Lcy05g018230 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy05g018230
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	Calcium-binding EF-hand
Location	Chr05: 35122040 .. 35132979 (+)
RNA-Seq Expression	Lcy05g018230
Synteny	Lcy05g018230

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCGCATTTTGTATGCGTCGGCAGAGACCGTATCTGCTGACGCGTAAGCTGGGGAGTGATCATGGGCGATTTCTGCTGTCGCGTTGACTTCCGCATCGGTAGAGGCCATTTCTACCGACGCGGAGGTCAACGCGTCGGCAGAAAGTGATGGGCTCGATTTTCTGCCGACGCGTTGACTGTGCGTCACCAAAAATGGCCTCTGCCGATGCGAAAGTCAACGCGTCGGCAGAAAAGTTTGCAGGGGAAATTTCTGCCGATGCGTTGACTTACGCGTCGGCAGAAATGCCCTCTGCCGACGCCTGTCATATGGCGAAGGCAGAGCCTTTATTTATCTTTTTTTTTCGTTTTGCTATTTTTTCTGTTTTGAAAGTCTAAAAGAAATACATTTAAGATATTACACATATACATAAAATCAAAATGCATTCAATTAAAATCAAAAAGTTAATTACACATATACATGAAAGTCGAGAGATATAAAATCTTGCATTATAAATTTAAGTACAGAAAACTAAAGTGATAAAAAATACACGAAATTAAAAGTATTGTTCGTTACACATAATTCTAATAAGAAGTTAGAAGCGAAAGTCTTAAGTTACAGAAAAAGCATCTAACAAGCTCGTGGCGGCCTCCAAACGATATAATGCAGATGTGTCCTTCCATATCAAGGTTGAGTCGAATCATCTACAAAAAGTCAAAGGAAGAAAATTAATTTACACTCATTGAAATTTAAACCATCCAAGAAGCTAGAAACGAAAGTCTTAAGTTAAAAAGGAACGATTATGTTAATCTTTTGAGCATACACTCAATTCCTAATATACTAAATACAACTTGAAACTAAGTTTTACACTGATACTAAATCCAACTCTTGAAACTAAGTCTAAATTATTAACTAGATGCTTTGAAAAATTCGGCAGCATAACGGCATAGATAAGACTAACCCATATTTTTTTAGACCTGCTAAACAAGAGAAATGCATTTAAATATAGCTAGAAACACTCAACTACAGCCCTCATAACACCTAGGCAACACCACAATCTCCAAATACAAGCGAGTCAGATCTCGCATAACACAGTAATCCAAATCTTAACTAATGAAGTTAAGATTTAACTAATCAAGTTACAAAACTATACAAGCAAAACACCAAATTTAAGAAAAACAACCAAGTTGATCTAACTTTATTAAGTAAAACAAAGTTACAAAACGGTAAGTAACTTTTCCTAACCAAAAACACAAACATTTACATTTACCAAAAATTTAACTTATAGACATCTAATACTAATGTAGTATATATATACCAACTAAATCATCTAACTTATAACTAATTATAAAGAATTAAAACAATCCAACCTTAAACTTAGAAGTTATATCATGTTCACAATTAAACTCATTGAAACCTAACAAAAAAACAAAAACAATCAAAACTTTAAACTAACTTCCAAAGTTACACAATCCATATTAACATAATGAACTAAAACAATCAAAACAACAAACATTAATCTGATTTACTAAGTAAACAAATATTAAACTCCTCGAACCATAATAAACTCATCAAACTATAACAACACTACAAGAAAATGAGGTTTTGCCGACGCCAAAAACGCGTCGAGAAAAGCAAAAAACGCATTGGAAAACCTAAAAAAAAAGAAATATTAGTTAAGTTCAATATATACTAAGTCAATAAATTTTCAACTTAATGAACATAATATGAAAACATAACTCAATTATCAATTTTTCAAAACTTAGGAACATAGTATCAAATTTTTAACTAAAACATTTCAAAACATAACACAATCATGAAAATGAATTCTTACTTTTCTACATCTCTTACCACACATCATCCAACAAAAACAATCTCAATATCATACAAGCATAAATTAAATCTCAAACTCCAAACTCCAACAAACAACTATAATCTCAACATTTATAAACCAAATTTATAAGTAAACACTAAAATAAAGAGAAGAAACAACTTACAAGGGCACTATGAGCTCGTCCATATGACATTTTATTGGATGGAAGATAACCTACAGAGAGGGAAATTCGCAAACATCAAGTAAGTTCATTTTTGTCAACTTTCTCACAACAACAAACTACAATACTTTAAAAATAAAAGGCTAAATTATAAGAAATACCCCTAAACTATGGGGTTTGTTTCAAAAATGCCCCTGAACTTTAAAAAGTTTCAAAAATACCCCTGAACTTTGAAAAATGTTTCAAAAATACCCTTGTCGTTAATTTTGGATGGAAACCGTTAAAGTTTTAGTTTCAAAAATACCCTTGAACTTTCAAAAAAAAATTCAAAAATACCCTTATTGAAAAATATTTCTTCTTTTTTCCTCCTCTCACCGTACATTCTTTCTTCATGAAAACTAATGCAAAACTTTACTTATAAAGGTTGTGTGCAACACAATACCAGATAAAAACAGACTTTGAAATCGAGTTTTCTCTTTTAAAAAGCGTAAATAAGAAAAGTGTGAGAAAACAACATATATATGTATATATATTATTTTCTTTTTGATTCCTAAAAAAAATTATTTCCTTTTTCCTCCCATTGTTTGTGTATGTTAGTGATAAGAAGAAGTTTATAAGACTGTGGATTTGGTCCAATTTATAAGATTAATTAATCAAAAGTTTTATATATGATTTTGTTATTATTGATATTTAAGAATTGTTAGAACTCGTATACAACAATAGTTTCATTTATTTTTCATAGCATGAATATAATAAAGAAAGTTAATGGGTAATAGTTGGTGAGAAAATAATATTGAAAAGGCTACCAACAAATGAAGTCAAGCACATGTAGAATTTCAAGAACAAAACAAAAGTCATCTTGAAGTTTCGATACGAAAATCTTGCCAAGTTCTTGGGACGTGTTGAAACAGAAAAAAAACTTCTAGATTATGAATACATGATAAATAAGTAAAATTTCTCATTATTTTTCATAAAAAAGAATTAATTTACAGTGGGAGAAGGAAAAAAAAACACATTTTTGAATAAGGGTATTTTTGAATTTTTTTTTTAAAGTTCAAGGGTATTTTTGAAACTAAAACTTTAATGGTTTTCATCCAAAATTAACGGTAAGGGTATTTTTGAAACGTTTTTCAAAGTTTAGGGGCATTTTTGAAACTTTTTAAAGTTCAGGGGCATTTTTGAAACAAACCCCATAGTTTAAGGGGTTAAAATGAGGAAGAAGACACGAAATGAGAGGAAATTTTGATTAGGGCTTTTAATGAGTTTTTGCTGACGCAGTTAAAATGGCGTCGGTAGAGGCTATACTTCTGCCGACGCGGTTTTAACCGCGTCGACAGAAATCACTTCTGCCGACGCCATATGAAAACGGCGTCGGCAAAAATCCAAGTTTGGAGGGAAAAAATTTTGGCTGTGAATTTTTAAATGACTTTCTGTCGACGCCATTTTAACCGCGTCGGTAGAAGTGTCTTCTACCGACGCCATTTGAAAACGGCGTCGACAGAAGTCCAAGTTTGGAGGGAAAAAAAATTTACCATCGAAATTTTAAATGAATCTCTGCCGATGCCTTCTAGGCGCGTCGGCAGAGGTCACTTCTGCCGATCGATGAACACAGCGTCGACAAAAGTCTTGCCGCTCTCGACGCAAATATAAACGACGTCGAGAGTGGAGGCCTCTGCCGACGTGGTCTTAACGACGTCGGCAGAGATGGTTTGCTCGTCGGCAGAAGGTCCGCATTTAACGGCGTCAAGAGAAAACACGTCGGCAAAAACAATTTTTCTTGTAGTGAAGAGAGGGAAGCTTAGTCCAAGGTTTATTGGACCTTTTGAGATTTTGGAAAATGTGGGTGTAGTGGCATATCGCTTGGCCTTACCACCTGCCTTGGATCGAATTCACAATACTTTCCATGTTTCCATGCTTCGAAAGTATATTGTAGATGCATCCCATGTGTTAAGTTATGAACCACTCCATGTGAAGGAAGATTTGACTTATGAGGAGGCTACAGTTCAAATCCTGGACAGAAAAGATCGAGTTTTGCACAACAAGACTATCCCTCTTGTGAAGGTTTTATGGAAGAACCAATTCTTTGAAGAAGCTACTTGGGAGACTGAAAAGGACATGAGGAAAAGATATCCGAGTTTATTCTCTTATGCAAGGTATGTGAATTTCGAGGACAAAATTCTTATTAGGTAGGGTGTTTGTAACAGTCAGATCCTTTTTTTAAAAAAAAAATAAAGGATTTTATTTTTTCTAATTTTTTTTAATGTTTTCCAAAAATCTTTTTGGAATATGATTTTATCTTTTTTTTAAGAGATAAATATCTGGTATTTTGTTTTGTTTTTTTAAAAAAAAGGGAAAATGATGTTTTAGGTTTTAAATTAGGGTTCTTTTAAAAGACCATTTTCAATAGCCCTAAATTTGTTTTTACGCTCTGAGTCAAAGAAAAAAAGGAGAAGAGGATCACGTTTTGCACTTTCCCTTTCTAGTGAAAAAAACAGTAAGTTTTTCTTCCCTTCTATGCTTTTCTTTCGTTGTCTTTTTTTTTTTTTTTTCAATTGAATCTTGTTTTGAAAAGCTTTTTGTATTAGTTCTTTATTTGTACTCTAATTGATTGGATTGGGATGAAATTGGTTTTCAAACCTTTTGCCCTAAAAAGTTTTAGGTTTTTGTTTTGGCCTACATTTTAATCGAAGTTTTTCCTCTTAGGCCTTTTGGTTTAAATTCAAGATTTGATAAAAAGAAAAAATTTCCAGAATTTTCCTGTGACGCCTCGTATTTCGAAATTATGTCATTTTGGATTAATCGGGTTTGAATTCTAATTTGGGGGAAAATAGAATTTAACTTTAGCCTTTAATCGATATTTTGGAAATTTAAATTGAGATGTTTTTATTTCTTTCCATAAGTGGCTGAGTAGTGGGATTCGGTTAAAAATTTGGGAAGTTACGTGGAAATGAGTGATAGGACCTAAATAGTCCTATTTTATCGCCTCTAATTTAAGCTTGTTAGAGTCATTTTATGCTTAACTTGTCCTATTTACAGGTTAATTGAGCTTAGGTCGTGTTGGGAGCCAATCACGCTAATTGGTGTTAATTTGGACCAATTAAGGAGTTTTTGGAGCCATCTCGATGTCTTGGACGGCGAGGAGGTGAAGAGACCCAATTGTGCTGAAGCGGGCCTGAAGATTAACACTGAAAGCCAAAGATTGAAGCCCCGAACCGAGAAGAAGCGAGACCAAGCTGAGAAATTGAGCAGCAAGTTGGGATATGAGGCTGGCGTCTCGACGCCGACACGATTTCAAGCTGAAGTGTTATGTACGCAGCGTCGAGACACTGCACCTTGGCATCTCAACGCCGGCGTGATTTCTATATATATGTAGTCTCAGTTTAGTCCGTCGTTAAGTTAGAATTTTGGTCCCTTTTACGATTTCTTTGCCTTTTTTACTTTCCAGCACTCTTGTAGGCCATTGTTGGCCATATTCTATGGATTCCTCTATGTTATTTGTTGCTTTTACTTCATCTATGTGTAGCTAAACCCGTTTAGATCATTGGATTGGATTTATGTCTTGATTCTAAATAATATTGGCTGAGTTTCTGGTTTTAACTTTCTGTTCTTGCTGAGTTTTTGTTAAGTTTTGCATGTTATCCCGTTTAAACCAATACATGAGGCTAGTCAATTAGGATTGACGCCCTATGCGATTACCGCTTGTGTATTCTATCAGTTATTTTTAGATAGCCACTAGGTTGAGGCAAGCCACTCTCTACACGAGACGACCCTTGATAGGCCTAGGATGCATGTTAAAGGTTGTAGGAATTAGATTTAAATTGCATTTGAATTTAGTTCTTATGATTCCGGACCCACGATCCCAAAGCGGCTAGTTTTAATAATTGGTTGTAAAATTGCTTGTTAATAAATTAGTTAGATATAAGTAGTAACCGTTGCAGAGGTCTCGGATGGTTGCTACATTATGCATGAGGGGTGGCGAGCGATAGAGTCTATATTAATTAATCTTGTTAATTGTCGAATTCACGATTAACGAGTTAATTAGCACAAGTTAGTGTAGGGGGGTCCTCCGAGTAACCTAGAAGCCGACCGGACTAATAAAATCAGTTTAGAACGATTATTAGAGAAACCTAGGAAGCCAATGAATTAGAATCAAGCATAATAAATCCCAATCTAACGATCTGCTTTTTATGTTATTAACCCCGTCTTATTTCCATTCTGCATGCTTAGCTTCCTGTCTTTTAAAATTCTGCATTTATATTATTTAATTTTTGCTTGTCTTCAATCACAAAAATCCCCCCTGTTTTCATAAGCACGAAATTCTACACTTGCTAGATCCCCTTCCCTGTGTTCGACCCCGGCCGCTATTGCTACAAAATTAGTAGTAGTGCCGTGGATTGTAAATTTTATTTGGCTCGGACCTTCGACAAGTCCCGTCAATGAGTTGTGCGTTTTTTCTGCGAAGTTGGCGTTGGAAGTTATTGGAATTAAGAGAATTAAGAAAAAAAAGAAAAGAAAAGAGGAACAGAACCCAACAAGCCCTAACATCATATTCTCTCTCATCTCTCTCTCCCCCTTCCTTTCTTTCCCCCACGCATAGCCAGCAACCCCTCCCCCTCCTTTTTTCGATTTTTCTTCTTCTTGCATCACCGCCGTCTCTCTCGTCGCCGTTCTCATCACATCGCGCCGCCCTCTTTCCCTCTCAGTTCGTTTTGCCACCAGCAAACCCACGAAACCCACGTCACGAATCCTCTCCCTTGCATTTTCTCTCATCACCGGCGTTTCTTCCTCTCAACATTCGCGTCTTCGACCGGTGAAAACCCCCTCCCTTTCGTTTTCTTCTTCTCGCCACAATACCCATGTGTTTGCAGCAACGCTACACGTGTTCAACGTCGTTATTTTGCTTTCGCTTGGCTCCAATCCATGGGTTTCCGACTCCATCAAAGCATTTCGACATTTTCTGTAAGGTTAGCCTCGACCCACTTGATTTTCTTCAAGTTTCAGCATTTACCCAGTTGATTTTAGACTCTAAATTATGTCTAAATCGTGATCCATGCATAATCGACTTTGAAACTGATTTACCCAATCCTTATCGACTCTGAATTTTAGGTTTAAGCCTTCTTCGAGTGCTAACCAGTGAGTTTGGGCTTGGAATTGGCTTACGGCGATTACCCACAACCCGAACTGTTAGGGTTGTTGCCCTAAAACTCGTAGATAGTGAATGTAAACAAATAATATACTTGTTCGATAAAATCGTTATCGAGGCTTTTTTCATTTAAGTTGTTAAAATAAGTGAATTGCACGTTATAATAACCCAAATCCAATAAACTAAGATTTCTGTCTATATAATGTATACTTGAGCTTTATGTAGAGACATAAAAGTGGATCAGGCTCAAGTAATAGCCAAAACGGTCTATAATATAGGGATAGGGTTGAGTACCTTATCCTGGGGACACTATGTGACGCGACCCACTTTGTAGTTAGTACAGACGATGTGATCCTGAATCGTCCATGTGGAGACATGCGAGTGGGGGCATCCTATGCAATGAGTTTGCATAAGACCACAACCGAGAAATAAGTCACTCTCACTTTGTAACGCGGTTTACTGTTGAGACTGGCTATTTCATGCGATGACTTAGGTAACTCGATCTTAATCCTAAGCTAACTATGAACTCCTATTTATTCGGGATTATCCTTTGATTTGCATGGGTGAGAGTGCCTCATCATCGCGGGCTCAATAAGTCTACCACTTTGGGGATAAGACCGGGTAGATAGTTGGGTACATAGTCTTGCAAGATGAAATTCACTCCTACTCGAATTAGGGATAGCTAGAGAGGTTGTTCCCTTAAGTCCTGACTCCGGGGCTTGAACATAGGGATCCCGCCCTACTCGAATTAGGAATTCTAATTTTCAAAATAGCACCACACTCTCAATCAAAGACATAGTTTCATACTCACTGACGTGTGCGTGTTGCTGATGCAACACCTGTTCGAGTGCAAGTATACACTATCAAGTAATAAAGTGGAAAGTATTCCGGATATCGTACCCAAGGGAGATAGTGACTAGTTAAGTTTACACACAATTCTGTAAAATATGAACCACCTCTAAATTTACAACCACAATTGGTAACCAAATGAAAATAGATAATTGGGTTTTTGGTTTTAAAACAAAAGGAAAAAGATAATAAGGAAAATAGGAGAAAACTCAATGAGATAAGTAGAAAATTCAAATAGCTTCAACCTTGAGTAATAGATAGCCTCCACCTATGCACCCGCAATTTGCTCAGGTCTTGCAAACGGCTGAGCCACACTATTTATGTTGCCCACATAGACATGGTGCAGATAGCATAACTCAGTTTGTGCCCGCAATCCCTTGACAACCAGACTGTGAGTTAAGCCCAGCTCTGCTGTAGATGCCTTTAGAAGACTAGGCCAGCTAGAGACCTATTTCTAGGTCTGGCTGAAACTTAGATGAATACTACTCACGACTCTTCAAACTCTAGTGGTTAAAGTCCTATTTCTAGGATGCAAGAAGTCAAAGTCCTATTTCTAGGATCTTTTCCACTATTGCTTTGCGAACCCACGCCTTTAACTCCAACCTTTCGGCAATCAGTTAAATGCAAACTATGCTAACCTAAGTGATCAATTTAAGCTAACATTTAAACCTTACTTTCAACAAAGACAAACAATGCTAGAGGAAGCAAGGTTTCTTTGACATAGGCAGGGCTTACTTCTATTCAAGAATCCACATATTTGAACCCCTAAATAGAAGCTTAGCTCATGATAGAAAATAAATTGCAAAACATAATGAAAGACAAACTTGACATGGAGAAAAACGATGAAATATTATTAAAGAATGAACTGAATTCAAAAGTTTAACTTGCAACCAATAGTTAAATGATAAATGAAAACAATTTGCTGAAAACAAAAGAATACAAAGCTTAAACTAAAGGCAAGACTCAACTAAGGATCTCTCTCTATCTAGCTAGCTCTTTACCTTTTTTTCAAGGAGAGACAAGTCTTTCTCTTCTTCTTCTTTCGAATAAAAGAGCCGACAGAGACTAAGGGATCCGAAACTCGGAGTGGTTACAAGGTGAGAGGAGAGAAACTGAAAATAAAATCCTAAGGGCGAAAACTCCCAAGCACCGAGCTCTTTTTTCTTCTTGTACCTTGGTCCCCTTTTATAGACCATGGAAGGTAAGGTTGGCTGTCGAGATCAGTGTGAGAAATCTTTAGAAGGAAAGAATCCACGATCCTTGGAGATTTGATACCGGATTGAGGGATATTCAGATGATTCTGTGCAAATCCCACGAATCTCAGAATTCTGTCAAAAAGCCCAGTTGCGACCGCATCTCAGGCGCAATTTACTCTGTGTTCTGCTTTGACAATTATATCTTCAGCAAAGGGCTTATTTCCTAAAATGGCTTTGCGGGCACAACTTGATCGCATTCACCACATCCTCAGGTCCAGATGCCGGCGAAATCTTGCAACTTTTAATTCCCTTTGCTCTGCTAACCTTTATCTCCTCTTGCGGGCGCATTCTCCTCGCAAAGATTCCTGCACAAAAACATTATTTGGATAAATTCTTTACAAAATAATCTCTTTTTGTTCAAAATAAGCTTAAATTCTATAATTCTAAGATTTTCTTCATGCTTCTACCACTTTTGCTAAAAAGACTTAAAATGATAAGATTTTAGGTATAAAGTCCTTGCTTTCCAAACAATTACTTAAGCTTTTAGGGCTAAATGACGCACATAAATGAGCATTGCCACTCACCCAACCTCCTTTTCTTGGTCAAAATAACCTTGAGGAGCTTTCCATATTTGGGCATTTGCTCCAAGGCCTCAACTAGTGGTATATTAATGTGAAGTTGTTTCAAAACCTTAAGGAATTTCTTAAATTGAGCCTCTTGATTTTTTTTTCTTTGGGAAATTGTAATGGATAGCAAAAAATATTAGGACATTTGCAAATTTAGCTATGCTTTTTGAGTTTGCAAATATAGCAAAAATTTTAAAATTTGATTTTCGCTTTTTTTATTATTCCAGTTTTACTCTTGTTGGTATATCAACTGATATATTAGTAGTATATCAGACGATATACTTTATATTTATTGATATATGAGATATAAAGTAGGGAAAATACACTTTTGGTCCTTGAGGTTTGGGTTAAGTGACACTTAGGTCCCTGAGTTTTCAAACTCAACAAAAATACCCCTGAGGTTTGAGATAAGAAGCACTTTGGTCCCTGTCGTCAACTTTTCTGTTAAATTTTAACTGTTGCTGACGTGGCACTATTATTTTAATAAAAAAATTATTAAAATAATAAAATAATATTACTTTTATTATTATTTATTATTTCTCCCTCTCTCTCTTCTTCTTCTTCTTTTACTCCATCTTCTTTCTCTTCATCCTCTTCCTCCTTCTTCTTCTTCCTATCTCCGGCGGCCGGCAGCCACTGCTCGCCGCCGCCGCCGGCGACTTTTTTTTTTTTTTTCTTCTTCTCTTCTTTTTCTTCCTTAAAAAAAAGAAGAAGAAGACAGAGAACAGGGAGGGAGTCCTCCGTCTCCGGTGCCGGTGAAGAACTTCGTGAACGAAGAATCTCACTTCAAGAAAAGCGTCAACGAAGCCTTCGTCGCTCTGGATCTCAACCACGATGGCGTCCTCTCCAAGTCGAAGCTCCGCAAGGCCTTCGAGACGCTCCGCCTAATCGAGACTCACTTCGGCGTCGACGTCACCACTCTGCGGGAGCAACTCACTCAGCTCTACGATTCCATCTTCGAGAAGTTCGATTGCGACAAAAGCGGCACCGTCGATACGGAGGAGTTTCGGATGGAGATGAAGAACATCTTGCTCGCCATCGCCGAAGGATTAGGCTCCTCGCCGATTCAGATGGCGCTCCATGACGGCGATCAGAGTTTCCTCAAGCAGGCGGCGGATCTGGAGGCTTCCAAACTCGCTCAATCGTCTACCTGA

