Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAGAGGAAGCAGTGTCTGACCAATTTCAGAAGTTGAAGCTAACAGAAGAAGAAAAGAAAGGCAAAGTGAAGGTGGAAGAAGATGACTTGGAAGATGTTAAGAAGGACTTCCAAATCACGGTGGGGTGCAAATTATTAACCTCCAAAACTATAATAGTCGAGTTCTTCAGGATGACGATGCCCAAGATCTGGGGCTTGGTAGGTAACGTTCAAATAGAAAAGGCAGGCATAAATGTCTTCATATGTAAGTTCAAGAATAGAAAGGACAAGCTGAGAATTGTGGAAGGGGGGCCGTGGATTTATGATAAAGCTTTATTGGTCTTTGATGAACTAAAGGGAAGCTGCTGCCCTACATCTTTAGAGTTCAGGTACGCTAAGTTTTGGTTCCATTTTCATAAATTACCATATGTGTTTTTTAACAGAAAATATGTGGAGGCGTTGGCAAACTCAGTGGGGGAATTTGAAAAGGTTGACACGGATGAAAATGGAAGGCAATGGGGGGAAACACTAAGAGTTAGAGTGAAGATAGATACATCAAAGCCCTTGAGAAGAGGAGCACAATTATTTGTGGGGACAACTGAAGAAGCCAAATGGATCCCAATAACCATAGAAAAACTTCCAGATTTCTATTATGGGTGTGGAAGAATGGGCCATGTTCAAAAAGATTGTGACGAGGAGGAAGAAGACAATACACAAAAGGCTCAATACGGGAGTTGGTTAAGAGAAGAATCTGTTACAAGAACCTAAGCCAAAAACAGAGGAGGGACGAGTAAAGGCAAATACAATAGAGACGGTGGGGAAAGAAAGGAAAAACTGGAATGATGGCTCAGACAGAGAGGATGAGTCGCTGGAAAAGGAAGATAGAAGCTGAGAAAGTCGCTAGAGCATGATCGGAGGGAGCAGACGCCACCGAAAGGGAAGGAACAATCAGAGAACAGTAAGATAATAAAAAAATGTCAGAGGGTGTTCAGAGATAGAGGAAAGAGTCATTGGAGTAGCAGAAAAGAAAAAGGGCAAAAGAGAGATTGATGAGACAGGAATGACTAAAGAGGAAATCTTGGAAAATAGGGGACAACTGGTTATCAGAGACAAAGAACGGTGGAAGTGGGTCCATTGGAAAAGTAACTTCTGATAATGGGAGTCAAAATAGGGGATTGTTTTATGGATCTGGATCGAAAATTCTAAAGGACAAAACACCAGAATATGAGTGTAAAGAGACCAAGAATAAGCAACCCACAAAAGCAAAGGCCCGCAACTTGAAAAAATGGAAGAGAATAGCCCGAAAAGACCTGGATAATATGGAAGAATCGGATCATGAAGAGATGAATGAGGGGAAAAAACACGGAATGGATATTGACGAGGCTGAAGGCAGTGCAAAAAGAAGTCGGACATAA
mRNA sequence
ATGGAAGAGGAAGCAGTGTCTGACCAATTTCAGAAGTTGAAGCTAACAGAAGAAGAAAAGAAAGGCAAAGTGAAGGTGGAAGAAGATGACTTGGAAGATGTTAAGAAGGACTTCCAAATCACGGTGGGGTGCAAATTATTAACCTCCAAAACTATAATAGTCGAGTTCTTCAGGATGACGATGCCCAAGATCTGGGGCTTGGTAGGTAACGTTCAAATAGAAAAGGCAGGCATAAATGTCTTCATATGTAAGTTCAAGAATAGAAAGGACAAGCTGAGAATTGTGGAAGGGGGGCCGTGGATTTATGATAAAGCTTTATTGGTCTTTGATGAACTAAAGGGAAGCTGCTGCCCTACATCTTTAGAGTTCAGGTACGCTAAGTTTTGGTTCCATTTTCATAAATTACCATATGTGTTTTTTAACAGAAAATATGTGGAGGCGTTGGCAAACTCAGTGGGGGAATTTGAAAAGGTTGACACGGATGAAAATGGAAGGCAATGGGGGGAAACACTAAGAGTTAGAGTGAAGATAGATACATCAAAGCCCTTGAGAAGAGGAGCACAATTATTTGTGGGGACAACTGAAGAAGCCAAATGGATCCCAATAACCATAGAAAAACTTCCAGATTTCTATTATGGGTGTGGAAGAATGGGCCATGTTCAAAAAGATTGTGACGAGGAGGAAGAAGACAATACACAAAAGGCTCAATACGGGAGGGACAACTGGTTATCAGAGACAAAGAACGGTGGAAGTGGGTCCATTGGAAAAGTAACTTCTGATAATGGGAGTCAAAATAGGGGATTGTTTTATGGATCTGGATCGAAAATTCTAAAGGACAAAACACCAGAATATGAGTGTAAAGAGACCAAGAATAAGCAACCCACAAAAGCAAAGGCCCGCAACTTGAAAAAATGGAAGAGAATAGCCCGAAAAGACCTGGATAATATGGAAGAATCGGATCATGAAGAGATGAATGAGGGGAAAAAACACGGAATGGATATTGACGAGGCTGAAGGCAGTGCAAAAAGAAGTCGGACATAA
Coding sequence (CDS)
ATGGAAGAGGAAGCAGTGTCTGACCAATTTCAGAAGTTGAAGCTAACAGAAGAAGAAAAGAAAGGCAAAGTGAAGGTGGAAGAAGATGACTTGGAAGATGTTAAGAAGGACTTCCAAATCACGGTGGGGTGCAAATTATTAACCTCCAAAACTATAATAGTCGAGTTCTTCAGGATGACGATGCCCAAGATCTGGGGCTTGGTAGGTAACGTTCAAATAGAAAAGGCAGGCATAAATGTCTTCATATGTAAGTTCAAGAATAGAAAGGACAAGCTGAGAATTGTGGAAGGGGGGCCGTGGATTTATGATAAAGCTTTATTGGTCTTTGATGAACTAAAGGGAAGCTGCTGCCCTACATCTTTAGAGTTCAGGTACGCTAAGTTTTGGTTCCATTTTCATAAATTACCATATGTGTTTTTTAACAGAAAATATGTGGAGGCGTTGGCAAACTCAGTGGGGGAATTTGAAAAGGTTGACACGGATGAAAATGGAAGGCAATGGGGGGAAACACTAAGAGTTAGAGTGAAGATAGATACATCAAAGCCCTTGAGAAGAGGAGCACAATTATTTGTGGGGACAACTGAAGAAGCCAAATGGATCCCAATAACCATAGAAAAACTTCCAGATTTCTATTATGGGTGTGGAAGAATGGGCCATGTTCAAAAAGATTGTGACGAGGAGGAAGAAGACAATACACAAAAGGCTCAATACGGGAGGGACAACTGGTTATCAGAGACAAAGAACGGTGGAAGTGGGTCCATTGGAAAAGTAACTTCTGATAATGGGAGTCAAAATAGGGGATTGTTTTATGGATCTGGATCGAAAATTCTAAAGGACAAAACACCAGAATATGAGTGTAAAGAGACCAAGAATAAGCAACCCACAAAAGCAAAGGCCCGCAACTTGAAAAAATGGAAGAGAATAGCCCGAAAAGACCTGGATAATATGGAAGAATCGGATCATGAAGAGATGAATGAGGGGAAAAAACACGGAATGGATATTGACGAGGCTGAAGGCAGTGCAAAAAGAAGTCGGACATAA
Protein sequence
MEEEAVSDQFQKLKLTEEEKKGKVKVEEDDLEDVKKDFQITVGCKLLTSKTIIVEFFRMTMPKIWGLVGNVQIEKAGINVFICKFKNRKDKLRIVEGGPWIYDKALLVFDELKGSCCPTSLEFRYAKFWFHFHKLPYVFFNRKYVEALANSVGEFEKVDTDENGRQWGETLRVRVKIDTSKPLRRGAQLFVGTTEEAKWIPITIEKLPDFYYGCGRMGHVQKDCDEEEEDNTQKAQYGRDNWLSETKNGGSGSIGKVTSDNGSQNRGLFYGSGSKILKDKTPEYECKETKNKQPTKAKARNLKKWKRIARKDLDNMEESDHEEMNEGKKHGMDIDEAEGSAKRSRT
Homology
BLAST of Lcy05g019140 vs. ExPASy TrEMBL
Match:
A0A5C7H9Y2 (CCHC-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_019269 PE=4 SV=1)
HSP 1 Score: 162.9 bits (411), Expect = 2.3e-36
Identity = 94/271 (34.69%), Postives = 153/271 (56.46%), Query Frame = 0
Query: 1 MEEEAVSDQFQKLKLTEEEKKGKVKVEEDDLED-VKKDFQITVGCKLLTSKTIIVEFFRM 60
