Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTTTGGGGTAGAGACTTATTGCTTAAAGGGCTAAGATATAGGGTTGGGGATGGAGAGAATATATATATGTTTAAAGACCCCTGGATTCCTAAGGAGTCTACTTTCAAGCCTATTTGTACAGATAGGTCCTTGATTAATGCTAAGGTATCAGAGTTTACTGCACCTTCAGGAGATTGGGATCTGGAAAAATTAAAAGGTTCTGTTATGGATTTCGATTATGATCTAATTAGAAACATTCCTATTAATAAGAATTTGAAAGACAAAATGATTTGGCATTACGATAAAACAAGTAGATTTTCAGTGAATAGTGATATAGGCTTTTCCAAAAAATTAAAATTGATGGTAAATCCACTAGTAATAGTCCTATGGAAAGAATCTGGAACAACATTTGGAAATTAAGAATACCCTATAAAATTAAACATTTTTGTTGGGAAGCTCTAAAAGAATCTCTTCCTAAAAAATTTTAATCTTCAACAGAGAGGTATTAATATTTCGAACCTATGCCCTGTTTGTGACTCCCAAATAGAGAACACAGATCATTGTCTTTTTAGTTGTTTTAGAGCTAAAGATGTCTGGAATCTAACCTTTAATAATGTGTTTTTGGAGGAGGAGGAGTCCTTCGGGAGTTTCATCGACAGGTGGATCAGGATCGAATCGACTTTATCCCGGGATGAGCTAGAGTTGGCTACGGTCACATGCTGGGCGATTTGGTGGGACAGGAACAAGCTGGTCCATGGAGAAGCCATTTCCCCTGCATTAATCAAAAGTAACTGGATTAAGAAGTATATTGAATCCTTCAAGAGGGCAAATTCCATAAGAGATTCAAATCGTGTGTCCAATCGAACTCCAGATTCAAGTCAGGAAAACCCTACCTGTTGGGTTCCTCCCTCTGAAGATTTCTGGAAGTTAAATGTCGATGCTGCATGTATCCATCTACCCCCTTCTACGGGTCTGGGAACGTTTTGTAGGAATAAGGATGGTGATGTGATGATTGCCTCTTCTCACTTCTTTGATTTCTACATGGATCCTCTCAGGGTTGAGGTTAAGGCGATTTGGGAAGGAATGAAGAATGCATTGTCGTTGGGAAGATTAAAACTGAAAGTAGAATCAGATAGTTTAATGGCAATCAAGTTTATCAATAAGGAGTTAGTGGTCTGGGATGATGTGGAGGCTGAGGTTGCTAAAATTTGGGATTTAATCCCCTGTTTTTCAGTGATTGATTTTTCGTATATACCCAGGAATTGTAGTAAAGCAGCAGATGTGGTGGCAAAAGCTGCTAGATCATCAGGGGTTAATACAACTTGGATGGGTCAATTCCCAAGTTGGCTTTGTAGGGTGGTCCAGATGGACTTTTCTAATTCTGCCCATGTGGCGTAA
mRNA sequence
ATGCTTTGGGGTAGAGACTTATTGCTTAAAGGGCTAAGATATAGGGTTGGGGATGGAGAGAATATATATATGTTTAAAGACCCCTGGATTCCTAAGGAGTCTACTTTCAAGCCTATTTGTACAGATAGGTCCTTGATTAATGCTAAGGTATCAGAGTTTACTGCACCTTCAGGAGATTGGGATCTGGAAAAATTAAAAGAGAACACAGATCATTGTCTTTTTAGTTGTTTTAGAGCTAAAGATGTCTGGAATCTAACCTTTAATAATGTGTTTTTGGAGGAGGAGGAGTCCTTCGGGAGTTTCATCGACAGGTGGATCAGGATCGAATCGACTTTATCCCGGGATGAGCTAGAGTTGGCTACGGTCACATGCTGGGCGATTTGGTGGGACAGGAACAAGCTGGTCCATGGAGAAGCCATTTCCCCTGCATTAATCAAAAGTAACTGGATTAAGAAGTATATTGAATCCTTCAAGAGGGCAAATTCCATAAGAGATTCAAATCGTGTGTCCAATCGAACTCCAGATTCAAGTCAGGAAAACCCTACCTGTTGGGTTCCTCCCTCTGAAGATTTCTGGAAGTTAAATGTCGATGCTGCATGTATCCATCTACCCCCTTCTACGGGTCTGGGAACGTTTTGTAGGAATAAGGATGGTGATGTGATGATTGCCTCTTCTCACTTCTTTGATTTCTACATGGATCCTCTCAGGGTTGAGGTTAAGGCGATTTGGGAAGGAATGAAGAATGCATTGTCGTTGGGAAGATTAAAACTGAAAGTAGAATCAGATAGTTTAATGGCAATCAAGTTTATCAATAAGGAGTTAGTGGTCTGGGATGATGTGGAGGCTGAGGTTGCTAAAATTTGGGATTTAATCCCCTGTTTTTCAGTGATTGATTTTTCGTATATACCCAGGAATTGTAGTAAAGCAGCAGATGTGGTGGCAAAAGCTGCTAGATCATCAGGGGTTAATACAACTTGGATGGGTCAATTCCCAAGTTGGCTTTGTAGGGTGGTCCAGATGGACTTTTCTAATTCTGCCCATGTGGCGTAA