mRNA sequence

ATGCGCATTTTGTATGCGTCGGCAGAGACCGCGCGTCGGCAGAGGTCACTTCTGCCGATCGATGAACACAGCGTCGACAAAAGTCTTGCCGCTCTCGACGCAAATATAAACGACGTCGAGAGTGGAGGCCTCTGCCGACGTGGTCTTAACGACGTCGGCAGAGATGCAACGCTACACGTGTTCAACGTCGTTATTTTGCTTTCGCTTGGCTCCAATCCATGGGTTTCCGACTCCATCAAAGCATTTCGACATTTTCTCGTCAACGAAGCCTTCGTCGCTCTGGATCTCAACCACGATGGCGTCCTCTCCAAGTCGAAGCTCCGCAAGGCCTTCGAGACGCTCCGCCTAATCGAGACTCACTTCGGCGTCGACGTCACCACTCTGCGGGAGCAACTCACTCAGCTCTACGATTCCATCTTCGAGAAGTTCGATTGCGACAAAAGCGGCACCGTCGATACGGAGGAGTTTCGGATGGAGATGAAGAACATCTTGCTCGCCATCGCCGAAGGATTAGGCTCCTCGCCGATTCAGATGGCGCTCCATGACGGCGATCAGAGTTTCCTCAAGCAGGCGGCGGATCTGGAGGCTTCCAAACTCGCTCAATCGTCTACCTGA

Coding sequence (CDS)

ATGCGCATTTTGTATGCGTCGGCAGAGACCGCGCGTCGGCAGAGGTCACTTCTGCCGATCGATGAACACAGCGTCGACAAAAGTCTTGCCGCTCTCGACGCAAATATAAACGACGTCGAGAGTGGAGGCCTCTGCCGACGTGGTCTTAACGACGTCGGCAGAGATGCAACGCTACACGTGTTCAACGTCGTTATTTTGCTTTCGCTTGGCTCCAATCCATGGGTTTCCGACTCCATCAAAGCATTTCGACATTTTCTCGTCAACGAAGCCTTCGTCGCTCTGGATCTCAACCACGATGGCGTCCTCTCCAAGTCGAAGCTCCGCAAGGCCTTCGAGACGCTCCGCCTAATCGAGACTCACTTCGGCGTCGACGTCACCACTCTGCGGGAGCAACTCACTCAGCTCTACGATTCCATCTTCGAGAAGTTCGATTGCGACAAAAGCGGCACCGTCGATACGGAGGAGTTTCGGATGGAGATGAAGAACATCTTGCTCGCCATCGCCGAAGGATTAGGCTCCTCGCCGATTCAGATGGCGCTCCATGACGGCGATCAGAGTTTCCTCAAGCAGGCGGCGGATCTGGAGGCTTCCAAACTCGCTCAATCGTCTACCTGA

Protein sequence

MRILYASAETARRQRSLLPIDEHSVDKSLAALDANINDVESGGLCRRGLNDVGRDATLHVFNVVILLSLGSNPWVSDSIKAFRHFLVNEAFVALDLNHDGVLSKSKLRKAFETLRLIETHFGVDVTTLREQLTQLYDSIFEKFDCDKSGTVDTEEFRMEMKNILLAIAEGLGSSPIQMALHDGDQSFLKQAADLEASKLAQSST

Homology

[Close]

BLAST of Lcy05g018230 vs. ExPASy TrEMBL
Match: A0A6J1F6Q4 (uncharacterized protein LOC111441377 OS=Cucurbita moschata OX=3662 GN=LOC111441377 PE=4 SV=1)

HSP 1 Score: 201.8 bits (512), Expect = 2.7e-48
Identity = 104/117 (88.89%), Postives = 110/117 (94.02%), Query Frame = 0


Query: 87  VNEAFVALDLNHDGVLSKSKLRKAFETLRLIETHFGVDVTTLREQLTQLYDSIFEKFDCD 146
           V+EAF ALDLN+DGVLS+S+LRKAFETLRLIETHFGVDV T  E+LTQLYDSIFEKFDCD
Sbjct: 25  VDEAFAALDLNNDGVLSRSELRKAFETLRLIETHFGVDVVTPPEKLTQLYDSIFEKFDCD 84

Query: 147 KSGTVDTEEFRMEMKNILLAIAEGLGSSPIQMALHDGDQSFLKQAADLEASKLAQSS 204
           KSGTVD EEFR EMKNILLAIA+GLGSSPIQMAL DGDQSFLKQAADLEASKLAQSS
Sbjct: 85  KSGTVDAEEFRTEMKNILLAIADGLGSSPIQMALDDGDQSFLKQAADLEASKLAQSS 141

