Lcy05g017660 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy05g017660
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	Reverse transcriptase domain-containing protein
Location	Chr05: 31157086 .. 31168329 (+)
RNA-Seq Expression	Lcy05g017660
Synteny	Lcy05g017660

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GGTGACAGAGTCAAAGTATTCATGTACCCCCGTAACATTTGAGGTTTGAGGTGACTAGCTTCTTTATATGTTGGAAACAAATTTTGATTTTTTTCCTCTATTTTTTATCCCTGGTATGTTTTGATGCTATTACGACTTCTGTCTGTCTTTGGAGTCAAAGCGAATTAGTTTAGTTTTCTAACTTAGTTGGTAGTCCATCAATGTGGGATGGCTGCATGCCTTTGCCAAAAGGTCTCGTCATTAGAAGGTCCGTTGCTTGCATTCATTTGATATAGCTCAGTTAAAATTTTGCATTTGATAAAATAGATCCTTTCTTTTAACCAAGTATTTATGGGTCCATAACGCTTTTGTTATCTCCTTTACTTTGGATCTTCTTCAAACTACCAAATGTTGTCCCCAGTTTGTAAATTGGTGATAGAAAGGGTTGAAGGATGGGTGGGTAGTAAAAGATGGAGAATGCAGCTTGTGAATTTGGATGCATTTTTTCGATGAATAGTTTAGGGTTATTTGACAGAAGTTATATGAATTGACAGGCAGTTGCCTCTGTTTTAACGGTTTTACTAATCATGTTTTGACCAATTAATCAATCCTAAACTATTTGTTTGCCATTGGTCATTGTCGTGTTTTTCTTATTGGTAGTTTTTTGTATTGTCGTTGGCAATGTTTGAGTTTTAGGAAGAAAAATTTTATAGGTTGGGCCAACCTTTGTTTTGTTTTTTTAATCAAATTATAAGTTTGATTTTGGTTCTTAAACTTTTAGACTTTCAAAGATGTGTGTAGTTACATTCTATAGCTTAAAAAGTTTAGATCCTACTCTTTTAGGGTTGTGTCTATAAATATATTTAACCATAAACATTAAAGAAATAAATCATTCAAAATCTCAACCATCCTATTCGCTTTGTAACGAAACATGAATTGCTACATTACAATACATAATGTGAATACAAAATTCACATTGTCGCCTAGAAATGGAATCAGGTGGATCTAAAAATGAACATACAAAACCTTTCAGATTTGAGAATTGTTAGCTTGATGTGCCCAAGTTTGTAGATGGTGTCCCTTGGGTGAAAAATATTGAATGGCAATCTTAAGCCCAGTCGTCGTTGTTGCTTTTTTAAAATTTATTTAGGTAAAGGTATTAAATCTGTTCTTAAAGACTTTCAGTTGGCCAACCTTTGGTTTCTTCGATTTGGGGGGAACTGTTGGTTTGCTTTGTTTTTTTCTTCTTCCTTTCTCTTTTTTCTTTCTTTTTCTTTCTTCTTTTTTACTTTTTTCCAGAGAGAATTTTGTCTCAAGGAACTATGGGACTCAATTTGACCTTTTGCATGTATCTTTTGTTCTTTGTCTAGTGTTTTCTCTCTTACCTCTCTAGAAATTATGATATTACACATATTATGACCATCTGGGAGTCCTTTTATGTTCAATTGCTTTGCTGGTTTCTAAAAGCTACATATTCTTGATGCTCGATAAATGTAGGACGAAGGCCATCTCTCTCGTCGTTTATTTACTTAGATATGATATTCTAACTCTGGTTCTTCCATGTATTCATCCTTCAAAGCCATTATTTTTCCCTTTTATATATATATATATATATATATATATAAACTTTGCAAGTGCATTCATTCTCTCTTGATGTTATTCTTGTGAACACGTGTAGAATTGTTACATTTTACACAACAGAGCCTCCAGCTTGTGAGCCTGTGTTGTCACCTATATGGCTGAGTTTTTAAATGCTGCCTGACTTCACGCATAAATATTTTATAATCTTTATGTACATTAATTATTATGGACCTTAGAATGTTGATTATGTCTTGTGCATGTTATTTTTGTTTTTCTATTAATGGAAATTCTTTTCATTCCTGTTGGGCTTCTTGTCCTTCATGCTTCCTGCATTGTAAGTGTTCTGTATAGATGTTGAAACATTAAGCTTCAACTGTTTCTCTTTTATTTGGCTAGATAAATTTATGATTAGCTATATAATTAATACATCTATGTACAGTAAAATACAACCTTATCTAGAACCTTATCTAGAGAGAGACCTATGGAGCATCTGTTGGTGGGCGTTGTAGGGATAGGAGAAGAAGACAAGAGCCTACAACCTTACCCATGCTTTTAAATGTTTTCTACTACGATTTGGTGGACGTTGTTTGGTATGTCCTCATGCATCTTTTAGTCTTACTTCTCTATCTATTCAACTCATTCTTTTACTTAGTAGTATTAAGTGATAATTCAACTCATGCTTTTTCTGTTTAGGAAATGCAAAGGGACGTTTGATAACCAATTGGTTTTCTGTTTTTAAAAAACAAGTTTATTTGGAACATGTGTTGTTTATATAAATATTAATATGAATTATAAGAAATTATTTGATTTTACTTTTATAAAGAAATATGAAACGAAGAATAATTGTCATTTGTTTTTTAGGAAACAAAAAACCAACCTACACTATCCAACATGTTTGGTTTTTTGTTTTCAAAAAAACAAAAAAAAAAAAAGAGATTGTTTCCGAACCAAGAACGAAAAACAGAATATGGAAAAACCAAAAACTAAAAATCAAAATGATTATGAAAAGTTGCCTTAGTTTTCTACTTTTAGAGCATTCTTTTTATGTTGGAACTCGAGTTGATGTGATATTTGTTGCCTAGAAATTTCTATGCCAAGGATTTTGTTGCATTGAAGCTAAAGCTCACCTGTGTAGATTGTGAGCTTAAACTGTATGATTTTTTTTTTTTAAATTAAATTGGTGAGGGTGGGCATTTTAATTTTGTTCATATATGCGATGTGGTTTGCAAAATTGACTGTTTAGGCATATTTGTGGCATTAGATCAATTTGTAAAAGCTCATTTGGGTATAGGTTATGTATGTAATTTTTTTTAAGATCCCAACTCAAGTAACCGACTTGTTGCTGCCTCAATTTCAAAGTAAACTCAAGGCTCGTCATTCACATCTCAAAGTTGTAAGCACAAATGTTTATAAGAGTTAGAAGTAGCGGAAGGTATGATCAACAGTTGTGGCCCAAAAGGAAAAGATATTGAAGACCAAGATATGTCTTGGATTTAAATTATTGTAATTTAATTAATTATCAATTTCATACGATATGCCAAATATGCCGGCATATCTTGGTCATACCTTCCGCTACTTGGCATATCGTACGAATTTGATAAATATTTAAATTACAATAATTTTTAGGGTTTGGGGTTTGGGGTTTAGGGTTTAGGGGTTAGGGGTTAGGGGTTAGGGGTTTGGGTTTCAATCCATATAATGATCTCTGGAACTTTATTGAACATAATTCTCGAGAATTTGATTTATATGTCTCAGGTACCTTAAATCTTTCTGGGATTCTCATATAAATATTATTATCGAAAGATTCATATAAGTATGCTGCGACAACATCCATGAGATGCATGTCCAGACTTTCATACATAGTCAGACTAATTAAAAATCTTAGTGTTATTACATCTACCACTGGAGAATACGTCTCCTCATAATCAATACTAGGTCTTTGTGAAAAGTCTTGTGCAACTAATCTTGCTTTATATCTTGTAATCTCATTATTTTCATTTCTTTTTCTCACAAATACCCATTTGTATCCCACAGGTTTGACAGGTGTTTGGAATACTGGTCCAAAAACCTGACATTTTGAAAGTGAATTTAATTCTGCCTTGATTGCTTCTTTTCACTAAATCCAATATTTTCTATGTCGACATTCTTCAACAGATTTTGGTTCAGGACCCTCATTCTCATATATAATATCAAGAGCAACATTATATGCAAAAATGTTGTCAATAATTACATTAGTTCGGTTCCATTTTTTTTCTTGTCATGATAGTTTATGGAAATCTCATTATTATCTTCAGGTATTTCACCTTCCTCACCATTCATGTCATGAATTTCTTCATGGGTATTTACATCCTTAACCAAGTCTTTTTGACTATTAATTATTTTTCGTTTTCGAGGATTTTTATCTTTGGAATCCATTGGTCTACTACGCTTCTGACGGGTTCCAGATTCATTAATGACAACATGTTGCGTTGGGATATCAATTTTTGATGGGACATTTGTGTATGTGACTTAGTCACTTTCTTTGCATCTATAAATGCATCTGGTGCCAAAGCGAGCTTAGCTCAGCGGTAATTGGCATGTACCCTTGACCATGAGGTCAGAGGTTCGAATCCCCCCACCCCCAAATGTTGATGTATTAAAAAAAAAATAAATGCATATGGTAATTGATTTGCTATATTTTGGAAATGAATTATTTTCTGAACTTCAAGTTCATATTGATCTTGGGGATCTAAATGAGACAATAATGATGCATTCCATATAATTTTTTTCCAACTTCTTAATTCCTCTCCCTAATATTGGAAAATTTGTCTTATTAAAATGACAATCATCATCATATGGCTGATGGGTTTGCCTCGATTTTTGTCCCTTTCATAATTTCAAGCTAATCTTTTTTTTTTTGGGCTAAATCTTTGAATTTTGTTACGCATTTGATTTTTTGTTGTTGAATTTGTTATGCAGACTTTCGTGTCACTTTTTCATAAAATAGATTTTGTTGGGATACTGTGTGTTTCTTTTTTTTATAAGAATGCATCATTCCTTGTATTGGTTTATTGTTAGATAGCCATAGCTTCCAAATGCCAGTTACTTCTTGATCAGTGTAAATTCACTTTCGTTTATTAGTTTTTTCTTTTCTTCCTCCGAATAATCTTGGAAGGGAGGAGAAATGTGGTTTTTCTTCTATATTTTGATAAGTTAGAATGAGAAGGTTCCATAATTATCAGTACACTTGTTTTAATTTTAATGGTGTGTATGTATATATCTTTCATCATTGGGTTGTTGGGCCACATTCATTACATTATGTTCGCGGTTTTTTTCAGGAGGCTTCACCCATAAAAAATTCGAACTCTAAGAGACAACAAAGGTTTTAAATTATTTTAGTTTTTGATTTATAAGATTAGAGCAGTCTGTTTTAAGTGGTATCCCTATTTATTTCTTTTCCCTCTTTAGAGCCCCTTGTTCGGTTTGTAAAGTAATTGAGAAGTTGATGAGGGACTTTTTATGGGAAGGGGTGGATGAGGGTAAGGGTTCGCATCTGGTGTGCTGGGATCTTGTGGGGCAATCCTTAAGGGAGGGGGGCTAGAGATAGGTAACTTGAGGATACGTAACAAGGCTTTACTGGCAAAATGGCTTTGGAGGTTCTACTCGGATTCCAACACCCTTTGGCATAGGATTATTGTTAGTAAACACGGGCCCCACCCTTCTGAATGGGTAACGGGGGGGATCAAAGGCACTTTCAGAAACCCTGGGAGAGAAATTTCGCGTGAGCTCCCTTCTTTGGCCTCTTTTATTCATTGCTCGGTGGGGAATGGGGAGGACACTTATTTTTGGGAGGATAGATGGGTGGGGGATAGACCCCTTTGTGTTACCTTTCCTCGGCTCTATCATCTTTCTTCTATGAAAAATCATTCTGTGGCCGAGGTTCTGATTCATTCAGGGAGCTCTCTTTCTTATTGCTTTGGCTTTGCGCGTCCGTTGTCTGATAGTGAAACAACGGACCTCGTGACTCTCATTTCTTTGATTGGGGAAATCGCTTTTAGTACCACTAGGAAAGACATTCGAGTCTGGAGTCCCGACCCTTCCCTCGGGTTTTCTTGTCGATCCTTCTTCCGATGCCTTTTGGACCCTGTTTCCTCTGAGCCGTCCATTTTCTCTTTATTGTGGAAGGTGAAAGTTCCAAAGAAGGTGCAGTTTTTTATTTGGCAGGTGATCCATGGAAGAGTTAATACTCTTGATCGGCTGTCCAGAAAGATTCCTAGTTTGTTTGGGCCTTTTGTTGCATTCTTTGCCGGATGGTGGAGGAAGACCTCGATCATATGTTATGGAACTGCGCTTTTGCTAGGACAGTGTGAGATGAGTTCTTTGGCTCGTTCGGGTTGCAGTTTGCCAGGCATAGAGGCCTCAGAGAGACGATCGAGGAGTTCCTTCCCCATCCTCCCTTTAGGGAGCAAGGAAAGTTTTTGTGGCAAGCGGGGATTTGTGCTATTATTTGGGGGTTGTGGGGTGAGAGAAACAATAGAACTTTTAGAGGGTTAGAGAGGGATCCTATTGAGGTTTGGTCCCTTGTTAAATATAATGTTTCTCTTTGGGCGTCGGTGACTCGTTTATTTTGTAATTATTCCTTAGGTCTCATCATTTTGGATTGGAGTCTCTTCATTTAAAGGGATTCCTCTTTCTCGGGCTTGTTTTTTGTATGCCCTTGTATTCTTTCATTTTTTCTCAATGAAAGCATGGTCTTTTATAAAAAAAATAAGATTAGTGCAGTCTATAATGAAGCAGTCTATAAGATTAGAGCGAGGATGAAAACAGCTCAGGACAGGTAGAAGAGTTATGCAGACACCAGACAGAGACTTGGAATTTGCAGTCGGCGACTTCATGTTTTTGAAAGTTGCATCGATGAAAGGAGTTTTGAGGTTTGGAAAGAAAGGGAAGTTAAGTCCCGGGTTTATAGGGTCATTTGAGATTTTGAAGAGAACTGACCCTGTGGCTTATCGTTTGGCTTTGCCACCATCCCTCTCTTCAATTCATGATGTATTCCATGTGTCTATGCTGCAAGGATACATGTTGGACCCGTCTCATGTGTTTGATATTAAACTTTGAGGTTGAGTAAGGACTAAGTTGTGAGATTAAGCTAGTTCGAATCATTGCCAGAGATCAAAAGACTTTTTGTAACAGAGAGATAACACTTGTCAAAGTGCTTTTGTAGAACTACTAGATTCAGGAAGCAACTTGGGAAAAGGGGAGATGAGATGAGGATCAAATACCGAGAGTTCTTCTAAGACTAGCAACTTTCGAGGACAAAATTTTTTTTAAGGAGGGAAGATTGTAACGCCCTTAAATTCGAGTAAATGTCAAATTCTCGAATTTCAAGTTTATTTGAGCAAATTTTGAGTTAAAATTCTCGAAGGTAGTTTGGTGAATTTTTCTTGAATTAAAGCTTGGATGGTAAAGTTGTAATTTATTGGTCTTTTGAGCCAAGCCAATCCTAAATTTTATATTATTTTAAGAGCCTCACGCAGCCCAAGGTCTAGCCATCTAGCCTCCAAAGACCATCTTCTTCCTCCCTTCACTTCCTCCATTGCCGTGAAGCTCCCTCACCACATCCATCTTCTTTTTCTTTTGTTTCCGTCGCGGGCCAGCCGTACCTTTCAACTCCGACCCTTTCCTCCAACGAGCAATGGCGATGTGGTGGCGGTTTAGCAACAGTTCGACGGCGTGGGTTGCAGCGACGTTCGACGCAATTTTGGGTAAGTTCCTCACGGGTTTTTCTCCTTTTAGGCCGATTCCTCTCCCTCTTTAGTTTTCTCCCTCACTCTCGGCCTCTCTCTCTCAGTTTCCAGCTTTTTTTTGGTCGGACAACAGCTTTTTCCGGCCGGTTCGGTGTAGACGCGCGAGCAGCAGCTGTTTGGGGCGTTTTTCAGCGTTTTCGGCGAGTTTTCAGCGTGGGCAAGTGAGATTTAAAATGTTTTTGGTCAATTTTATGTTTGATCAAGGATACCCATTGATATTAGCTTTCAATTTCAAGGTACCCATAATATTTTGGAGGTTTAATTGTTGTTTTGGAGTGGATTTGGAACCCAGACAGCAAGCTGTGTTTCAGTTTTGGGTGTTAAATCACCCCCAAATTTAATGGGTTCCTAGTTGTATGCTTGGATTAAAGTCCCTATTTATTTGGGAGGTTCATTCCTTTTTGTAGTTTGCTTAAGGACCTTGGAGCTAGAGTATTAGTTGGATTCTATCAAGCAAATTATTTGGCTTAAGTAGCTATTTGGATTCAAATTCTATGCCTTAGACCCATTGCATGATAATTTGCCCATTGTTTGTTAATTGGGAATTTAAAGTGGCTAGTTGGATTAAGGTTCCATTCTTTAGACCCATTGTATTTGTGAATAATATATGCTAGCATGAATTGAAATCCTTAAGTTGGTCTTTAAGTCTAAGTACGTGTGTTGGGTTAACTTTTGAAGCATGATGAGATTGTGAAATTCAATGGTTAAATGATGAGCATGTTGAGATTGCCTTTAGGTGGGCATTAAATGAGTAGCGTGGATTATGGAATAATTGGAGTTTGGGCTAAGTGTTGTTTGATTGTGTTGAAACCATGAATTTCATGTTTTATTTGGTTAGCCATGAACTGAAATGCTTGGAATGATTTTATGGTGGTCTGACTGCTGTTTATTGTTAAAGTGAAGTTGTGTTCCAATTTAGAAGTGTGAGTTTTTCTGCGTTTCAGATGTCTGCAATTTTTGGGATAGTTGTAGTTATGCTGTTATGCTGTCGAATTTTCGGTAGCTTTATAATAGTTAACGGGGCTAAGTTTAGCAATGTCCTTTGGATTATGATGTGCTGATATTGACTGACCGATGAGTATAGTCCACAGATTCTCCAAACATGTTTTAGTATGACTTATTGAGAGCCATACGAATGAATGAGAATAGACTCTGAATAGAGACCTTAATCATGTTTTAGGGCCTCAGGTAGACTTAAAGGATCCTTAAGTCTTATGTTAGTTAGGGTTATTTCTTTCCCCATCTTAGGACTGATGGAACCCAGTTTTCAGACACGGGATCGTGCATTCTATCATTGACTGGTAGATTTCAGTTTTCAGGCACGAGATCGTGCATTTCATCAGTCGACTGTTAGAGTCCAGTTTTCAGGCACGAGATCGTGCGCTCTATCAGTCTCAGGACGGTGTCGAGCACAGACACGAGATCGTGCGCCAGATGGCACTCAGGCATGTTTTCATGCACCTGATTGCTCCACTGTATTTTCATGATTCAGAGGTGTTGTGTTGGGATAGGTGTAGTTCTGCTAGAGGTTGCCAGCTAGTCTCTAGTTTACTTGTCTTACCCGATTGACCAACACAACACTCTAGTTGGCACAGGTTGGGGATAAGTAATCACCCTAGACAGAACATTTCATAAACCCAATTATGGCTCTAGGGTTAGAAACCCGAATGATTGTTTTAGTTAGGTCCCTATGATGTTAAGAACCAAATTCAAGTTTCATGTTATAAGATCTCATGTTATCAGTTTTAACCCTTCAGTGGGCTACTTACTGAGTATATTCTTATATACTCACCCATGCTACATAACTTTCCTTTCAGGTGGTACTTGATGACATCAAGCGAGTGGCGAAGGCAATGACTTGGTTAGGTTATGGGAATGCAGTTGCAAATCATGTTCCTAAAAGTTCAGGAACGAGTTTCCTAGCTTCATGTTTTCAAATGTTTTTGATGTTTAATTTTATGAAAATTGTCTAATATCGTTTTTGACTGTTCGTTTAATGTCAAATGACTTACGCTTTTGGGCTCAGTTTATTAAATAAAATATTTTTACTTGTAGTCTCTTCTGCTTTAAAGTTTCAAAAGTCTTACGCGCTCATGTATGTAGTAGCGATCCTCAATATGTTTTTAGCTTCCTTCTAGTCGGGTTGTTATAGCTTATGACGGTCTTGTGCTGATTAGTTTTTTACTATCAGCGCAAAACAAAAACATAAGCTACACTCTTGCCATCCTGTCTTTTGAGTTTTCCTGTAGAAAATTTGAGGAAAAACTATCCATGTTATGGCAGATATCTAAATCACAGCATTATGCTAGTCTTCAATTATCTGGCTGTTGTTTATGTGCTTATGGACGGTCTTGTGCCGATTAATTTACCGCTATCGGCACATAACAAAAACCTAAGCTACACTCTTGCCATTGTGTCTTTCAAGTTTCCCTCTACAAAGTGAGGTGAAACTATCTATGCTATGGCATATATGTATCTTAACACACATCTCAAGCCTGTTGATAATTTTGTAGTTGTCAGTCACAATGTGCTTATTGTGACAGTCTTGTGCTGATCAATTTGCCATGATCAGCACACAACAGGAACATTAGCTACACTATTGCAATCATCATGCCTTTCAAGTTTTCCCACGGTTGTCCGAGGAAAAGCAATCCTGTCTCTTGTCTGTTTCTGTTTATGTGACTCAGTTGCAACTTGCAATGTTTTTATAGATGGCCCTGTGCTGATTAATTAATTTTGTTGATGCCGACTCTTGCATCTGGTTGTTAGTTATAGGAGTTTTAGGAATCTCCTCTTGCTTTGGATAAAATTTGGAACAAAAGTTTTTTTGAAATTATGCTGTTGTTAGTGTTCATCTGGTTACTGGTTTGTCTTGTTTCAGAACCAGTATCTGTAAGCCAAGTTTTTTTTCCCATATGATCTATAAAAGTCTTACCTTTTTTTTTTTGTTTTTTTTTTATTATTTTTTTTATATTACTTTTATATGAAGAAAAACGTAGCTGCCTTAATTCTTTTTTTAGATTATACTATTTATATACATCTATGTTACCTGAAACGAATGTGCTTATGGACGGTCTTGTGCTGATTAGATTGTTAAGCCATCAGCACACAACAAAAACCTAAGATATATTGTTGCCGCATTGTATAAATGAATGTGCTTATGGACGGTCTTGTGCTGATTAGATTGTTAAGCCATCAGCACACAACAAAAACCTAAGCTATATTGTTGCCGCATTGTATAAATGAATGTGCTTATGGACGGTCTTGTGCTGATTAGATTGTTAAGCCATCAGCACACAACAAAAACCTAAGCTATATTGTTGCCGCATTGTATAAATGAATGTGCTTATGGACGGTCTTGTGCTGATTAGATTGTTAAGCCATCAGCACACAACAAAAACCTAAGCTATATTGTTGCCGCATTGATCTCTAGTTTATTCTCAATTTTATATGATGGAAAACTTTCTACATTGTGGCTACATGTACTCACCCCTGGTTCACTCTTAAATAAAAATAAGCGGCATGGATGCCTCTTTACTCCAGCCTTGGATGAAATTATATTGGAGGATGAATTAACACATTGAACATTTGTAGTTTTATTTTTTGGGATTTGTCATTGGTGTTTCTTTTCCCTCTGCATCCGTTGTCTCCCAAAGACCATTTTATTTTGTGAAGTATGATTGTATTGTAGCTTTCATCGATATATCTGATGAGCTTGGTCTTCATCCTTATGGATCGTGTTGGTACTTGGATAAAGGCTGTCTCCACTGCTGGTGTTTGTTTGCAGGCATATACTAAGAAACACCCTTCTGAAGAAGGGTTATTGTCCAGTTTTTACACCGTGCTAGTTGGTTCGTCGATAAGACTATTATTAGCTCAGGAAGAAAGTCCTTGTTGA

