Lcy05g018760 (gene) Sponge gourd (P93075) v1

Overview
NameLcy05g018760
Typegene
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionCysteine-rich RLK (Receptor-like protein kinase) 8
LocationChr05: 37994183 .. 37996840 (+)
RNA-Seq ExpressionLcy05g018760
SyntenyLcy05g018760
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTGTTGAATGAACTTGCGTCCTATCGGCCATTCTGTAATTGTGGCAAATGTTCGTGTGAAGGAGTTCAAAAGCTTGTTGACTATTTTCAAATAGAATATATTATGGCATTCCTTATGGGTTTGAATGAACCATTCAATCAAATTCGTACTCAATTGCTTCTCATGGAGCCTGAACCAACAATTCAACGAGCATTCTCCTTAGTAGCACAAGAAGTGGAACAAAGAGTTTCTTCAACACTGCCAACGACTAACTCCACTAATTCGGTAAATTCCTCGACTACTCTTCTCGTTAAAAGTTCTTCTACTTCTCGAAATTAGTCAAAATCTACTAAGAAGAAAGAAAGTTCATTTTGTACCTCATTGCAATGTTCGAGGACATATTGTGGATCGTTGTTACAAGATAAATGGATACCCCTTGGGTATCGCAATCAGAAGACCAATTCCAATTCATCGAAGTCAGAAACCACTTCTTCTGCGCGATTCCTTATCTGCTCTAACTACTTTGCAATGCCAGGGTTTATTGACTGCTCTCCAAAGTCATCTTACTAAAATGGCTTCTTCTGATACTTCTGATACTTCATCGTCTTCTCATGTAGCAAGTATTGTTCCAATTTCTCATGATTTTTCTTCTCCATCATGGGTACTTGATTCAAGAGCATCCTCGCATCTTTCCTACTTGAGAGATTTTTTTCACTTGTTTGACACCAATTCAAAATAAGTCTGTTACTTTGCCTAATCAACAAGTTTGTTACTTTGCCTAATCAAACTCATATTTCAGTTGATTTTGTTGGAGATATTCAGCTAAACCGTCATATATTGCTCAAGAATGTGATGTTTATACCGTTCTTTACCTTTAATCTGATATCTATCAATGTGCTAACTACTGATCAACCTCTTATTGTCAAGTTTGTTGAGAACTCATGTTTTCTTCAGGATAAGTTCTTTTTGAAGACAATTGGGAAGGCTGACTTTTGGCCAAGACTATTTCTGTTGAGAGTTGATATTTTTAAGCATTCTTTGTCTACTACTACTATGATAAGACCAATTTATTATACACTTAGAATCTCCCAATTTGCTTAACTTAGTTGAATTCCTTGCGAAAAATGCTTTAAAATGAGTATAATATGTCTATAGGTCTTCACTGGAGCTTTGGAAGCGATTCGGGGCTTAAATGAGCAAAACCAAAGCGTGAAATGACCATTCTGCCCTTGGTACTGTCACAACGTCGATACGCTGCCATTGAAGGGTCGAGACACTGCTAAAATAAGGAAATTTTGTGGGCGCCAAGCTGAAGCTACACCGTCGAGACGCTGCACCTATAGCGTCTCGACGCTATGTTGATCCGAGAGATTCATTCCATATATGAAGGCCTAGCGTCGCGACGCTGTGTCCTAGCGTCTCGACACTAGGCAGTTTCCAAAATCGAATTTTTTCCAATTTTGGCTGAAATTTTCCTTGTTTGAAAACCCAATTCAGCACCATTCTACCATGAATTGAAGGCCAAGAAACTCTATAAATAGAGGTCTTTGGTGTAGGTTTAGAATCATCCCTCAATACAATATTGTAGCCACCTTTCTCATTACTTTTCTAGAGTTCTTTTAAGTTTTCTTAGTCTAAGGGTCGGTTGATCGAGCCTCGAGCTTGGAGGTGCTTGTCTATAGCCAACTAAGCTCGGATCGTTGTAATCGGGACCTTGGTTTGTAAGTTTGATTCAATTTTATGAGATTTCCATTTTTCATTACTTAGTTAATTGTCTTTATGATTTTAGTTGTTTGCATACAAGTTTAGATTGTGGTAGGAAAGATTGACAACCTTGATTGTGCCCTGTCTAAATTTACTTGCTAAATCTAAGTAGCAAATAGGCTAACGTTATGATATTACGCATGCGTCCCTTGAACTAAATGATTTAATCAATTGTAATTGTGGTTTGTTGCCCGTTGCATGTGAATTAATTCGGCTAGATCTCAATGCGGTTTAGATTAGTTAAATAGGCCAATTAATTAATTTAAACTAGAATCAAACTTAGCGTTTGCATGTTTGTGATAGTTGGATCATGGCTCTCGGTTTGTTGCCGGAGTACGCCAGACTTAGATAGTTAATTAAATATCAATTGATAATCGATGAATGAAATTAATCAAACTTAACGCCGAGTTCAACCCCGATTACAGTGATCCTCGTGGTACGATCAACTAACCCCACCTTTACTTTCCTTGCATTTAATTTTCCTTATTTATTTTCCCACTTTTACTCTATGTCTTAATCTTTTATCCATAAACCCCCGTTTTTGGTTACCTCAAAAACACAAAAGAATTTAGAAATAAACCGATTGTTCCCTGTGATCGACTCCGACCACTACTGCTACAAGTTAGCTTTAGGAATCGTGGATTATAAATTTATTTGACAAGAGACCGCGAAAATCTCTTCCGTCATTTTGTAACTCGGTATCTTGGCATGATAGACTTGGTCATCCCTCCCCCAAACACCTTGTTGCTTTAAAAGATTTGTAACTCGGTACCTGATGGTTATATCAATACAGATGTTTCACAAGCTGCTATTCCTAACGTAGTAGAAAGTCTCCTTGAAGCTTCTAATACCATTGACAACTCTAATGATGACAAAACTTGTGTCCCTCGACGCTCAAATAGGCAAATCTAA

