Lcy05g018250 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy05g018250
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein
Location	Chr05: 35145956 .. 35147547 (+)
RNA-Seq Expression	Lcy05g018250
Synteny	Lcy05g018250

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGCTTTAATAACGGTTACGACCCGTTATTGTATGTTGGGCTTTAATAACAGTTTCGATCCTTTAAACGACGTTGTTTTGTTTGTTTTATTAAAAACTAAGGTCAAAACGACGTCGTTTTGTTTTCCGTTTAATTCATGGTAACGGTAAAGCAAACGATGGGCTTTAAAAACGGTTTGGGCCCTTTTTCTTTTAATTTCTTTTTTCCTTTAATAACGGTTTGGGCCCTAATTTTTTGTCTTCTTCCCCACGAACGTTTTCCTTCTCTACGATTTTGCCCTAAGTATACGATTTGGTATTTTCCTTTCCGTATTTACTTCTTCGCACGATTGATCTTGAACGGCTGATAGCGGACAGTGTTTAACGGTTGACGGCGGCGACTATTGAACTTGAAGGGCGGCGATTTCTACTCAGCGTTGGGTCTTCTTCTCCACGCCGTTTTTTCTTCTTGCTCGGGTGTTGAACGACGGCGAGCTGGTCGGTTTCTTCGTCCGCTCAGTTTGTTCCTTTCTGGGTTTTTTTTTTAAAAGGCCCCCCTCACTTTTGTCTCTCAGCGTGTGAACTCTGGTCAATTTTGGTTCCATTTAGAGCCTCTCTTTTTTTAAAAAAAAAATGGAATTCCTTTCTGGGTTTTCGAGGATACAAGAAAGCCCCACAAACCCACAACCTTGCAAAAGTTTTTTTCTATCTTCAGCACACAAACTGACTTATTTTGGAAGCATTATTCTCAATTTCTTATAAGTACTTTTACTCCAATAAACTTAGAAAATTAATTAGAGGTTTCATGATGAGGCTAAGAAGTTTGTGCAGTCCATCAAAAGTTGGTTGTAACGCATTCAAAAAGGAAAATTTTTTTCTTTGAAGGTTTTTTTTCATGAATATAGTTGAACTCTGGCTTTGATCGGTCAAGCCTCTCCCTAGTGGTTGTAGAGTGTTTTTTTAATGAACATTTGTTTAAGAGTTTAATAAACTTCCTTTTTTTCAATCATGGTCACACTAGTCACTTGACATGATTCTGGCCTTTCGGTTCAGAGATTGACTTCTCATCGGAGTGTCGCCGTGGGTATCGATTCAGGAGGCGGTAACTGCTGTTTTGGGCCGGAGTTCAGAGCAGACGAGGGTCTCCCTTGTAAGTAGCTCAATATCATGTGTGGTTGATCCAGAATTACTTTACAGTTTATATCAGTCACTTGTAAACTAGTGAACGAAAAATTTTCCTTTGCTCGATTATGATTCTTCAAGGATTCATTTTTCCTAGTGAATCTCTCATTTTTACCCATACTTACTGCATAAATTTTGTTGCTTCCCGTGAATTTTGTATTTGACATAAAGATGATTTGTGATGCATGCTTATTCTATAGTTGGAACTCCTGATTATATTGCTCTGGAAGGTTTGCTGAAGAAAGGATACGGAATGGAATGTGATTGGTTAGAATCTTTGTACTCTATTCGGTTTATTTTTATATTTCAAGAGAACCTTTCAATGACATTTTGCTACAACTACTTCAAGTGGTTACTTAGTGCCATCATGTATGTGGGATATATCCACCGTTTTATTCAGATGAGCCAATGTGAACTTGTAGGAAGGTGA

mRNA sequence

ATGGGCTTTAATAACGGTTACGACCCGTTATTGGCGGCGATTTCTACTCAGCGTTGGGTCTTCTTCTCCACGCCGTTTTTTCTTCTTGCTCGGGTGTTGAACGACGGCGAGCTGAGATTGACTTCTCATCGGAGTGTCGCCGTGGGTATCGATTCAGGAGGCGGTAACTGCTGTTTTGGGCCGGAGTTCAGAGCAGACGAGGGTCTCCCTTTTGGAACTCCTGATTATATTGCTCTGGAAGGTTTGCTGAAGAAAGGATACGGAATGGAATGTGATTGGTTAGAATCTTTGTACTCTATTCGGTTTATTTTTATATTTCAAGAGAACCTTTCAATGACATTTTGCTACAACTACTTCAAGTGGTTACTTAGTGCCATCATGTATGTGGGATATATCCACCGTTTTATTCAGATGAGCCAATGTGAACTTGTAGGAAGGTGA

