Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTATATCTAGCTCTCCATTTGAGAACCCTCCCATGCCTCAACTTTTCTTCTCAATTAAACACTACTGCGAAGGCTGCAAAATCGTGTCGGTTTCGTGTGTTTGAGGGAGATCAAATGTCTTGTAAATACGACAAGAACTCGAGCTTCAAGTTGCAAAGAGAGGAGATGAAAGCAATCTTTAGGGAGCATGACTTCAACGGCGATGGCCACTTGAGCATCCAAGAATTGTCGAGGGCGTTCGGGACGCTCACTGCGTTTATCCCTCGCTATCGTGCAGTTTGTGGCTTCTTCATTGCCGACGCGGATGGAGATGGATTCATCAATGAGCAAGAACTGGAGAAGGTGGTGGATTATGCTATAAAATGTAAATATAACATAATTTAGTTATCCTTTCCATCATGCTCCAGGAAGTTTGATTTCCTTTGTGAGATGTTAACAAATAATGTAGAAGGTGATGTGTTCAAGGTGATAGAATTTGCAATAAATACAAATTATATGGTGCATGCATGCATGATAGCAATTTTCTAAATATATCGTCAAAATGAGTATAACTCAGCAGTAATTGATACATACCTTCACTTAGAGGTAAGAGGATTGAATCACTCATCTCCAAATGTTGTTCAACTTAAAAAAAAAAAAAAAAAAATCTTTACAAGGTAATAAAATAAAGGGATAACTACATATATAGGTCAATTTTATTGACCCAATCTCACTATTGTCCATTTTCACAATAATTTTCATAAATGTCCAATAAAAATTAGTTGGAATCCTAAATCTAGTTGCATTTTACTGTTATGCCCATAACTAAATATGTAGACACCGTATTTGGTCCGACTTGATTTTTAGTAATAATGTTTGAAGTTTTTCAATATTTGGTAGTCAATTTGCTTTTTGGTATGCCACCAAGAGCTTAACTCAACTGGCATAAAGGTGTACTGATAGCCACAAGATCTGTAGTTCGAATCCCCCTCCTCACATATTATCAAATTTTTTTTTTTTAGTTTTCATGGTTTATTTTCATTTTCATTTTCATTTTATTTTTTTGTTTTTATTTAATTTATTTCTTTATTTATTTATTTTATTTATTTATTTATATTATTTTATTTTTTTTATTTTTTTTATTTTTTTTTATTTTTTGGTCTTCCCCCATTCCTTTCCCTCTCCCATTTCTTCTCCAACTCCCCACCTCTCCCCTATTCTTTCACCATTCTTTCCACCATTTTCTCATCCATCTTCCTCCCCAAATTAGTAACCCTTCAAGTATAGGGGGGGGGGGACGGAGGATGAGGAACAACAACAAAGAGAAGAAGTTGGAGTAAAAAGTAAGCTTGAAAGAGTGAAGGCATTTGAGCAAGAGCTTAGTTTAGAGAGTTTTTAGAAGAATTTCTTTTGAGAGAGAAAGGAGAAGAAGAAGATTTGAGCATACGCTTAGTTGAGAGAGTTTTTTTTTTTAGGAAGTGAGCTTAGCTTAGAGAGTGATAGAAAAAGAGAGAAAAGAAAGTGGAAGAGGAAAAGAGGAAAAGAGAGGGGGAGGAAGGAGTATACGGGGAGAGAGAAAAACATTAGGTAAGAAAGAAGGAAAAAAGAAGAAAGAGAAAAGTAAAAAAGGTGGTTTTTTTTTTTTTACTATTAATATTAATATTAATATTAATATTATTAATATTATTATTATTATTATTATTATCATTATCATTATTAATTTCTCTCTCATTTAGTTCACTTTTGTACTTTGCCAACTTCTTTTTTTTTTTGAAAAAAAAAACTTTCTAATTTATTTGTTTTTTTTTTCTCCTTTCATTCTCCAATTTGCTTTAATCCAATCTTTAATTCTTCTTGGTCAATTTCAATTATTGTTATTATAATTGTTTTGAAATTAATTTTCTATTAAAAGGGATTATGGGAACTGAGTAATGTGCCTTCGTGGAGTTCAACTCTCGTGCAGGCGTATGAAAATTCTCATTTTCCCTTTAAAAAGAATTTACTCTTTGAATAATTTTCTTCTTTTACATCTATTTTTTTTTTAATTTTTTTAAATTTTATTTTTAATAAACATAATCATGTATCGCCCATGTTTCCTTTAATTAAAAGGGAAATTAGGCATGATTTATATTAAATTGGATATCCAACTCACAATATTTAATCCTTACTTTATTTCTAAAGCTAAGGTAAAAACGAATGAGACATCTTGTGTTTATTATTGCATTTTGGGTTTTTATTTTCATATTTATCATTTTTTTAAGAAAAATAAAAATGAAGAACTGTTTTTATTCATTTAATTGGACAATTTAAGATACTGTGGTAATCGTTTTTTTAAACGGGTGTTGTAGGGTGCTAATACCTTCCTACACTCAAACGACTCCCGAACCTAATCTCTGGTTTTCTAAGACTGGTTTTAATTTTATTTTATAGGTGACCAATCACACCTTCAATGATTGGTGGCGACTCCAATTTTCTTTTTAAAAAAACCCAAAAGAGGATGTCGGCCGCTCCGCATCGCGATGACGTTGCGACAGCTTAGCGACTCCACTGGAGATTTTTTAGGGTCGAGCCATTGATATCTTTATTGTCCTTTAATTGAATTTTCCTTTAGGTCCCTTCGTTATTATTTTTGTTATTTTATTTATTTATTTTTTTTCCCTTACTTTATAATATGATTTGTTTGGCATATTGTTATTCACTTGTCTATTACCATCTTGTTATGTTGTAATTGTACTTTATCTTAGTTATGTCATTCATTTGCATGTCATCTTATTATTACCATCTTTTTATGTTGTAATTGTACTTTATCTTAGTTATGCCATTCATTTGCATGTCATCTTATTATTACCATCTTTTTATGTTGTAATTGTACTTTATCTTAGTTATGTCATTCATTTGCATGTCATCTTATTAATCATGCATTTCACACACTTTCACTAGCCTCCTACCCGGGCTCTACCTTAGGACTAGACTCGGAGACTGAGTAGTGTGACCTTCGTGGAATTTCGATTTCCGTGCAGGCGCATGGAATTCTCCACTCAAGCCTACTACATCGTTAAATCGGTGGGTAAGCTTGGGGACCTTTTCTAGGATGCCTCAGAGTTAAACTCCACTCATATAGTTCTTGGATTTGACTTATTACATGCATTATTGCCAAAGTTTATTTATTTATTTATTTATTTTTCTTCTTTCCCTTGTATCTTATATCAATTTTCAATTTTCGCTCATTGAAAATATCCTTTAAAATCTCTTTTAATGTAGTTAAGAATATTGTGCAAATTAAATTAACAGAATTTTCGATTATTTACATTGGCAGAAACTAAAGTATGAGTAAAATAAAATCACCCCCTCCAATACAAGAAATGGGTATAGAAGATCAAACAACAGTACGTCAATGGTCAGAAAATGTACAACAAATCCACGGAGATTCATTAGTAGAAAATGTTATTTCTCAATTTAAGGATGTCAGTTTTCCAGAAAGTCAATTAGAAACAGTGAGACAGGTTGGGAAAAATTAACTGTAGATAGAAAGGCTAAATTTACAAGCAAATATGACCATCTAGCTCAGCTCATGTATGTACGAGTTAATTATTTTATATTAAAAGCTTTGGTTCAACATTGGGATCCAACCTACAGATGTTTCACATTTGGCTCAATCGACATGACTCCTACAATAGAGGAATATCAGTCCCTTCTGCATATGCCAGCACAAATAGAGGTTGAAACTTATTCCTACGATAAAGAGCTTACAATGAAAAGAGCATTATCTACTCTTCTGGACAAGATTCGTACAAGCGACATTGAGAAACAAGTAAAGATAAAGGGAGAGAACACATGCCTACCCCTGGACTACATCCTTACTCTTCAACAAAAATTTGCAAACGAAGACAAGGAATTAACTTTACTGGCGTTGTGTATCTTTAATGTTGTTTTGTTTCCTAAAGTGTGTGGATATGTTGAGGAACGCGTGGTCAAGTTGTTTGCTAAGATAGAAATAGGAGTTGATCCCATTATTCCTGTATTGGCAGAAACTTTTCGTTCATTAAATTATTGCAGAACAAAAGGAATAGGAAGATTTATAGGGTGTGCACCATTATTGTACATTTGGGTCCTTAGTCACGTGAAGTGTCCACCAGAATTCAAATGTCCAGAGATCAAATTTTCAAGTTCTTGGAATAAGCTGCAAAATCCCATTTCAGAGTTCGTGCAATCAGGTTGGAGTTCATCCTCCCCTGAAAGGAGCGCTTGGGAAGTCTTTTTCTCCGAACTAAAGGTAGAAGATGTAATATGGAGAGCCCCTTGGATGTCAACAAGGCCAATGATCTATAAATGTGGTAAATTTCAAAGTTTACCTCTTTTGGGTCCTTGGGGAGGTATAACCTATGCTCCTTTATTGGTAGTACGCCAAATTTGGGTTAGACAATTAATCTCTGCTACGCATGAATTGAAGGATTTTGAATTTGCTTATGATAAAGGCTTCTGTAAAGATAGAATTCAGAAAATTGTGAAAGCATGGAAAATGATCACTAAAATCCAGAATGGTCAATTTCATGATGATACCACAGAGGCGTACAAAACATGGCATGCGAACAAAGCTAAAACCGTGCTTGTGTCACCAAAAATTAAAACCAAGATAAAACTTAATGCAAAGGTGATACCAGATCAACAGACAGAACAAGTAGCACGCGAAAAAGAATGTGATGAGTTGAGAAAAGCAAATTCATCACTGGTTCAAGAAAATGAAAGGCTACAATTAGAGGTAAAGCAAGGTTTGTTGCGCAATGTTGAACTAGAAAAAGAGTTGAACCGATTAAAGGGTAGTGTCAGCAAACAAGAACAGTTAGAAAAAGAAATTTCAGCGTTAGACCCAGTGGCCCGTGACTTGAACAAAAGAATGCATCGATTGAGAAGAGATAATGAAGTCTCCCAAACTACTCTCAAGTCAAAGATTAGGAAAGTCACTCGAAGGGCAGATGAACTAGCAGAATGTGCGCGTACTCTCTCTAAAGTCATAGCACCTACACAGTCGAATAGCAAGAATGAGCTCAAGTTTCTGGGAAAGCTTCGTATAAGTTTAGAGTATTGGGGGCAATTTTATTAACTTTTTACTTTAGTTTATGTTTTTTTAAGATAGTTGAAATATCTTGTAATTCAATTTTGCACAAATTTTGCTACTACATTGTTTTATCATTTTCCAATTTCATATCAAGGCCTTTTTTTTTTTTTCTTTCCTCTTCGATTTTTTAATGTTTCGTTTTGTCTTTCTCTTTTCTTGCACTAAAATCTATTTTCATTAAAAATATAAACAGAGTCATAAGATAGCTCAGTCACCTCAAATCCACCGCACCTACGTCACAAGATACAGGACAAGGATCATGGAAGAGAAAAGTACTGAAATGGAGAAAACAAGGAAAAATATTGAGGAGTTACGAGAAAAAATGGATGCCATTCTTGTCGCCTTGGAAAAAGACAAAATAATAGCTGATATTGCTCAGTCCAGCAATACAATGAATGACCCTCCAATCCGACAATCGACAGAGGGTACTACTCCAAAATATCATCCATTGTACAATATTCCAGTAGAGCAGCACCCATTTCCATTTTTCAAGAATGAGCAAGTGCCTGTACACAATCAACTTGGATTTTCACTGCCCACAGAGGTACCTCCCAAGGTGACCATTACAGTTCCCAATTTAGATGATCCTGAAATCAGAAAAGAGCTAACGGGAGGTGAGAAAGCCTCTTCTAGTGAAAAGCTTGAAGTCATGGAGGAAAGATTAAGGGCAGTAGAAGGAACAGACGTCTTCGGAAATATAGATGCGACCAAGCTATGCTTGGTACCAGATGTAATCCTCCCTCCAAAATTAAAGGTGCCCGAGTTTGAAAAGTATGATGGAGCATCCTGTCCTAAAAACCATCTCATCATGTATTGCAGGAAGATGGCAGCATACGTCCAAAATGACAAGCTGTTAATTCACTGCTTCCAAGACAGTCTTATTGGTCCAGCATCTCGATGGTATATGCAATTAGACAGCACTCATATCTGTTCATAG
mRNA sequence
ATGCTATATCTAGCTCTCCATTTGAGAACCCTCCCATGCCTCAACTTTTCTTCTCAATTAAACACTACTGCGAAGGCTGCAAAATCGTGTCGGTTTCGTGTGTTTGAGGGAGATCAAATGTCTTGTAAATACGACAAGAACTCGAGCTTCAAGTTGCAAAGAGAGGAGATGAAAGCAATCTTTAGGGAGCATGACTTCAACGGCGATGGCCACTTGAGCATCCAAGAATTGTCGAGGGCGTTCGGGACGCTCACTGCGTTTATCCCTCGCTATCGTGCAGTTTGTGGCTTCTTCATTGCCGACGCGGATGGAGATGGATTCATCAATGAGCAAGAACTGGAGAAGGTGGTGGATTATGCTATAAAATGTTGGAGTTCATCCTCCCCTGAAAGGAGCGCTTGGGAAGTCTTTTTCTCCGAACTAAAGGTAGAAGATGTAATATGGAGAGCCCCTTGGATGTCAACAAGGCCAATGATCTATAAATGTGGTAAATTTCAAAGTTTACCTCTTTTGGGTCCTTGGGGAGGTATAACCTATGCTCCTTTATTGGTAGTACGCCAAATTTGGGTTAGACAATTAATCTCTGCTACGCATGAATTGAAGGATTTTGAATTTGCTTATGATAAAGGCTTCTGTAAAGATAGAATTCAGAAAATTGTGAAAGCATGGAAAATGATCACTAAAATCCAGAATGGTCAATTTCATGATGATACCACAGAGGCGTACAAAACATGGCATGCGAACAAAGCTAAAACCGTGCTTGTGTCACCAAAAATTAAAACCAAGATAAAACTTAATGCAAAGGTGATACCAGATCAACAGACAGAACAAGTAGCACGCGAAAAAGAATGTGATGAGTTGAGAAAAGCAAATTCATCACTGGTTCAAGAAAATGAAAGGCTACAATTAGAGGTAAAGCAAGGTTTGTTGCGCAATGTTGAACTAGAAAAAGAGTTGAACCGATTAAAGGGTAGTGTCAGCAAACAAGAACAGTTAGAAAAAGAAATTTCAGCGTTAGACCCAGTGGCCCGTGACTTGAACAAAAGAATGCATCGATTGAGAAGAGATAATGAAGTCTCCCAAACTACTCTCAAGTCAAAGATTAGGAAAGTCACTCGAAGGGCAGATGAACTAGCAGAATGTGCGCGTACTCTCTCTAAAGTCATAGCACCTACACAGTCGAATAGCAAGAATGAGCTCAAGTTTCTGGGAAAGCTTCGTATAAGTTTAGAGACAAGGATCATGGAAGAGAAAAGTACTGAAATGGAGAAAACAAGGAAAAATATTGAGGAGTTACGAGAAAAAATGGATGCCATTCTTGTCGCCTTGGAAAAAGACAAAATAATAGCTGATATTGCTCAGTCCAGCAATACAATGAATGACCCTCCAATCCGACAATCGACAGAGGGTACTACTCCAAAATATCATCCATTGTACAATATTCCAGTAGAGCAGCACCCATTTCCATTTTTCAAGAATGAGCAAGTGCCTGTACACAATCAACTTGGATTTTCACTGCCCACAGAGGTACCTCCCAAGGTGACCATTACAGTTCCCAATTTAGATGATCCTGAAATCAGAAAAGAGCTAACGGGAGGTGAGAAAGCCTCTTCTAGTGAAAAGCTTGAAGTCATGGAGGAAAGATTAAGGGCAGTAGAAGGAACAGACGTCTTCGGAAATATAGATGCGACCAAGCTATGCTTGGTACCAGATGTAATCCTCCCTCCAAAATTAAAGGTGCCCGAGTTTGAAAAGTATGATGGAGCATCCTGTCCTAAAAACCATCTCATCATGTATTGCAGGAAGATGGCAGCATACGTCCAAAATGACAAGCTGTTAATTCACTGCTTCCAAGACAGTCTTATTGGTCCAGCATCTCGATGGTATATGCAATTAGACAGCACTCATATCTGTTCATAG
Coding sequence (CDS)
