Lcy05g017900 (gene) Sponge gourd (P93075) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGATGGCTAGGTTCTGGTGGGGCTCAACGGATGCTAAAAAGAAAATTCACTGGAAGAAATGGGAGTTTCTTTGTGCTCCAAAAGAGGTAGGAGGGTTGAATTTTCGAGATATGATGAGTTTCAATAAAGCTTTACTTGCAAAACAGGTATGGCAGATTTTTACATCCCCCAATCTCTTGGTTTCAAAAATCATTTGTGGTAGGTCTTCACATGGCACCTCGTTATTGCAAGCTCCAGTAAAATCTAATTGCTCATTTTTCTGGAGGGGTTGTGTCTGGGCTAGTAGTTTGCTTTTAAAGGGTATACGAAAACAGGTGGGTAATGGATTGGATATCAATTTGTTCAAAGATCCATGAATTCCCAAAGAAACAACATTTAGGCTGGTGCAAAAGGTGACATCAGACAGATGTGAGGATAGGGTGGTGGCAGAATTTATAACCCCTACAAAGGAGTGGGATATAGCAAAGCTTCGAGAATATGTTCTAGAAGGGGATGTTAGAATCATCGCTACAATTCCTATTAGTTCGATAAACGATGAGGATAAATGGATTTGGCATTACTCTAAGAATGGGGCTTATTCGGTTAAAAGTGGGTATAAATTGGCCATGATGTCTATTGATGGGCTGGGATCGACGAGTGATAATACTCAGAATCGTTGGTGGAATATGTTATGGAAGTCACAGGTGCCGTCTAAGGTCAAACTTTTTATCTGGAAGGCCTTCCATGAATGTCTACCGACTAATTTCTGTCTCTAG ATGATGGCTAGGTTCTGGTGGGGCTCAACGGATGCTAAAAAGAAAATTCACTGGAAGAAATGGGAGTTTCTTTGTGCTCCAAAAGAGGTAGGAGGGTTGAATTTTCGAGATATGATGAGTTTCAATAAAGCTTTACTTGCAAAACAGGTGACATCAGACAGATGTGAGGATAGGGTGGTGGCAGAATTTATAACCCCTACAAAGGAGTGGGATATAGCAAAGCTTCGAGAATATGTTCTAGAAGGGGATGTTAGAATCATCGCTACAATTCCTATTAGTTCGATAAACGATGAGGATAAATGGATTTGGCATTACTCTAAGAATGGGGCTTATTCGGTTAAAAGTGGGTATAAATTGGCCATGATGTCTATTGATGGGCTGGGATCGACGAGTGATAATACTCAGAATCGTTGGTGGAATATGTTATGGAAGTCACAGGTGCCGTCTAAGGTCAAACTTTTTATCTGGAAGGCCTTCCATGAATGTCTACCGACTAATTTCTGTCTCTAG ATGATGGCTAGGTTCTGGTGGGGCTCAACGGATGCTAAAAAGAAAATTCACTGGAAGAAATGGGAGTTTCTTTGTGCTCCAAAAGAGGTAGGAGGGTTGAATTTTCGAGATATGATGAGTTTCAATAAAGCTTTACTTGCAAAACAGGTGACATCAGACAGATGTGAGGATAGGGTGGTGGCAGAATTTATAACCCCTACAAAGGAGTGGGATATAGCAAAGCTTCGAGAATATGTTCTAGAAGGGGATGTTAGAATCATCGCTACAATTCCTATTAGTTCGATAAACGATGAGGATAAATGGATTTGGCATTACTCTAAGAATGGGGCTTATTCGGTTAAAAGTGGGTATAAATTGGCCATGATGTCTATTGATGGGCTGGGATCGACGAGTGATAATACTCAGAATCGTTGGTGGAATATGTTATGGAAGTCACAGGTGCCGTCTAAGGTCAAACTTTTTATCTGGAAGGCCTTCCATGAATGTCTACCGACTAATTTCTGTCTCTAG MMARFWWGSTDAKKKIHWKKWEFLCAPKEVGGLNFRDMMSFNKALLAKQVTSDRCEDRVVAEFITPTKEWDIAKLREYVLEGDVRIIATIPISSINDEDKWIWHYSKNGAYSVKSGYKLAMMSIDGLGSTSDNTQNRWWNMLWKSQVPSKVKLFIWKAFHECLPTNFCL Homology
BLAST of Lcy05g017900 vs. ExPASy Swiss-Prot
Match: P93295 (Uncharacterized mitochondrial protein AtMg00310 OS=Arabidopsis thaliana OX=3702 GN=AtMg00310 PE=4 SV=1) HSP 1 Score: 60.5 bits (145), Expect = 2.2e-08 Identity = 28/49 (57.14%), Postives = 33/49 (67.35%), Query Frame = 0
BLAST of Lcy05g017900 vs. ExPASy Swiss-Prot
Match: P0C2F6 (Putative ribonuclease H protein At1g65750 OS=Arabidopsis thaliana OX=3702 GN=At1g65750 PE=3 SV=1) HSP 1 Score: 56.2 bits (134), Expect = 4.1e-07 Identity = 29/112 (25.89%), Postives = 57/112 (50.89%), Query Frame = 0
BLAST of Lcy05g017900 vs. ExPASy TrEMBL
Match: A0A803PYI0 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1) HSP 1 Score: 156.0 bits (393), Expect = 1.4e-34 Identity = 75/167 (44.91%), Postives = 103/167 (61.68%), Query Frame = 0
BLAST of Lcy05g017900 vs. ExPASy TrEMBL