mRNA sequence

ATGTTGTTGAATGAACTTGCGTCCTATCGGCCATTCTGTAATTGTGGCAAATGTTCGTGTGAAGGAGTTCAAAAGCTTGTTGACTATTTTCAAATAGAATATATTATGGCATTCCTTATGGGTTTGAATGAACCATTCAATCAAATTCGTACTCAATTGCTTCTCATGGAGCCTGAACCAACAATTCAACGAGCATTCTCCTTAGTAGCACAAGAAGTGGAACAAAGAGTTTCTTCAACACTGCCAACGACTAACTCCACTAATTCGATTTGTAACTCGGTACCTGATGGTTATATCAATACAGATGTTTCACAAGCTGCTATTCCTAACGTAGTAGAAAGTCTCCTTGAAGCTTCTAATACCATTGACAACTCTAATGATGACAAAACTTGTGTCCCTCGACGCTCAAATAGGCAAATCTAA

Coding sequence (CDS)

ATGTTGTTGAATGAACTTGCGTCCTATCGGCCATTCTGTAATTGTGGCAAATGTTCGTGTGAAGGAGTTCAAAAGCTTGTTGACTATTTTCAAATAGAATATATTATGGCATTCCTTATGGGTTTGAATGAACCATTCAATCAAATTCGTACTCAATTGCTTCTCATGGAGCCTGAACCAACAATTCAACGAGCATTCTCCTTAGTAGCACAAGAAGTGGAACAAAGAGTTTCTTCAACACTGCCAACGACTAACTCCACTAATTCGATTTGTAACTCGGTACCTGATGGTTATATCAATACAGATGTTTCACAAGCTGCTATTCCTAACGTAGTAGAAAGTCTCCTTGAAGCTTCTAATACCATTGACAACTCTAATGATGACAAAACTTGTGTCCCTCGACGCTCAAATAGGCAAATCTAA

Protein sequence

MLLNELASYRPFCNCGKCSCEGVQKLVDYFQIEYIMAFLMGLNEPFNQIRTQLLLMEPEPTIQRAFSLVAQEVEQRVSSTLPTTNSTNSICNSVPDGYINTDVSQAAIPNVVESLLEASNTIDNSNDDKTCVPRRSNRQI
Homology
BLAST of Lcy05g018760 vs. ExPASy TrEMBL
Match: A0A6J1D5E3 (uncharacterized protein LOC111017196 OS=Momordica charantia OX=3673 GN=LOC111017196 PE=4 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 1.2e-20
Identity = 60/128 (46.88%), Postives = 79/128 (61.72%), Query Frame = 0

