Lcy05g017540 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy05g017540
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	BED-type domain-containing protein
Location	Chr05: 30566388 .. 30566729 (-)
RNA-Seq Expression	Lcy05g017540
Synteny	Lcy05g017540

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTTCATATGCTTTTAGATAGGCTTTCAGGAAATTTAATGTTGGATGGGAGTTTATTTCATATGCGGTGTTGTGTTCATATTTTGAATTTGATTGTGAAAGATGGATTAGCAGTAATGGGGGATGGTATTGAAAGAGTTCGTAATAGTGTTGCTTTTTGGATAGATACACCAAAGAAATTAGAAAAGTTTGAAGAAACTGCTCGTCAATTGAATGTTCACATTGGGAGGAAGTTAACACTTGATTGTTGTACTAGATGGAATTCTGCGTATTTCATGTTAGCTATGGCTTTGGATTATAATATTGTTTTTCCTCGATTAAAACAACGTGAGCCAAAATAA

mRNA sequence

ATGGTTCATATGCTTTTAGATAGGCTTTCAGGAAATTTAATGTTGGATGGGAGTTTATTTCATATGCGGTGTTGTGTTCATATTTTGAATTTGATTGTGAAAGATGGATTAGCAGTAATGGGGGATGGTATTGAAAGAGTTCGTAATAGTGTTGCTTTTTGGATAGATACACCAAAGAAATTAGAAAAGTTTGAAGAAACTGCTCGTCAATTGAATGTTCACATTGGGAGGAAGTTAACACTTGATTGTTGTACTAGATGGAATTCTGCGTATTTCATGTTAGCTATGGCTTTGGATTATAATATTGTTTTTCCTCGATTAAAACAACGTGAGCCAAAATAA

Coding sequence (CDS)

ATGGTTCATATGCTTTTAGATAGGCTTTCAGGAAATTTAATGTTGGATGGGAGTTTATTTCATATGCGGTGTTGTGTTCATATTTTGAATTTGATTGTGAAAGATGGATTAGCAGTAATGGGGGATGGTATTGAAAGAGTTCGTAATAGTGTTGCTTTTTGGATAGATACACCAAAGAAATTAGAAAAGTTTGAAGAAACTGCTCGTCAATTGAATGTTCACATTGGGAGGAAGTTAACACTTGATTGTTGTACTAGATGGAATTCTGCGTATTTCATGTTAGCTATGGCTTTGGATTATAATATTGTTTTTCCTCGATTAAAACAACGTGAGCCAAAATAA

Protein sequence

MVHMLLDRLSGNLMLDGSLFHMRCCVHILNLIVKDGLAVMGDGIERVRNSVAFWIDTPKKLEKFEETARQLNVHIGRKLTLDCCTRWNSAYFMLAMALDYNIVFPRLKQREPK

Homology

[Close]

BLAST of Lcy05g017540 vs. ExPASy Swiss-Prot
Match: P08770 (Putative AC transposase OS=Zea mays OX=4577 PE=2 SV=2)

HSP 1 Score: 85.5 bits (210), Expect = 4.2e-16
Identity = 44/115 (38.26%), Postives = 67/115 (58.26%), Query Frame = 0


Query: 2   VHMLLDRL---SGNLMLDGSLFHMRCCVHILNLIVKDGLAVMGDGIERVRNSVAFWIDTP 61
           VH +++ L     NL+ DG+ FH+RC  HILNL+ KDGLAV+   IE+++  V     +P
Sbjct: 376 VHDIIEDLQDTDSNLVCDGAFFHVRCACHILNLVAKDGLAVIAGTIEKIKAIVLAVKSSP 435

Query: 62  KKLEKFEETARQLNVHIGRKLTLDCCTRWNSAYFMLAMALDYNIVFPRLKQREPK 114
            + E+  + A + ++   + ++ D  TRWNS Y ML  AL Y     RLK  +P+
Sbjct: 436 LQWEELMKCASECDLDKSKGISYDVSTRWNSTYLMLRDALYYKPALIRLKTSDPR 490

