Lcy05g017900 (gene) Sponge gourd (P93075) v1

Overview
NameLcy05g017900
Typegene
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionRibonuclease H-like superfamily protein
LocationChr05: 33272363 .. 33273118 (-)
RNA-Seq ExpressionLcy05g017900
SyntenyLcy05g017900
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATGGCTAGGTTCTGGTGGGGCTCAACGGATGCTAAAAAGAAAATTCACTGGAAGAAATGGGAGTTTCTTTGTGCTCCAAAAGAGGTAGGAGGGTTGAATTTTCGAGATATGATGAGTTTCAATAAAGCTTTACTTGCAAAACAGGTATGGCAGATTTTTACATCCCCCAATCTCTTGGTTTCAAAAATCATTTGTGGTAGGTCTTCACATGGCACCTCGTTATTGCAAGCTCCAGTAAAATCTAATTGCTCATTTTTCTGGAGGGGTTGTGTCTGGGCTAGTAGTTTGCTTTTAAAGGGTATACGAAAACAGGTGGGTAATGGATTGGATATCAATTTGTTCAAAGATCCATGAATTCCCAAAGAAACAACATTTAGGCTGGTGCAAAAGGTGACATCAGACAGATGTGAGGATAGGGTGGTGGCAGAATTTATAACCCCTACAAAGGAGTGGGATATAGCAAAGCTTCGAGAATATGTTCTAGAAGGGGATGTTAGAATCATCGCTACAATTCCTATTAGTTCGATAAACGATGAGGATAAATGGATTTGGCATTACTCTAAGAATGGGGCTTATTCGGTTAAAAGTGGGTATAAATTGGCCATGATGTCTATTGATGGGCTGGGATCGACGAGTGATAATACTCAGAATCGTTGGTGGAATATGTTATGGAAGTCACAGGTGCCGTCTAAGGTCAAACTTTTTATCTGGAAGGCCTTCCATGAATGTCTACCGACTAATTTCTGTCTCTAG

mRNA sequence

ATGATGGCTAGGTTCTGGTGGGGCTCAACGGATGCTAAAAAGAAAATTCACTGGAAGAAATGGGAGTTTCTTTGTGCTCCAAAAGAGGTAGGAGGGTTGAATTTTCGAGATATGATGAGTTTCAATAAAGCTTTACTTGCAAAACAGGTGACATCAGACAGATGTGAGGATAGGGTGGTGGCAGAATTTATAACCCCTACAAAGGAGTGGGATATAGCAAAGCTTCGAGAATATGTTCTAGAAGGGGATGTTAGAATCATCGCTACAATTCCTATTAGTTCGATAAACGATGAGGATAAATGGATTTGGCATTACTCTAAGAATGGGGCTTATTCGGTTAAAAGTGGGTATAAATTGGCCATGATGTCTATTGATGGGCTGGGATCGACGAGTGATAATACTCAGAATCGTTGGTGGAATATGTTATGGAAGTCACAGGTGCCGTCTAAGGTCAAACTTTTTATCTGGAAGGCCTTCCATGAATGTCTACCGACTAATTTCTGTCTCTAG

Coding sequence (CDS)

ATGATGGCTAGGTTCTGGTGGGGCTCAACGGATGCTAAAAAGAAAATTCACTGGAAGAAATGGGAGTTTCTTTGTGCTCCAAAAGAGGTAGGAGGGTTGAATTTTCGAGATATGATGAGTTTCAATAAAGCTTTACTTGCAAAACAGGTGACATCAGACAGATGTGAGGATAGGGTGGTGGCAGAATTTATAACCCCTACAAAGGAGTGGGATATAGCAAAGCTTCGAGAATATGTTCTAGAAGGGGATGTTAGAATCATCGCTACAATTCCTATTAGTTCGATAAACGATGAGGATAAATGGATTTGGCATTACTCTAAGAATGGGGCTTATTCGGTTAAAAGTGGGTATAAATTGGCCATGATGTCTATTGATGGGCTGGGATCGACGAGTGATAATACTCAGAATCGTTGGTGGAATATGTTATGGAAGTCACAGGTGCCGTCTAAGGTCAAACTTTTTATCTGGAAGGCCTTCCATGAATGTCTACCGACTAATTTCTGTCTCTAG