ME + +S + +KL L ++ G ++ + L++ ++ +++ K +T+K I E F+
Sbjct: 1 MESDDISRKCEKLSL--DDDNGPIERIKGSLQERGEQSLSLSLIGKAITNKVINREAFKS 60
Query: 61 TMPKIWGLVGNVQIEKAGINVFICKFKNRKDKLRIVEGGPWIYDKALLVFDELKGSCCPT 120
T+ IW V +E GIN+F +F+N D+ RI+EGGPW++DK LLV E GS T
Sbjct: 61 TISTIWQTKNEVTMELMGINIFKFRFQNYWDRKRILEGGPWLFDKQLLVLREASGSEKVT 120
Query: 121 SLEFRYAKFWFHFHKLPYVFFNRKYVEALANSVGEFEKVDTDENGRQWGETLRVRVKIDT 180
L+FRY FW H LP NR+ L VG+ +++D E+G G+ +R+RV ID
Sbjct: 121 DLQFRYVPFWIQLHNLPLACLNREIGLHLGGLVGQVKEIDAGESGECVGQFIRIRVLIDV 180
Query: 181 SKPLRRGAQLFVGTTEEAKWIPITIEKLPDFYYGCGRMGHVQKDCDEEEEDNTQKAQYGR 240
PL+RG ++ +G E+ + I E+LP+F Y CG++GH+ +DC ++ T + +
Sbjct: 181 MNPLKRGLRVALGDDEKVNEVMICYERLPNFCYYCGKIGHLVRDCPLNTKEITSSSSFKF 240
Query: 241 DNWL---SETKNGGSGSIGKVTSDNGSQNRG 268
W+ S T++ G+G K S GS+ G
Sbjct: 241 GPWMRAVSRTRSKGTGE--KKNSPEGSREGG 267
BLAST of Lcy05g019140 vs. ExPASy TrEMBL
Match:
A0A6J1BSZ1 (uncharacterized protein LOC111005481 OS=Momordica charantia OX=3673 GN=LOC111005481 PE=4 SV=1)
HSP 1 Score: 157.1 bits (396), Expect = 1.3e-34
Identity = 87/249 (34.94%), Postives = 130/249 (52.21%), Query Frame = 0
Query: 8 DQFQKLKLTEEEKKGKVKVEEDDLEDVKKDFQITVGCKLLTSKTIIVEFFRMTMPKIWGL 67
++++ KLT EE K V ++ LE K ++++ CKLL+ ++I + T+ W L
Sbjct: 8 EEWKNFKLTSEEDKIAVDIDSSALEGTGKCLELSLICKLLSKRSISCTVLKNTLKIAWKL 67
Query: 68 -VGNVQIEKAGINVFICKFKNRKDKLRIVEGGPWIYDKALLVFDELKGSCCPTSLEFRYA 127
++ G N+F+ F D+ RI+ GPW +D+AL++ D P ++FR
Sbjct: 68 DCKAFSVDIIGFNIFLFNFNRSSDRNRILRMGPWTFDRALIIIDNPVSLTKPLDMDFRNV 127
Query: 128 KFWFHFHKLPYVFFNRKYVEALANSVGEFEKVDTDENGRQWGETLRVRVKIDTSKPLRRG 187
W HF L N+ L N++G FE V+++ N WG LRVRV+ D KPL RG
Sbjct: 128 SLWVHFFDLSLACMNKTMATRLGNAIGLFEDVESNANNFCWGSCLRVRVRFDVMKPLHRG 187
Query: 188 AQLFVGTTEEAKWIPITIEKLPDFYYGCGRMGHVQKDCDEEEEDNTQK-AQYGRDNWLSE 247
+L + WIPI E+LPDF Y CGR+ H+ KDC + D+ K QYG WL
Sbjct: 188 IKLNLDGPMGGCWIPIQYERLPDFRYHCGRLDHILKDCSDCCVDSVSKNLQYG--PWLRF 247
Query: 248 TKNGGSGSI 255
+ S +I
Sbjct: 248 QGHKNSSNI 254
BLAST of Lcy05g019140 vs. ExPASy TrEMBL
Match:
A0A6J1DU55 (uncharacterized protein LOC111023135 OS=Momordica charantia OX=3673 GN=LOC111023135 PE=4 SV=1)
HSP 1 Score: 153.7 bits (387), Expect = 1.4e-33
