Lcy05g017720 (gene) Sponge gourd (P93075) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTTGTGTGGATAGATTATAATATATTTAATCTTCTATTTAATTCATAATATTCTGCTTTCTTCTTGTGACTTTGTTTTGGTTTTTCATTTTTTAGGGGTTCTTTACCATGTTGTTTGCTGCAAAAGAGGACCCAAAGGATTATGGTGACCAATCAAGTTCTGTTACTTCTGTAGGTTGGGATAAACATGGGTGGTTTTATGTATCAGTCAGAATTGGATTCTTCCTTTGGGTATAAAAATCCTCTTATTACTTTGCATATGCATTCACTTTCAGAAAAGTGTTGAATTTGCCCTAAGCTTAATTGGTGAAAGTAATAGCTGCTTTTTTTGAAGGTTGCTTTACTTAATCTAATAACAATTTCATCAACTTGGGCTAGAGTTATTGATGTCATGGATAGTGAGGTATATCTTCAGTTTCAGCCACATTTTATATGGATGGTACTTGCAAAATTTTGGGTCATGTTTAACGTGGGTTTTTCTTTTTCCAGTCAGGTGCAAGATTATTTGGGTTCATAGGTGCTGGAGCCACACTCGGCGAGCTTTTCGGTTCCCTATTTGCAACAGTAATAGCCTGGTTAGGGCCCTGTATGTCTCCCTCCCTCTTTACTTTTTAAAAAAATGCAATCTTGCTATTATTTCCTCTTGTTAGGTCAATAACATAGGTCTGTCTGTCTTTTCCTTCCTCTTATTTTCAATCTGTAAGTTTGTATTCCATGAGCATTAGTCTCTTTTCATTTCTTTCATGAAAAATTTTGTTTCTTGTTAAAAAAAAGAAGATTGGGTGATAAAAGTACTATGACTGGTGTTATGGAGGCAGTAGCCTAATCTAAAATCACATGTTCCTAAAACTTTCGCTTTCTGCTGTTTTGGAGGGTCTCTTTTAGTCTTATGCTTGAATTTGTTTCTATTTCTTAATTCATCTATCTGGTTTTGTTGGTAACAGCTACTTTGATACCATGAAGAAAGATTTCAATATGTCAAGTCATGTCAAGCACTATGCATGTGCTGTTGATCTCCTTGGTCGAGCTAGAAGGTTGGTCAATGCAGAAAGTTTAATTTTGTGCTCAGGTTTCAAGCACGAACCAATGGGGAGAATTTGTTTGTATAATCTTTTATGA ATGGGGTTCTTTACCATGTTGTTTGCTGCAAAAGAGGACCCAAAGGATTATGGTGACCAATCAAGTTCTGTTACTTCTGTAGGTTGGGATAAACATGGGTGGTTTTATGTATCAGTCAGAATTGGATTCTTCCTTTGGGTTGCTTTACTTAATCTAATAACAATTTCATCAACTTGGGCTAGAGTTATTGATGTCATGGATAGTGAGTCAGGTGCAAGATTATTTGGGTTCATAGGTGCTGGAGCCACACTCGGCGAGCTTTTCGGTTCCCTATTTGCAACAGTAATAGCCTGCTACTTTGATACCATGAAGAAAGATTTCAATATGTCAAGTCATGTCAAGCACTATGCATGTGCTGTTGATCTCCTTGGTCGAGCTAGAAGGTTGGTCAATGCAGAAAGTTTAATTTTGTGCTCAGGTTTCAAGCACGAACCAATGGGGAGAATTTGTTTGTATAATCTTTTATGA ATGGGGTTCTTTACCATGTTGTTTGCTGCAAAAGAGGACCCAAAGGATTATGGTGACCAATCAAGTTCTGTTACTTCTGTAGGTTGGGATAAACATGGGTGGTTTTATGTATCAGTCAGAATTGGATTCTTCCTTTGGGTTGCTTTACTTAATCTAATAACAATTTCATCAACTTGGGCTAGAGTTATTGATGTCATGGATAGTGAGTCAGGTGCAAGATTATTTGGGTTCATAGGTGCTGGAGCCACACTCGGCGAGCTTTTCGGTTCCCTATTTGCAACAGTAATAGCCTGCTACTTTGATACCATGAAGAAAGATTTCAATATGTCAAGTCATGTCAAGCACTATGCATGTGCTGTTGATCTCCTTGGTCGAGCTAGAAGGTTGGTCAATGCAGAAAGTTTAATTTTGTGCTCAGGTTTCAAGCACGAACCAATGGGGAGAATTTGTTTGTATAATCTTTTATGA MGFFTMLFAAKEDPKDYGDQSSSVTSVGWDKHGWFYVSVRIGFFLWVALLNLITISSTWARVIDVMDSESGARLFGFIGAGATLGELFGSLFATVIACYFDTMKKDFNMSSHVKHYACAVDLLGRARRLVNAESLILCSGFKHEPMGRICLYNLL Homology
BLAST of Lcy05g017720 vs. ExPASy Swiss-Prot