Protein sequence

MMARFWWGSTDAKKKIHWKKWEFLCAPKEVGGLNFRDMMSFNKALLAKQVTSDRCEDRVVAEFITPTKEWDIAKLREYVLEGDVRIIATIPISSINDEDKWIWHYSKNGAYSVKSGYKLAMMSIDGLGSTSDNTQNRWWNMLWKSQVPSKVKLFIWKAFHECLPTNFCL
Homology
BLAST of Lcy05g017900 vs. ExPASy Swiss-Prot
Match: P93295 (Uncharacterized mitochondrial protein AtMg00310 OS=Arabidopsis thaliana OX=3702 GN=AtMg00310 PE=4 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 2.2e-08
Identity = 28/49 (57.14%), Postives = 33/49 (67.35%), Query Frame = 0

Query: 2  MARFWWGSTDAKKKIHWKKWEFLCAPKE-VGGLNFRDMMSFNKALLAKQ 50
          M  FWW S + K+KI W  W+ LC  KE  GGL FRD+  FN+ALLAKQ
Sbjct: 25 MTEFWWSSCENKRKISWVAWQKLCKSKEDDGGLGFRDLGWFNQALLAKQ 73

BLAST of Lcy05g017900 vs. ExPASy Swiss-Prot
Match: P0C2F6 (Putative ribonuclease H protein At1g65750 OS=Arabidopsis thaliana OX=3702 GN=At1g65750 PE=3 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 4.1e-07
Identity = 29/112 (25.89%), Postives = 57/112 (50.89%), Query Frame = 0

Query: 55  CEDRVVAEFITPTKEWDIAKLREYVLEGDVRIIATIPISSIND-EDKWIWHYSKNGAYSV 114
           C+  V  +   P + WD AK+  Y        +  + +  +    D+  W +S++G +SV
Sbjct: 208 CDTVVAKDLWIPGRGWDFAKIDPYTTNNTRLELRAVVLDLVTGARDRLSWKFSQDGQFSV 267

Query: 115 KSGYKLAMMSIDGLGSTSDNTQNRWWNMLWKSQVPSKVKLFIWKAFHECLPT 166
           +S Y+  M+++D +   +      ++N LWK +VP +VK F+W   ++ + T
Sbjct: 268 RSAYE--MLTVDEVPRPN---MASFFNCLWKVRVPERVKTFLWLVGNQAVMT 314

BLAST of Lcy05g017900 vs. ExPASy TrEMBL
Match: A0A803PYI0 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 156.0 bits (393), Expect = 1.4e-34
Identity = 75/167 (44.91%), Postives = 103/167 (61.68%), Query Frame = 0

Query: 1    MMARFWWGSTDAKKKIHWKKWEFLCAPKEVGGLNFRDMMSFNKALLAKQVTSDRCEDRVV 60
            M +RFWWGS+D +KKIHW KW +LC PK+ GGL FRD+  FN+ALLAKQ+       + +
Sbjct: 1247 MASRFWWGSSDKEKKIHWCKWRYLCRPKDKGGLGFRDLGMFNQALLAKQIWRCIRHPQQL 1306

Query: 61   AEFITPTKEWDIAKLREYVLE-GDVRIIATIPISSINDEDKWIWHYSKNGAYSVKSGYKL 120
               +     +     R+ VLE G   +I  IP S  + EDK +WHYSKNG Y+VKS Y++
Sbjct: 1307 CSRVLKASYFP----RKGVLEAGYAELILAIPCSDWDFEDKILWHYSKNGEYTVKSVYRM 1366

Query: 121  AMMSIDGLGSTSDNTQNRWWNMLWKSQVPSKVKLFIWKAFHECLPTN 167
            A         ++D++  +WW  LW+ ++P KVK F+WK  H  LPTN
Sbjct: 1367 ASSLSTEQHQSNDHSLVQWWKKLWRLKIPPKVKHFVWKVAHNWLPTN 1409

BLAST of Lcy05g017900 vs. ExPASy TrEMBL
Match: A0A803QA44 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 151.8 bits (382), Expect = 2.6e-33
Identity = 79/204 (38.73%), Postives = 103/204 (50.49%), Query Frame = 0

Query: 1   MMARFWWGSTDAKKKIHWKKWEFLCAPKEVGGLNFRDMMSFNKALLAKQ----------- 60
           M ARFWWGS++   KIHW KW +LC PKE GGL FRD+  FNKALLAKQ           
Sbjct: 168 MAARFWWGSSEKNNKIHWSKWSYLCKPKEKGGLGFRDLGLFNKALLAKQVWRKIMGYRWR 227