Identity = 83/242 (34.30%), Postives = 128/242 (52.89%), Query Frame = 0
Query: 1 MEEEAVSDQFQKLKLTEEEKKGKVKVEEDDLEDVKKDFQITVGCKLLTSKTIIVEFFRMT 60
M+ E + +QK KLT EE + + V+ D ++ ++ ++ KLL + I +
Sbjct: 1 MDHENLLADWQKFKLTSEEDEIAMDVDVDAVKMAEQGLAYSLVGKLLAKRIISADVLSRV 60
Query: 61 MPKIWGLVGNVQIEKAGINVFICKFKNRKDKLRIVEGGPWIYDKALLVFDELKGSCCPTS 120
+ W + + +E G N+F+ F D R+++ GPW +DKAL+V + S +
Sbjct: 61 LLLAWKVEHQLTVESIGKNLFLFHFCRECDMNRVMKTGPWFFDKALIVLQKPCSSKNISE 120
Query: 121 LEFRYAKFWFHFHKLPYVFFNRKYVEALANSVGEFEKVDTDENGRQWGETLRVRVKIDTS 180
LEF FW H LP + N+ L N++G F VD +E G WG +LR+RV ID +
Sbjct: 121 LEFNRVAFWIHLFDLPMSWLNKTMAIRLGNAIGNFVDVDCNEKGFSWGASLRIRVLIDIT 180
Query: 181 KPLRRGAQLFVGTTEEAKWIPITIEKLPDFYYGCGRMGHVQKDCDEE----EEDNTQKAQ 239
KPLRRG ++ + WIPI E+LPDF Y CG +GH DCD ++D+ ++
Sbjct: 181 KPLRRGIKINIDGPMGGCWIPIQYERLPDFCYFCGVIGHSSHDCDARYLAAQDDSRATSE 240
BLAST of Lcy05g019140 vs. ExPASy TrEMBL
Match:
A0A803LAB8 (Uncharacterized protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1)
HSP 1 Score: 152.1 bits (383), Expect = 4.1e-33
Identity = 90/244 (36.89%), Postives = 141/244 (57.79%), Query Frame = 0
Query: 1 MEEEAVSDQFQKLKLTEEEKK--GKVKVEEDDLEDVKKDFQITVGCKLLTSKTIIVEFFR 60
M ++ ++D F+K KLTEEE K G+ DD + K +++ KLLT+K VE +
Sbjct: 1 MADDLLND-FEKFKLTEEESKVIGENANSVDD-DGTKNQIALSLVGKLLTTKPFNVEAMK 60
Query: 61 MTMPKIWGLVGNVQIEKAGINVFICKFKNRKDKLRIVEGGPWIYDKALLVFDELKGSCCP 120
T+ +W L GNV I+ +N+F+ +F N DK ++++G PW +D LLV E+KG P
Sbjct: 61 HTLTSVWKLQGNVIIKMVEMNLFVFQFFNEADKEKVIDGCPWFFDGKLLVLKEIKGEEQP 120
Query: 121 TSLEFRYAKFWFHFHKLPYVFFNRKYVEALANSVGEFEKVDTDENGRQWGETLRVRVKID 180
+ +EF++A W +P+ N+K + + + +G F + D D + WGE LR++V ID
Sbjct: 121 SEVEFKFAPMWVRLLDVPFNKRNKKTMTEIGDFLGCFLEAD-DSDPLGWGEFLRIKVMID 180
Query: 181 TSKPLRRGAQLFVGTTEEAKWIPITIEKLPDFYYGCGRMGHVQKDC---DEEEEDNTQKA 239
+KPLRRG L G + +KW+ + E+L +F + CGR+ H + C DE +E N
Sbjct: 181 IAKPLRRGLFLATGPS-SSKWVALKYERLDEFCFFCGRLDHTEMGCSFKDEAKEVNADIV 240
BLAST of Lcy05g019140 vs. ExPASy TrEMBL
Match:
A0A2N9GF83 (CCHC-type domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS25970 PE=4 SV=1)
HSP 1 Score: 151.4 bits (381), Expect = 7.1e-33