Match: Q9LRV9 (Pentatricopeptide repeat-containing protein At3g13880 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E89 PE=2 SV=1) HSP 1 Score: 57.8 bits (138), Expect = 1.3e-07 Identity = 25/48 (52.08%), Postives = 34/48 (70.83%), Query Frame = 0
BLAST of Lcy05g017720 vs. ExPASy Swiss-Prot
Match: Q9M2Y7 (Pentatricopeptide repeat-containing protein At3g49710 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H79 PE=2 SV=1) HSP 1 Score: 46.6 bits (109), Expect = 3.0e-04 Identity = 20/44 (45.45%), Postives = 28/44 (63.64%), Query Frame = 0
BLAST of Lcy05g017720 vs. ExPASy Swiss-Prot
Match: Q9LXY5 (Pentatricopeptide repeat-containing protein At3g56550 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H80 PE=2 SV=1) HSP 1 Score: 46.2 bits (108), Expect = 3.9e-04 Identity = 19/48 (39.58%), Postives = 30/48 (62.50%), Query Frame = 0
BLAST of Lcy05g017720 vs. ExPASy Swiss-Prot
Match: P0C8Q8 (Pentatricopeptide repeat-containing protein At5g19020, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-E42 PE=2 SV=1) HSP 1 Score: 46.2 bits (108), Expect = 3.9e-04 Identity = 19/38 (50.00%), Postives = 26/38 (68.42%), Query Frame = 0
BLAST of Lcy05g017720 vs. ExPASy TrEMBL
Match: A0A0A0KSH9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G218820 PE=4 SV=1) HSP 1 Score: 183.3 bits (464), Expect = 7.5e-43 Identity = 87/96 (90.62%), Postives = 93/96 (96.88%), Query Frame = 0
BLAST of Lcy05g017720 vs. ExPASy TrEMBL
Match: A0A5D3DQL4 (TLC ATP/ADP transporter OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold436G00270 PE=4 SV=1) HSP 1 Score: 183.0 bits (463), Expect = 9.8e-43 Identity = 86/96 (89.58%), Postives = 94/96 (97.92%), Query Frame = 0
BLAST of Lcy05g017720 vs. ExPASy TrEMBL
Match: A0A1S3C4A2 (uncharacterized protein LOC103496722 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103496722 PE=4 SV=1) HSP 1 Score: 183.0 bits (463), Expect = 9.8e-43 Identity = 86/96 (89.58%), Postives = 94/96 (97.92%), Query Frame = 0
BLAST of Lcy05g017720 vs. ExPASy TrEMBL
Match: A0A1S3C4Z1 (uncharacterized protein LOC103496722 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103496722 PE=4 SV=1) HSP 1 Score: 183.0 bits (463), Expect = 9.8e-43 Identity = 86/96 (89.58%), Postives = 94/96 (97.92%), Query Frame = 0
BLAST of Lcy05g017720 vs. ExPASy TrEMBL
Match: A0A6J1J6F0 (uncharacterized protein LOC111483001 OS=Cucurbita maxima OX=3661 GN=LOC111483001 PE=4 SV=1) HSP 1 Score: 181.8 bits (460), Expect = 2.2e-42 Identity = 87/96 (90.62%), Postives = 93/96 (96.88%), Query Frame = 0