Query: 61  --------VTSDRCEDRVVA------------EFITPTK----EWDIAKLREYVLEGDVR 120
                   V  D C    V+             ++T  K     WD   +       D  
Sbjct: 228 IGNGNSVRVLEDPCLPHPVSFKIFDPPPVPSPLYVTDLKNADGSWDAMFINAVFNREDAE 287

Query: 121 IIATIPISSINDEDKWIWHYSKNGAYSVKSGYKLAMMSIDGLGSTSDNTQNRWWNMLWKS 170
           +I  IP +  + EDK +WHY KNG YSV +GY+LA   ++    + ++  + WWN LWK 
Sbjct: 288 LILGIPSTDCDLEDKIMWHYRKNGEYSVSNGYRLASDLLEEESQSDNSRLSGWWNGLWKK 347

BLAST of Lcy05g017900 vs. ExPASy TrEMBL
Match: A0A803QHJ7 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 150.2 bits (378), Expect = 7.7e-33
Identity = 74/170 (43.53%), Postives = 102/170 (60.00%), Query Frame = 0

Query: 1   MMARFWWGSTDAKKKIHWKKWEFLCAPKEVGGLNFRDMMSFNKALLAKQVTSDRCEDRVV 60
           M ARFWWGS++  KKIHW KWE LC PK+ GG+ F D+  FN+ALLAKQ+   RC     
Sbjct: 350 MTARFWWGSSEKDKKIHWCKWEHLCKPKDKGGMGFCDLGMFNQALLAKQIW--RC----- 409

Query: 61  AEFITPTKEWD-IAKLREYVLEGDVRIIATIPISSINDEDKWIWHYSKNGAYSVKSGYKL 120
                PT   + + K      + D  +I ++P S  + +DK +WHYSKNG YSVKSGY++
Sbjct: 410 --IRYPTALCNRVLKASAVFNKDDAEMILSLPNSGWDIDDKILWHYSKNGEYSVKSGYRM 469

Query: 121 AMMSIDGLGSTSDNTQNRWWNMLWKSQVPSKVKLFIWKAFHECLPTNFCL 170
           A         + D+   +WW  LW+ ++P K+K+F+WK  H  LPT+  L
Sbjct: 470 ACELKAERQQSDDHLAVQWWRKLWRLKIPQKIKVFVWKLAHGWLPTSTVL 510

BLAST of Lcy05g017900 vs. ExPASy TrEMBL
Match: A0A803QAH8 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 147.1 bits (370), Expect = 6.5e-32
Identity = 77/212 (36.32%), Postives = 104/212 (49.06%), Query Frame = 0

Query: 1    MMARFWWGSTDAKKKIHWKKWEFLCAPKEVGGLNFRDMMSFNKALLAKQ----------- 60
            +M+ FWWGST  KKKIHWK+W+FLC  K  GGL FR+ + FN+ALLAKQ           
Sbjct: 1261 LMSNFWWGSTSDKKKIHWKQWKFLCKSKLEGGLGFRNFIHFNQALLAKQAWRLFQNPESL 1320

Query: 61   ---------------VTSDRC----------------------EDRVVAEFITPTKEWDI 120
                           +++  C                          VA++ITP KEW++
Sbjct: 1321 LFCVLKGRYFSRSDFLSAATCACATDPWIPGNSIFTPIYFTGAPTNTVADYITPEKEWNV 1380

Query: 121  AKLREYVLEGDVRIIATIPISSINDEDKWIWHYSKNGAYSVKSGYKLAMMSIDGLGSTSD 165
            +KL       DV  I ++P+S     D W+WH ++ G Y VKSGY +A M  D    +  
Sbjct: 1381 SKLNADFSSADVERILSLPLSHHAHSDYWVWHATR-GQYEVKSGYHVACMLADETFVSVS 1440

BLAST of Lcy05g017900 vs. ExPASy TrEMBL
Match: A0A803P3X4 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 142.1 bits (357), Expect = 2.1e-30
Identity = 78/212 (36.79%), Postives = 109/212 (51.42%), Query Frame = 0

Query: 1    MMARFWWGSTDAKKKIHWKKWEFLCAPKEVGGLNFRDMMSFNKALLAKQVTSDRCEDRVV 60
            M ARFWWGS++   KIHW KW  LC  KE GGL FRD+  FN+ALLAKQ+ S     +++
Sbjct: 1284 MAARFWWGSSEKDAKIHWYKWSILCKHKEQGGLGFRDLGLFNQALLAKQIWSLVWGKKII 1343