Coding sequence (CDS)
ATGCTTTGGGGTAGAGACTTATTGCTTAAAGGGCTAAGATATAGGGTTGGGGATGGAGAGAATATATATATGTTTAAAGACCCCTGGATTCCTAAGGAGTCTACTTTCAAGCCTATTTGTACAGATAGGTCCTTGATTAATGCTAAGGTATCAGAGTTTACTGCACCTTCAGGAGATTGGGATCTGGAAAAATTAAAAGAGAACACAGATCATTGTCTTTTTAGTTGTTTTAGAGCTAAAGATGTCTGGAATCTAACCTTTAATAATGTGTTTTTGGAGGAGGAGGAGTCCTTCGGGAGTTTCATCGACAGGTGGATCAGGATCGAATCGACTTTATCCCGGGATGAGCTAGAGTTGGCTACGGTCACATGCTGGGCGATTTGGTGGGACAGGAACAAGCTGGTCCATGGAGAAGCCATTTCCCCTGCATTAATCAAAAGTAACTGGATTAAGAAGTATATTGAATCCTTCAAGAGGGCAAATTCCATAAGAGATTCAAATCGTGTGTCCAATCGAACTCCAGATTCAAGTCAGGAAAACCCTACCTGTTGGGTTCCTCCCTCTGAAGATTTCTGGAAGTTAAATGTCGATGCTGCATGTATCCATCTACCCCCTTCTACGGGTCTGGGAACGTTTTGTAGGAATAAGGATGGTGATGTGATGATTGCCTCTTCTCACTTCTTTGATTTCTACATGGATCCTCTCAGGGTTGAGGTTAAGGCGATTTGGGAAGGAATGAAGAATGCATTGTCGTTGGGAAGATTAAAACTGAAAGTAGAATCAGATAGTTTAATGGCAATCAAGTTTATCAATAAGGAGTTAGTGGTCTGGGATGATGTGGAGGCTGAGGTTGCTAAAATTTGGGATTTAATCCCCTGTTTTTCAGTGATTGATTTTTCGTATATACCCAGGAATTGTAGTAAAGCAGCAGATGTGGTGGCAAAAGCTGCTAGATCATCAGGGGTTAATACAACTTGGATGGGTCAATTCCCAAGTTGGCTTTGTAGGGTGGTCCAGATGGACTTTTCTAATTCTGCCCATGTGGCGTAA
Protein sequence
MLWGRDLLLKGLRYRVGDGENIYMFKDPWIPKESTFKPICTDRSLINAKVSEFTAPSGDWDLEKLKENTDHCLFSCFRAKDVWNLTFNNVFLEEEESFGSFIDRWIRIESTLSRDELELATVTCWAIWWDRNKLVHGEAISPALIKSNWIKKYIESFKRANSIRDSNRVSNRTPDSSQENPTCWVPPSEDFWKLNVDAACIHLPPSTGLGTFCRNKDGDVMIASSHFFDFYMDPLRVEVKAIWEGMKNALSLGRLKLKVESDSLMAIKFINKELVVWDDVEAEVAKIWDLIPCFSVIDFSYIPRNCSKAADVVAKAARSSGVNTTWMGQFPSWLCRVVQMDFSNSAHVA
Homology
BLAST of Lcy05g018060 vs. ExPASy TrEMBL
Match:
A0A6J1DX30 (uncharacterized protein LOC111024874 OS=Momordica charantia OX=3673 GN=LOC111024874 PE=4 SV=1)
HSP 1 Score: 199.1 bits (505), Expect = 3.0e-47
Identity = 132/461 (28.63%), Postives = 189/461 (41.00%), Query Frame = 0
Query: 2 LWGRDLLLKGLRYRVGDGENIYMFKDPWIPKESTFKPICTDRSLINAKVSEFTAPSGDWD 61
LWGRDLL+KGLR RVG+G I F DPW+P+ +TFKP+ + ++ V+ F G+WD
Sbjct: 1005 LWGRDLLVKGLRLRVGNGSTIKAFSDPWLPRPTTFKPLRFNNGALDTTVASFITADGNWD 1064
Query: 62 LEKL-------------------------------------------------------- 121
+ +
Sbjct: 1065 VTSISHSFCNEDRDLILSMPISSYNLQDSWLWHYDKRGNYSVRSGYKLYMHLKCNATSAS 1124
