Lcy05g018430 (gene) Sponge gourd (P93075) v1

Overview
NameLcy05g018430
Typegene
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionAA_kinase domain-containing protein
LocationChr05: 36553370 .. 36553585 (-)
RNA-Seq ExpressionLcy05g018430
SyntenyLcy05g018430
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATGCAGAAGCGGTCTTCAACACCCACGTGGTGAATAGAGGGGTCATTCCTGAGAGAAGTTTAGTTCCAAGCGCCCAATCCCAGCTTGACCTCGCCCATAGCATTAATGAGAGGGGTTGGGGTAGATTTACTAGGCACCCGGAGGCCGCCGTAGTCCCAATAGTTAGGGAGTTTTACTCGAACATGGTGGAAGGATCCACAACTTCCCTTTGA

mRNA sequence

ATGGATGCAGAAGCGGTCTTCAACACCCACGTGGTGAATAGAGGGGTCATTCCTGAGAGAAGTTTAGTTCCAAGCGCCCAATCCCAGCTTGACCTCGCCCATAGCATTAATGAGAGGGGTTGGGGTAGATTTACTAGGCACCCGGAGGCCGCCGTAGTCCCAATAGTTAGGGAGTTTTACTCGAACATGGTGGAAGGATCCACAACTTCCCTTTGA

Coding sequence (CDS)

ATGGATGCAGAAGCGGTCTTCAACACCCACGTGGTGAATAGAGGGGTCATTCCTGAGAGAAGTTTAGTTCCAAGCGCCCAATCCCAGCTTGACCTCGCCCATAGCATTAATGAGAGGGGTTGGGGTAGATTTACTAGGCACCCGGAGGCCGCCGTAGTCCCAATAGTTAGGGAGTTTTACTCGAACATGGTGGAAGGATCCACAACTTCCCTTTGA

Protein sequence

MDAEAVFNTHVVNRGVIPERSLVPSAQSQLDLAHSINERGWGRFTRHPEAAVVPIVREFYSNMVEGSTTSL
Homology
BLAST of Lcy05g018430 vs. ExPASy TrEMBL
Match: A0A5D3BBY3 (Putative S-locus lectin protein kinase family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold26G00020 PE=4 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 1.3e-10
Identity = 37/69 (53.62%), Postives = 43/69 (62.32%), Query Frame = 0

Query: 2  DAEAVFNTHVVNRGVIPERSLVPSAQSQLDLAHSINERGWGRFTRHPEAAVVPIVREFYS 61
          DA   +  HVV   VIPER L P    Q  L  +I +RGW  F + PE AVV IVREFY+
Sbjct: 28 DAADGYKKHVVKSSVIPERGLAPCEVHQPQLYQNIMQRGWSDFVKQPEPAVVSIVREFYA 87

Query: 62 NMVEGSTTS 71
          NMVEGS+ S
Sbjct: 88 NMVEGSSRS 96

BLAST of Lcy05g018430 vs. ExPASy TrEMBL
Match: A0A0A0KER1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G149380 PE=4 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 5.5e-09
Identity = 35/69 (50.72%), Postives = 42/69 (60.87%), Query Frame = 0

Query: 2  DAEAVFNTHVVNRGVIPERSLVPSAQSQLDLAHSINERGWGRFTRHPEAAVVPIVREFYS 61
          DA   +   VV   VIPER L P    Q  L  +I +RGW  F + PE AV+ IVREFY+
Sbjct: 28 DAADRYRKLVVKSSVIPERGLAPCEVHQPQLFQNIMQRGWSDFVKQPEPAVLSIVREFYA 87

Query: 62 NMVEGSTTS 71
          NMVEGS+ S
Sbjct: 88 NMVEGSSRS 96

BLAST of Lcy05g018430 vs. ExPASy TrEMBL
Match: A0A0A0KNI1 (AA_kinase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G468460 PE=4 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 1.0e-07
Identity = 33/69 (47.83%), Postives = 40/69 (57.97%), Query Frame = 0

Query: 2  DAEAVFNTHVVNRGVIPERSLVPSAQSQLDLAHSINERGWGRFTRHPEAAVVPIVREFYS 61
          DA   +   VV     PER L P    Q  L  +I +RGW  F + PE AV+ IVREFY+
Sbjct: 28 DAADRYRKLVVKSSTKPERGLAPCEVHQPQLFQNIMQRGWSDFVKQPEPAVLSIVREFYA 87