Query: 2   LLNELASYRPFCNCGKCSCEGVQKLVDYFQIEYIMAFLMGLNEPFNQIRTQLLLMEPEPT 61
           L  ELA+YRP C+CG+C+C GV+ LV+YFQ EY+M FLMGLN+ F+QIR  LLLM P PT
Sbjct: 104 LWTELAAYRPNCSCGRCTCGGVKSLVEYFQTEYVMCFLMGLNDSFSQIRAXLLLMXPPPT 163

Query: 62  IQRAFSLVAQEVEQRVSSTLPTTNSTNSICNSVPDGYINTDVSQAAIPNVVESLLEASNT 121
           I  AF L+AQEV+QR  S +   NS+ S       G  N + S     N+  S   ++ +
Sbjct: 164 INXAFXLIAQEVQQRXISXISXANSSASSTAFXVXGTQNXNSS-----NLSNSSTSSNRS 223

Query: 122 IDNSNDDK 130
           + N    K
Sbjct: 224 LSNQGKRK 226

BLAST of Lcy05g018760 vs. ExPASy TrEMBL
Match: A0A6J1DNP7 (uncharacterized protein LOC111022065 OS=Momordica charantia OX=3673 GN=LOC111022065 PE=4 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 8.1e-20
Identity = 57/103 (55.34%), Postives = 72/103 (69.90%), Query Frame = 0

Query: 2   LLNELASYRPFCNCGKCSCEGVQKLVDYFQIEYIMAFLMGLNEPFNQIRTQLLLMEPEPT 61
           L +ELA YRP C+CG+CS  GV+ +  ++Q EY+MAFLMGLN  F+QIR QLLLMEP PT
Sbjct: 161 LWSELALYRPACSCGRCSYGGVKSIEAHYQQEYVMAFLMGLNVSFSQIRAQLLLMEPAPT 220

Query: 62  IQRAFSLVAQEVEQR-----------VSSTLPTTNSTNSICNS 94
           I RAF+LVAQE++QR            S+   T+NS+NS  NS
Sbjct: 221 INRAFALVAQEMQQRSISLPSVTSPTASAVRATSNSSNSRLNS 263

BLAST of Lcy05g018760 vs. ExPASy TrEMBL
Match: A0A5J5BIH5 (Uncharacterized protein OS=Nyssa sinensis OX=561372 GN=F0562_023418 PE=4 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 3.1e-19
Identity = 50/85 (58.82%), Postives = 69/85 (81.18%), Query Frame = 0

Query: 5   ELASYRPFCNCGKCSCEGVQKLVDYFQIEYIMAFLMGLNEPFNQIRTQLLLMEPEPTIQR 64
           EL++YRP C+CGKCSC GV+ L D+ Q+EYIM+FLMGL++ F+Q+R QLLLM+P P I R
Sbjct: 110 ELSNYRPNCSCGKCSCGGVKNLNDHHQMEYIMSFLMGLDDSFSQVRGQLLLMDPIPPINR 169

Query: 65  AFSLVAQEVEQRVSSTLPTTNSTNS 90
            FSL+ QE +QR+  T P+++S+NS
Sbjct: 170 VFSLIVQEEQQRM--TNPSSDSSNS 192

BLAST of Lcy05g018760 vs. ExPASy TrEMBL
Match: A0A5J5C4X6 (Retrotran_gag_3 domain-containing protein OS=Nyssa sinensis OX=561372 GN=F0562_001883 PE=4 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 8.9e-19
Identity = 57/125 (45.60%), Postives = 81/125 (64.80%), Query Frame = 0

Query: 5   ELASYRPFCNCGKCSCEGVQKLVDYFQIEYIMAFLMGLNEPFNQIRTQLLLMEPEPTIQR 64
           EL++YRP C+CGKCSC GV+ + D+ Q+EYIM+FLMGL++ F+Q+R QLLLM+P P I R
Sbjct: 98  ELSNYRPNCSCGKCSCGGVKNINDHHQMEYIMSFLMGLDDSFSQVRGQLLLMDPMPPINR 157

Query: 65  AFSLVAQEVEQRVSSTLPTTNSTNSICNSVPDGYINTDVSQAAIPNVVESLLEASNTIDN 124
            FSL+ QE +QR   T P+++S+NS         + TDV+++       S    S+   N
Sbjct: 158 VFSLIVQEEQQR--RTNPSSDSSNS--TGTMAFVVKTDVNKSGGSGPQNSQNSNSSASKN 217