ATGCTATATCTAGCTCTCCATTTGAGAACCCTCCCATGCCTCAACTTTTCTTCTCAATTAAACACTACTGCGAAGGCTGCAAAATCGTGTCGGTTTCGTGTGTTTGAGGGAGATCAAATGTCTTGTAAATACGACAAGAACTCGAGCTTCAAGTTGCAAAGAGAGGAGATGAAAGCAATCTTTAGGGAGCATGACTTCAACGGCGATGGCCACTTGAGCATCCAAGAATTGTCGAGGGCGTTCGGGACGCTCACTGCGTTTATCCCTCGCTATCGTGCAGTTTGTGGCTTCTTCATTGCCGACGCGGATGGAGATGGATTCATCAATGAGCAAGAACTGGAGAAGGTGGTGGATTATGCTATAAAATGTTGGAGTTCATCCTCCCCTGAAAGGAGCGCTTGGGAAGTCTTTTTCTCCGAACTAAAGGTAGAAGATGTAATATGGAGAGCCCCTTGGATGTCAACAAGGCCAATGATCTATAAATGTGGTAAATTTCAAAGTTTACCTCTTTTGGGTCCTTGGGGAGGTATAACCTATGCTCCTTTATTGGTAGTACGCCAAATTTGGGTTAGACAATTAATCTCTGCTACGCATGAATTGAAGGATTTTGAATTTGCTTATGATAAAGGCTTCTGTAAAGATAGAATTCAGAAAATTGTGAAAGCATGGAAAATGATCACTAAAATCCAGAATGGTCAATTTCATGATGATACCACAGAGGCGTACAAAACATGGCATGCGAACAAAGCTAAAACCGTGCTTGTGTCACCAAAAATTAAAACCAAGATAAAACTTAATGCAAAGGTGATACCAGATCAACAGACAGAACAAGTAGCACGCGAAAAAGAATGTGATGAGTTGAGAAAAGCAAATTCATCACTGGTTCAAGAAAATGAAAGGCTACAATTAGAGGTAAAGCAAGGTTTGTTGCGCAATGTTGAACTAGAAAAAGAGTTGAACCGATTAAAGGGTAGTGTCAGCAAACAAGAACAGTTAGAAAAAGAAATTTCAGCGTTAGACCCAGTGGCCCGTGACTTGAACAAAAGAATGCATCGATTGAGAAGAGATAATGAAGTCTCCCAAACTACTCTCAAGTCAAAGATTAGGAAAGTCACTCGAAGGGCAGATGAACTAGCAGAATGTGCGCGTACTCTCTCTAAAGTCATAGCACCTACACAGTCGAATAGCAAGAATGAGCTCAAGTTTCTGGGAAAGCTTCGTATAAGTTTAGAGACAAGGATCATGGAAGAGAAAAGTACTGAAATGGAGAAAACAAGGAAAAATATTGAGGAGTTACGAGAAAAAATGGATGCCATTCTTGTCGCCTTGGAAAAAGACAAAATAATAGCTGATATTGCTCAGTCCAGCAATACAATGAATGACCCTCCAATCCGACAATCGACAGAGGGTACTACTCCAAAATATCATCCATTGTACAATATTCCAGTAGAGCAGCACCCATTTCCATTTTTCAAGAATGAGCAAGTGCCTGTACACAATCAACTTGGATTTTCACTGCCCACAGAGGTACCTCCCAAGGTGACCATTACAGTTCCCAATTTAGATGATCCTGAAATCAGAAAAGAGCTAACGGGAGGTGAGAAAGCCTCTTCTAGTGAAAAGCTTGAAGTCATGGAGGAAAGATTAAGGGCAGTAGAAGGAACAGACGTCTTCGGAAATATAGATGCGACCAAGCTATGCTTGGTACCAGATGTAATCCTCCCTCCAAAATTAAAGGTGCCCGAGTTTGAAAAGTATGATGGAGCATCCTGTCCTAAAAACCATCTCATCATGTATTGCAGGAAGATGGCAGCATACGTCCAAAATGACAAGCTGTTAATTCACTGCTTCCAAGACAGTCTTATTGGTCCAGCATCTCGATGGTATATGCAATTAGACAGCACTCATATCTGTTCATAG
Protein sequence
MLYLALHLRTLPCLNFSSQLNTTAKAAKSCRFRVFEGDQMSCKYDKNSSFKLQREEMKAIFREHDFNGDGHLSIQELSRAFGTLTAFIPRYRAVCGFFIADADGDGFINEQELEKVVDYAIKCWSSSSPERSAWEVFFSELKVEDVIWRAPWMSTRPMIYKCGKFQSLPLLGPWGGITYAPLLVVRQIWVRQLISATHELKDFEFAYDKGFCKDRIQKIVKAWKMITKIQNGQFHDDTTEAYKTWHANKAKTVLVSPKIKTKIKLNAKVIPDQQTEQVAREKECDELRKANSSLVQENERLQLEVKQGLLRNVELEKELNRLKGSVSKQEQLEKEISALDPVARDLNKRMHRLRRDNEVSQTTLKSKIRKVTRRADELAECARTLSKVIAPTQSNSKNELKFLGKLRISLETRIMEEKSTEMEKTRKNIEELREKMDAILVALEKDKIIADIAQSSNTMNDPPIRQSTEGTTPKYHPLYNIPVEQHPFPFFKNEQVPVHNQLGFSLPTEVPPKVTITVPNLDDPEIRKELTGGEKASSSEKLEVMEERLRAVEGTDVFGNIDATKLCLVPDVILPPKLKVPEFEKYDGASCPKNHLIMYCRKMAAYVQNDKLLIHCFQDSLIGPASRWYMQLDSTHICS
Homology
BLAST of Lcy05g018960 vs. ExPASy TrEMBL
Match:
A0A5A7T1W2 (Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold86G00060 PE=4 SV=1)
HSP 1 Score: 288.5 bits (737), Expect = 6.8e-74
Identity = 197/587 (33.56%), Postives = 286/587 (48.72%), Query Frame = 0
Query: 116 VVDYAIKCWSSSSPERSAWEVFFSELKVEDVIWRAPWMSTRPMIYKCGKFQSLPLLGPWG 175
+ ++ + W + P + AW FF++L E+VIW+A WM + +IY+CG F S+PLLGPWG
Sbjct: 240 ISEFGMAVWDPTYPRKEAWLSFFAKLTSENVIWKAQWMPLKAVIYRCGDFHSVPLLGPWG 299
Query: 176 GITYAPLLVVRQIWVRQLISATHELKDFEFAYDKGFCKDRIQKIVKAWKMITKIQNGQFH 235
G+ Y PLLV+RQ+W++Q I TH LK DKG +
Sbjct: 300 GVNYTPLLVLRQVWLKQFIPPTHNLK----IKDKG-----------------------HY 359
Query: 236 DDTTEAYKTWHANKAKTVL-VSPKIKTKIKLNAKVIPDQQTEQVAREKECDELRKANSSL 295
+ T Y+ W AN+ K ++ +S ++ + K + P+Q E+ EL + N L
Sbjct: 360 EGVTSGYEAWQANRRKNIIDISREVVERGKETSFEQPNQWIEKSI------ELEQKNRLL 419
Query: 296 VQENERLQLEVKQGLLRNVELEKELNRLKGSVSKQEQLEKEISALDPVARDLNKRMHRLR 355
QENE+L+ E Q + L+ EL + K + Q++LE ++ LD R +NK ++
Sbjct: 420 EQENEKLRKETSQWMDHATYLQNELEKTKSFLKNQDKLETDLETLDKEMRRMNKANRSMK 479
Query: 356 RDNEVSQTTLKSKIRKVTRRADE---LAECARTLSKVIAPTQSNSK-------------- 415
+ Q T+ + K+ R++E L A L + Q++SK
Sbjct: 480 NEKTTLQATVGLHL-KMAERSEEYKILKNYADFLHYQLTALQNSSKRITQEYESLNTDYV 539
Query: 416 ---------------------NELKFL--------------GK------LRISLETR--- 475
++FL GK +R TR
Sbjct: 540 QMKVDYDLHTRDFQVLVERVDQTIEFLRMVSKRANGFAEWAGKYSSFTPIRHPYNTRYKS 599
Query: 476 -IMEEKSTEMEKTRKNIEELREKMDAI--LVALEKDKIIADIAQSSNTMNDPPIRQSTEG 535
IMEEK +M+K R+ I L E++ I L+++ K K D QSSN + D G
Sbjct: 600 QIMEEKDKDMDKMRQEINNLGEQVSKILELLSMGKGKAAVDTTQSSNPIQDTDDPIYPPG 659