Query: 61   AE--------------------------------------FITPTK----EWDIAKLREY 120
             +                                      ++   K    EWD   +R  
Sbjct: 1344 QKGYRWRIGYGNSVRVLEDPWLPRPVTFKIYDKPPLPDQLYVIDLKKINGEWDEEFVRAV 1403

Query: 121  VLEGDVRIIATIPISSINDEDKWIWHYSKNGAYSVKSGYKL-AMMSIDGLGSTSDNTQNR 170
                D  +I  +P S  + EDK +WHYSK+G YSV+SGY++ A + +  + S ++ T+ +
Sbjct: 1404 FNPTDADLILRMPTSEWDIEDKVLWHYSKDGEYSVRSGYRMAAALQVRDVQSDTEVTE-K 1463

BLAST of Lcy05g017900 vs. NCBI nr
Match: XP_030509188.1 (uncharacterized protein LOC115723863 [Cannabis sativa])

HSP 1 Score: 146.7 bits (369), Expect = 1.8e-31
Identity = 75/203 (36.95%), Postives = 104/203 (51.23%), Query Frame = 0

Query: 1    MMARFWWGSTDAKKKIHWKKWEFLCAPKEVGGLNFRDMMSFNKALLAKQ----------V 60
            MMA FWWGS+ + K IHWK W FLC  K  GGL FR+ + FN+ALLAKQ          +
Sbjct: 834  MMANFWWGSSASGKSIHWKNWNFLCKAKVQGGLGFRNFIHFNQALLAKQAWRLIEFPNSL 893

Query: 61   TSDRCEDR-----------------------------VVAEFITPTKEWDIAKLREYVLE 120
             S     R                             +VA+ IT  ++WD+  LR    +
Sbjct: 894  LSKLLRHRYFSNGRFLSSGLGSNPSLTWRSLGADPNLLVADLITEQRQWDLISLRANFSQ 953

Query: 121  GDVRIIATIPISSINDEDKWIWHYSKNGAYSVKSGYKLAMMSIDGLGSTSDNTQNRWWNM 165
             DV  I +IP+S    +D  IW +S  G Y+VKSGY+LA+   +   + S ++   WW+ 
Sbjct: 954  PDVDRILSIPLSLFPHDDAMIWSHSFTGIYNVKSGYQLAVSYAEQDDTASSHSMENWWST 1013

BLAST of Lcy05g017900 vs. NCBI nr
Match: XP_030509336.1 (uncharacterized protein LOC115724021 [Cannabis sativa])

HSP 1 Score: 138.3 bits (347), Expect = 6.2e-29
Identity = 79/243 (32.51%), Postives = 105/243 (43.21%), Query Frame = 0

Query: 1   MMARFWWGSTDAKKKIHWKKWEFLCAPKEVGGLNFRDMMSFNKALLAKQV---------- 60
           MMA FWWGS   KKK HW+KW+ LC  K  GG+ FR  + FN+ALLAKQ           
Sbjct: 566 MMANFWWGSDKDKKKTHWRKWKLLCKTKMDGGMGFRSFIHFNQALLAKQAWRIIQFPHSL 625

Query: 61  -------------------------------------------------TSDRC------ 120
                                                            +S +C      
Sbjct: 626 LSRVLKGRYFSHNDFLQAPKTGCSSLTWQGICWGRDLLVKGLRLKIGDGSSVQCISDPWI 685

Query: 121 --------------EDRVVAEFITPTKEWDIAKLREYVLEGDVRIIATIPISSINDEDKW 165
                            +V+ +IT  KEW++  L       DV  I +IP+SS +  D+W
Sbjct: 686 PRHSEFTPICFLGDTQNLVSYYITDDKEWNLPLLARDFSAVDVDYILSIPLSSSSVSDQW 745

BLAST of Lcy05g017900 vs. NCBI nr
Match: XP_030505962.1 (uncharacterized protein LOC115720894 [Cannabis sativa])

HSP 1 Score: 138.3 bits (347), Expect = 6.2e-29
Identity = 68/186 (36.56%), Postives = 99/186 (53.23%), Query Frame = 0

Query: 1   MMARFWWGSTDAKKKIHWKKWEFLCAPKEVGGLNF-RDMMSFNKALLAKQVTSDRCE--- 60
           MMA FWWGS   KKK HW+KW+ LC  K  GG+ + RD++     L     +S  C    
Sbjct: 693 MMANFWWGSDKDKKKTHWRKWKLLCKTKMDGGICWGRDLLVKGLRLKIGDGSSVTCSSDP 752