[Close]

BLAST of Lcy05g018230 vs. ExPASy TrEMBL
Match: A0A6J1J7W5 (uncharacterized protein LOC111482160 OS=Cucurbita maxima OX=3661 GN=LOC111482160 PE=4 SV=1)

HSP 1 Score: 200.3 bits (508), Expect = 7.8e-48
Identity = 103/117 (88.03%), Postives = 110/117 (94.02%), Query Frame = 0


Query: 87  VNEAFVALDLNHDGVLSKSKLRKAFETLRLIETHFGVDVTTLREQLTQLYDSIFEKFDCD 146
           V+EAF ALDLN+DGVLS+S+LRKAFETLRLIETHFGVDV T  E+LTQLYDSIFE+FDCD
Sbjct: 25  VDEAFAALDLNNDGVLSRSELRKAFETLRLIETHFGVDVVTPPEKLTQLYDSIFEQFDCD 84

Query: 147 KSGTVDTEEFRMEMKNILLAIAEGLGSSPIQMALHDGDQSFLKQAADLEASKLAQSS 204
           KSGTVD EEFR EMKNILLAIA+GLGSSPIQMAL DGDQSFLKQAADLEASKLAQSS
Sbjct: 85  KSGTVDAEEFRTEMKNILLAIADGLGSSPIQMALDDGDQSFLKQAADLEASKLAQSS 141

[Close]

BLAST of Lcy05g018230 vs. ExPASy TrEMBL
Match: A0A0A0L9X6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G706670 PE=4 SV=1)

HSP 1 Score: 199.9 bits (507), Expect = 1.0e-47
Identity = 101/118 (85.59%), Postives = 110/118 (93.22%), Query Frame = 0


Query: 87  VNEAFVALDLNHDGVLSKSKLRKAFETLRLIETHFGVDVTTLREQLTQLYDSIFEKFDCD 146
           +++AF +LDLN+DGVLS+S+LRKAFETLRLIETHFGVDV T  EQLTQLYDSIFE+FDCD
Sbjct: 25  IDDAFASLDLNNDGVLSRSELRKAFETLRLIETHFGVDVATTPEQLTQLYDSIFEQFDCD 84

Query: 147 KSGTVDTEEFRMEMKNILLAIAEGLGSSPIQMALHDGDQSFLKQAADLEASKLAQSST 205
           KSGTVD EEFR EMKNILLAIA+GLGSSPIQMAL DGDQSFLKQAADLEASKL QSST
Sbjct: 85  KSGTVDAEEFRTEMKNILLAIADGLGSSPIQMALDDGDQSFLKQAADLEASKLRQSST 142

[Close]

BLAST of Lcy05g018230 vs. ExPASy TrEMBL
Match: A0A5A7UE76 (Calcium-binding EF-hand OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold148G00320 PE=4 SV=1)

HSP 1 Score: 198.7 bits (504), Expect = 2.3e-47
Identity = 100/118 (84.75%), Postives = 110/118 (93.22%), Query Frame = 0


Query: 87  VNEAFVALDLNHDGVLSKSKLRKAFETLRLIETHFGVDVTTLREQLTQLYDSIFEKFDCD 146
           +++AF +LDLN+DGVLS+S+LRKAFETLRLIETHFGVDV T  EQLTQLYDSIFE+FDCD
Sbjct: 25  IDDAFASLDLNNDGVLSRSELRKAFETLRLIETHFGVDVATTPEQLTQLYDSIFEQFDCD 84

Query: 147 KSGTVDTEEFRMEMKNILLAIAEGLGSSPIQMALHDGDQSFLKQAADLEASKLAQSST 205
           KSGTVD EEFR EMKNILLAIA+GLGSSPIQMAL DGD+SFLKQAADLEASKL QSST
Sbjct: 85  KSGTVDAEEFRTEMKNILLAIADGLGSSPIQMALDDGDRSFLKQAADLEASKLGQSST 142

[Close]

BLAST of Lcy05g018230 vs. ExPASy TrEMBL
Match: A0A1S3CGR2 (uncharacterized protein LOC103500282 OS=Cucumis melo OX=3656 GN=LOC103500282 PE=4 SV=1)

HSP 1 Score: 198.7 bits (504), Expect = 2.3e-47
Identity = 100/118 (84.75%), Postives = 110/118 (93.22%), Query Frame = 0


Query: 87  VNEAFVALDLNHDGVLSKSKLRKAFETLRLIETHFGVDVTTLREQLTQLYDSIFEKFDCD 146
           +++AF +LDLN+DGVLS+S+LRKAFETLRLIETHFGVDV T  EQLTQLYDSIFE+FDCD
Sbjct: 25  IDDAFASLDLNNDGVLSRSELRKAFETLRLIETHFGVDVATTPEQLTQLYDSIFEQFDCD 84

Query: 147 KSGTVDTEEFRMEMKNILLAIAEGLGSSPIQMALHDGDQSFLKQAADLEASKLAQSST 205
           KSGTVD EEFR EMKNILLAIA+GLGSSPIQMAL DGD+SFLKQAADLEASKL QSST
Sbjct: 85  KSGTVDAEEFRTEMKNILLAIADGLGSSPIQMALDDGDRSFLKQAADLEASKLGQSST 142

[Close]

BLAST of Lcy05g018230 vs. NCBI nr
Match: XP_038905172.1 (uncharacterized protein LOC120091281 [Benincasa hispida])

HSP 1 Score: 204.9 bits (520), Expect = 6.6e-49
Identity = 104/118 (88.14%), Postives = 112/118 (94.92%), Query Frame = 0