Query: 536 TTPKYHPLYNIPVEQHPFPFFKNEQVPVHNQLGFSLPTEVPPKVTITVPNLDDPEIRKEL 595
TP YH ++ P ++
Sbjct: 660 FTP-YH--------------------------------------------INVPRLKPLN 719
Query: 596 TGGEKASSSEKLEVMEERLRAVEGTDVFGNIDATKLCLVPDVILPPKLKVPEFEKYDGAS 638
T + S +KL+V+EERLRA+E TDV+GNIDAT+LCLVP +I+P K KVPEF KYDG++
Sbjct: 720 TMFLRIRSKQKLDVLEERLRAIEETDVYGNIDATQLCLVPGLIIPAKFKVPEFNKYDGST 747
BLAST of Lcy05g018960 vs. ExPASy TrEMBL
Match:
A0A061E8N3 (Retrotrans_gag domain-containing protein OS=Theobroma cacao OX=3641 GN=TCM_010930 PE=4 SV=1)
HSP 1 Score: 268.1 bits (684), Expect = 9.6e-68
Identity = 173/544 (31.80%), Postives = 278/544 (51.10%), Query Frame = 0
Query: 131 RSAWEVFFSELKVEDVIWRAPWMSTRPMIYKCGKFQSLPLLGPWGGITYAPLLVVRQIWV 190
+ W L +V WRAPWM ++YKCG +PL+GPWG I+YAP++V RQ
Sbjct: 114 KEEWVARLRRLMSIEVTWRAPWMPRMQVMYKCGDKPWVPLMGPWGAISYAPIMVRRQFGS 173
Query: 191 RQLISATHELKDFEFAYDKGFCKDRIQKIVKAWKMITKIQNGQFHDDTTEAYKTWHANKA 250
Q + TH+L EF Y + RI++I + WK ++ G+ D+ T Y TWH +
Sbjct: 174 EQFVPMTHQLDQLEFTYGEPETLKRIEEIAQDWKKTCRVDQGRVTDEVTTGYHTWHDQRV 233
Query: 251 KTVLVSPKIKTKIKLNAK---VIPDQQTEQVAREKECDELRKANSSLVQE-NERLQLEVK 310
K V+ PK +K +N + V+ + + + EKE +++ + ++E + +V+
Sbjct: 234 KNVIHPPKNPSKHPVNPEPQDVLLESELTRKRLEKEMMNMKRRHEDELEEVKKETARKVR 293
Query: 311 QGLLRNVELEKELNRL----KGSVSKQEQLEKEISALDPVARDLNKRMHRLRRDNEVSQT 370
L E + + + +++ ++L+ +AL R + + L+ D ++ +T
Sbjct: 294 VALKERDEWQSKFEEVSVANSSLLARIQELQSANNALQHEVRRQGQTIQELKNDCDMLET 353
Query: 371 TLK-------------SKIRKVTRRADELAECARTLSKVIAPTQSNSK-NELKFLGKLRI 430
++ ++R+ DEL+E K++ +K E + L +
Sbjct: 354 AMEGHKAQARVMADKTEELRREILPKDELSERLINHLKMVRDQYDKNKIPEKQILHRYNT 413
Query: 431 SLETRIM-EEKSTEMEKTRKNIEELREKMDAILVALEKDKIIADIAQSSNTMNDPPIRQS 490
++IM +E S M+K K EE+ ++ IL + DK SS T D ++Q+
Sbjct: 414 RARSKIMGDEHSERMDKIEKKQEEIMGQLSKILELISTDK-GKKATGSSGTPED--VQQT 473
Query: 491 TEGTTPKYHPLYNIPVEQH---------PFPFFKNEQVPVHNQLGFSLPTEVPPKVTITV 550
T P Y P + P ++ +PFF+ P P I+V
Sbjct: 474 ETNTDPVYPPGFTPPPARNVSIPMPSVGQYPFFRMPIGPPPTYAQQRPIGGASPSDPISV 533
Query: 551 PNLDDPEIRKELTGG-----EKASSSEKLEVMEERLRAVEGTDVFGNIDATKLCLVPDVI 610
P+LDDP+ +++L G + + +K ++ EERLR VEG ++ ++DA +LCLVPDV+
Sbjct: 534 PDLDDPKEQEKLKCGSVESKDNPDTHKKFDLFEERLRMVEGMGMYCSMDAIELCLVPDVV 593
Query: 611 LPPKLKVPEFEKYDGASCPKNHLIMYCRKMAAYVQNDKLLIHCFQDSLIGPASRWYMQLD 638
+PPK KVP+FEKYDG CP H+ MYCR+MAAY +DKLLIHCFQDSL G A++WY+QLD
Sbjct: 594 IPPKFKVPDFEKYDGTKCPVTHITMYCRRMAAYAHDDKLLIHCFQDSLTGAAAKWYVQLD 653
BLAST of Lcy05g018960 vs. ExPASy TrEMBL
Match:
A0A061EFF5 (Gag-pro-like protein OS=Theobroma cacao OX=3641 GN=TCM_010953 PE=4 SV=1)
HSP 1 Score: 264.6 bits (675), Expect = 1.1e-66
Identity = 186/539 (34.51%), Postives = 277/539 (51.39%), Query Frame = 0
Query: 145 DVIWRAPWMSTRPMIYKCGKFQSLPLLGPWGGITYAPLLVVRQIWVRQLISATHELKDFE 204
+V WRAPWM P++YKCG +PL+GPWG I+YAP++V RQ Q + TH L E
Sbjct: 4 EVTWRAPWMPHHPVLYKCGNEPWVPLMGPWGAISYAPIMVRRQFGSEQFVPMTHRLNSLE 63
Query: 205 FAY-DKGFCKDRIQKIVKAWKMITKIQNGQFHDDTTEAYKTWHANKAKTVLVSPKIKTKI 264
FAY + GF K RI++I +AWK +++ G++ D+ T Y+ H + K V V PK +
Sbjct: 64 FAYGEPGFLK-RIEEITQAWKKTSRVDQGRYTDEVTTGYQIRHDQRVKDV-VYPK---ED 123
Query: 265 KLNAKVIPDQQTEQVAREKECDELRKANSSLVQENERLQLEVKQGLLRNVELEKELNRLK 324
L V P+ + + E + N+S Q E LQ E ++ E K++ +++
Sbjct: 124 ALRGPVDPEPRDALLESELARKKSEAENASWKQRYEDLQKECEKMKREVSEQRKKVRKME 183
Query: 325 GSV--------SKQEQLEKEISALDPVARDLNKRMHRLRRDNEVSQ-------------- 384
G + +L++EI + +L LRR Q
Sbjct: 184 GKYESLNDKFSATTSELQREIQVRENRGNELQTHNDGLRRQVRFQQESIQLLRQEYEELE 243
Query: 385 ---TTLKSKIRKVTRRADELAECARTLSKVIAPTQSNSKNELKFLGKLRISLETRIMEEK 444
TT + + ++ +++ + E + + + N++ +L ++ RIMEE+
Sbjct: 244 GVMTTYQQEYERLKQQSTRIQEWGESYRQ----AYTEKYNQMDYL-VWQMRERARIMEEE 303
Query: 445 STE-MEKTRKNIEELRE---KMDAILVALEKDKIIADIAQSSNTMNDPPIRQSTEGTTPK 504
E M++ + EE+RE KM ++++L K K I + + + N P + P
Sbjct: 304 QRERMDRMERAQEEMREQLAKMMELMMSLSKGK--RAIEEPTPSENPPAQDSGNQMDDPS 363
Query: 505 YHPLYNIPVEQ-----HPF---PFFKNEQVPVHNQL---GFSLPTEVPPKVTITVPNLDD 564
Y P + P Q HP P + N P+ +Q F + P I VP LDD
Sbjct: 364 YPPRFTPPHAQTSQRVHPQVIPPVYYNAPTPLGHQPTHGQFGPYPGINPAEPIHVPYLDD 423
Query: 565 PEIRKEL-----TGGEKASSSEKLEVMEERLRAVEGTDVFGNIDATKLCLVPDVILPPKL 624
P+ +++L GE +K +++EERLRA+EG D FG +DAT+LCLVPDV++P K