mRNA sequence

GGTGACAGAGTCAAAGTATTCATGTACCCCCGTAACATTTGAGGGAGGGGGGCTAGAGATAGGTAACTTGAGGATACGTAACAAGGCTTTACTGGCAAAATGGCTTTGGAGGTTCTACTCGGATTCCAACACCCTTTGGCATAGGATTATTGTTAGTAAACACGGGCCCCACCCTTCTGAATGGGTAACGGGGGGGATCAAAGGCACTTTCAGAAACCCTGGGAGAGAAATTTCGCGTGAGCTCCCTTCTTTGGCCTCTTTTATTCATTGCTCGGTGGGGAATGGGGAGGACACTTATTTTTGGGAGGATAGATGGGTGGGGGATAGACCCCTTTGTGTTACCTTTCCTCGGCTCTATCATCTTTCTTCTATGAAAAATCATTCTGTGGCCGAGGTTCTGATTCATTCAGGGAGCTCTCTTTCTTATTGCTTTGGCTTTGCGCGTCCGTTGTCTGATAGTGAAACAACGGACCTCGTGACTCTCATTTCTTTGATTGGGGAAATCGCTTTTAGTACCACTAGGAAAGACATTCGAGTCTGGAGTCCCGACCCTTCCCTCGGGTTTTCTTGTCGATCCTTCTTCCGATGCCTTTTGGACCCTGTTTCCTCTGAGCCGTCCATTTTCTCTTTATTGTGGAAGGTGAAAGTTCCAAAGAAGGTGCAGTTTTTTATTTGGCAGGTGATCCATGGAAGAGTTAATACTCTTGATCGGCTGTCCAGAAAGATTCCTAGTTTGTTTGGGCCTTTTGTTGCATTCTTTGCCGGATGGTGGAGGAAGACCTCGATCATATGTTATGGAACTGCGCTTTTGCTAGGACAGTGTGAGATGAGTTCTTTGGCTCGTTCGGGTTGCAGTTTGCCAGGCATAGAGGCCTCAGAGAGACGATCGAGGAGTTCCTTCCCCATCCTCCCTTTAGGGAGCAAGGAAAGTTTTTGTGGCAAGCGGGGATTTGTGCTATTATTTGGGGGTTGTGGGATTTCAGTTTTCAGGCACGAGATCGTGCATTTCATCAGTCGACTGTTAGAGTCCAGTTTTCAGGCACGAGATCGTGCGCTCTATCAGTCTCAGGACGGTGTCGAGCACAGACACGAGATCGTGCGCCAGATGGCACTCAGGCATGTTTTCATGCACCTGATTGCTCCACTGTATTTTCATGATTCAGAGCTTTCATCGATATATCTGATGAGCTTGGTCTTCATCCTTATGGATCGTGTTGGTACTTGGATAAAGGCTGTCTCCACTGCTGGTGTTTGTTTGCAGGCATATACTAAGAAACACCCTTCTGAAGAAGGGTTATTGTCCAGTTTTTACACCGTGCTAGTTGGTTCGTCGATAAGACTATTATTAGCTCAGGAAGAAAGTCCTTGTTGA

Coding sequence (CDS)