Coding sequence (CDS)

ATGGGCTTTAATAACGGTTACGACCCGTTATTGGCGGCGATTTCTACTCAGCGTTGGGTCTTCTTCTCCACGCCGTTTTTTCTTCTTGCTCGGGTGTTGAACGACGGCGAGCTGAGATTGACTTCTCATCGGAGTGTCGCCGTGGGTATCGATTCAGGAGGCGGTAACTGCTGTTTTGGGCCGGAGTTCAGAGCAGACGAGGGTCTCCCTTTTGGAACTCCTGATTATATTGCTCTGGAAGGTTTGCTGAAGAAAGGATACGGAATGGAATGTGATTGGTTAGAATCTTTGTACTCTATTCGGTTTATTTTTATATTTCAAGAGAACCTTTCAATGACATTTTGCTACAACTACTTCAAGTGGTTACTTAGTGCCATCATGTATGTGGGATATATCCACCGTTTTATTCAGATGAGCCAATGTGAACTTGTAGGAAGGTGA

Protein sequence

MGFNNGYDPLLAAISTQRWVFFSTPFFLLARVLNDGELRLTSHRSVAVGIDSGGGNCCFGPEFRADEGLPFGTPDYIALEGLLKKGYGMECDWLESLYSIRFIFIFQENLSMTFCYNYFKWLLSAIMYVGYIHRFIQMSQCELVGR

Homology

[Close]

BLAST of Lcy05g018250 vs. ExPASy TrEMBL
Match: A0A453E751 (Uncharacterized protein OS=Aegilops tauschii subsp. strangulata OX=200361 PE=4 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 2.0e-05
Identity = 34/64 (53.12%), Postives = 40/64 (62.50%), Query Frame = 0


Query: 72  GTPDYIALEGLLKKGYGMECDWLESLYSIRFIFIFQ-ENLSMTFCYNYFKWLLSAIMY-- 131
           GTPDYIA E LLKKGYGMECDW      + F  +F   N+S+ F   + +W L AIMY  
Sbjct: 319 GTPDYIAPEVLLKKGYGMECDWYSMFRHLLFYLLFSLINVSLYFVLIH-RWSLGAIMYEM 378

[Close]

BLAST of Lcy05g018250 vs. ExPASy TrEMBL
Match: A0A4D9B5J5 (Uncharacterized protein OS=Salvia splendens OX=180675 GN=Saspl_024733 PE=4 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 4.5e-05
Identity = 36/66 (54.55%), Postives = 41/66 (62.12%), Query Frame = 0


Query: 72  GTPDYIALEGLLKKGYGMECDWLESLYSIRFIFIFQE---NLSMTFCYNYFKWLLSAIMY 131
           GTPDYIA E LLKKGYGMECDW   L SI F+F  Q     L ++  +   +W L AIMY
Sbjct: 321 GTPDYIAPEVLLKKGYGMECDWYVCL-SIVFLFFLQHLFFKLILSGKFVCGRWSLGAIMY 380

[Close]

BLAST of Lcy05g018250 vs. ExPASy TrEMBL
Match: A0A438IUZ4 (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=CK203_036957 PE=4 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 1.7e-04
Identity = 33/74 (44.59%), Postives = 43/74 (58.11%), Query Frame = 0


Query: 72  GTPDYIALEGLLKKGYGMECDWLESLYSIRFI-FIFQENLSMTFCYNYFKWLLSAIMY-- 131
           GTPDYIA E LLKKGYGMECDWL +L  +  +  +   NL +   Y   +W L  +    
Sbjct: 14  GTPDYIAPEVLLKKGYGMECDWLVNLTLLDALNLVIILNLQLDIAY---RWSLGQLCMRC 73

Query: 132 VGYIHRFIQMSQCE 143
           +  IH FI  +QC+
Sbjct: 74  LWDIHLFILRNQCQ 84

[Close]

BLAST of Lcy05g018250 vs. ExPASy TrEMBL
Match: A0A5B6X8W4 (Serine/threonine-protein kinase 38-like isoform X1 OS=Gossypium australe OX=47621 GN=EPI10_034002 PE=4 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 1.7e-04
Identity = 34/64 (53.12%), Postives = 39/64 (60.94%), Query Frame = 0