Sbjct: 424 PKEQEKLRKDSSQTGENEKDQKKYDLLEERLRAIEGVDRFGTMDATELCLVPDVLIPAKF 483
Query: 625 KVPEFEKYDGASCPKNHLIMYCRKMAAYVQNDKLLIHCFQDSLIGPASRWYMQLDSTHI 638
KVPEFEKYDG CP H+ MYCRKMAA +DKLLIH FQDSL G A+RWY+QLD I
Sbjct: 484 KVPEFEKYDGTKCPMAHITMYCRKMAAQSHDDKLLIHFFQDSLTGSAARWYVQLDRNRI 530
BLAST of Lcy05g018960 vs. ExPASy TrEMBL
Match:
A0A061EXR3 (G-patch domain-containing protein OS=Theobroma cacao OX=3641 GN=TCM_024883 PE=4 SV=1)
HSP 1 Score: 255.0 bits (650), Expect = 8.4e-64
Identity = 195/588 (33.16%), Postives = 286/588 (48.64%), Query Frame = 0
Query: 131 RSAWEVFFSELKVEDVIWRAPWMSTRPMIYKCGKFQSLPLLGPWGGITYAPLLVVRQIWV 190
+ W EL +V WRAPWM P++YKCG + L+GPWG I+YAP++V RQ
Sbjct: 269 KEQWISRLRELMSVEVTWRAPWMPHHPVLYKCGNEPWVQLMGPWGAISYAPIMVRRQFGS 328
Query: 191 RQLISATHELKDFEFAYDK-GFCKDRIQKIVKAWKMITKIQNGQFHDDTTEAYKTWHANK 250
Q + TH L EFAY++ GF K RI++I +AWK +++ G++ D+ T Y+ WH +
Sbjct: 329 EQFVPMTHRLNTLEFAYEEPGFLK-RIEEIAQAWKKTSRVDQGRYTDEVTIGYQIWHDQR 388
Query: 251 AKTVL----------VSPKIKTKIKLNAKVIPDQQTEQVA-------REKECDELRK--- 310
K V+ V P+ + + + + E + +KEC+++++
Sbjct: 389 VKDVVYPKEDVLRGPVDPEPRDALLESELARKKSEAENASWKQRYEDLQKECEKMKREVS 448
Query: 311 ---------------ANSSLVQENERLQLEVKQGLLRNVELEKELNRLKGSVSKQEQ--- 370
N LQ E++ R EL+ + L+ V Q++
Sbjct: 449 EQRKKVRKMEGKYESLNDKFSTTTSELQREIQVRENRGNELQTHNDGLRRQVRFQQESIQ 508
Query: 371 -LEKEISALDPVARDLNKRMHRLRRDNEVSQTTLKS-----------------KIRKVTR 430
L +E L+ V + RL++ + Q +S ++R+V
Sbjct: 509 LLRQEYEELEGVMTTYQQEYERLKQQSTRIQEWGESYRQAYTEKYDQMDYLVWQMREVAY 568
Query: 431 RADELAECARTLSKVIAPTQSNSKNELKFLGKLRISLETRIMEEKSTE-MEKTRKNIEEL 490
+A +A L I P + +K+L + RIMEE+ E M++ + EE+
Sbjct: 569 KARSMAWKTDILRSQIFPVGKQEQQLIKYLDE-----RARIMEEEQRERMDRMERAQEEM 628
Query: 491 RE---KMDAILVALEKDK-IIADIAQSSNTMNDPPIRQS-TEGTTPKYHPLYNIPVEQ-- 550
RE KM ++++L K K I + A S N PP + S + P Y P + P Q
Sbjct: 629 REQLAKMMKLMMSLSKGKRAIEEPAPSEN----PPAQDSGNQREDPPYPPGFTPPHAQTS 688
Query: 551 ---HPF---PFFKNE-----QVPVHNQLGFSLPTEVPPKVTITVPNLDDPEIRKELTGG- 610
HP + N P H Q G L V P I VP+LDDP+ +++L
Sbjct: 689 QRVHPQVMPSVYYNAPPPMGHQPTHGQFGPYL--GVNPIEPIHVPDLDDPKEQEKLRKDS 748
Query: 611 ----EKASSSEKLEVMEERLRAVEGTDVFGNIDATKLCLVPDVILPPKLKVPEFEKYDGA 638
E +K +++EERLRA+EG D FG +DAT+LCLVPDV++P K KVPEFEKYD
Sbjct: 749 SQTRENEKDQKKYDLLEERLRAIEGVDRFGTMDATELCLVPDVLIPAKFKVPEFEKYDET 808
BLAST of Lcy05g018960 vs. ExPASy TrEMBL
Match:
A0A061E378 (G-patch domain-containing protein OS=Theobroma cacao OX=3641 GN=TCM_008095 PE=4 SV=1)
HSP 1 Score: 253.8 bits (647), Expect = 1.9e-63
Identity = 192/617 (31.12%), Postives = 295/617 (47.81%), Query Frame = 0
Query: 131 RSAWEVFFSELKVEDVIWRAPWMSTRPMIYKCGKFQSLPLLGPWGGITYAPLLVVRQIWV 190
+ W F EL +V WRAPWM P++YKCG +PL+GPWG I+YAP++V RQ
Sbjct: 295 KEQWISRFRELMSVEVTWRAPWMPHHPVLYKCGNEPWVPLMGPWGVISYAPIMVRRQFGS 354
Query: 191 RQLISATHELKDFEFAYDKGFCKDRIQKIVKAWKMITKIQNGQFHDDTTEAYKTWHANKA 250
Q + TH L EFAY + +I++I +AWK +++ G++ D+ T Y+ WH +
Sbjct: 355 EQFVPMTHRLNTLEFAYGEPSFLKKIEEIAQAWKKTSRVDQGRYTDEVTTGYQIWHDQRV 414
Query: 251 KTVL----------VSPKIKTKIKLNAKVIPDQQTEQVA-------REKECDELRK---- 310
K V+ V P+ + + + + E + +KEC+++++
Sbjct: 415 KDVVYPKEDALRGPVDPEPRDALLESELARKKSEAENASWKQRYEDLQKECEKMKREVSE 474
Query: 311 --------------ANSSLVQENERLQLEVKQGLLRNVELEKELNRLKGSVSKQEQ---- 370
N LQ E++ + EL+ + L+ V Q++
Sbjct: 475 QRKKVQKMEGKYESLNDKFSATTSELQREIQVRENQGNELQTHNDGLRRQVRFQQESIQL 534
Query: 371 LEKEISALDPVARDLNKRMHRLRRDNEVSQTTLKS-----------------KIRKVTRR 430
L +E L+ V + RL++ + Q +S ++R+V +
Sbjct: 535 LRQEYEELERVMTTYQQEYERLKQQSTRIQEWGESYRQAYTEKYNQMDYLVWQMREVAYK 594
Query: 431 ADELAECARTLSKVIAPTQSNSKNELKFLGK------------LRISLE----------- 490
A +A L I P + +K+L + + IS +
Sbjct: 595 ARSMAWKTDILRSQIFPVGKQEQQLIKYLDEHIIIHTCINHHFMAISSKIARPPKPSDER 654
Query: 491 -------TRIMEEKSTE-MEKTRKNIEELRE---KMDAILVALEKDK-IIADIAQSSNTM 550
RIME++ E M++ + EE+RE KM ++++L K K I + AQS N
Sbjct: 655 VHNTRQRARIMEQEQRERMDRMERAQEEMREQLAKMMELMMSLSKGKRAIEEPAQSEN-- 714
Query: 551 NDPPIRQS-TEGTTPKYHPLYNIPVEQ-----HPF---PFFKNE-----QVPVHNQLGFS 610
PP + S + P Y P + P Q HP P + N P+H Q F
Sbjct: 715 --PPAQDSGNQREDPPYPPGFTPPHAQTSQRVHPQVIPPVYYNAPPPLGHQPIHGQ--FG 774