[Close]

BLAST of Lcy05g017540 vs. ExPASy Swiss-Prot
Match: P03010 (Putative AC9 transposase OS=Zea mays OX=4577 PE=4 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 4.2e-16
Identity = 44/115 (38.26%), Postives = 67/115 (58.26%), Query Frame = 0


Query: 2   VHMLLDRL---SGNLMLDGSLFHMRCCVHILNLIVKDGLAVMGDGIERVRNSVAFWIDTP 61
           VH +++ L     NL+ DG+ FH+RC  HILNL+ KDGLAV+   IE+++  V     +P
Sbjct: 321 VHDIIEDLQDTDSNLVCDGAFFHVRCACHILNLVAKDGLAVIAGTIEKIKAIVLAVKSSP 380

Query: 62  KKLEKFEETARQLNVHIGRKLTLDCCTRWNSAYFMLAMALDYNIVFPRLKQREPK 114
            + E+  + A + ++   + ++ D  TRWNS Y ML  AL Y     RLK  +P+
Sbjct: 381 LQWEELMKCASECDLDKSKGISYDVSTRWNSTYLMLRDALYYKPALIRLKTSDPR 435

[Close]

BLAST of Lcy05g017540 vs. ExPASy Swiss-Prot
Match: Q6AVI0 (Zinc finger BED domain-containing protein RICESLEEPER 2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0733400 PE=2 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 4.7e-15
Identity = 46/106 (43.40%), Postives = 60/106 (56.60%), Query Frame = 0


Query: 5   LLDRLS--GNLMLDGSLFHMRCCVHILNLIVKDGLAVMGDGIERVRNSVAFWIDTPKKLE 64
           L D LS   NLML G LF +RC  HILN + +D +A +   I  +R S+ F   +P + E
Sbjct: 320 LRDYLSNKNNLMLKGQLFVVRCYAHILNAVAQDVIASIHGVIYNIRESIKFIKASPSREE 379

Query: 65  KFEETARQLNVHIGRKLTLDCCTRWNSAYFMLAMALDYNIVFPRLK 109
           KF E A QL +   + L LD  T+WN+ Y ML  ALDY   F  L+
Sbjct: 380 KFAEIALQLEIPSTKTLCLDVTTQWNTTYLMLLAALDYKQAFSTLE 425

[Close]

BLAST of Lcy05g017540 vs. ExPASy Swiss-Prot
Match: B9FJG3 (Zinc finger BED domain-containing protein RICESLEEPER 1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0239150 PE=3 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 1.8e-14
Identity = 46/106 (43.40%), Postives = 59/106 (55.66%), Query Frame = 0


Query: 5   LLDRLS--GNLMLDGSLFHMRCCVHILNLIVKDGLAVMGDGIERVRNSVAFWIDTPKKLE 64
           L D LS   NLML G LF +RC  HILN + +D +A +   I  +R S+ F   +P   E
Sbjct: 320 LRDYLSNKNNLMLKGQLFVVRCYAHILNAVAQDVIASIHGVIYNIRESIKFIKASPSCEE 379

Query: 65  KFEETARQLNVHIGRKLTLDCCTRWNSAYFMLAMALDYNIVFPRLK 109
           KF E A QL +   + L LD  T+WN+ Y ML  ALDY   F  L+
Sbjct: 380 KFAEIALQLEIPSTKTLCLDVTTQWNTTYLMLLAALDYKQAFSTLE 425

[Close]

BLAST of Lcy05g017540 vs. ExPASy Swiss-Prot
Match: Q75HY5 (Zinc finger BED domain-containing protein RICESLEEPER 3 OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0583200 PE=2 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 1.1e-13
Identity = 40/103 (38.83%), Postives = 56/103 (54.37%), Query Frame = 0