Query: 87  VNEAFVALDLNHDGVLSKSKLRKAFETLRLIETHFGVDVTTLREQLTQLYDSIFEKFDCD 146
           ++EAF ALDLN+DGVLS+S+LRKAFETLRLIETHFGVDVTT  EQLTQLYDSIFE+FDCD
Sbjct: 25  IDEAFAALDLNNDGVLSRSELRKAFETLRLIETHFGVDVTTTPEQLTQLYDSIFEQFDCD 84

Query: 147 KSGTVDTEEFRMEMKNILLAIAEGLGSSPIQMALHDGDQSFLKQAADLEASKLAQSST 205
           KSGTVD +EFR EMKNILLAIA+GLGSSPIQMAL DGDQSFLKQAADLEASKLAQSST
Sbjct: 85  KSGTVDADEFRTEMKNILLAIADGLGSSPIQMALDDGDQSFLKQAADLEASKLAQSST 142

[Close]

BLAST of Lcy05g018230 vs. NCBI nr
Match: KAE8650949.1 (hypothetical protein Csa_002692 [Cucumis sativus])

HSP 1 Score: 203.0 bits (515), Expect = 2.5e-48
Identity = 111/156 (71.15%), Postives = 125/156 (80.13%), Query Frame = 0


Query: 57  TLHVFN------VVILLSLGSNPWVSDSIKAFRHF--LVNEAFVALDLNHDGVLSKSKLR 116
           T+H+ N      VV+L       +V+D      HF   +++AF +LDLN+DGVLS+S+LR
Sbjct: 54  TIHIINPPTHMAVVVLDGSTVRNFVNDE----SHFNKSIDDAFASLDLNNDGVLSRSELR 113

Query: 117 KAFETLRLIETHFGVDVTTLREQLTQLYDSIFEKFDCDKSGTVDTEEFRMEMKNILLAIA 176
           KAFETLRLIETHFGVDV T  EQLTQLYDSIFE+FDCDKSGTVD EEFR EMKNILLAIA
Sbjct: 114 KAFETLRLIETHFGVDVATTPEQLTQLYDSIFEQFDCDKSGTVDAEEFRTEMKNILLAIA 173

Query: 177 EGLGSSPIQMALHDGDQSFLKQAADLEASKLAQSST 205
           +GLGSSPIQMAL DGDQSFLKQAADLEASKL QSST
Sbjct: 174 DGLGSSPIQMALDDGDQSFLKQAADLEASKLRQSST 205

[Close]

BLAST of Lcy05g018230 vs. NCBI nr
Match: KAG7018108.1 (hypothetical protein SDJN02_19976, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 201.8 bits (512), Expect = 5.5e-48
Identity = 104/117 (88.89%), Postives = 110/117 (94.02%), Query Frame = 0


Query: 87  VNEAFVALDLNHDGVLSKSKLRKAFETLRLIETHFGVDVTTLREQLTQLYDSIFEKFDCD 146
           V+EAF ALDLN+DGVLS+S+LRKAFETLRLIETHFGVDV T  E+LTQLYDSIFEKFDCD
Sbjct: 25  VDEAFAALDLNNDGVLSRSELRKAFETLRLIETHFGVDVVTPPEKLTQLYDSIFEKFDCD 84

Query: 147 KSGTVDTEEFRMEMKNILLAIAEGLGSSPIQMALHDGDQSFLKQAADLEASKLAQSS 204
           KSGTVD EEFR EMKNILLAIA+GLGSSPIQMAL DGDQSFLKQAADLEASKLAQSS
Sbjct: 85  KSGTVDAEEFRTEMKNILLAIADGLGSSPIQMALDDGDQSFLKQAADLEASKLAQSS 141

[Close]

BLAST of Lcy05g018230 vs. NCBI nr
Match: XP_022934103.1 (uncharacterized protein LOC111441377 [Cucurbita moschata] >KAG6581608.1 hypothetical protein SDJN03_21610, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 201.8 bits (512), Expect = 5.5e-48
Identity = 104/117 (88.89%), Postives = 110/117 (94.02%), Query Frame = 0


Query: 87  VNEAFVALDLNHDGVLSKSKLRKAFETLRLIETHFGVDVTTLREQLTQLYDSIFEKFDCD 146
           V+EAF ALDLN+DGVLS+S+LRKAFETLRLIETHFGVDV T  E+LTQLYDSIFEKFDCD
Sbjct: 25  VDEAFAALDLNNDGVLSRSELRKAFETLRLIETHFGVDVVTPPEKLTQLYDSIFEKFDCD 84

Query: 147 KSGTVDTEEFRMEMKNILLAIAEGLGSSPIQMALHDGDQSFLKQAADLEASKLAQSS 204
           KSGTVD EEFR EMKNILLAIA+GLGSSPIQMAL DGDQSFLKQAADLEASKLAQSS
Sbjct: 85  KSGTVDAEEFRTEMKNILLAIADGLGSSPIQMALDDGDQSFLKQAADLEASKLAQSS 141

[Close]

BLAST of Lcy05g018230 vs. NCBI nr
Match: XP_022983603.1 (uncharacterized protein LOC111482160 [Cucurbita maxima] >XP_022983604.1 uncharacterized protein LOC111482160 [Cucurbita maxima])

HSP 1 Score: 200.3 bits (508), Expect = 1.6e-47
Identity = 103/117 (88.03%), Postives = 110/117 (94.02%), Query Frame = 0


Query: 87  VNEAFVALDLNHDGVLSKSKLRKAFETLRLIETHFGVDVTTLREQLTQLYDSIFEKFDCD 146
           V+EAF ALDLN+DGVLS+S+LRKAFETLRLIETHFGVDV T  E+LTQLYDSIFE+FDCD
Sbjct: 25  VDEAFAALDLNNDGVLSRSELRKAFETLRLIETHFGVDVVTPPEKLTQLYDSIFEQFDCD 84