Query: 72  GTPDYIALEGLLKKGYGMECDWLESLYSIRFIF-IFQENLSMTFCYNYFKWLLSAIMY-- 131
           GTPDYIA E LLKKGYGMECDWL     + F+F +FQ  L         +W L AIMY  
Sbjct: 299 GTPDYIAPEVLLKKGYGMECDWL-----VIFLFCLFQSRL--------HRWSLGAIMYEM 349

[Close]

BLAST of Lcy05g018250 vs. ExPASy TrEMBL
Match: A0A4P1R211 (Uncharacterized protein OS=Lupinus angustifolius OX=3871 GN=TanjilG_26086 PE=4 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 5.0e-04
Identity = 31/63 (49.21%), Postives = 38/63 (60.32%), Query Frame = 0


Query: 72  GTPDYIALEGLLKKGYGMECDWLESLYSIRFIFIFQENLSMTFCYNYFKWLLSAIMY--- 131
           GTPDYIA E LLKKGY +ECDW     S+  +F+    ++   C +Y  W L AIMY   
Sbjct: 306 GTPDYIAPEVLLKKGYSVECDW-----SVDILFLVVVCMA---CVHYLLWSLGAIMYEML 360

[Close]

BLAST of Lcy05g018250 vs. NCBI nr
Match: XP_012848811.1 (PREDICTED: serine/threonine-protein kinase tricorner-like isoform X1 [Erythranthe guttata])

HSP 1 Score: 57.4 bits (137), Expect = 1.2e-04
Identity = 33/61 (54.10%), Postives = 39/61 (63.93%), Query Frame = 0


Query: 72  GTPDYIALEGLLKKGYGMECDWLESLYS--IRFIFI--FQENLSMTFCYNYFKWLLSAIM 129
           GTPDYIA E LLKKGYG+ECDWL S +   +RFI+I  F E L         +W L AI+
Sbjct: 315 GTPDYIAPEVLLKKGYGIECDWLVSSHRVLVRFIYIFCFYEELCC-------RWSLGAIL 368

[Close]

BLAST of Lcy05g018250 vs. NCBI nr
Match: KAA3490550.1 (serine/threonine-protein kinase 38-like isoform X1 [Gossypium australe])

HSP 1 Score: 55.8 bits (133), Expect = 3.5e-04
Identity = 34/64 (53.12%), Postives = 39/64 (60.94%), Query Frame = 0


Query: 72  GTPDYIALEGLLKKGYGMECDWLESLYSIRFIF-IFQENLSMTFCYNYFKWLLSAIMY-- 131
           GTPDYIA E LLKKGYGMECDWL     + F+F +FQ  L         +W L AIMY  
Sbjct: 299 GTPDYIAPEVLLKKGYGMECDWL-----VIFLFCLFQSRL--------HRWSLGAIMYEM 349

[Close]

BLAST of Lcy05g018250 vs. NCBI nr
Match: RVX00571.1 (hypothetical protein CK203_036957 [Vitis vinifera])

HSP 1 Score: 55.8 bits (133), Expect = 3.5e-04
Identity = 33/74 (44.59%), Postives = 43/74 (58.11%), Query Frame = 0


Query: 72  GTPDYIALEGLLKKGYGMECDWLESLYSIRFI-FIFQENLSMTFCYNYFKWLLSAIMY-- 131
           GTPDYIA E LLKKGYGMECDWL +L  +  +  +   NL +   Y   +W L  +    
Sbjct: 14  GTPDYIAPEVLLKKGYGMECDWLVNLTLLDALNLVIILNLQLDIAY---RWSLGQLCMRC 73

Query: 132 VGYIHRFIQMSQCE 143
           +  IH FI  +QC+
Sbjct: 74  LWDIHLFILRNQCQ 84

[Close]

BLAST of Lcy05g018250 vs. TAIR 10
Match: AT3G23310.1 (AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein )

HSP 1 Score: 49.3 bits (116), Expect = 3.1e-06
Identity = 28/55 (50.91%), Postives = 32/55 (58.18%), Query Frame = 0


Query: 72  GTPDYIALEGLLKKGYGMECDWLESLYSIRFIFI-----FQENLSMTFCYNYFKW 122
           GTPDYIA E LLKKGYGMECDW  SL +I +  +     F  +  MT C     W
Sbjct: 323 GTPDYIAPEVLLKKGYGMECDWW-SLGAIMYEMLVGFPPFYSDEPMTTCRKIVNW 376