Query: 62 NMVEGSTTS 71
          NMVEGS+ S
Sbjct: 88 NMVEGSSRS 96

BLAST of Lcy05g018430 vs. ExPASy TrEMBL
Match: A0A061F2U9 (Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_024087 PE=4 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 1.8e-04
Identity = 24/65 (36.92%), Postives = 41/65 (63.08%), Query Frame = 0

Query: 1  MDAEAVFNTHVVNRGVIPERSLVPSAQSQLDLAHSINERGWGRFTRHPEAAVVPIVREFY 60
          ++A   ++T ++N+  IPER +        ++   I++R W +F   P+A VVP+VREFY
Sbjct: 22 VEAFTRYHTSLINQRPIPERGIEIPILPYKEINDMIHDRYWCQFCHQPDATVVPVVREFY 81

Query: 61 SNMVE 66
          +N+VE
Sbjct: 82 ANVVE 86

BLAST of Lcy05g018430 vs. NCBI nr
Match: KAA0033353.1 (putative S-locus lectin protein kinase family protein [Cucumis melo var. makuwa] >TYJ96637.1 putative S-locus lectin protein kinase family protein [Cucumis melo var. makuwa])

HSP 1 Score: 75.1 bits (183), Expect = 2.7e-10
Identity = 37/69 (53.62%), Postives = 43/69 (62.32%), Query Frame = 0

Query: 2  DAEAVFNTHVVNRGVIPERSLVPSAQSQLDLAHSINERGWGRFTRHPEAAVVPIVREFYS 61
          DA   +  HVV   VIPER L P    Q  L  +I +RGW  F + PE AVV IVREFY+
Sbjct: 28 DAADGYKKHVVKSSVIPERGLAPCEVHQPQLYQNIMQRGWSDFVKQPEPAVVSIVREFYA 87

Query: 62 NMVEGSTTS 71
          NMVEGS+ S
Sbjct: 88 NMVEGSSRS 96

BLAST of Lcy05g018430 vs. NCBI nr
Match: KGN46897.1 (hypothetical protein Csa_020731 [Cucumis sativus])

HSP 1 Score: 69.7 bits (169), Expect = 1.1e-08
Identity = 35/69 (50.72%), Postives = 42/69 (60.87%), Query Frame = 0

Query: 2  DAEAVFNTHVVNRGVIPERSLVPSAQSQLDLAHSINERGWGRFTRHPEAAVVPIVREFYS 61
          DA   +   VV   VIPER L P    Q  L  +I +RGW  F + PE AV+ IVREFY+
Sbjct: 28 DAADRYRKLVVKSSVIPERGLAPCEVHQPQLFQNIMQRGWSDFVKQPEPAVLSIVREFYA 87

Query: 62 NMVEGSTTS 71
          NMVEGS+ S
Sbjct: 88 NMVEGSSRS 96

BLAST of Lcy05g018430 vs. NCBI nr
Match: EOY08849.1 (Uncharacterized protein TCM_024087 [Theobroma cacao])

HSP 1 Score: 54.7 bits (130), Expect = 3.8e-04
Identity = 24/65 (36.92%), Postives = 41/65 (63.08%), Query Frame = 0

Query: 1  MDAEAVFNTHVVNRGVIPERSLVPSAQSQLDLAHSINERGWGRFTRHPEAAVVPIVREFY 60
          ++A   ++T ++N+  IPER +        ++   I++R W +F   P+A VVP+VREFY
Sbjct: 22 VEAFTRYHTSLINQRPIPERGIEIPILPYKEINDMIHDRYWCQFCHQPDATVVPVVREFY 81

Query: 61 SNMVE 66
          +N+VE
Sbjct: 82 ANVVE 86

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5D3BBY31.3e-1053.62Putative S-locus lectin protein kinase family protein OS=Cucumis melo var. makuw... [more]
A0A0A0KER15.5e-0950.72Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G149380 PE=4 SV=1[more]
A0A0A0KNI11.0e-0747.83AA_kinase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G468460 P... [more]
A0A061F2U91.8e-0436.92Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_024087 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
KAA0033353.12.7e-1053.62putative S-locus lectin protein kinase family protein [Cucumis melo var. makuwa]... [more]
KGN46897.11.1e-0850.72hypothetical protein Csa_020731 [Cucumis sativus][more]
EOY08849.13.8e-0436.92Uncharacterized protein TCM_024087 [Theobroma cacao][more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lcy05g018430.1Lcy05g018430.1mRNA