Query: 122 -------------------------------------------------------KENTD 181
+E+
Sbjct: 1125 TNYRGTQWNSIWKLTVPTKIKIFIWRSAHEHIPTAQNLLLRGIGELPACTICGDRRESII 1184
Query: 182 HCLFSCFRAKDVWNLTFNNVFLEEEESFGSFIDRWIRIESTLSRDELELATVTCWAIWWD 241
H F C RA+ +W F + E SF++ W + L +L LA +T W IW D
Sbjct: 1185 HAFFHCKRARQIWRTLFPFLTCLSAEDNISFLELWSSLTEQLEPKDLNLAAITGWGIWND 1244
Query: 242 RNKLVHGEAISPALIKSNWIKKYIESFKRANSIRDSNRVSNRTPDSSQENPTCWVPPSED 301
RN L+HG+ +SP K W+ +++S +A + S RT + + W P S
Sbjct: 1245 RNSLIHGKQVSPVEFKCEWLTPFLDSHSQA----QMSNYSPRTQSNHRPVVQYWRPSSSV 1304
Query: 302 FWKLNVDAACIHLPPSTGLGTFCRNKDGDVMIASSHFFDFYMDPLRVEVKAIWEGMKNAL 350
KLN DAAC ST G R+ ++ A+S F + PL E++ I EG+K A
Sbjct: 1305 SLKLNTDAAC--RGASTSFGCIIRDSSCSLVAATSIRVPFPLSPLLAEIRCILEGLKFAA 1364
BLAST of Lcy05g018060 vs. ExPASy TrEMBL
Match:
A0A803QGR4 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)
HSP 1 Score: 144.4 bits (363), Expect = 8.7e-31
Identity = 87/346 (25.14%), Postives = 161/346 (46.53%), Query Frame = 0
Query: 1 MLWGRDLLLKGLRYRVGDGENIYMFKDPWIPKESTFKPIC-TDRSLINAKVSEFTAPSGD 60
+LWGRDLL GLR+++G+G + + + W+P+ S+F P+C T A +
Sbjct: 426 ILWGRDLLTAGLRWKIGEGRTVRIGSNLWVPEPSSFLPLCYTGPEYATALFRQKVVTDAI 485
Query: 61 WDL-EKLKENTDHCLFSCFRAKDVWNLTFNNVFLEEEESFGSFIDRWIRIESTLSRDELE 120
+ ++ E+ H +F C A+ VW + VF + D + + S ++ ++E
Sbjct: 486 CSICKQAWESIGHAMFDCKYARVVWR-CLDFVFDRNLARSMNKGDYLVHLSSIYTKTDME 545
Query: 121 LATVTCWAIWWDRNKLVHGEAISPALIKSNWIKKYIESFKRANS-IRDSNRVSNRTPDSS 180
T W+IW++RN +VHG+A A + + Y++++ RA + + ++ ++
Sbjct: 546 FILCTMWSIWYERNNVVHGKAEKLAKLAFPFTANYLQNYHRARAKYQSPTATASSNAEAL 605
Query: 181 QENPTCWVPPSEDFWKLNVDAACIHLPPSTGLGTFCRNKDGDVMIASSHFFDFYMDPLRV 240
P W PP + KLNVDA C G+G R+ G V++A S +
Sbjct: 606 PSEP--WQPPEIEILKLNVDATCDKAKNIIGIGAIIRDAYGRVIVAFSKLIIGNFTSHEM 665
Query: 241 EVKAIWEGMKNALSLGRLKLKVESDSLMAIKFINKELVVWDDVEAEVAKIWDLIPCFSVI 300
E KA++ + A+ L +L ++E+D+LM +N + + I L+ F +
Sbjct: 666 EAKALFYSLNLAIQLQQLIGQIETDALMVSNALNASFSAISSFKDLIVDITSLLSFFHRV 725
Query: 301 DFSYIPRNCSKAADVVAKAARSSGVNTTWMGQFPSWLCRVVQMDFS 344
+++ R+ + A +A+ A +W+ P V+ D S
Sbjct: 726 SINHVKRSANMATHSLARYALELDETCSWLEDLPPSFHSVIVNDIS 768
BLAST of Lcy05g018060 vs. ExPASy TrEMBL
Match:
A0A6J1BQ49 (uncharacterized protein LOC111004786 OS=Momordica charantia OX=3673 GN=LOC111004786 PE=4 SV=1)
HSP 1 Score: 141.7 bits (356), Expect = 5.6e-30