Query: 611 LPTEVPPKVTITVPNLDDPEIRKELTG-----GEKASSSEKLEVMEERLRAVEGTDVFGN 638
+ + P +I +P+LDDP+ +++L G+ +K +++EERLRA+EG D FG
Sbjct: 775 PYSGINPAESINIPDLDDPKEQEKLRNDSSQTGKNEKDQKKYDLLEERLRAIEGVDRFGT 834
BLAST of Lcy05g018960 vs. NCBI nr
Match:
KAA0036933.1 (uncharacterized protein E6C27_scaffold86G00060 [Cucumis melo var. makuwa])
HSP 1 Score: 288.5 bits (737), Expect = 1.4e-73
Identity = 197/587 (33.56%), Postives = 286/587 (48.72%), Query Frame = 0
Query: 116 VVDYAIKCWSSSSPERSAWEVFFSELKVEDVIWRAPWMSTRPMIYKCGKFQSLPLLGPWG 175
+ ++ + W + P + AW FF++L E+VIW+A WM + +IY+CG F S+PLLGPWG
Sbjct: 240 ISEFGMAVWDPTYPRKEAWLSFFAKLTSENVIWKAQWMPLKAVIYRCGDFHSVPLLGPWG 299
Query: 176 GITYAPLLVVRQIWVRQLISATHELKDFEFAYDKGFCKDRIQKIVKAWKMITKIQNGQFH 235
G+ Y PLLV+RQ+W++Q I TH LK DKG +
Sbjct: 300 GVNYTPLLVLRQVWLKQFIPPTHNLK----IKDKG-----------------------HY 359
Query: 236 DDTTEAYKTWHANKAKTVL-VSPKIKTKIKLNAKVIPDQQTEQVAREKECDELRKANSSL 295
+ T Y+ W AN+ K ++ +S ++ + K + P+Q E+ EL + N L
Sbjct: 360 EGVTSGYEAWQANRRKNIIDISREVVERGKETSFEQPNQWIEKSI------ELEQKNRLL 419
Query: 296 VQENERLQLEVKQGLLRNVELEKELNRLKGSVSKQEQLEKEISALDPVARDLNKRMHRLR 355
QENE+L+ E Q + L+ EL + K + Q++LE ++ LD R +NK ++
Sbjct: 420 EQENEKLRKETSQWMDHATYLQNELEKTKSFLKNQDKLETDLETLDKEMRRMNKANRSMK 479
Query: 356 RDNEVSQTTLKSKIRKVTRRADE---LAECARTLSKVIAPTQSNSK-------------- 415
+ Q T+ + K+ R++E L A L + Q++SK
Sbjct: 480 NEKTTLQATVGLHL-KMAERSEEYKILKNYADFLHYQLTALQNSSKRITQEYESLNTDYV 539
Query: 416 ---------------------NELKFL--------------GK------LRISLETR--- 475
++FL GK +R TR
Sbjct: 540 QMKVDYDLHTRDFQVLVERVDQTIEFLRMVSKRANGFAEWAGKYSSFTPIRHPYNTRYKS 599
Query: 476 -IMEEKSTEMEKTRKNIEELREKMDAI--LVALEKDKIIADIAQSSNTMNDPPIRQSTEG 535
IMEEK +M+K R+ I L E++ I L+++ K K D QSSN + D G
Sbjct: 600 QIMEEKDKDMDKMRQEINNLGEQVSKILELLSMGKGKAAVDTTQSSNPIQDTDDPIYPPG 659
Query: 536 TTPKYHPLYNIPVEQHPFPFFKNEQVPVHNQLGFSLPTEVPPKVTITVPNLDDPEIRKEL 595
TP YH ++ P ++
Sbjct: 660 FTP-YH--------------------------------------------INVPRLKPLN 719
Query: 596 TGGEKASSSEKLEVMEERLRAVEGTDVFGNIDATKLCLVPDVILPPKLKVPEFEKYDGAS 638
T + S +KL+V+EERLRA+E TDV+GNIDAT+LCLVP +I+P K KVPEF KYDG++
Sbjct: 720 TMFLRIRSKQKLDVLEERLRAIEETDVYGNIDATQLCLVPGLIIPAKFKVPEFNKYDGST 747
BLAST of Lcy05g018960 vs. NCBI nr
Match:
XP_031738551.1 (LOW QUALITY PROTEIN: uncharacterized protein LOC101203611 [Cucumis sativus])
HSP 1 Score: 276.2 bits (705), Expect = 7.3e-70
Identity = 184/567 (32.45%), Postives = 277/567 (48.85%), Query Frame = 0
Query: 164 KFQSLPLLGPWGGITYAPLLVVRQIWVRQLISATHELKDFEFAYDKGFCKDRIQKIVKAW 223
+F S+PLLGPWGG+ Y PLLV+RQ+W++Q I TH L+D +FAYD C+ + + V AW
Sbjct: 13 RFHSVPLLGPWGGVNYTPLLVLRQVWLKQFIPPTHNLQDSDFAYDHEDCQRKKHRAVCAW 72
Query: 224 KMITKIQNGQFHDDTTEAYKTWHANKAKTVLVS-PKIKTKIKLNAKVIPDQQTEQVAREK 283
K + KI++ ++ T Y+ W N+ K V+ + ++ +++ + PDQ E++ +
Sbjct: 73 KSVRKIKDKGHYEGVTSGYEAWQTNRRKNVIYTLREVVERVEEPSSEQPDQWVEKITK-- 132
Query: 284 ECDELRKANSSLVQENERLQLEVKQGLLRNVELEKELNRLKGSVSKQEQLEKEISALDPV 343
L + N L QENE+LQ E Q + L++EL + K + Q++LEK + LD
Sbjct: 133 ----LEEKNRLLEQENEKLQKETSQWIDHATFLQRELEKTKSFLKNQDKLEKNLEVLDEE 192
Query: 344 ARDLNKRMHRLRRDNEVSQTTLKSK---IRKVTRRADELAECARTLSKVIAPTQS----- 403
R +NK L+ + + Q T++S+ I+ + + E L I ++
Sbjct: 193 MRRMNKSNRSLKNEKTILQATVESQDEYIKDLENMKEYYLELVNDLKSSIGKREAQIVDL 252
Query: 404 -------------------NSKNELKFLGKLRISL----------ETRIMEE-------- 463
+ K L SL RI++E
Sbjct: 253 EVHNCSLRQTVDSLHVKMVEHSEDYKILKNYADSLHHQLTAFQNSSERIVQEYKLLKTDY 312
Query: 464 --KSTEMEKTRKNIEELREKMDAILVALE------------------------------- 523
+ + R++ + L E++D + L
Sbjct: 313 MQMKVDYDLQRRDFQTLVERVDQTIGFLRIVSRRANGFAEWAADLRINFFSIRPHSDDLN 372
Query: 524 --------------KDKIIADIAQSSNTMNDPPIRQSTEGTTPKYHPLYNIPVEQHPFPF 583
K K++ + AQSSN + D G TP++ QH
Sbjct: 373 RFLKMICRELGHFGKGKVVVETAQSSNPVQDTDDPIYPPGFTPRHMNATQSQTAQH---- 432
Query: 584 FKNEQVPVHNQLGFSLPTEVPPKVTITVPNLDDPEIRKELTGGEKASSSEKLEVMEERLR 638
N L F +P VP + L+ +++ E + +KL+V+EERLR
Sbjct: 433 -----YVAMNPL-FDVPPPVP-----DIEQLEAQAKIQDMGQNENTPAKQKLDVLEERLR 492
BLAST of Lcy05g018960 vs. NCBI nr
Match:
EOY01013.1 (Uncharacterized protein TCM_010930 [Theobroma cacao])
HSP 1 Score: 268.1 bits (684), Expect = 2.0e-67