GGTGACAGAGTCAAAGTATTCATGTACCCCCGTAACATTTGAGGGAGGGGGGCTAGAGATAGGTAACTTGAGGATACGTAACAAGGCTTTACTGGCAAAATGGCTTTGGAGGTTCTACTCGGATTCCAACACCCTTTGGCATAGGATTATTGTTAGTAAACACGGGCCCCACCCTTCTGAATGGGTAACGGGGGGGATCAAAGGCACTTTCAGAAACCCTGGGAGAGAAATTTCGCGTGAGCTCCCTTCTTTGGCCTCTTTTATTCATTGCTCGGTGGGGAATGGGGAGGACACTTATTTTTGGGAGGATAGATGGGTGGGGGATAGACCCCTTTGTGTTACCTTTCCTCGGCTCTATCATCTTTCTTCTATGAAAAATCATTCTGTGGCCGAGGTTCTGATTCATTCAGGGAGCTCTCTTTCTTATTGCTTTGGCTTTGCGCGTCCGTTGTCTGATAGTGAAACAACGGACCTCGTGACTCTCATTTCTTTGATTGGGGAAATCGCTTTTAGTACCACTAGGAAAGACATTCGAGTCTGGAGTCCCGACCCTTCCCTCGGGTTTTCTTGTCGATCCTTCTTCCGATGCCTTTTGGACCCTGTTTCCTCTGAGCCGTCCATTTTCTCTTTATTGTGGAAGGTGAAAGTTCCAAAGAAGGTGCAGTTTTTTATTTGGCAGGTGATCCATGGAAGAGTTAATACTCTTGATCGGCTGTCCAGAAAGATTCCTAGTTTGTTTGGGCCTTTTGTTGCATTCTTTGCCGGATGGTGGAGGAAGACCTCGATCATATGTTATGGAACTGCGCTTTTGCTAGGACAGTGTGAGATGAGTTCTTTGGCTCGTTCGGGTTGCAGTTTGCCAGGCATAGAGGCCTCAGAGAGACGATCGAGGAGTTCCTTCCCCATCCTCCCTTTAGGGAGCAAGGAAAGTTTTTGTGGCAAGCGGGGATTTGTGCTATTATTTGGGGGTTGTGGGATTTCAGTTTTCAGGCACGAGATCGTGCATTTCATCAGTCGACTGTTAGAGTCCAGTTTTCAGGCACGAGATCGTGCGCTCTATCAGTCTCAGGACGGTGTCGAGCACAGACACGAGATCGTGCGCCAGATGGCACTCAGGCATGTTTTCATGCACCTGATTGCTCCACTGTATTTTCATGATTCAGAGCTTTCATCGATATATCTGATGAGCTTGGTCTTCATCCTTATGGATCGTGTTGGTACTTGGATAAAGGCTGTCTCCACTGCTGGTGTTTGTTTGCAGGCATATACTAAGAAACACCCTTCTGAAGAAGGGTTATTGTCCAGTTTTTACACCGTGCTAGTTGGTTCGTCGATAAGACTATTATTAGCTCAGGAAGAAAGTCCTTGTTGA

Protein sequence

VTESKYSCTPVTFEGGGLEIGNLRIRNKALLAKWLWRFYSDSNTLWHRIIVSKHGPHPSEWVTGGIKGTFRNPGREISRELPSLASFIHCSVGNGEDTYFWEDRWVGDRPLCVTFPRLYHLSSMKNHSVAEVLIHSGSSLSYCFGFARPLSDSETTDLVTLISLIGEIAFSTTRKDIRVWSPDPSLGFSCRSFFRCLLDPVSSEPSIFSLLWKVKVPKKVQFFIWQVIHGRVNTLDRLSRKIPSLFGPFVAFFAGWWRKTSIICYGTALLLGQCEMSSLARSGCSLPGIEASERRSRSSFPILPLGSKESFCGKRGFVLLFGGCGISVFRHEIVHFISRLLESSFQARDRALYQSQDGVEHRHEIVRQMALRHVFMHLIAPLYFHDSELSSIYLMSLVFILMDRVGTWIKAVSTAGVCLQAYTKKHPSEEGLLSSFYTVLVGSSIRLLLAQEESPC

Homology

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BLAST of Lcy05g017660 vs. ExPASy Swiss-Prot
Match: P0C2F6 (Putative ribonuclease H protein At1g65750 OS=Arabidopsis thaliana OX=3702 GN=At1g65750 PE=3 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 1.6e-13
Identity = 64/242 (26.45%), Postives = 109/242 (45.04%), Query Frame = 0


Query: 8   CTPVTFEGGGLEIGNLRIRNKALLAKWLWRFYSDSNTLWHRIIVSKHGP---HPSEWVTG 67
           C+P   + GGL +   +  N+AL++K  WR   + N+LW  ++  K+       S W+  
Sbjct: 93  CSPK--KEGGLGVRAAKSMNRALISKVGWRLLQEKNSLWTLVLQKKYHVGEIRDSRWLIP 152

Query: 68  GIKGTFRNPGREISRELPSLASF-IHCSVGNGEDTYFWEDRWVGDRPLCVTFPRLYHLSS 127
             KG++ +  R I+  L  + S  +    G+G+   FW DRWV  +P       L  L +
Sbjct: 153 --KGSWSSTWRSIAIGLRDVVSHGVGWIPGDGQQIRFWTDRWVSGKP-------LLELDN 212

Query: 128 MKNHSVAEVLIHSGSSL-SYCFGFARPLSDSETTDLVTLISLIGEIAFSTTRKDIRVWSP 187
            +  +  + ++     +    + FA+   D  TT+   L      +   T  +D   W  
Sbjct: 213 GERPTDCDTVVAKDLWIPGRGWDFAK--IDPYTTNNTRLELRAVVLDLVTGARDRLSWKF 272

Query: 188 DPSLGFSCRSFFRCLL---DPVSSEPSIFSLLWKVKVPKKVQFFIWQVIHGRVNTLDRLS 242
                FS RS +  L     P  +  S F+ LWKV+VP++V+ F+W V +  V T +   
Sbjct: 273 SQDGQFSVRSAYEMLTVDEVPRPNMASFFNCLWKVRVPERVKTFLWLVGNQAVMTEEERH 321

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BLAST of Lcy05g017660 vs. ExPASy TrEMBL
Match: A0A6J1DFI2 (uncharacterized protein LOC111019624 OS=Momordica charantia OX=3673 GN=LOC111019624 PE=4 SV=1)

HSP 1 Score: 221.1 bits (562), Expect = 9.6e-54
Identity = 105/232 (45.26%), Postives = 149/232 (64.22%), Query Frame = 0


Query: 14  EGGGLEIGNLRIRNKALLAKWLWRFYSDSNTLWHRIIVSKHGPHPSEWV-TGGIKGTFRN 73
           E GGL +GNLR+RN+A LAKWLWRF+ + + LW +IIVSK+  HPS+W+  GG K +  N
Sbjct: 223 EAGGLGVGNLRLRNEAFLAKWLWRFFHEPHALWRKIIVSKYERHPSDWILAGGSKVSNFN 282

Query: 74  PGREISRELPSLASFIHCSVGNGEDTYFWEDRWVGDRPLCVTFPRLYHLSSMKNHSVAEV 133
           P + I+   P  +  +  SVG+G + YFWED W+G++PL + FPR+Y LS  K  SVAEV
Sbjct: 283 PWKAIASCFPVFSLSLRVSVGDGLNAYFWEDTWLGNKPLSLAFPRIYFLSEKKLLSVAEV 342

Query: 134 LIHSGSSLSYCFGFARPLSDSETTDLVTLISLIGEIAFSTTRKDIRVWSPDPSLGFSCRS 193
           L       S   G +R L+D E+ ++  L+ L+  ++ S+ R+D+RVW P+P  GFSC S
Sbjct: 343 LNFGEEDSSISLGLSRSLTDPESLEIAALLDLLPSVSCSSGREDVRVWIPNPLGGFSCSS 402

Query: 194 FFRCLLDP----------VSSEPSI----FSLLWKVKVPKKVQFFIWQVIHG 231
           FF+ L+ P           SS PS+    F+ LWK+K+PKK++FF WQ + G
Sbjct: 403 FFQVLISPSSSSFLASLSSSSSPSLVTPWFTSLWKIKIPKKIKFFGWQRLQG 454

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BLAST of Lcy05g017660 vs. ExPASy TrEMBL
Match: A0A5E4FU33 (zf-RVT domain-containing protein (Fragment) OS=Prunus dulcis OX=3755 GN=ALMOND_2B035216 PE=4 SV=1)

HSP 1 Score: 199.1 bits (505), Expect = 3.9e-47
Identity = 102/233 (43.78%), Postives = 136/233 (58.37%), Query Frame = 0