Identity = 76/209 (36.36%), Postives = 116/209 (55.50%), Query Frame = 0
Query: 67 ENTDHCLFSCFRAKDVWNLTFNNVFLEEEESFGSFIDRWIRIESTLSRDELELATVTCWA 126
E T H + C RAK +WNL F ++F SF+D W+ + L+ + +LA T WA
Sbjct: 2 EXTSHXIXLCKRAKKIWNLMFPSLFTSPINGNLSFMDIWLLLYDKLNPQQRDLAAFTXWA 61
Query: 127 IWWDRNKLVHGEAISPALIKSNWIKKYIESFKRANSIRDSNRVSNRTPDSSQENPTC-WV 186
IW DRN HG ++S ++ NWI Y +++ +A +++ R+S + SS P+C W+
Sbjct: 62 IWCDRNSXAHGSSVSTPALRCNWISSYFQNYSQA---QENKRISPQ--QSSVPPPSCRWL 121
Query: 187 PPSEDFWKLNVDAACIHLPPSTGLGTFCRNKDGDVMIASSHFFDFYMDPLRVEVKAIWEG 246
PP + K+N DAAC STGLG R+ G +++A S F ++PL E++ I E
Sbjct: 122 PPRDSAMKVNSDAAC--RSTSTGLGLIIRDHFGVLLVAKSMFLPMPLNPLFAEIRGILEA 181
Query: 247 MKNALSLGRLKLKVESDSLMAIKFINKEL 275
+K A S +L VESD AI+ + +L
Sbjct: 182 LKLAASRSYTRLVVESDCQEAIRLVQGDL 203
BLAST of Lcy05g018060 vs. ExPASy TrEMBL
Match:
A0A803NW04 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)
HSP 1 Score: 136.3 bits (342), Expect = 2.4e-28
Identity = 108/405 (26.67%), Postives = 168/405 (41.48%), Query Frame = 0
Query: 3 WGRDLLLKGLRYRVGDGENIYMFKDPWIPKESTFKPICTDRSLINAKVSEFTAPSGDWDL 62
WGR+L +KGLRY++G+G ++ DPWIP S F PI D + VS F + +W++
Sbjct: 801 WGRELFIKGLRYKIGNGYHVSAATDPWIPAISNFCPITYD-GPPSMLVSYFITQAREWNI 860
Query: 63 EKLKE-----NTDHCL---FSCFRAKD--VWNLTFNNVFL-------------EEEESFG 122
LK + D L S F +D +W+ T ++ +E +S
Sbjct: 861 SLLKAHFGDIDVDRILTIPLSFFPTQDRLIWHYTTTGIYTVKSGFHLASDLNDKEFDSAS 920
Query: 123 SFIDRW---------------------------IRIESTLSRDELELATVTCWAIWWDRN 182
+ W + + LS++E EL W IW DRN
Sbjct: 921 NSHQEWHAKDIWNQFHFPIDFAKARHLANGDYLFHLATLLSQEEFELLLCIMWVIWIDRN 980
Query: 183 KLVHGEAISPALIKSNWIKKYIESFKRANSIR-------------DSNRVSNRTPDSSQE 242
K++HG+ A + + Y+ ++ +ANS + S+ ++ + +
Sbjct: 981 KIIHGDMNKDATAMALYAITYMNNYIKANSTKPPTATLSSPSAANPSHTATDANVAAMKA 1040
Query: 243 NPTC---WVPPSEDFWKLNVDAACIHLPPSTGLGTFCRNKDGDVMIASSHFFDFYMDPLR 302
PT W PP + KLNVDAA G+G RN DG V+ A S
Sbjct: 1041 RPTAGVPWTPPLLNKLKLNVDAAINTTDKILGIGAIVRNHDGQVVAALSKPVQGCFRSDE 1100
Query: 303 VEVKAIWEGMKNALSLGRLKLKVESDSLMAIKFINKELVVWDDVEAEVAKIWDLIPCFSV 342
+E KA++ + L VE+D+L IN + + L+ F
Sbjct: 1101 MEAKALFHALNWITQLSLKIDYVETDALRVSSAINNASFDLSSFSDIILDVRCLLSFFPG 1160
BLAST of Lcy05g018060 vs. ExPASy TrEMBL
Match:
A0A803PWX1 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)
HSP 1 Score: 131.7 bits (330), Expect = 5.8e-27