Identity = 77/224 (34.38%), Postives = 127/224 (56.70%), Query Frame = 0
Query: 1 MEEEAVSDQFQKLKLTEEEKKGKVKVEEDDLEDVKKDFQITVGCKLLTSKTIIVEFFRMT 60
M EE V D +++ LTE+E G ++E+ + + K + KLL SK+ + T
Sbjct: 1 MVEELVED-WRRFSLTEDEAPG-FTIDEEAMGNAKAFGSHCLLGKLLISKSFNKAALKAT 60
Query: 61 MPKIWGLVGNVQIEKAGINVFICKFKNRKDKLRIVEGGPWIYDKALLVFDELKGSCCPTS 120
M +IWG+ + + G+N+F+ +F+N D R+ +G PW++D LLV +E GSC
Sbjct: 61 MLRIWGVACGIVAKDMGMNLFLFQFQNESDCKRVFKGSPWLFDNNLLVLNEFDGSCPANQ 120
Query: 121 LEFRYAKFWFHFHKLPYVFFNRKYVEALANSVGEFEKVDTDENGRQWGETLRVRVKIDTS 180
+ F FW H +P + ++ E + ++G EKVD E+G WG LRVR+ +D +
Sbjct: 121 ISFNSCCFWVQLHGVPLFYMTKQTGERVGGAIGIVEKVDVSEDGVGWGPFLRVRISVDIT 180
Query: 181 KPLRRGAQLFVGTTEEAKWIPITIEKLPDFYYGCGRMGHVQKDC 225
KP++RG + G+T + WI E+LP F + CG++GH +++C
Sbjct: 181 KPIQRGRLVTFGSTGQ-MWIAFKYERLPWFCFHCGKLGHGEREC 221
BLAST of Lcy05g019140 vs. NCBI nr
Match:
TXG54013.1 (hypothetical protein EZV62_019269 [Acer yangbiense])
HSP 1 Score: 162.9 bits (411), Expect = 4.8e-36
Identity = 94/271 (34.69%), Postives = 153/271 (56.46%), Query Frame = 0
Query: 1 MEEEAVSDQFQKLKLTEEEKKGKVKVEEDDLED-VKKDFQITVGCKLLTSKTIIVEFFRM 60
ME + +S + +KL L ++ G ++ + L++ ++ +++ K +T+K I E F+
Sbjct: 1 MESDDISRKCEKLSL--DDDNGPIERIKGSLQERGEQSLSLSLIGKAITNKVINREAFKS 60
Query: 61 TMPKIWGLVGNVQIEKAGINVFICKFKNRKDKLRIVEGGPWIYDKALLVFDELKGSCCPT 120
T+ IW V +E GIN+F +F+N D+ RI+EGGPW++DK LLV E GS T
Sbjct: 61 TISTIWQTKNEVTMELMGINIFKFRFQNYWDRKRILEGGPWLFDKQLLVLREASGSEKVT 120
Query: 121 SLEFRYAKFWFHFHKLPYVFFNRKYVEALANSVGEFEKVDTDENGRQWGETLRVRVKIDT 180
L+FRY FW H LP NR+ L VG+ +++D E+G G+ +R+RV ID
Sbjct: 121 DLQFRYVPFWIQLHNLPLACLNREIGLHLGGLVGQVKEIDAGESGECVGQFIRIRVLIDV 180
Query: 181 SKPLRRGAQLFVGTTEEAKWIPITIEKLPDFYYGCGRMGHVQKDCDEEEEDNTQKAQYGR 240
PL+RG ++ +G E+ + I E+LP+F Y CG++GH+ +DC ++ T + +
Sbjct: 181 MNPLKRGLRVALGDDEKVNEVMICYERLPNFCYYCGKIGHLVRDCPLNTKEITSSSSFKF 240
Query: 241 DNWL---SETKNGGSGSIGKVTSDNGSQNRG 268
W+ S T++ G+G K S GS+ G
Sbjct: 241 GPWMRAVSRTRSKGTGE--KKNSPEGSREGG 267
BLAST of Lcy05g019140 vs. NCBI nr
Match:
XP_022132681.1 (uncharacterized protein LOC111005481 [Momordica charantia])
HSP 1 Score: 157.1 bits (396), Expect = 2.7e-34
Identity = 87/249 (34.94%), Postives = 130/249 (52.21%), Query Frame = 0