Query: 14  EGGGLEIGNLRIRNKALLAKWLWRFYSDSNTLWHRIIVSKHGPHPSEWVTGGI-KGTFRN 73
           E GGL IG+LR RN+AL AKWLWRF  ++N+LWHRII SK+G   + W T  I K + RN
Sbjct: 174 EEGGLGIGSLRERNEALRAKWLWRFPLETNSLWHRIIKSKYGIDSNGWDTKQIVKVSCRN 233

Query: 74  PGREISRELPSLASFIHCSVGNGEDTYFWEDRWVGDRPLCVTFPRLYHLSSMKNHSVAEV 133
           P REIS+   S       SVGNGE   FWED W+ +  L   FPRL  LS  KN S+A  
Sbjct: 234 PWREISKGYNSFLQCCRFSVGNGEKIRFWEDLWLKEGILKDLFPRLSSLSRRKNQSIARF 293

Query: 134 LIHSGSSLSYCFGFARPLSDSETTDLVTLISLIGEIAFSTTRKDIRVWSPDPSLGFSCRS 193
             +    L++ F F R LS++E  ++V L+ ++G +    +R D R W  +    FSC+S
Sbjct: 294 ANNHEMPLNWDFDFRRNLSEAEIAEVVILLDILGNVRLYGSRPDRRSWEIEEQGSFSCKS 353

Query: 194 FFRCLLDPVSSEPSIFSLLWKVKVPKKVQFFIWQVIHGRVNTLDRLSRKIPSL 246
           F   LL         FS +WK K P K+QFF+W   +GR+NT D + R+ P +
Sbjct: 354 FRSFLLSTTRDVFPPFSSIWKAKTPPKIQFFVWLAANGRINTCDCIQRRQPKM 406

[Close]

BLAST of Lcy05g017660 vs. ExPASy TrEMBL
Match: M5XV38 (zf-RVT domain-containing protein OS=Prunus persica OX=3760 GN=PRUPE_ppa019854mg PE=4 SV=1)

HSP 1 Score: 197.2 bits (500), Expect = 1.5e-46
Identity = 102/233 (43.78%), Postives = 136/233 (58.37%), Query Frame = 0


Query: 14  EGGGLEIGNLRIRNKALLAKWLWRFYSDSNTLWHRIIVSKHGPHPSEWVTGGI-KGTFRN 73
           E GGL IG+LR RN+AL AKWLWRF  ++N+LWHRII SK+G   + W T  I K + RN
Sbjct: 102 EEGGLGIGSLRERNEALRAKWLWRFPLETNSLWHRIIKSKYGIDSNGWDTKRIDKVSCRN 161

Query: 74  PGREISRELPSLASFIHCSVGNGEDTYFWEDRWVGDRPLCVTFPRLYHLSSMKNHSVAEV 133
           P REIS+   S       SVGNGE   FWED W+ +  L   FPRL  LS  KN S+A  
Sbjct: 162 PWREISKGYNSFLQCCRFSVGNGEKIRFWEDLWLKEGILKDLFPRLSSLSRRKNQSIACF 221

Query: 134 LIHSGSSLSYCFGFARPLSDSETTDLVTLISLIGEIAFSTTRKDIRVWSPDPSLGFSCRS 193
             +    L++ F F R LS++E  ++V L+ ++G +    +R D R W  +    FSC+S
Sbjct: 222 ANNHVLPLNWDFDFRRNLSEAEIAEVVILLDILGNVRLYGSRPDRRSWEVEEQGSFSCKS 281

Query: 194 FFRCLLDPVSSEPSIFSLLWKVKVPKKVQFFIWQVIHGRVNTLDRLSRKIPSL 246
           F   LL         FS +WK K P K+QFF+W   +GR+NT D + R+ P +
Sbjct: 282 FRSFLLSTTRDVFPPFSSIWKAKTPPKIQFFVWLAANGRINTCDCIQRRQPKM 334

[Close]

BLAST of Lcy05g017660 vs. ExPASy TrEMBL
Match: M5X4S0 (Reverse transcriptase domain-containing protein (Fragment) OS=Prunus persica OX=3760 GN=PRUPE_ppa021750mg PE=4 SV=1)

HSP 1 Score: 197.2 bits (500), Expect = 1.5e-46
Identity = 102/233 (43.78%), Postives = 136/233 (58.37%), Query Frame = 0


Query: 14  EGGGLEIGNLRIRNKALLAKWLWRFYSDSNTLWHRIIVSKHGPHPSEWVTGGI-KGTFRN 73
           E GGL IG+LR RN+AL AKWLWRF  ++N+LWHRII SK+G   + W T  I K + RN
Sbjct: 588 EEGGLGIGSLRERNEALRAKWLWRFPLETNSLWHRIIKSKYGIDSNGWDTKRIDKVSCRN 647

Query: 74  PGREISRELPSLASFIHCSVGNGEDTYFWEDRWVGDRPLCVTFPRLYHLSSMKNHSVAEV 133
           P REIS+   S       SVGNGE   FWED W+ +  L   FPRL  LS  KN S+A  
Sbjct: 648 PWREISKGYNSFLQCCRFSVGNGEKIRFWEDLWLKEGILKDLFPRLSSLSRRKNQSIACF 707

Query: 134 LIHSGSSLSYCFGFARPLSDSETTDLVTLISLIGEIAFSTTRKDIRVWSPDPSLGFSCRS 193
             +    L++ F F R LS++E  ++V L+ ++G +    +R D R W  +    FSC+S
Sbjct: 708 ANNHVLPLNWDFDFRRNLSEAEIAEVVILLDILGNVRLYGSRPDRRSWEVEEQGSFSCKS 767

Query: 194 FFRCLLDPVSSEPSIFSLLWKVKVPKKVQFFIWQVIHGRVNTLDRLSRKIPSL 246
           F   LL         FS +WK K P K+QFF+W   +GR+NT D + R+ P +
Sbjct: 768 FRSFLLSTTRDVFPPFSSIWKAKTPPKIQFFVWLAANGRINTCDCIQRRQPKM 820

[Close]

BLAST of Lcy05g017660 vs. ExPASy TrEMBL
Match: M5WPQ5 (Reverse transcriptase domain-containing protein OS=Prunus persica OX=3760 GN=PRUPE_ppa016677mg PE=4 SV=1)

HSP 1 Score: 197.2 bits (500), Expect = 1.5e-46
Identity = 102/233 (43.78%), Postives = 136/233 (58.37%), Query Frame = 0


Query: 14   EGGGLEIGNLRIRNKALLAKWLWRFYSDSNTLWHRIIVSKHGPHPSEWVTGGI-KGTFRN 73
            E GGL IG+LR RN+AL AKWLWRF  ++N+LWHRII SK+G   + W T  I K + RN
Sbjct: 1095 EEGGLGIGSLRERNEALRAKWLWRFPLETNSLWHRIIKSKYGIDSNGWDTKRIDKVSCRN 1154

Query: 74   PGREISRELPSLASFIHCSVGNGEDTYFWEDRWVGDRPLCVTFPRLYHLSSMKNHSVAEV 133
            P REIS+   S       SVGNGE   FWED W+ +  L   FPRL  LS  KN S+A  
Sbjct: 1155 PWREISKGYNSFLQCCRFSVGNGEKIRFWEDLWLKEGILKDLFPRLSSLSRRKNQSIACF 1214