Identity = 173/544 (31.80%), Postives = 278/544 (51.10%), Query Frame = 0
Query: 131 RSAWEVFFSELKVEDVIWRAPWMSTRPMIYKCGKFQSLPLLGPWGGITYAPLLVVRQIWV 190
+ W L +V WRAPWM ++YKCG +PL+GPWG I+YAP++V RQ
Sbjct: 114 KEEWVARLRRLMSIEVTWRAPWMPRMQVMYKCGDKPWVPLMGPWGAISYAPIMVRRQFGS 173
Query: 191 RQLISATHELKDFEFAYDKGFCKDRIQKIVKAWKMITKIQNGQFHDDTTEAYKTWHANKA 250
Q + TH+L EF Y + RI++I + WK ++ G+ D+ T Y TWH +
Sbjct: 174 EQFVPMTHQLDQLEFTYGEPETLKRIEEIAQDWKKTCRVDQGRVTDEVTTGYHTWHDQRV 233
Query: 251 KTVLVSPKIKTKIKLNAK---VIPDQQTEQVAREKECDELRKANSSLVQE-NERLQLEVK 310
K V+ PK +K +N + V+ + + + EKE +++ + ++E + +V+
Sbjct: 234 KNVIHPPKNPSKHPVNPEPQDVLLESELTRKRLEKEMMNMKRRHEDELEEVKKETARKVR 293
Query: 311 QGLLRNVELEKELNRL----KGSVSKQEQLEKEISALDPVARDLNKRMHRLRRDNEVSQT 370
L E + + + +++ ++L+ +AL R + + L+ D ++ +T
Sbjct: 294 VALKERDEWQSKFEEVSVANSSLLARIQELQSANNALQHEVRRQGQTIQELKNDCDMLET 353
Query: 371 TLK-------------SKIRKVTRRADELAECARTLSKVIAPTQSNSK-NELKFLGKLRI 430
++ ++R+ DEL+E K++ +K E + L +
Sbjct: 354 AMEGHKAQARVMADKTEELRREILPKDELSERLINHLKMVRDQYDKNKIPEKQILHRYNT 413
Query: 431 SLETRIM-EEKSTEMEKTRKNIEELREKMDAILVALEKDKIIADIAQSSNTMNDPPIRQS 490
++IM +E S M+K K EE+ ++ IL + DK SS T D ++Q+
Sbjct: 414 RARSKIMGDEHSERMDKIEKKQEEIMGQLSKILELISTDK-GKKATGSSGTPED--VQQT 473
Query: 491 TEGTTPKYHPLYNIPVEQH---------PFPFFKNEQVPVHNQLGFSLPTEVPPKVTITV 550
T P Y P + P ++ +PFF+ P P I+V
Sbjct: 474 ETNTDPVYPPGFTPPPARNVSIPMPSVGQYPFFRMPIGPPPTYAQQRPIGGASPSDPISV 533
Query: 551 PNLDDPEIRKELTGG-----EKASSSEKLEVMEERLRAVEGTDVFGNIDATKLCLVPDVI 610
P+LDDP+ +++L G + + +K ++ EERLR VEG ++ ++DA +LCLVPDV+
Sbjct: 534 PDLDDPKEQEKLKCGSVESKDNPDTHKKFDLFEERLRMVEGMGMYCSMDAIELCLVPDVV 593
Query: 611 LPPKLKVPEFEKYDGASCPKNHLIMYCRKMAAYVQNDKLLIHCFQDSLIGPASRWYMQLD 638
+PPK KVP+FEKYDG CP H+ MYCR+MAAY +DKLLIHCFQDSL G A++WY+QLD
Sbjct: 594 IPPKFKVPDFEKYDGTKCPVTHITMYCRRMAAYAHDDKLLIHCFQDSLTGAAAKWYVQLD 653
BLAST of Lcy05g018960 vs. NCBI nr
Match:
EOY01024.1 (Gag-pro-like protein [Theobroma cacao])
HSP 1 Score: 264.6 bits (675), Expect = 2.2e-66
Identity = 186/539 (34.51%), Postives = 277/539 (51.39%), Query Frame = 0
Query: 145 DVIWRAPWMSTRPMIYKCGKFQSLPLLGPWGGITYAPLLVVRQIWVRQLISATHELKDFE 204
+V WRAPWM P++YKCG +PL+GPWG I+YAP++V RQ Q + TH L E
Sbjct: 4 EVTWRAPWMPHHPVLYKCGNEPWVPLMGPWGAISYAPIMVRRQFGSEQFVPMTHRLNSLE 63
Query: 205 FAY-DKGFCKDRIQKIVKAWKMITKIQNGQFHDDTTEAYKTWHANKAKTVLVSPKIKTKI 264
FAY + GF K RI++I +AWK +++ G++ D+ T Y+ H + K V V PK +
Sbjct: 64 FAYGEPGFLK-RIEEITQAWKKTSRVDQGRYTDEVTTGYQIRHDQRVKDV-VYPK---ED 123
Query: 265 KLNAKVIPDQQTEQVAREKECDELRKANSSLVQENERLQLEVKQGLLRNVELEKELNRLK 324
L V P+ + + E + N+S Q E LQ E ++ E K++ +++
Sbjct: 124 ALRGPVDPEPRDALLESELARKKSEAENASWKQRYEDLQKECEKMKREVSEQRKKVRKME 183
Query: 325 GSV--------SKQEQLEKEISALDPVARDLNKRMHRLRRDNEVSQ-------------- 384
G + +L++EI + +L LRR Q
Sbjct: 184 GKYESLNDKFSATTSELQREIQVRENRGNELQTHNDGLRRQVRFQQESIQLLRQEYEELE 243
Query: 385 ---TTLKSKIRKVTRRADELAECARTLSKVIAPTQSNSKNELKFLGKLRISLETRIMEEK 444
TT + + ++ +++ + E + + + N++ +L ++ RIMEE+
Sbjct: 244 GVMTTYQQEYERLKQQSTRIQEWGESYRQ----AYTEKYNQMDYL-VWQMRERARIMEEE 303
Query: 445 STE-MEKTRKNIEELRE---KMDAILVALEKDKIIADIAQSSNTMNDPPIRQSTEGTTPK 504
E M++ + EE+RE KM ++++L K K I + + + N P + P
Sbjct: 304 QRERMDRMERAQEEMREQLAKMMELMMSLSKGK--RAIEEPTPSENPPAQDSGNQMDDPS 363
Query: 505 YHPLYNIPVEQ-----HPF---PFFKNEQVPVHNQL---GFSLPTEVPPKVTITVPNLDD 564
Y P + P Q HP P + N P+ +Q F + P I VP LDD
Sbjct: 364 YPPRFTPPHAQTSQRVHPQVIPPVYYNAPTPLGHQPTHGQFGPYPGINPAEPIHVPYLDD 423
Query: 565 PEIRKEL-----TGGEKASSSEKLEVMEERLRAVEGTDVFGNIDATKLCLVPDVILPPKL 624
P+ +++L GE +K +++EERLRA+EG D FG +DAT+LCLVPDV++P K
Sbjct: 424 PKEQEKLRKDSSQTGENEKDQKKYDLLEERLRAIEGVDRFGTMDATELCLVPDVLIPAKF 483
Query: 625 KVPEFEKYDGASCPKNHLIMYCRKMAAYVQNDKLLIHCFQDSLIGPASRWYMQLDSTHI 638
KVPEFEKYDG CP H+ MYCRKMAA +DKLLIH FQDSL G A+RWY+QLD I
Sbjct: 484 KVPEFEKYDGTKCPMAHITMYCRKMAAQSHDDKLLIHFFQDSLTGSAARWYVQLDRNRI 530
BLAST of Lcy05g018960 vs. NCBI nr
Match:
XP_017970492.1 (PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC108660725 [Theobroma cacao])
HSP 1 Score: 263.5 bits (672), Expect = 4.9e-66
Identity = 196/548 (35.77%), Postives = 283/548 (51.64%), Query Frame = 0
Query: 131 RSAWEVFFSELKVEDVIWRAPWMSTRPMIYKCGKFQSLPLLGPWGGITYAPLLVVRQIWV 190