Query: 61  -----------------DRVVAEFITPTKEWDIAKLREYVLEGDVRIIATIPISSINDED 120
                              +V+ +IT  KEW++  L       D+  I +IP+SS +  D
Sbjct: 753 WIPRHSEFTPFYYSGDPQNLVSFYITEDKEWNLPLLTCDFSAVDIDFILSIPLSSSHVRD 812

Query: 121 KWIWHYSKNGAYSVKSGYKLAMMSIDGLGSTSDNTQNRWWNMLWKSQVPSKVKLFIWKAF 166
           +WIWH++ +  Y+V++GY LA    +    TS  +Q+ WW   W  ++PSKVK+F+WKAF
Sbjct: 813 QWIWHFTNSSEYTVQTGYHLATELDESELPTSSTSQHSWWKYFWNLKLPSKVKIFVWKAF 872

BLAST of Lcy05g017900 vs. NCBI nr
Match: XP_030509050.1 (uncharacterized protein LOC115723712 [Cannabis sativa])

HSP 1 Score: 136.0 bits (341), Expect = 3.1e-28
Identity = 78/247 (31.58%), Postives = 110/247 (44.53%), Query Frame = 0

Query: 1    MMARFWWGSTDAKKKIHWKKWEFLCAPKEVGGLNFRDMMSFNKALLAKQ----------- 60
            +M+RFWWG +     IHWK W+FLC  K  GG+ FR+ + FN+ALLAKQ           
Sbjct: 834  LMSRFWWGKSANGNAIHWKNWKFLCKSKVHGGMGFRNFVHFNQALLAKQAWRILEDPSSL 893

Query: 61   ------------------------------------------------------------ 120
                                                                        
Sbjct: 894  IARVLKSRYFATGVFLEATAGAQPSLTWKSIVWGKELLLKGLRWRIGSGADVNCVSQPWI 953

Query: 121  -----------VTSDRCEDRVVAEFITPTKEWDIAKLREYVLEGDVRIIATIPISSINDE 166
                       ++ DR  D  VA+FIT +++WD+ KL+++    DV  I +IP+S    E
Sbjct: 954  PGPSNFKPLLFLSPDR--DVKVADFITHSRQWDVPKLQQFFTPPDVDRILSIPLSLFPCE 1013

BLAST of Lcy05g017900 vs. NCBI nr
Match: XP_030479133.1 (uncharacterized protein LOC115696372 [Cannabis sativa])

HSP 1 Score: 135.6 bits (340), Expect = 4.0e-28
Identity = 80/243 (32.92%), Postives = 101/243 (41.56%), Query Frame = 0

Query: 1    MMARFWWGSTDAKKKIHWKKWEFLCAPKEVGGLNFRDMMSFNKALLAKQV---------- 60
            MMA+FWWGS+   KKIHWKKW FLC  K  GG+ FR  + FN+ALLAKQ           
Sbjct: 785  MMAKFWWGSSSDNKKIHWKKWRFLCKSKGDGGMGFRSFVHFNQALLAKQAWRIFQDPTSL 844

Query: 61   -------------------------------------------------TSDRC------ 120
                                                              + RC      
Sbjct: 845  LSRVLKGHYFSQNDFMTARGGGLSSLTWQGIVWGRELLVKGLRLKVGTGNNIRCAVDSWI 904

Query: 121  --------------EDRVVAEFITPTKEWDIAKLREYVLEGDVRIIATIPISSINDEDKW 165
                              VA++IT T+EW+I  L+      DV  I  IP+S +   D+W
Sbjct: 905  PGHKGFKPYCYTGAHTNHVADYITATREWNIECLQSDFSTPDVDNILKIPLSFLPVNDRW 964

BLAST of Lcy05g017900 vs. TAIR 10
Match: AT4G29090.1 (Ribonuclease H-like superfamily protein )

HSP 1 Score: 67.0 bits (162), Expect = 1.6e-11
Identity = 56/256 (21.88%), Postives = 89/256 (34.77%), Query Frame = 0

Query: 1   MMARFWWGSTDAKKKIHWKKWEFLCAPKEVGGLNFRDMMSFNKALLAKQV--TSDRCEDR 60
           ++A FWW +    K +HWK W+ L   K  GG+ F+D+ +FN ALL KQ+     R E  
Sbjct: 24  VLADFWWRNKQEAKGMHWKAWDHLSCYKAEGGIGFKDIEAFNLALLGKQMWRMLSRPESL 83