Identity = 98/415 (23.61%), Postives = 172/415 (41.45%), Query Frame = 0
Query: 1 MLWGRDLLLKGLRYRVGDGENIYMFKDPWIPKESTFK-----PICTDRSLINAK------ 60
++WG+ ++ KG R+R+G+G ++ + DPW+P+ TFK P+ +I+ K
Sbjct: 1459 LVWGKKIIQKGYRWRIGNGNSVRVIDDPWLPRPVTFKIYDKPPLPDQLYVIDLKKVRMGV 1518
Query: 61 -----------------VSEFTAPSGDW--DLEKLK------------------------ 120
V T + W L KLK
Sbjct: 1519 FARSGYHDGGTPYKSRDVQSDTQAAEKWWSKLWKLKIPPKVKHFVWKMAHSWIPTNSALA 1578
Query: 121 ------------------ENTDHCLFSCFRAKDVWNLT--FNNVFLEEEESFGSFIDRWI 180
EN H L+ C ++VWN + + + E +F+ +
Sbjct: 1579 HRHIQVEPYCKRCSTGAYENVFHALWGCRVNREVWNGAGFYGRLQRQGREDVLAFL---M 1638
Query: 181 RIESTLSRDELELATVTCWAIWWDRNKLVHGEAISPALIKSNWIKKYIESFKRANSIRDS 240
R+ S ++DE E + W +W+ RN + HG A +W K++ F+ N +
Sbjct: 1639 RVSSLFTKDEFEFFLILSWNLWYIRNSVNHGGHKPQASAILDWCSKFLHEFRENNV---A 1698
Query: 241 NRVSNRTPDSSQENPTCWVPPSEDFWKLNVDAACIHLPPSTGLGTFCRNKDGDVMIASSH 300
+V R ++ W PP +K+NVDA GL + R+ +G VM+A++
Sbjct: 1699 VQVGQRREEAK------WTPPRRGSFKVNVDAGIKAGENLAGLSSVVRDHEGRVMVAATR 1758
Query: 301 FFDFYMDPLRVEVKAIWEGMKNALSLGRLKLKVESDSLMAIKFINKELVVWDDVEAEVAK 342
F + PL+ E++AI G++ + VESD L A+ + KE DV+ +A+
Sbjct: 1759 FVEKKTSPLQGELQAILLGIQTGIQRNLPSFSVESDCLQAVNLVMKEEEGCRDVDGLIAQ 1818
BLAST of Lcy05g018060 vs. NCBI nr
Match:
XP_022158377.1 (uncharacterized protein LOC111024874 [Momordica charantia])
HSP 1 Score: 199.1 bits (505), Expect = 6.2e-47
Identity = 132/461 (28.63%), Postives = 189/461 (41.00%), Query Frame = 0
Query: 2 LWGRDLLLKGLRYRVGDGENIYMFKDPWIPKESTFKPICTDRSLINAKVSEFTAPSGDWD 61
LWGRDLL+KGLR RVG+G I F DPW+P+ +TFKP+ + ++ V+ F G+WD
Sbjct: 1005 LWGRDLLVKGLRLRVGNGSTIKAFSDPWLPRPTTFKPLRFNNGALDTTVASFITADGNWD 1064
Query: 62 LEKL-------------------------------------------------------- 121
+ +
Sbjct: 1065 VTSISHSFCNEDRDLILSMPISSYNLQDSWLWHYDKRGNYSVRSGYKLYMHLKCNATSAS 1124
Query: 122 -------------------------------------------------------KENTD 181
+E+
Sbjct: 1125 TNYRGTQWNSIWKLTVPTKIKIFIWRSAHEHIPTAQNLLLRGIGELPACTICGDRRESII 1184
Query: 182 HCLFSCFRAKDVWNLTFNNVFLEEEESFGSFIDRWIRIESTLSRDELELATVTCWAIWWD 241
H F C RA+ +W F + E SF++ W + L +L LA +T W IW D
Sbjct: 1185 HAFFHCKRARQIWRTLFPFLTCLSAEDNISFLELWSSLTEQLEPKDLNLAAITGWGIWND 1244
Query: 242 RNKLVHGEAISPALIKSNWIKKYIESFKRANSIRDSNRVSNRTPDSSQENPTCWVPPSED 301
RN L+HG+ +SP K W+ +++S +A + S RT + + W P S
