 392 VECAIKDMAPLKALGSDGMPPLFYQTYWTDIGMDVSQAVLSCLNSRSILKAINHTFITLI 451

Query: 125 PKVKEAKYMHEFRPISLCNVSYNIIAKTIANRFKKVLDKVISPTQAAFIPGRLISDNVII 184
           PKV+  + + +FRPISLCNV Y I++K IA+R K +LD ++S TQ+AF+  RLI+DN++I
Sbjct: 452 PKVQNPERVSDFRPISLCNVIYKIVSKVIASRLKPLLDSIMSETQSAFVANRLITDNILI 511

Query: 185 GFECIHAINNRKKGKEGHVALKLDMSKAYDRVKWSFIREMLSRMGFSEN 234
            FE +H + N   GK+G++ALKLDMSKAY+R+KW+F+ ++L ++GF E+
Sbjct: 512 AFESLHHMKNNCSGKQGYMALKLDMSKAYNRMKWAFLEQILLKLGFHED 558

BLAST of Lcy05g019270 vs. NCBI nr
Match: XP_042974747.1 (uncharacterized protein LOC122306384 [Carya illinoinensis])

HSP 1 Score: 228.8 bits (582), Expect = 4.9e-56
Identity = 110/222 (49.55%), Postives = 151/222 (68.02%), Query Frame = 0

Query: 11  NEERIVSIATDYFKSLFQSSNPKARAMKHITDLIQPKLTEEMRRELDLPYTRGEVEAAMK 70
           N E I      YFK LFQS+NP    +     +++P++TE M   L   +TR E+E A+K
Sbjct: 262 NMEEIEGAFNAYFKELFQSTNPTQEELTKCLKVVEPRVTEGMNEMLSKKFTRPEIEEAIK 321

Query: 71  SISPSKAPGVDGTHASFYQTYWDIVGEDTMEVCLQILNEEANITPLNKTAIKLIPKVKEA 130
            + P K+PG DG  A+FYQ +W +VG++  E  L ILN       +N T I LIPKVK  
Sbjct: 322 HMGPLKSPGPDGLGANFYQNHWMVVGDNVSEAVLAILNSGEMEEWMNYTHIALIPKVKNP 381

Query: 131 KYMHEFRPISLCNVSYNIIAKTIANRFKKVLDKVISPTQAAFIPGRLISDNVIIGFECIH 190
             + E+RPISLCNV Y I++K IANRFKKVL+ +ISP Q+AFIPGRLISDN++I +E  H
Sbjct: 382 SKVSEYRPISLCNVVYKIVSKAIANRFKKVLEVIISPNQSAFIPGRLISDNIMIAYEAFH 441

Query: 191 AINNRKKGKEGHVALKLDMSKAYDRVKWSFIREMLSRMGFSE 233
           A+  R KG+ G +A+KLDMSKAYDR++W+F++ ++ ++GF E
Sbjct: 442 AMKTRHKGEVGSMAVKLDMSKAYDRIEWNFLKAIMKQLGFCE 483

BLAST of Lcy05g019270 vs. TAIR 10
Match: AT4G20520.1 (RNA binding;RNA-directed DNA polymerases )

HSP 1 Score: 78.6 bits (192), Expect = 7.7e-15
Identity = 34/80 (42.50%), Postives = 54/80 (67.50%), Query Frame = 0

Query: 153 IANRFKKVLDKVISPTQAAFIPGRLISDNVIIGFECIHAINNRKKGKEGHVALKLDMSKA 212
           +  R K ++  +I P QA+FIPGR+ +DN++   E +H++  RKKG +G + LKLD+ KA
Sbjct: 1   MVERLKPLMTNLIGPAQASFIPGRVSTDNIVFVQEAVHSM-RRKKGVKGWMLLKLDLEKA 60

Query: 213 YDRVKWSFIREMLSRMGFSE 233
           YDR++W ++ + L   GF E
Sbjct: 61  YDRIRWDYLEDTLISAGFPE 79

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
P143818.0e-2530.00Transposon TX1 uncharacterized 149 kDa protein OS=Xenopus laevis OX=8355 PE=4 SV... [more]
P113694.8e-2232.29LINE-1 retrotransposable element ORF2 protein OS=Mus musculus OX=10090 GN=Pol PE... [more]
O003701.0e-1930.33LINE-1 retrotransposable element ORF2 protein OS=Homo sapiens OX=9606 PE=1 SV=1[more]
P085481.2e-1728.57LINE-1 reverse transcriptase homolog OS=Nycticebus coucang OX=9470 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
A0A2N9GPZ72.5e-5848.68Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=F... [more]
A0A2N9IPS82.5e-5848.68Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=F... [more]
A0A803P6145.3e-5647.58Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1[more]
F4NCI45.3e-5648.00Reverse transcriptase domain-containing protein OS=Beta vulgaris subsp. vulgaris... [more]
A0A2N9I3351.2e-5548.25Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=F... [more]
Match NameE-valueIdentityDescription
XP_023881891.12.6e-5746.93uncharacterized protein LOC111994244 [Quercus suber][more]
XP_030923330.15.8e-5749.12uncharacterized protein LOC115950239 [Quercus lobata][more]
XP_006491472.12.2e-5649.12uncharacterized protein LOC102626455 [Citrus sinensis][more]
XP_023899730.13.8e-5648.03uncharacterized protein LOC112011598 [Quercus suber][more]
XP_042974747.14.9e-5649.55uncharacterized protein LOC122306384 [Carya illinoinensis][more]
Match NameE-valueIdentityDescription
AT4G20520.17.7e-1542.50RNA binding;RNA-directed DNA polymerases [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000477Reverse transcriptase domainPFAMPF00078RVT_1coord: 124..232
e-value: 4.1E-18
score: 65.7
NoneNo IPR availablePANTHERPTHR19446REVERSE TRANSCRIPTASEScoord: 4..233
NoneNo IPR availablePANTHERPTHR19446:SF440SUBFAMILY NOT NAMEDcoord: 4..233
NoneNo IPR availableCDDcd01650RT_nLTR_likecoord: 118..229
e-value: 6.99444E-30
score: 108.918
IPR043502DNA/RNA polymerase superfamilySUPERFAMILY56672DNA/RNA polymerasescoord: 48..230

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lcy05g019270.1Lcy05g019270.1mRNA