Match: A0A803QA44 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1) HSP 1 Score: 151.8 bits (382), Expect = 2.6e-33 Identity = 79/204 (38.73%), Postives = 103/204 (50.49%), Query Frame = 0
BLAST of Lcy05g017900 vs. ExPASy TrEMBL
Match: A0A803QHJ7 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1) HSP 1 Score: 150.2 bits (378), Expect = 7.7e-33 Identity = 74/170 (43.53%), Postives = 102/170 (60.00%), Query Frame = 0
BLAST of Lcy05g017900 vs. ExPASy TrEMBL
Match: A0A803QAH8 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1) HSP 1 Score: 147.1 bits (370), Expect = 6.5e-32 Identity = 77/212 (36.32%), Postives = 104/212 (49.06%), Query Frame = 0
BLAST of Lcy05g017900 vs. ExPASy TrEMBL
Match: A0A803P3X4 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1) HSP 1 Score: 142.1 bits (357), Expect = 2.1e-30 Identity = 78/212 (36.79%), Postives = 109/212 (51.42%), Query Frame = 0
BLAST of Lcy05g017900 vs. NCBI nr
Match: XP_030509188.1 (uncharacterized protein LOC115723863 [Cannabis sativa]) HSP 1 Score: 146.7 bits (369), Expect = 1.8e-31 Identity = 75/203 (36.95%), Postives = 104/203 (51.23%), Query Frame = 0
BLAST of Lcy05g017900 vs. NCBI nr
Match: XP_030509336.1 (uncharacterized protein LOC115724021 [Cannabis sativa]) HSP 1 Score: 138.3 bits (347), Expect = 6.2e-29 Identity = 79/243 (32.51%), Postives = 105/243 (43.21%), Query Frame = 0
BLAST of Lcy05g017900 vs. NCBI nr
Match: XP_030505962.1 (uncharacterized protein LOC115720894 [Cannabis sativa]) HSP 1 Score: 138.3 bits (347), Expect = 6.2e-29 Identity = 68/186 (36.56%), Postives = 99/186 (53.23%), Query Frame = 0
BLAST of Lcy05g017900 vs. NCBI nr
Match: XP_030509050.1 (uncharacterized protein LOC115723712 [Cannabis sativa]) HSP 1 Score: 136.0 bits (341), Expect = 3.1e-28 Identity = 78/247 (31.58%), Postives = 110/247 (44.53%), Query Frame = 0
BLAST of Lcy05g017900 vs. NCBI nr
Match: XP_030479133.1 (uncharacterized protein LOC115696372 [Cannabis sativa]) HSP 1 Score: 135.6 bits (340), Expect = 4.0e-28 Identity = 80/243 (32.92%), Postives = 101/243 (41.56%), Query Frame = 0
BLAST of Lcy05g017900 vs. TAIR 10
Match: AT4G29090.1 (Ribonuclease H-like superfamily protein ) HSP 1 Score: 67.0 bits (162), Expect = 1.6e-11 Identity = 56/256 (21.88%), Postives = 89/256 (34.77%), Query Frame = 0
BLAST of Lcy05g017900 vs. TAIR 10
Match: ATMG00310.1 (RNA-directed DNA polymerase (reverse transcriptase)-related family protein ) HSP 1 Score: 60.5 bits (145), Expect = 1.5e-09 Identity = 28/49 (57.14%), Postives = 33/49 (67.35%), Query Frame = 0
BLAST of Lcy05g017900 vs. TAIR 10
Match: AT3G09510.1 (Ribonuclease H-like superfamily protein ) HSP 1 Score: 52.8 bits (125), Expect = 3.2e-07 Identity = 31/102 (30.39%), Postives = 52/102 (50.98%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
Relationships
The following mRNA feature(s) are a part of this gene:
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