Query: 134  LIHSGSSLSYCFGFARPLSDSETTDLVTLISLIGEIAFSTTRKDIRVWSPDPSLGFSCRS 193
              +    L++ F F R LS++E  ++V L+ ++G +    +R D R W  +    FSC+S
Sbjct: 1215 ANNHVLPLNWDFDFRRNLSEAELAEVVILLDILGNVRLYGSRPDRRSWEVEEQGSFSCKS 1274

Query: 194  FFRCLLDPVSSEPSIFSLLWKVKVPKKVQFFIWQVIHGRVNTLDRLSRKIPSL 246
            F   LL         FS +WK K P K+QFF+W   +GR+NT D + R+ P +
Sbjct: 1275 FRSFLLSTTRDVFPPFSSIWKAKTPPKIQFFVWLAANGRINTCDCIQRRQPKM 1327

[Close]

BLAST of Lcy05g017660 vs. NCBI nr
Match: XP_022151711.1 (uncharacterized protein LOC111019624 [Momordica charantia])

HSP 1 Score: 221.1 bits (562), Expect = 2.0e-53
Identity = 105/232 (45.26%), Postives = 149/232 (64.22%), Query Frame = 0


Query: 14  EGGGLEIGNLRIRNKALLAKWLWRFYSDSNTLWHRIIVSKHGPHPSEWV-TGGIKGTFRN 73
           E GGL +GNLR+RN+A LAKWLWRF+ + + LW +IIVSK+  HPS+W+  GG K +  N
Sbjct: 223 EAGGLGVGNLRLRNEAFLAKWLWRFFHEPHALWRKIIVSKYERHPSDWILAGGSKVSNFN 282

Query: 74  PGREISRELPSLASFIHCSVGNGEDTYFWEDRWVGDRPLCVTFPRLYHLSSMKNHSVAEV 133
           P + I+   P  +  +  SVG+G + YFWED W+G++PL + FPR+Y LS  K  SVAEV
Sbjct: 283 PWKAIASCFPVFSLSLRVSVGDGLNAYFWEDTWLGNKPLSLAFPRIYFLSEKKLLSVAEV 342

Query: 134 LIHSGSSLSYCFGFARPLSDSETTDLVTLISLIGEIAFSTTRKDIRVWSPDPSLGFSCRS 193
           L       S   G +R L+D E+ ++  L+ L+  ++ S+ R+D+RVW P+P  GFSC S
Sbjct: 343 LNFGEEDSSISLGLSRSLTDPESLEIAALLDLLPSVSCSSGREDVRVWIPNPLGGFSCSS 402

Query: 194 FFRCLLDP----------VSSEPSI----FSLLWKVKVPKKVQFFIWQVIHG 231
           FF+ L+ P           SS PS+    F+ LWK+K+PKK++FF WQ + G
Sbjct: 403 FFQVLISPSSSSFLASLSSSSSPSLVTPWFTSLWKIKIPKKIKFFGWQRLQG 454

[Close]

BLAST of Lcy05g017660 vs. NCBI nr
Match: VVA30963.1 (Hypothetical predicted protein, partial [Prunus dulcis])

HSP 1 Score: 199.1 bits (505), Expect = 8.0e-47
Identity = 102/233 (43.78%), Postives = 136/233 (58.37%), Query Frame = 0


Query: 14  EGGGLEIGNLRIRNKALLAKWLWRFYSDSNTLWHRIIVSKHGPHPSEWVTGGI-KGTFRN 73
           E GGL IG+LR RN+AL AKWLWRF  ++N+LWHRII SK+G   + W T  I K + RN
Sbjct: 174 EEGGLGIGSLRERNEALRAKWLWRFPLETNSLWHRIIKSKYGIDSNGWDTKQIVKVSCRN 233

Query: 74  PGREISRELPSLASFIHCSVGNGEDTYFWEDRWVGDRPLCVTFPRLYHLSSMKNHSVAEV 133
           P REIS+   S       SVGNGE   FWED W+ +  L   FPRL  LS  KN S+A  
Sbjct: 234 PWREISKGYNSFLQCCRFSVGNGEKIRFWEDLWLKEGILKDLFPRLSSLSRRKNQSIARF 293

Query: 134 LIHSGSSLSYCFGFARPLSDSETTDLVTLISLIGEIAFSTTRKDIRVWSPDPSLGFSCRS 193
             +    L++ F F R LS++E  ++V L+ ++G +    +R D R W  +    FSC+S
Sbjct: 294 ANNHEMPLNWDFDFRRNLSEAEIAEVVILLDILGNVRLYGSRPDRRSWEIEEQGSFSCKS 353

Query: 194 FFRCLLDPVSSEPSIFSLLWKVKVPKKVQFFIWQVIHGRVNTLDRLSRKIPSL 246
           F   LL         FS +WK K P K+QFF+W   +GR+NT D + R+ P +
Sbjct: 354 FRSFLLSTTRDVFPPFSSIWKAKTPPKIQFFVWLAANGRINTCDCIQRRQPKM 406

[Close]

BLAST of Lcy05g017660 vs. NCBI nr
Match: BBN69274.1 (TatD related DNase [Prunus dulcis])

HSP 1 Score: 196.1 bits (497), Expect = 6.8e-46
Identity = 100/233 (42.92%), Postives = 136/233 (58.37%), Query Frame = 0


Query: 14  EGGGLEIGNLRIRNKALLAKWLWRFYSDSNTLWHRIIVSKHGPHPSEWVTGGI-KGTFRN 73
           E GGL IG+LR RN+AL AKWLWRF  ++N+LWHRII SK+G   + W T  I K + RN
Sbjct: 608 EEGGLGIGSLRERNEALRAKWLWRFPLETNSLWHRIIKSKYGLDSNGWDTKQIDKVSCRN 667

Query: 74  PGREISRELPSLASFIHCSVGNGEDTYFWEDRWVGDRPLCVTFPRLYHLSSMKNHSVAEV 133
           P REIS+   S       SVGNGE   FWED W+ +  L   FPRLY LS  KN  +A  
Sbjct: 668 PWREISKGYISFLQCCRFSVGNGEKIRFWEDFWLKEGILKDLFPRLYSLSRRKNQCIAWF 727

Query: 134 LIHSGSSLSYCFGFARPLSDSETTDLVTLISLIGEIAFSTTRKDIRVWSPDPSLGFSCRS 193
             +    L++ F F R LS++E  ++V L+ ++G +    +R D R W  +    FSC+S
Sbjct: 728 ANNHEMPLNWDFDFRRNLSEAEIAEVVLLLDILGNVRLFGSRPDRRSWEIEEQGSFSCKS 787

Query: 194 FFRCLLDPVSSEPSIFSLLWKVKVPKKVQFFIWQVIHGRVNTLDRLSRKIPSL 246
           F   L+   S     +  +WK K P K+QFF+W   +GR+NT D + R+ P +
Sbjct: 788 FRSFLISTTSVVFPPYRSIWKAKTPPKIQFFVWLAANGRINTCDCIQRRQPKM 840

[Close]

BLAST of Lcy05g017660 vs. NCBI nr
Match: CAN75156.1 (hypothetical protein VITISV_042643 [Vitis vinifera])