Sbjct: 1245 RNSLIHGKQVSPVEFKCEWLTPFLDSHSQA----QMSNYSPRTQSNHRPVVQYWRPSSSV 1304
Query: 302 FWKLNVDAACIHLPPSTGLGTFCRNKDGDVMIASSHFFDFYMDPLRVEVKAIWEGMKNAL 350
KLN DAAC ST G R+ ++ A+S F + PL E++ I EG+K A
Sbjct: 1305 SLKLNTDAAC--RGASTSFGCIIRDSSCSLVAATSIRVPFPLSPLLAEIRCILEGLKFAA 1364
BLAST of Lcy05g018060 vs. NCBI nr
Match:
XP_022131661.1 (uncharacterized protein LOC111004786 [Momordica charantia])
HSP 1 Score: 141.7 bits (356), Expect = 1.2e-29
Identity = 76/209 (36.36%), Postives = 116/209 (55.50%), Query Frame = 0
Query: 67 ENTDHCLFSCFRAKDVWNLTFNNVFLEEEESFGSFIDRWIRIESTLSRDELELATVTCWA 126
E T H + C RAK +WNL F ++F SF+D W+ + L+ + +LA T WA
Sbjct: 2 EXTSHXIXLCKRAKKIWNLMFPSLFTSPINGNLSFMDIWLLLYDKLNPQQRDLAAFTXWA 61
Query: 127 IWWDRNKLVHGEAISPALIKSNWIKKYIESFKRANSIRDSNRVSNRTPDSSQENPTC-WV 186
IW DRN HG ++S ++ NWI Y +++ +A +++ R+S + SS P+C W+
Sbjct: 62 IWCDRNSXAHGSSVSTPALRCNWISSYFQNYSQA---QENKRISPQ--QSSVPPPSCRWL 121
Query: 187 PPSEDFWKLNVDAACIHLPPSTGLGTFCRNKDGDVMIASSHFFDFYMDPLRVEVKAIWEG 246
PP + K+N DAAC STGLG R+ G +++A S F ++PL E++ I E
Sbjct: 122 PPRDSAMKVNSDAAC--RSTSTGLGLIIRDHFGVLLVAKSMFLPMPLNPLFAEIRGILEA 181
Query: 247 MKNALSLGRLKLKVESDSLMAIKFINKEL 275
+K A S +L VESD AI+ + +L
Sbjct: 182 LKLAASRSYTRLVVESDCQEAIRLVQGDL 203
BLAST of Lcy05g018060 vs. NCBI nr
Match:
XP_030487365.1 (uncharacterized protein LOC115704292 [Cannabis sativa])
HSP 1 Score: 133.3 bits (334), Expect = 4.1e-27
Identity = 103/387 (26.61%), Postives = 161/387 (41.60%), Query Frame = 0
Query: 3 WGRDLLLKGLRYRVGDGENIYMFKDPWIPKESTFKPICTDRSLINAKVSEFTAPSGDWDL 62
WG++LLLKGLR+++GDG ++ KDPWIP + FKP+ S + VS F W++
Sbjct: 38 WGKELLLKGLRFKIGDGNHVDCGKDPWIPSHNEFKPVSFSGS-NSMPVSNFITADRVWNV 97
Query: 63 EKL------------------------------------KENTDHCLFSCFRAKDVWNLT 122
+ L + H LF C AK++W LT
Sbjct: 98 QLLSCYFQQIDIDRILSILLSYFAGHDRLVWHHSPNGIYSVKSGHALFGCKHAKNIWKLT 157
Query: 123 -FNNVFLEEEESFGSFIDRWIRIESTLSRDELELATVTCWAIWWDRNKLVHGEAISPALI 182
F F + F D + +T + E E W IW DRNK+VHG
Sbjct: 158 KFQIDFRQAHNMFNG--DYLYHLSATYQQHEFETLLCVLWGIWTDRNKVVHGGIPRQPTA 217
Query: 183 KSNWIKKYIESFKRANS-IRDSNRVSNRTPDSSQENPTC------WVPPSEDFWKLNVDA 242
+ ++ E F R S +R SN P SQ +P+ W PP + +KLNVDA
Sbjct: 218 IVQYATRFYEDFNRLKSHVRPGAVTSNNHP--SQPSPSINQHVQKWRPPQTNGFKLNVDA 277
Query: 243 ACIHLPPSTGLGTFCRNKDGDVMIASSHFFDFYMDPLRVEVKAIWEGMKNALSLGRLKLK 302
A G+G R+ V+ A S +E KA++ +