Query: 8 DQFQKLKLTEEEKKGKVKVEEDDLEDVKKDFQITVGCKLLTSKTIIVEFFRMTMPKIWGL 67
++++ KLT EE K V ++ LE K ++++ CKLL+ ++I + T+ W L
Sbjct: 8 EEWKNFKLTSEEDKIAVDIDSSALEGTGKCLELSLICKLLSKRSISCTVLKNTLKIAWKL 67
Query: 68 -VGNVQIEKAGINVFICKFKNRKDKLRIVEGGPWIYDKALLVFDELKGSCCPTSLEFRYA 127
++ G N+F+ F D+ RI+ GPW +D+AL++ D P ++FR
Sbjct: 68 DCKAFSVDIIGFNIFLFNFNRSSDRNRILRMGPWTFDRALIIIDNPVSLTKPLDMDFRNV 127
Query: 128 KFWFHFHKLPYVFFNRKYVEALANSVGEFEKVDTDENGRQWGETLRVRVKIDTSKPLRRG 187
W HF L N+ L N++G FE V+++ N WG LRVRV+ D KPL RG
Sbjct: 128 SLWVHFFDLSLACMNKTMATRLGNAIGLFEDVESNANNFCWGSCLRVRVRFDVMKPLHRG 187
Query: 188 AQLFVGTTEEAKWIPITIEKLPDFYYGCGRMGHVQKDCDEEEEDNTQK-AQYGRDNWLSE 247
+L + WIPI E+LPDF Y CGR+ H+ KDC + D+ K QYG WL
Sbjct: 188 IKLNLDGPMGGCWIPIQYERLPDFRYHCGRLDHILKDCSDCCVDSVSKNLQYG--PWLRF 247
Query: 248 TKNGGSGSI 255
+ S +I
Sbjct: 248 QGHKNSSNI 254
BLAST of Lcy05g019140 vs. NCBI nr
Match:
XP_022156185.1 (uncharacterized protein LOC111023135 [Momordica charantia] >XP_022156186.1 uncharacterized protein LOC111023135 [Momordica charantia])
HSP 1 Score: 153.7 bits (387), Expect = 2.9e-33
Identity = 83/242 (34.30%), Postives = 128/242 (52.89%), Query Frame = 0
Query: 1 MEEEAVSDQFQKLKLTEEEKKGKVKVEEDDLEDVKKDFQITVGCKLLTSKTIIVEFFRMT 60
M+ E + +QK KLT EE + + V+ D ++ ++ ++ KLL + I +
Sbjct: 1 MDHENLLADWQKFKLTSEEDEIAMDVDVDAVKMAEQGLAYSLVGKLLAKRIISADVLSRV 60
Query: 61 MPKIWGLVGNVQIEKAGINVFICKFKNRKDKLRIVEGGPWIYDKALLVFDELKGSCCPTS 120
+ W + + +E G N+F+ F D R+++ GPW +DKAL+V + S +
Sbjct: 61 LLLAWKVEHQLTVESIGKNLFLFHFCRECDMNRVMKTGPWFFDKALIVLQKPCSSKNISE 120
Query: 121 LEFRYAKFWFHFHKLPYVFFNRKYVEALANSVGEFEKVDTDENGRQWGETLRVRVKIDTS 180
LEF FW H LP + N+ L N++G F VD +E G WG +LR+RV ID +
Sbjct: 121 LEFNRVAFWIHLFDLPMSWLNKTMAIRLGNAIGNFVDVDCNEKGFSWGASLRIRVLIDIT 180
Query: 181 KPLRRGAQLFVGTTEEAKWIPITIEKLPDFYYGCGRMGHVQKDCDEE----EEDNTQKAQ 239
KPLRRG ++ + WIPI E+LPDF Y CG +GH DCD ++D+ ++
Sbjct: 181 KPLRRGIKINIDGPMGGCWIPIQYERLPDFCYFCGVIGHSSHDCDARYLAAQDDSRATSE 240
BLAST of Lcy05g019140 vs. NCBI nr
Match:
XP_038708494.1 (uncharacterized protein LOC120003548 [Tripterygium wilfordii])
HSP 1 Score: 149.1 bits (375), Expect = 7.2e-32
