Lcy05g018860 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy05g018860
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	Unknown protein
Location	Chr05: 38615706 .. 38616520 (+)
RNA-Seq Expression	Lcy05g018860
Synteny	Lcy05g018860

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGAGCCTTTAGAGAGTGAGATTTAAGAGTGCGTGAATGGGCATTGTAACAGATTGAATAAAAAAAGGGAAATGGGCAATTTCCCGGTCAAAAAGGGTAAAAGAAAAGGGGGAAACTTCCCTCCAAATTTTTGGTCAACTGACCAAAAAAAAAAAAAAAAAAGGAAAAATTCCCCTCACGCACGCTCTCTCTCCCCGATAACCCCCTCCCTCTCGTCTCTGTCTCTCTAACTCAGTTCTCTCTCTCCGTCGCCCAGAACGCCAATGTCGCCGCCGCCTTCTCTGAGCAGACCGCCGCCGCACGTCGAAACGCCTCATGCCGCCGTCTGATTGCCGCTGCCGGTAAGTGCTCAGCCCTTTCTCTCTCTCACTCTCTCTCTCGTCTCTTTCTCTCTCTAACTCAGCTCTCTCTCTGCGCACATCGAATCGCCAACGCCGCCTCCTTCGTCATTCCCTGTCGAGTTCCGCCGCGCCGCCATCGTCTCTCTCCGCCGCCGGTAACTCCCTGTTCTTTTCTCTCTCCCGTTTACATCCCGCTCGGCCTCACGTTTCTCTCTCTCTCTCGGGTTGCAGGTTTGTCGCCCCTCATCGCCGCGCCGCCCTCACGGAGTTGCTCGCCGTCGCCCAGAACGTCGCGCAGCCGTCGCCTAGAACCGCGCCGCCGTCGCCCACAAGCAACCACTGCCGCCCTCGGTCTTGTTTATTTTTCAGATCTGTGGTCGCCGCCGTTCAAGTTTGTTCGTCGCTTTTCGGATATGTGTGTCGCTTTCAGATCGGTTGTCGTCGTCGTTCGATTGTTCAACCTTACTTCTAA

mRNA sequence

ATGAGAGCCTTTAGAGACTCTCTCTCTGCGCACATCGAATCGCCAACGCCGCCTCCTTCGTCATTCCCTGTCGAGTTCCGCCGCGCCGCCATCGTCTCTCTCCGCCGCCGGTTTGTCGCCCCTCATCGCCGCGCCGCCCTCACGGAGTTGCTCGCCGTCGCCCAGAACGTCGCGCAGCCGTCGCCTAGAACCGCGCCGCCGTCGCCCACAAGCAACCACTGCCGCCCTCGGTCTTGTTTATTTTTCAGATCTGTGGTCGCCGCCGTTCAAGTTTGTTCGTCGCTTTTCGGATATGTGTGTCGCTTTCAGATCGGTTGTCGTCGTCGTTCGATTGTTCAACCTTACTTCTAA

Coding sequence (CDS)

ATGAGAGCCTTTAGAGACTCTCTCTCTGCGCACATCGAATCGCCAACGCCGCCTCCTTCGTCATTCCCTGTCGAGTTCCGCCGCGCCGCCATCGTCTCTCTCCGCCGCCGGTTTGTCGCCCCTCATCGCCGCGCCGCCCTCACGGAGTTGCTCGCCGTCGCCCAGAACGTCGCGCAGCCGTCGCCTAGAACCGCGCCGCCGTCGCCCACAAGCAACCACTGCCGCCCTCGGTCTTGTTTATTTTTCAGATCTGTGGTCGCCGCCGTTCAAGTTTGTTCGTCGCTTTTCGGATATGTGTGTCGCTTTCAGATCGGTTGTCGTCGTCGTTCGATTGTTCAACCTTACTTCTAA

Protein sequence

MRAFRDSLSAHIESPTPPPSSFPVEFRRAAIVSLRRRFVAPHRRAALTELLAVAQNVAQPSPRTAPPSPTSNHCRPRSCLFFRSVVAAVQVCSSLFGYVCRFQIGCRRRSIVQPYF

Homology

The following BLAST results are available for this feature:

BLAST of Lcy05g018860 vs.


Match Name	E-value	Identity	Description

BLAST of Lcy05g018860 vs.


Match Name	E-value	Identity	Description

BLAST of Lcy05g018860 vs.


Match Name	E-value	Identity	Description

BLAST of Lcy05g018860 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..21

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy05g018860.1	Lcy05g018860.1	mRNA