Query: 147 KSGTVDTEEFRMEMKNILLAIAEGLGSSPIQMALHDGDQSFLKQAADLEASKLAQSS 204
           KSGTVD EEFR EMKNILLAIA+GLGSSPIQMAL DGDQSFLKQAADLEASKLAQSS
Sbjct: 85  KSGTVDAEEFRTEMKNILLAIADGLGSSPIQMALDDGDQSFLKQAADLEASKLAQSS 141

[Close]

BLAST of Lcy05g018230 vs. TAIR 10
Match: AT2G44310.1 (Calcium-binding EF-hand family protein )

HSP 1 Score: 164.9 bits (416), Expect = 7.0e-41
Identity = 82/118 (69.49%), Postives = 101/118 (85.59%), Query Frame = 0


Query: 87  VNEAFVALDLNHDGVLSKSKLRKAFETLRLIETHFGVDVTTLREQLTQLYDSIFEKFDCD 146
           V+E F ALDLN DGVLS+S+LRKAFE++RL+E+HFGVDV T +++LT LYDSIFEKFD D
Sbjct: 25  VDERFAALDLNKDGVLSRSELRKAFESMRLLESHFGVDVVTPQDELTNLYDSIFEKFDTD 84

Query: 147 KSGTVDTEEFRMEMKNILLAIAEGLGSSPIQMALHDGDQSFLKQAADLEASKLAQSST 205
           +SG+VD EEFR EMK I+LAIA+GLGS PI M L D D +FLK+AADLEASKL ++S+
Sbjct: 85  QSGSVDLEEFRSEMKKIVLAIADGLGSCPITMVLDDDDDNFLKKAADLEASKLEKASS 142

[Close]

BLAST of Lcy05g018230 vs. TAIR 10
Match: AT1G54530.1 (Calcium-binding EF hand family protein )

HSP 1 Score: 52.4 bits (124), Expect = 5.1e-07
Identity = 30/97 (30.93%), Postives = 55/97 (56.70%), Query Frame = 0


Query: 86  LVNEAFVALDLNHDGVLSKSKLRKAFETLRLIETHFGVDVTTLREQLTQLYDSIFEKFDC 145
           + N+ F  LDL+ +G+LS S+LR+    +  +E+          ++   +Y++IFE+F  
Sbjct: 24  ITNDYFQILDLDKNGMLSPSELRQGLNNVVAVESEVAPG-----DETDNVYNAIFERFGE 83

Query: 146 DKSGTVDTEEFRMEMKNILLAIAEGLGSSPIQMALHD 183
           D    +  + FR  +  IL A+A G+G+SP+ M +H+
Sbjct: 84  D----LVPKNFRDLIAEILTAMARGIGNSPVIMVVHN 111

The following BLAST results are available for this feature:

BLAST of Lcy05g018230 vs.


Match Name	E-value	Identity	Description

BLAST of Lcy05g018230 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F6Q4	2.7e-48	88.89	uncharacterized protein LOC111441377 OS=Cucurbita moschata OX=3662 GN=LOC1114413...	[more]
A0A6J1J7W5	7.8e-48	88.03	uncharacterized protein LOC111482160 OS=Cucurbita maxima OX=3661 GN=LOC111482160...	[more]
A0A0A0L9X6	1.0e-47	85.59	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G706670 PE=4 SV=1	[more]
A0A5A7UE76	2.3e-47	84.75	Calcium-binding EF-hand OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3CGR2	2.3e-47	84.75	uncharacterized protein LOC103500282 OS=Cucumis melo OX=3656 GN=LOC103500282 PE=...	[more]

BLAST of Lcy05g018230 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038905172.1	6.6e-49	88.14	uncharacterized protein LOC120091281 [Benincasa hispida]	[more]
KAE8650949.1	2.5e-48	71.15	hypothetical protein Csa_002692 [Cucumis sativus]	[more]
KAG7018108.1	5.5e-48	88.89	hypothetical protein SDJN02_19976, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_022934103.1	5.5e-48	88.89	uncharacterized protein LOC111441377 [Cucurbita moschata] >KAG6581608.1 hypothet...	[more]
XP_022983603.1	1.6e-47	88.03	uncharacterized protein LOC111482160 [Cucurbita maxima] >XP_022983604.1 uncharac...	[more]

BLAST of Lcy05g018230 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G44310.1	7.0e-41	69.49	Calcium-binding EF-hand family protein	[more]
AT1G54530.1	5.1e-07	30.93	Calcium-binding EF hand family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002048	EF-hand domain	SMART	SM00054	efh_1	coord: 86..114 e-value: 2.7 score: 14.2 coord: 135..163 e-value: 0.0078 score: 25.4
IPR002048	EF-hand domain	PFAM	PF13499	EF-hand_7	coord: 89..157 e-value: 7.1E-9 score: 36.0
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 131..166 score: 11.082272
IPR002048	EF-hand domain	CDD	cd00051	EFh	coord: 89..161 e-value: 2.09922E-7 score: 44.4609
None	No IPR available	GENE3D	1.10.238.10		coord: 24..168 e-value: 1.3E-11 score: 46.1
None	No IPR available	PANTHER	PTHR34574	CALCIUM-BINDING EF-HAND FAMILY PROTEIN-RELATED	coord: 80..201
None	No IPR available	PANTHER	PTHR34574:SF5	CALCIUM-BINDING EF-HAND FAMILY PROTEIN	coord: 80..201
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 144..156
IPR011992	EF-hand domain pair	SUPERFAMILY	47473	EF-hand	coord: 83..161

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy05g018230.1	Lcy05g018230.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005509	calcium ion binding