Query: 125 SNDDK 130
              DK
Sbjct: 218 QKKDK 218

BLAST of Lcy05g018760 vs. ExPASy TrEMBL
Match: A0A6J1E1U3 (uncharacterized protein LOC111025199 OS=Momordica charantia OX=3673 GN=LOC111025199 PE=4 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 8.9e-19
Identity = 50/86 (58.14%), Postives = 63/86 (73.26%), Query Frame = 0

Query: 2   LLNELASYRPFCNCGKCSCEGVQKLVDYFQIEYIMAFLMGLNEPFNQIRTQLLLMEPEPT 61
           L  ELASY   C C KCSC GV+ + +YFQ+EY+M FLMGLN+ F+QIR QLLLMEP P+
Sbjct: 62  LWTELASYYSSCTCSKCSCGGVKAIGEYFQMEYVMCFLMGLNDSFSQIRAQLLLMEPAPS 121

Query: 62  IQRAFSLVAQEVEQRVSSTLPTTNST 88
           I  AF+L+AQEV+Q   S+    N+T
Sbjct: 122 INWAFALIAQEVQQCAISSPSLANAT 147

BLAST of Lcy05g018760 vs. NCBI nr
Match: XP_038896588.1 (uncharacterized protein LOC120084843 [Benincasa hispida])

HSP 1 Score: 111.7 bits (278), Expect = 5.2e-21
Identity = 53/80 (66.25%), Postives = 64/80 (80.00%), Query Frame = 0

Query: 1   MLLNELASYRPFCNCGKCSCEGVQKLVDYFQIEYIMAFLMGLNEPFNQIRTQLLLMEPEP 60
           ML NEL SY P C+CGKC+C GV+ L  YFQ EY+MAFLMGLN+    IR+QLLLMEPEP
Sbjct: 79  MLWNELISYCPSCSCGKCTCGGVKNLQTYFQTEYVMAFLMGLNDSSAPIRSQLLLMEPEP 138

Query: 61  TIQRAFSLVAQEVEQRVSST 81
           +I RAFSLVAQE++Q+  S+
Sbjct: 139 SINRAFSLVAQEIDQKAYSS 158

BLAST of Lcy05g018760 vs. NCBI nr
Match: XP_038905564.1 (uncharacterized protein LOC120091546 [Benincasa hispida])

HSP 1 Score: 110.2 bits (274), Expect = 1.5e-20
Identity = 58/112 (51.79%), Postives = 77/112 (68.75%), Query Frame = 0

Query: 2   LLNELASYRPFCNCGKCSCEGVQKLVDYFQIEYIMAFLMGLNEPFNQIRTQLLLMEPEPT 61
           L NELASYRP C+CG+C+C+GV+ L  Y Q E++M FLMGLNE F+QI TQLLLME EP+
Sbjct: 104 LWNELASYRPSCSCGRCTCDGVKDLNTYLQTEHVMTFLMGLNESFSQIHTQLLLMELEPS 163

Query: 62  IQRAFSLVAQEVEQRV---SSTLPTTNSTNSICNSVPDGYINTDVSQAAIPN 111
           I +AFS V QEVEQR      T+ +  ST +    V +   N + +Q+++ N
Sbjct: 164 INKAFSSVIQEVEQRTIPSYQTIVSNQSTQNAALLVKNTSSNANSNQSSLSN 215

BLAST of Lcy05g018760 vs. NCBI nr
Match: XP_022148562.1 (uncharacterized protein LOC111017196 [Momordica charantia])

HSP 1 Score: 109.4 bits (272), Expect = 2.6e-20
Identity = 60/128 (46.88%), Postives = 79/128 (61.72%), Query Frame = 0

Query: 2   LLNELASYRPFCNCGKCSCEGVQKLVDYFQIEYIMAFLMGLNEPFNQIRTQLLLMEPEPT 61
           L  ELA+YRP C+CG+C+C GV+ LV+YFQ EY+M FLMGLN+ F+QIR  LLLM P PT
Sbjct: 104 LWTELAAYRPNCSCGRCTCGGVKSLVEYFQTEYVMCFLMGLNDSFSQIRAXLLLMXPPPT 163