Sbjct: 278 ATDLEQKKLGIGAILRDHTDTVVAALSKVVQGSFKSDVMEAKALFHAVIWVSQSQFPLTH 337
Query: 303 VESDSLM---AIKFINKELVVWDDVEAEVAKIWDLIPCFSVIDFSYIPRNCSKAADVVAK 343
+E+D+ A+ ++ +L + D+ + I L+ F + +++ R ++AA +AK
Sbjct: 338 IETDASRVSNALNRLDSDLSCFSDI---IMDIRCLLSFFPQVLVTHVKRTANQAAHGLAK 397
BLAST of Lcy05g018060 vs. NCBI nr
Match:
XP_030505068.1 (uncharacterized protein LOC115720043 [Cannabis sativa])
HSP 1 Score: 129.0 bits (323), Expect = 7.8e-26
Identity = 96/409 (23.47%), Postives = 161/409 (39.36%), Query Frame = 0
Query: 1 MLWGRDLLLKGLRYRVGDGENIYMFKDPWIPKESTFKPICTDRSLINAKVSEFTAPSGDW 60
++WG++LL+KGLR++VGDG I+ +PW+P +TFKP+ KVS S W
Sbjct: 923 IMWGKELLIKGLRWKVGDGSQIHCASEPWLPGITTFKPLVFKGDDNTLKVSALILDSRCW 982
Query: 61 ------------DLEKL------------------------------------------- 120
D++K+
Sbjct: 983 NSPLLKYLFLDSDVDKILNIPLALDDHQDCLMWHHESHGNYSVKSGYNLALSLEEQSPSV 1042
Query: 121 ---------------------KENTDHCLFSCFRAKDVWNLTFNNV--FLEEEESFGSFI 180
KE+ H LF C RA+ VW L+ + + S I
Sbjct: 1043 SEILHTRHIAASANSSICNRDKESITHALFFCKRARQVWQLSAFGLDKIISPHMSLNEII 1102
Query: 181 DRWIRIESTLSRDELELATVTCWAIWWDRNKLVHGEAISPALIKSNWIKKYIESFKRANS 240
+ + +T S +LE W+IW +RN+ +HG PA + + Y+ F A
Sbjct: 1103 ---LHLAATWSSSKLEQFATLLWSIWNERNREIHGSKPKPADVLFYFALSYLAEFHSARK 1162
Query: 241 IRDSNRVSNRTPDSSQENPTCWVPPSEDFWKLNVDAACIHLPPSTGLGTFCRNKDGDVMI 300
N ++ R +SS + W+ P KLN DAA + +G G ++ +GD++
Sbjct: 1163 DPAINSLTLRNQNSSVSKDSPWMNPPSGRLKLNTDAAVDKMKHLSGFGAILQSSNGDIVA 1222
Query: 301 ASSHFFDFYMDPLRVEVKAIWEGMKNALSLGRLKLKVESDSLMAIKFINKELVVWDDVEA 332
+ + P +EV A+ +K L +E+DS + + + + +
Sbjct: 1223 TMAAPYQGCFKPEIMEVMALMHSLKWLQELDLPVHFIETDSQLVVNGLKPSKRPVSEFHS 1282
BLAST of Lcy05g018060 vs. NCBI nr
Match:
XP_030498035.1 (uncharacterized protein LOC115713693 [Cannabis sativa])
HSP 1 Score: 128.6 bits (322), Expect = 1.0e-25
Identity = 107/360 (29.72%), Postives = 157/360 (43.61%), Query Frame = 0
Query: 3 WGRDLLLKGLRYRVGDGENIYMFKDPW-------IPKE---------STFKPICTDRSLI 62
WGRD K + G KD W +P + F P+ +L
Sbjct: 248 WGRDCCSKDFDTKWGMESASTSHKDLWKLFWNLKLPSKIKIFAWRVIQNFLPVAA--ALY 307
Query: 63 NAKVSEFTAPSGDWDLEKLKENTDHCLFSCFRAKDVW-NLTFNNVFLEEEESFGSFIDRW 122
KV A S + +E+ H LF C AK VW + + F + + G D
Sbjct: 308 KKKVLTSAACS---LCSQARESIGHALFQCKHAKAVWRHFNYPIDFNKAQNMVGG--DYI 367
Query: 123 IRIESTLSRDELELATVTCWAIWWDRNKLVHGEAISPALIKSNWIKKYIESFKRANSIRD 182
+ + LS+ ELEL V W IW DRNK+ HGE+ + +N+ Y+E++ +AN+ R