Query: 61  VVAEFIT----------------PTKEWDIAKLREYVLEGDVRII--------------- 120
           +   F +                P+  W      + +L    R +               
Sbjct: 84  MAKVFKSRYFHKSDPLNAPLGSRPSFVWKSIHASQEILRQGARAVVGNGEDIIIWRHKWL 143

Query: 121 -----------------------ATIPISSINDE-------------------------- 165
                                  + + +S + DE                          
Sbjct: 144 DSKPASAALRMQRVPPQEYASVSSILKVSDLIDESGREWRKDVIEMLFPEVERKLIGELR 203

BLAST of Lcy05g017900 vs. TAIR 10
Match: ATMG00310.1 (RNA-directed DNA polymerase (reverse transcriptase)-related family protein )

HSP 1 Score: 60.5 bits (145), Expect = 1.5e-09
Identity = 28/49 (57.14%), Postives = 33/49 (67.35%), Query Frame = 0

Query: 2  MARFWWGSTDAKKKIHWKKWEFLCAPKE-VGGLNFRDMMSFNKALLAKQ 50
          M  FWW S + K+KI W  W+ LC  KE  GGL FRD+  FN+ALLAKQ
Sbjct: 25 MTEFWWSSCENKRKISWVAWQKLCKSKEDDGGLGFRDLGWFNQALLAKQ 73

BLAST of Lcy05g017900 vs. TAIR 10
Match: AT3G09510.1 (Ribonuclease H-like superfamily protein )

HSP 1 Score: 52.8 bits (125), Expect = 3.2e-07
Identity = 31/102 (30.39%), Postives = 52/102 (50.98%), Query Frame = 0

Query: 70  WDIAKLREYVLEGDVRIIATIPISSINDEDKWIWHYSKNGAYSVKSGYKL----AMMSID 129
           WD +K+ ++V + D   I  I ++     DK IW+Y+  G Y+V+SGY L       +I 
Sbjct: 88  WDDSKISQFVDQSDHGFIHRIYLAKSKKPDKIIWNYNTTGEYTVRSGYWLLTHDPSTNIP 147

Query: 130 GLGST--SDNTQNRWWNMLWKSQVPSKVKLFIWKAFHECLPT 166
            +     S + + R WN+     +  K+K F+W+A  + L T
Sbjct: 148 AINPPHGSIDLKTRIWNL----PIMPKLKHFLWRALSQALAT 185

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
P932952.2e-0857.14Uncharacterized mitochondrial protein AtMg00310 OS=Arabidopsis thaliana OX=3702 ... [more]
P0C2F64.1e-0725.89Putative ribonuclease H protein At1g65750 OS=Arabidopsis thaliana OX=3702 GN=At1... [more]
Match NameE-valueIdentityDescription
A0A803PYI01.4e-3444.91Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1[more]
A0A803QA442.6e-3338.73Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1[more]
A0A803QHJ77.7e-3343.53Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1[more]
A0A803QAH86.5e-3236.32Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1[more]
A0A803P3X42.1e-3036.79Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
XP_030509188.11.8e-3136.95uncharacterized protein LOC115723863 [Cannabis sativa][more]
XP_030509336.16.2e-2932.51uncharacterized protein LOC115724021 [Cannabis sativa][more]
XP_030505962.16.2e-2936.56uncharacterized protein LOC115720894 [Cannabis sativa][more]
XP_030509050.13.1e-2831.58uncharacterized protein LOC115723712 [Cannabis sativa][more]
XP_030479133.14.0e-2832.92uncharacterized protein LOC115696372 [Cannabis sativa][more]
Match NameE-valueIdentityDescription
AT4G29090.11.6e-1121.88Ribonuclease H-like superfamily protein [more]
ATMG00310.11.5e-0957.14RNA-directed DNA polymerase (reverse transcriptase)-related family protein [more]
AT3G09510.13.2e-0730.39Ribonuclease H-like superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR026960Reverse transcriptase zinc-binding domainPFAMPF13966zf-RVTcoord: 111..166
e-value: 5.0E-9
score: 36.7
NoneNo IPR availablePANTHERPTHR46736:SF6SUBFAMILY NOT NAMEDcoord: 81..166
NoneNo IPR availablePANTHERPTHR46736FAMILY NOT NAMEDcoord: 81..166

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lcy05g017900.1Lcy05g017900.1mRNA