Query: 62  IQRAFSLVAQEVEQRVSSTLPTTNSTNSICNSVPDGYINTDVSQAAIPNVVESLLEASNT 121
           I  AF L+AQEV+QR  S +   NS+ S       G  N + S     N+  S   ++ +
Sbjct: 164 INXAFXLIAQEVQQRXISXISXANSSASSTAFXVXGTQNXNSS-----NLSNSSTSSNRS 223

Query: 122 IDNSNDDK 130
           + N    K
Sbjct: 224 LSNQGKRK 226

BLAST of Lcy05g018760 vs. NCBI nr
Match: XP_038875043.1 (uncharacterized protein LOC120067569 [Benincasa hispida])

HSP 1 Score: 108.6 bits (270), Expect = 4.4e-20
Identity = 52/82 (63.41%), Postives = 63/82 (76.83%), Query Frame = 0

Query: 1   MLLNELASYRPFCNCGKCSCEGVQKLVDYFQIEYIMAFLMGLNEPFNQIRTQLLLMEPEP 60
           ML NEL SYRP C+CGK +C  V+ L  YFQ EY+MAFLMGLN+    IR+QLLLMEPEP
Sbjct: 165 MLWNELISYRPSCSCGKYTCGSVKNLQTYFQTEYVMAFLMGLNDSSASIRSQLLLMEPEP 224

Query: 61  TIQRAFSLVAQEVEQRVSSTLP 83
           +I RAFSLV QE++Q+  S+ P
Sbjct: 225 SINRAFSLVLQEIDQKAFSSSP 246

BLAST of Lcy05g018760 vs. NCBI nr
Match: XP_038904477.1 (uncharacterized protein LOC120090845 [Benincasa hispida])

HSP 1 Score: 108.6 bits (270), Expect = 4.4e-20
Identity = 63/130 (48.46%), Postives = 83/130 (63.85%), Query Frame = 0

Query: 2   LLNELASYRPFCNCGKCSCEGVQKLVDYFQIEYIMAFLMGLNEPFNQIRTQLLLMEPEPT 61
           L NEL SYRP C+CGKC+C GV+ L  YFQ EY++AFLMGLN+    IR+QLLLMEP+PT
Sbjct: 104 LWNELISYRPSCSCGKCTCGGVKNLQTYFQTEYVIAFLMGLNDSSAPIRSQLLLMEPKPT 163

Query: 62  IQRAFSLVAQEVEQRV--SSTLPTTNSTNSICNSVPDGYINTDVSQAAIPNVVESLLEAS 121
           I RAFSLVAQE++Q+   SS     +S+N+    V +G   +  S   +P+       + 
Sbjct: 164 INRAFSLVAQEIDQKAYSSSFGNAISSSNATALLVKNG---SSASHQTVPSY------SH 223

Query: 122 NTIDNSNDDK 130
           NT  N   D+
Sbjct: 224 NTNQNKKKDR 224

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1D5E31.2e-2046.88uncharacterized protein LOC111017196 OS=Momordica charantia OX=3673 GN=LOC111017... [more]
A0A6J1DNP78.1e-2055.34uncharacterized protein LOC111022065 OS=Momordica charantia OX=3673 GN=LOC111022... [more]
A0A5J5BIH53.1e-1958.82Uncharacterized protein OS=Nyssa sinensis OX=561372 GN=F0562_023418 PE=4 SV=1[more]
A0A5J5C4X68.9e-1945.60Retrotran_gag_3 domain-containing protein OS=Nyssa sinensis OX=561372 GN=F0562_0... [more]
A0A6J1E1U38.9e-1958.14uncharacterized protein LOC111025199 OS=Momordica charantia OX=3673 GN=LOC111025... [more]
Match NameE-valueIdentityDescription
XP_038896588.15.2e-2166.25uncharacterized protein LOC120084843 [Benincasa hispida][more]
XP_038905564.11.5e-2051.79uncharacterized protein LOC120091546 [Benincasa hispida][more]
XP_022148562.12.6e-2046.88uncharacterized protein LOC111017196 [Momordica charantia][more]
XP_038875043.14.4e-2063.41uncharacterized protein LOC120067569 [Benincasa hispida][more]
XP_038904477.14.4e-2048.46uncharacterized protein LOC120090845 [Benincasa hispida][more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR34222FAMILY NOT NAMEDcoord: 15..88
NoneNo IPR availablePANTHERPTHR34222:SF25SUBFAMILY NOT NAMEDcoord: 15..88

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lcy05g018760.1Lcy05g018760.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005488 binding