Sbjct: 368 FHLATLLSQQELELVFVIMWVIWTDRNKINHGESRRDGMALANYATNYMENYHKANN-RP 427
Query: 183 SNRVSNRTPDSSQENPT---CWVPPSEDFWKLNVDAACIHLPPSTGLGTFCRNKDGDVMI 242
+ TP PT W PP KLNVDAA G+G RN G+VM
Sbjct: 428 TAVTEPVTPAQISTLPTEGIPWKPPDMYGLKLNVDAAVNPTSKVLGVGAIVRNYKGEVMA 487
Query: 243 ASSHFFDFYMDPLRVEVKAIWEGMKNALSLGRLKLKVESDSLMAIKFINKE---LVVWDD 302
A S +E KA++ + L VE+D+L F+N E L + D
Sbjct: 488 AMSKLVQGCFRSDEMEAKALFHALNWISQLPLSVTLVETDALRVSNFLNHETWDLSCFSD 547
Query: 303 VEAEVAKIWDLIPCFSVIDFSYIPRNCSKAADVVAKAARSSGVNTTWMGQFPSWLCRVVQ 340
+ + + L+ FS I S++ R+ ++AA +AK A V+T WMG+ P + VV+
Sbjct: 548 I---IFDVRCLLSSFSRIVISHVKRSANQAAHGLAKHALGLDVDTCWMGEIPYPIFSVVK 596
BLAST of Lcy05g018060 vs. TAIR 10
Match:
AT5G65005.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )
HSP 1 Score: 60.8 bits (146), Expect = 2.4e-09
Identity = 56/223 (25.11%), Postives = 88/223 (39.46%), Query Frame = 0
Query: 125 WAIWWDRNKLVHGEA----ISPALIKSNWIKKYIESFKRANSIRDSNRVSNRTPDSSQEN 184
W IW N LV + + N K++++ N++ + + NR D S+
Sbjct: 49 WRIWKSGNDLVFNHTRTKFQTTVEMALNDTKEWLD-----NTMTNEQQNGNRNADPSRN- 108
Query: 185 PTCWVPPSEDFWKLNVDAACIHLPPSTGLGTFCRNKDGDVMIASSHFFDFYMDPLRVEVK 244
T W PP D K N DA+ +GLG RN G V+ F M E
Sbjct: 109 -TKWSPPGRDKLKCNYDASHHERNTVSGLGWILRNSQGTVIECGMGKFQGRMTTEEAECS 168
Query: 245 AIWEGMKNALSLGRLKLKVESDSLMAIKFINKELVVWDDVEAEVAKIWDLIPCFSVIDFS 304
+ ++ + G K+ E D+ + IN + ++ + I IP F I+FS
Sbjct: 169 TLIWAIQASYGFGHKKVIFEGDNQTITRMINTKSSN-PRLQHFLDTIQSWIPSFESIEFS 228
Query: 305 YIPRNCSKAADVVAKAARSSGVNTTWMGQFPSWLCRVVQMDFS 344
+ R + AD +AK A + P +L V D+S
Sbjct: 229 FKHREQNGCADFLAKQAIKENTQWSLFHSCPYFLSPYVNNDYS 263
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1DX30 | 3.0e-47 | 28.63 | uncharacterized protein LOC111024874 OS=Momordica charantia OX=3673 GN=LOC111024... | [more] |
A0A803QGR4 | 8.7e-31 | 25.14 | Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1 | [more] |
A0A6J1BQ49 | 5.6e-30 | 36.36 | uncharacterized protein LOC111004786 OS=Momordica charantia OX=3673 GN=LOC111004... | [more] |
A0A803NW04 | 2.4e-28 | 26.67 | Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1 | [more] |
A0A803PWX1 | 5.8e-27 | 23.61 | Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
AT5G65005.1 | 2.4e-09 | 25.11 | Polynucleotidyl transferase, ribonuclease H-like superfamily protein | [more] |