HSP 1 Score: 180.3 bits (456), Expect = 3.9e-41
Identity = 96/234 (41.03%), Postives = 131/234 (55.98%), Query Frame = 0


Query: 14  EGGGLEIGNLRIRNKALLAKWLWRFYSDSNTLWHRIIVSKHGPHPSEW-VTGGIKGTFRN 73
           E GGL  G   +RN ALL KWLWRF  + + LWH++I S +G HP+ W     ++ + R 
Sbjct: 355 EMGGLGFGKTSMRNSALLGKWLWRFPRERSGLWHKVIASIYGTHPNGWDANMVVRWSHRC 414

Query: 74  PGREISRELPSLASFIHCSVGNGEDTYFWEDRWVGDRPLCVTFPRLYHLSSMKNHSVAEV 133
           P + I++     + F+   VGNGE   FWED W G++ LC  F  LY +SS++N +V+ V
Sbjct: 415 PWKAIAQVFQEFSPFVRLVVGNGERIXFWEDLWWGNQTLCAQFAELYRVSSVRNLTVSNV 474

Query: 134 LIHSGSSLSYCFGFARPLSDSETTDLVTLISLIGEIAFSTTRKDIRVWSPDPSLGFSCRS 193
           L +S   LS+ F F R L+DSE   L  L+S +  +  S +  D R WS   S  FS +S
Sbjct: 475 LGNS-FPLSWNFNFRRNLTDSEIDLLQRLMSSLHSVLLSPSSSDSRAWSLSSSGSFSVKS 534

Query: 194 FFRCLLDPVSSEPSIF---SLLWKVKVPKKVQFFIWQVIHGRVNTLDRLSRKIP 244
           FF  L     S P +F     LW  KVP KV+   W V HG+VNT D+L  + P
Sbjct: 535 FFYAL--SKDSNPLMFLPAKFLWSSKVPSKVKALAWLVAHGKVNTNDKLQLRRP 585

[Close]

BLAST of Lcy05g017660 vs. NCBI nr
Match: CAN73503.1 (hypothetical protein VITISV_008255 [Vitis vinifera])

HSP 1 Score: 179.9 bits (455), Expect = 5.0e-41
Identity = 96/234 (41.03%), Postives = 131/234 (55.98%), Query Frame = 0


Query: 14  EGGGLEIGNLRIRNKALLAKWLWRFYSDSNTLWHRIIVSKHGPHPSEW-VTGGIKGTFRN 73
           E GGL  G   +RN ALL KWLWRF  + + LWH++I S +G HP+ W     ++ + R 
Sbjct: 337 EMGGLGFGKTSMRNSALLGKWLWRFPRERSGLWHKVIASIYGTHPNGWDANMVVRWSHRC 396

Query: 74  PGREISRELPSLASFIHCSVGNGEDTYFWEDRWVGDRPLCVTFPRLYHLSSMKNHSVAEV 133
           P + I++     + F+   VGNGE   FWED W G++ LC  F  LY +SS++N +V+ V
Sbjct: 397 PWKAIAQVFQEFSPFVRLVVGNGERIRFWEDLWWGNQTLCAQFAELYRVSSVRNLTVSNV 456

Query: 134 LIHSGSSLSYCFGFARPLSDSETTDLVTLISLIGEIAFSTTRKDIRVWSPDPSLGFSCRS 193
           L +S   LS+ F F R L+DSE   L  L+S +  +  S +  D R WS   S  FS +S
Sbjct: 457 LGNS-FPLSWNFNFRRNLTDSEIDLLQRLMSSLHSVLLSPSSSDSRAWSLSSSGSFSVKS 516

Query: 194 FFRCLLDPVSSEPSIF---SLLWKVKVPKKVQFFIWQVIHGRVNTLDRLSRKIP 244
           FF  L     S P +F     LW  KVP KV+   W V HG+VNT D+L  + P
Sbjct: 517 FFYAL--SKDSNPLMFLPAKFLWSSKVPSKVKALAWLVAHGKVNTNDKLQLRRP 567

[Close]

BLAST of Lcy05g017660 vs. TAIR 10
Match: ATMG00310.1 (RNA-directed DNA polymerase (reverse transcriptase)-related family protein )

HSP 1 Score: 47.4 bits (111), Expect = 3.6e-05
Identity = 31/96 (32.29%), Postives = 50/96 (52.08%), Query Frame = 0


Query: 14  EGGGLEIGNLRIRNKALLAKWLWRFYSDSNTLWHRIIVSKHGPHPSEW-VTGGIKGTFRN 73
           + GGL   +L   N+ALLAK  +R     +TL  R++ S++ PH S    + G + ++  
Sbjct: 53  DDGGLGFRDLGWFNQALLAKQSFRIIHQPHTLLSRLLRSRYFPHSSMMECSVGTRPSYAW 112

Query: 74  PGREISRELPSLASFIHCSVGNGEDTYFWEDRWVGD 109
                 REL  L+  +  ++G+G  T  W DRW+ D
Sbjct: 113 RSIIHGREL--LSRGLLRTIGDGIHTKVWLDRWIMD 146

The following BLAST results are available for this feature:

BLAST of Lcy05g017660 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P0C2F6	1.6e-13	26.45	Putative ribonuclease H protein At1g65750 OS=Arabidopsis thaliana OX=3702 GN=At1...	[more]

BLAST of Lcy05g017660 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DFI2	9.6e-54	45.26	uncharacterized protein LOC111019624 OS=Momordica charantia OX=3673 GN=LOC111019...	[more]
A0A5E4FU33	3.9e-47	43.78	zf-RVT domain-containing protein (Fragment) OS=Prunus dulcis OX=3755 GN=ALMOND_2...	[more]
M5XV38	1.5e-46	43.78	zf-RVT domain-containing protein OS=Prunus persica OX=3760 GN=PRUPE_ppa019854mg ...	[more]
M5X4S0	1.5e-46	43.78	Reverse transcriptase domain-containing protein (Fragment) OS=Prunus persica OX=...	[more]
M5WPQ5	1.5e-46	43.78	Reverse transcriptase domain-containing protein OS=Prunus persica OX=3760 GN=PRU...	[more]

BLAST of Lcy05g017660 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022151711.1	2.0e-53	45.26	uncharacterized protein LOC111019624 [Momordica charantia]	[more]
VVA30963.1	8.0e-47	43.78	Hypothetical predicted protein, partial [Prunus dulcis]	[more]
BBN69274.1	6.8e-46	42.92	TatD related DNase [Prunus dulcis]	[more]
CAN75156.1	3.9e-41	41.03	hypothetical protein VITISV_042643 [Vitis vinifera]	[more]
CAN73503.1	5.0e-41	41.03	hypothetical protein VITISV_008255 [Vitis vinifera]	[more]

BLAST of Lcy05g017660 vs. TAIR 10


Match Name	E-value	Identity	Description
ATMG00310.1	3.6e-05	32.29	RNA-directed DNA polymerase (reverse transcriptase)-related family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR026960	Reverse transcriptase zinc-binding domain	PFAM	PF13966	zf-RVT	coord: 188..241 e-value: 1.3E-7 score: 32.2
None	No IPR available	PANTHER	PTHR36617	PROTEIN, PUTATIVE-RELATED	coord: 85..228

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy05g017660.1	Lcy05g017660.1	mRNA