[Close]

BLAST of Lcy05g018250 vs. TAIR 10
Match: AT4G14350.1 (AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein )

HSP 1 Score: 48.9 bits (115), Expect = 4.0e-06
Identity = 28/55 (50.91%), Postives = 32/55 (58.18%), Query Frame = 0


Query: 72  GTPDYIALEGLLKKGYGMECDWLESLYSIRFIFI-----FQENLSMTFCYNYFKW 122
           GTPDYIA E LLKKGYGMECDW  SL +I +  +     F  +  MT C     W
Sbjct: 320 GTPDYIAPEVLLKKGYGMECDWW-SLGAIMYEMLVGFPPFYSDDPMTTCRKIVNW 373

[Close]

BLAST of Lcy05g018250 vs. TAIR 10
Match: AT4G33080.1 (AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein )

HSP 1 Score: 48.9 bits (115), Expect = 4.0e-06
Identity = 20/22 (90.91%), Postives = 20/22 (90.91%), Query Frame = 0


Query: 72  GTPDYIALEGLLKKGYGMECDW 94
           GTPDYIA E LLKKGYGMECDW
Sbjct: 303 GTPDYIAPEVLLKKGYGMECDW 324

[Close]

BLAST of Lcy05g018250 vs. TAIR 10
Match: AT4G14350.2 (AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein )

HSP 1 Score: 48.9 bits (115), Expect = 4.0e-06
Identity = 28/55 (50.91%), Postives = 32/55 (58.18%), Query Frame = 0


Query: 72  GTPDYIALEGLLKKGYGMECDWLESLYSIRFIFI-----FQENLSMTFCYNYFKW 122
           GTPDYIA E LLKKGYGMECDW  SL +I +  +     F  +  MT C     W
Sbjct: 320 GTPDYIAPEVLLKKGYGMECDWW-SLGAIMYEMLVGFPPFYSDDPMTTCRKIVNW 373

[Close]

BLAST of Lcy05g018250 vs. TAIR 10
Match: AT4G33080.2 (AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein )

HSP 1 Score: 48.9 bits (115), Expect = 4.0e-06
Identity = 20/22 (90.91%), Postives = 20/22 (90.91%), Query Frame = 0


Query: 72  GTPDYIALEGLLKKGYGMECDW 94
           GTPDYIA E LLKKGYGMECDW
Sbjct: 303 GTPDYIAPEVLLKKGYGMECDW 324

The following BLAST results are available for this feature:

BLAST of Lcy05g018250 vs.


Match Name	E-value	Identity	Description

BLAST of Lcy05g018250 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A453E751	2.0e-05	53.13	Uncharacterized protein OS=Aegilops tauschii subsp. strangulata OX=200361 PE=4 S...	[more]
A0A4D9B5J5	4.5e-05	54.55	Uncharacterized protein OS=Salvia splendens OX=180675 GN=Saspl_024733 PE=4 SV=1	[more]
A0A438IUZ4	1.7e-04	44.59	Uncharacterized protein OS=Vitis vinifera OX=29760 GN=CK203_036957 PE=4 SV=1	[more]
A0A5B6X8W4	1.7e-04	53.13	Serine/threonine-protein kinase 38-like isoform X1 OS=Gossypium australe OX=4762...	[more]
A0A4P1R211	5.0e-04	49.21	Uncharacterized protein OS=Lupinus angustifolius OX=3871 GN=TanjilG_26086 PE=4 S...	[more]

BLAST of Lcy05g018250 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_012848811.1	1.2e-04	54.10	PREDICTED: serine/threonine-protein kinase tricorner-like isoform X1 [Erythranth...	[more]
KAA3490550.1	3.5e-04	53.13	serine/threonine-protein kinase 38-like isoform X1 [Gossypium australe]	[more]
RVX00571.1	3.5e-04	44.59	hypothetical protein CK203_036957 [Vitis vinifera]	[more]

BLAST of Lcy05g018250 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G23310.1	3.1e-06	50.91	AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein	[more]
AT4G14350.1	4.0e-06	50.91	AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein	[more]
AT4G33080.1	4.0e-06	90.91	AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein	[more]
AT4G14350.2	4.0e-06	50.91	AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein	[more]
AT4G33080.2	4.0e-06	90.91	AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein	[more]

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy05g018250.1	Lcy05g018250.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0016740	transferase activity