BLAST of Lcy05g017720 vs. NCBI nr
Match: XP_038892756.1 (uncharacterized protein LOC120081729 isoform X1 [Benincasa hispida]) HSP 1 Score: 186.8 bits (473), Expect = 1.4e-43 Identity = 90/96 (93.75%), Postives = 94/96 (97.92%), Query Frame = 0
BLAST of Lcy05g017720 vs. NCBI nr
Match: XP_038892757.1 (uncharacterized protein LOC120081729 isoform X2 [Benincasa hispida]) HSP 1 Score: 186.8 bits (473), Expect = 1.4e-43 Identity = 90/96 (93.75%), Postives = 94/96 (97.92%), Query Frame = 0
BLAST of Lcy05g017720 vs. NCBI nr
Match: XP_011655029.1 (uncharacterized protein LOC101212005 isoform X1 [Cucumis sativus] >KGN50360.2 hypothetical protein Csa_005788 [Cucumis sativus]) HSP 1 Score: 183.3 bits (464), Expect = 1.6e-42 Identity = 87/96 (90.62%), Postives = 93/96 (96.88%), Query Frame = 0
BLAST of Lcy05g017720 vs. NCBI nr
Match: XP_008456914.1 (PREDICTED: uncharacterized protein LOC103496722 isoform X2 [Cucumis melo]) HSP 1 Score: 183.0 bits (463), Expect = 2.0e-42 Identity = 86/96 (89.58%), Postives = 94/96 (97.92%), Query Frame = 0
BLAST of Lcy05g017720 vs. NCBI nr
Match: XP_008456913.1 (PREDICTED: uncharacterized protein LOC103496722 isoform X1 [Cucumis melo]) HSP 1 Score: 183.0 bits (463), Expect = 2.0e-42 Identity = 86/96 (89.58%), Postives = 94/96 (97.92%), Query Frame = 0
BLAST of Lcy05g017720 vs. TAIR 10
Match: AT5G05310.2 (TLC ATP/ADP transporter ) HSP 1 Score: 131.7 bits (330), Expect = 5.0e-31 Identity = 63/98 (64.29%), Postives = 76/98 (77.55%), Query Frame = 0
BLAST of Lcy05g017720 vs. TAIR 10
Match: AT5G05310.1 (TLC ATP/ADP transporter ) HSP 1 Score: 128.3 bits (321), Expect = 5.5e-30 Identity = 61/98 (62.24%), Postives = 75/98 (76.53%), Query Frame = 0
BLAST of Lcy05g017720 vs. TAIR 10
Match: AT5G05310.3 (TLC ATP/ADP transporter ) HSP 1 Score: 128.3 bits (321), Expect = 5.5e-30 Identity = 61/98 (62.24%), Postives = 75/98 (76.53%), Query Frame = 0
BLAST of Lcy05g017720 vs. TAIR 10
Match: AT3G13880.1 (Tetratricopeptide repeat (TPR)-like superfamily protein ) HSP 1 Score: 57.8 bits (138), Expect = 9.2e-09 Identity = 25/48 (52.08%), Postives = 34/48 (70.83%), Query Frame = 0
BLAST of Lcy05g017720 vs. TAIR 10
Match: AT3G49710.1 (Pentatricopeptide repeat (PPR) superfamily protein ) HSP 1 Score: 46.6 bits (109), Expect = 2.1e-05 Identity = 20/44 (45.45%), Postives = 28/44 (63.64%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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