Identity = 82/245 (33.47%), Postives = 132/245 (53.88%), Query Frame = 0
Query: 6 VSDQFQKLKLTEEEKKGKVKVEEDDLEDVKKDFQITVGCKLLTSKTIIVEFFRMTMPKIW 65
+ ++Q+L LT EE + V V D + D + ++ +LL+S++ E F TM IW
Sbjct: 60 LEQRWQRLSLTTEESEA-VVVARDSGTTKESDTRFSLFGRLLSSRSFNQEAFFATMKNIW 119
Query: 66 GLVGNVQIEKAGINVFICKFKNRKDKLRIVEGGPWIYDKALLVFDELKGSCCPTSLEFRY 125
V ++ G N+++ +F +++D ++++G PW +DK L+ E G+ P + F
Sbjct: 120 KPVRGMEFSTVGENLYLLRFFSKEDYNKVLDGSPWTFDKHPLLLKEYNGNLRPCDVVFEE 179
Query: 126 AKFWFHFHKLPYVFFNRKYVEALANSVGEFEKVDTDENGRQWGETLRVRVKIDTSKPLRR 185
W F+ LP+ N K L +VG EKVD D NG WG+ LRVR++ID +KPL+R
Sbjct: 180 MPLWVRFYNLPFKMMNEKVGLQLGAAVGRIEKVDLDRNGCGWGKYLRVRIRIDITKPLKR 239
Query: 186 GAQLFVGTTEEAKWIPITIEKLPDFYYGCGRMGHVQKDCDEEEEDNTQKAQYGRDNWLSE 245
+ A + + E+LP+F Y CGR+GHV +DC+ E + + YG +WL
Sbjct: 240 VVMVTGEEGGAAIRVGVQYERLPNFCYMCGRLGHVDRDCEVGETEFPEPKPYG--DWLRS 299
Query: 246 TKNGG 251
+ G
Sbjct: 300 SPPRG 301
BLAST of Lcy05g019140 vs. NCBI nr
Match:
VVA32948.1 (PREDICTED: DUF4283 domain-containing [Prunus dulcis])
HSP 1 Score: 147.9 bits (372), Expect = 1.6e-31
Identity = 91/289 (31.49%), Postives = 155/289 (53.63%), Query Frame = 0
Query: 3 EEAVSDQFQKLKLTEEEKKGKVKVEEDDLEDVKKDFQITVGCKLLTSKTIIVEFFRMTMP 62
+E ++ + L LTE+E+ ++V ++D++DV + ++++ K+LT+ E F+ TM
Sbjct: 2 DEVINSLEKTLILTEDERDA-IQVRQNDIDDVGERLKMSLVGKVLTTTAFNREAFKQTML 61
Query: 63 KIWGLVGNVQIEKAGINVFICKFKNRKDKLRIVEGGPWIYDKALLVFDELKGSCCPTSLE 122
KIW V V ++ G N+F+ F D+LR++ GPW +DKAL++ + GS P+ +
Sbjct: 62 KIWSTVREVVVKDIGENLFLFIFATEGDRLRVLRSGPWNFDKALVLLETPDGSIAPSKML 121
Query: 123 FRYAKFWFHFHKLPYVFFNRKYVEALANSVGEFEKVDTDENGRQWGETLRVRVKIDTSKP 182
+YA FW H +P + + NS G V +G+ G LR+RV +D SKP
Sbjct: 122 LKYADFWIQVHNVPLSCMSTNLGRQIGNSFGRCLDVIEGMDGKCLGRFLRLRVSVDVSKP 181
Query: 183 LRRGAQLFVGTTEEAKWIPITIEKLPDFYYGCGRMGHVQKDCDEEEEDNTQKAQYGRDNW 242
LRRG ++ + + ++ E+LP+F + CGR+GHV K+C ++ Q + +W
Sbjct: 182 LRRGKKMTL-PSGNTVFVEFRYERLPEFCFCCGRLGHVFKECSFVDQAAKQADEKPYGSW 241
Query: 243 LSETKNGGSGSIGKVTSDNGSQNRGLFYGSGSKILKDKTPEYECKETKN 292
L TK+ S G NGS + G G+ K+K E E +++ +
Sbjct: 242 LKATKDFHSIRAGNPKRTNGSGSEA--EGDGA---KEKEMEVEGQQSNS 283
BLAST of Lcy05g019140 vs. TAIR 10
Match:
AT5G36228.1 (nucleic acid binding;zinc ion binding )
HSP 1 Score: 68.6 bits (166), Expect = 1.2e-11
Identity = 48/191 (25.13%), Postives = 85/191 (44.50%), Query Frame = 0
Query: 45 KLLTSKTIIVEFFRMTMPKIWGLVGNVQIEKAGINVFICKFKNRKDKLRIVEGGPWIYDK 104
++L +T VE + +P WGL V F +F++ D L + PW++++
Sbjct: 42 RILNPQTQSVERAILELPYQWGLGTQVHGRILDDRCFQVRFRSEIDLLNGLRRAPWVFNE 101
Query: 105 ALLVFDELKGSCCPTSLEFRYAKFWFHFHKLPYVFFNRKYVEALANSVGEFEKVDTDENG 164
+ + PT + W H +P + + + VE +A+++GE +D +E
Sbjct: 102 WFIALQRWED--FPTEDFLTFIDVWVHIRGIPLPYVSERTVEIIASTLGEVVAMDFNEET 161
Query: 165 RQWGETLRVRVKIDTSKPLRRGAQLFVGTTEEAKWIPITIEKLPDFYYGCGRMGHVQKDC 224
+RV+V++D ++PLR ++ + E A I EKL C R+ H C
Sbjct: 162 TSQITFIRVKVRMDFTEPLRFFRRVRFASRERA-MIGFEYEKLQRVCTNCCRVNHQVSHC 221
Query: 225 ----DEEEEDN 232
+EE DN
Sbjct: 222 PYVVHQEEMDN 229
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A5C7H9Y2 | 2.3e-36 | 34.69 | CCHC-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_01926... | [more] |
A0A6J1BSZ1 | 1.3e-34 | 34.94 | uncharacterized protein LOC111005481 OS=Momordica charantia OX=3673 GN=LOC111005... | [more] |
A0A6J1DU55 | 1.4e-33 | 34.30 | uncharacterized protein LOC111023135 OS=Momordica charantia OX=3673 GN=LOC111023... | [more] |
A0A803LAB8 | 4.1e-33 | 36.89 | Uncharacterized protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | [more] |
A0A2N9GF83 | 7.1e-33 | 34.38 | CCHC-type domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS2597... | [more] |
Match Name | E-value | Identity | Description | |
TXG54013.1 | 4.8e-36 | 34.69 | hypothetical protein EZV62_019269 [Acer yangbiense] | [more] |
XP_022132681.1 | 2.7e-34 | 34.94 | uncharacterized protein LOC111005481 [Momordica charantia] | [more] |
XP_022156185.1 | 2.9e-33 | 34.30 | uncharacterized protein LOC111023135 [Momordica charantia] >XP_022156186.1 uncha... | [more] |
XP_038708494.1 | 7.2e-32 | 33.47 | uncharacterized protein LOC120003548 [Tripterygium wilfordii] | [more] |
VVA32948.1 | 1.6e-31 | 31.49 | PREDICTED: DUF4283 domain-containing [Prunus dulcis] | [more] |
Match Name | E-value | Identity | Description | |
AT5G36228.1 | 1.2e-11 | 25.13 | nucleic acid binding;zinc ion binding | [more] |