+ W EL +V WRAPWM P++YKCG +PL+GPWG I+YAP++V RQ
Sbjct: 147 KEQWISRLRELMSVEVTWRAPWMPHHPVLYKCGNEPWVPLMGPWGAISYAPIMVRRQFGS 206
Query: 191 RQLISATHELKDFEFAY-DKGFCKDRIQKIVKAWKMITKIQNGQFHDDTTEAYKTWHANK 250
Q + TH L EFAY + GF K RI++I +AWK +++ G++ D+ T Y+ WH +
Sbjct: 207 EQFVPMTHRLNTLEFAYGEPGFLK-RIEEIAQAWKKTSRVDQGRYTDEVTTGYQIWHDQR 266
Query: 251 AKTVLVSPKIKTKIKLNAKVIPDQQTEQVAREKECDELRKANSSLVQENERLQLEVKQGL 310
K V V PK + L V P+ + + E + N+S Q E LQ E ++
Sbjct: 267 VKDV-VYPK---EDALRGPVDPEPRDALLESELARKKSEAENASWKQRYEDLQKECEKMK 326
Query: 311 LRNVELEKELNRLKGSVSKQEQL-EKEISALDPVARDLNKRMHRLRRDNEVSQTTLKSKI 370
E K++ +++G K E L +K + + R++ R + RDNE+ T +
Sbjct: 327 REVSEQRKKVRKMEG---KYESLNDKFFATTSELQREIQVREN---RDNELQ--THNDGL 386
Query: 371 RKVTRRADELAECARTLSKVIAPTQSNSKNELKFLGKLRISLETRIME----------EK 430
R+ R E + R + + + + E + L + TRI E EK
Sbjct: 387 RRQVRFQQESIQLLRQEYEELEGVMTTYQQEYERLKQ----QSTRIQEWGESYRQAYTEK 446
Query: 431 STEME------KTRKNIEELRE---KMDAILVALEKDK-IIADIAQSSNTMNDPPIRQS- 490
+M+ + EE+RE KM ++++L K K I + A S N PP + S
Sbjct: 447 YNQMDYLVWQMREVAYKEEMREQLAKMMELMMSLSKGKRAIEEPAPSEN----PPAQDSG 506
Query: 491 TEGTTPKYHPLYNIPVEQ-----HPF---PFFKNE-----QVPVHNQLGFSLPTEVPPKV 550
+ P Y P + P Q HP P + N P+H Q F + + P
Sbjct: 507 NQREDPPYPPGFTPPHAQTSQRVHPQVIPPVYYNAPPPLGHQPIHGQ--FGPYSRINPAE 566
Query: 551 TITVPNLDDPEIRKEL-----TGGEKASSSEKLEVMEERLRAVEGTDVFGNIDATKLCLV 610
I VP+LDDP+ +++L GE +K +++EERLRA+EG D FG +DAT+LCLV
Sbjct: 567 PINVPDLDDPKEQEKLRKDSSQTGENEKDQKKYDLLEERLRAIEGVDRFGTMDATELCLV 626
Query: 611 PDVILPPKLKVPEFEKYDGASCPKNHLIMYCRKMAAYVQNDKLLIHCFQDSLIGPASRWY 638
PDV++P K KVP+FEKYDG CP H+ MYCRKMAA +DKLLIH FQDSL A++WY
Sbjct: 627 PDVLIPAKFKVPKFEKYDGTKCPMAHITMYCRKMAAQSHDDKLLIHFFQDSLTRSAAQWY 671
BLAST of Lcy05g018960 vs. TAIR 10
Match:
AT1G73630.1 (EF hand calcium-binding protein family )
HSP 1 Score: 43.9 bits (102), Expect = 5.6e-04
Identity = 26/73 (35.62%), Postives = 36/73 (49.32%), Query Frame = 0
Query: 56 EMKAIFREHDFNGDGHLSIQELSRAFGTLTAFIPRYRAVCGFFIADADGDGFINEQELEK 115
E+K +F + D NGDG +S+ EL F ++ D D DGFIN++E
Sbjct: 20 ELKKVFDKFDANGDGKISVSELGNVFKSMGTSYTEEELNRVLDEIDIDCDGFINQEE--- 79
Query: 116 VVDYAIKCWSSSS 129
+A C SSSS
Sbjct: 80 ---FATICRSSSS 86
BLAST of Lcy05g018960 vs. TAIR 10
Match:
AT1G24620.1 (EF hand calcium-binding protein family )
HSP 1 Score: 43.9 bits (102), Expect = 5.6e-04
Identity = 23/67 (34.33%), Postives = 35/67 (52.24%), Query Frame = 0
Query: 46 KNSSFKLQREEMKAIFREHDFNGDGHLSIQELSRAFGTLTAFIPRYRAVCGFFIADADGD 105
K S K + E++A+F++ D NGDG +S +EL +L +P D GD
Sbjct: 27 KARSGKTEIRELEAVFKKFDVNGDGKISSKELGAIMTSLGHEVPEEELEKAITEIDRKGD 86
Query: 106 GFINEQE 113
G+IN +E
Sbjct: 87 GYINFEE 93
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A5A7T1W2 | 6.8e-74 | 33.56 | Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 ... | [more] |
A0A061E8N3 | 9.6e-68 | 31.80 | Retrotrans_gag domain-containing protein OS=Theobroma cacao OX=3641 GN=TCM_01093... | [more] |
A0A061EFF5 | 1.1e-66 | 34.51 | Gag-pro-like protein OS=Theobroma cacao OX=3641 GN=TCM_010953 PE=4 SV=1 | [more] |
A0A061EXR3 | 8.4e-64 | 33.16 | G-patch domain-containing protein OS=Theobroma cacao OX=3641 GN=TCM_024883 PE=4 ... | [more] |
A0A061E378 | 1.9e-63 | 31.12 | G-patch domain-containing protein OS=Theobroma cacao OX=3641 GN=TCM_008095 PE=4 ... | [more] |
Match Name | E-value | Identity | Description | |
KAA0036933.1 | 1.4e-73 | 33.56 | uncharacterized protein E6C27_scaffold86G00060 [Cucumis melo var. makuwa] | [more] |
XP_031738551.1 | 7.3e-70 | 32.45 | LOW QUALITY PROTEIN: uncharacterized protein LOC101203611 [Cucumis sativus] | [more] |
EOY01013.1 | 2.0e-67 | 31.80 | Uncharacterized protein TCM_010930 [Theobroma cacao] | [more] |
EOY01024.1 | 2.2e-66 | 34.51 | Gag-pro-like protein [Theobroma cacao] | [more] |
XP_017970492.1 | 4.9e-66 | 35.77 | PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC108660725 [Theobroma ... | [more] |
Match Name | E-value | Identity | Description | |
AT1G73630.1 | 5.6e-04 | 35.62 | EF hand calcium-binding protein family | [more] |
AT1G24620.1 | 5.6e-04 | 34.33 | EF hand calcium-binding protein family | [more] |