Query: 6   LDRLSGNLMLDGSLFHMRCCVHILNLIVKDGLAVMGDGIERVRNSVAFWIDTPKKLEKFE 65
           L     N+M+ G LF +RC  HILN + +D +A +   I  +R S+ F   +    +KF 
Sbjct: 364 LSNKKDNIMIKGQLFVVRCYAHILNTVAQDVIASVHSVIYHIRESIKFIKASSVHEDKFA 423

Query: 66  ETARQLNVHIGRKLTLDCCTRWNSAYFMLAMALDYNIVFPRLK 109
           E A QL +   + L LD  T+WN+ Y ML  ALDY  VF  L+
Sbjct: 424 EIALQLEIPSAKTLCLDVTTQWNTTYLMLLAALDYQQVFASLE 466

[Close]

BLAST of Lcy05g017540 vs. ExPASy TrEMBL
Match: A0A6A2X9E9 (Uncharacterized protein OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00116970pilonHSYRG00133 PE=4 SV=1)

HSP 1 Score: 153.7 bits (387), Expect = 4.6e-34
Identity = 73/112 (65.18%), Postives = 90/112 (80.36%), Query Frame = 0


Query: 1    MVHMLLDRLSGN-LMLDGSLFHMRCCVHILNLIVKDGLAVMGDGIERVRNSVAFWIDTPK 60
            M+H+LLD+LS N L+L G LFHMRCC HILNLIV+DGL+V+GDGIER+R+SV FW  T K
Sbjct: 931  MIHLLLDKLSLNSLILGGELFHMRCCAHILNLIVQDGLSVIGDGIERIRDSVYFWSATQK 990

Query: 61   KLEKFEETARQLNVHIGRKLTLDCCTRWNSAYFMLAMALDYNIVFPRLKQRE 112
            ++EKFEE AR L +   +KL+LDC TRWNS Y ML++A+ Y  VF RLKQRE
Sbjct: 991  RIEKFEEAARHLTIDCSKKLSLDCKTRWNSTYLMLSVAIVYKDVFKRLKQRE 1042

[Close]

BLAST of Lcy05g017540 vs. ExPASy TrEMBL
Match: A0A6A3B3F8 (BED-type domain-containing protein OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00110328pilonHSYRG00714 PE=4 SV=1)

HSP 1 Score: 153.7 bits (387), Expect = 4.6e-34
Identity = 73/112 (65.18%), Postives = 90/112 (80.36%), Query Frame = 0


Query: 1   MVHMLLDRLSGN-LMLDGSLFHMRCCVHILNLIVKDGLAVMGDGIERVRNSVAFWIDTPK 60
           M+H+LLD+LS N L+L G LFHMRCC HILNLIV+DGL+V+GDGIER+R+SV FW  T K
Sbjct: 352 MIHLLLDKLSLNSLILGGELFHMRCCAHILNLIVQDGLSVIGDGIERIRDSVYFWSATQK 411

Query: 61  KLEKFEETARQLNVHIGRKLTLDCCTRWNSAYFMLAMALDYNIVFPRLKQRE 112
           ++EKFEE AR L +   +KL+LDC TRWNS Y ML++A+ Y  VF RLKQRE
Sbjct: 412 RIEKFEEAARHLTIDCSKKLSLDCKTRWNSTYLMLSVAIVYKDVFKRLKQRE 463

[Close]

BLAST of Lcy05g017540 vs. ExPASy TrEMBL
Match: A0A6A2WP44 (BED-type domain-containing protein OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00113337pilonHSYRG00037 PE=4 SV=1)

HSP 1 Score: 152.9 bits (385), Expect = 7.9e-34
Identity = 73/112 (65.18%), Postives = 90/112 (80.36%), Query Frame = 0


Query: 1   MVHMLLDRLSGN-LMLDGSLFHMRCCVHILNLIVKDGLAVMGDGIERVRNSVAFWIDTPK 60
           M+H+LLD+LS N L+L G LFHMRCC HILNLIV+DGL+V+GDGIER+R+SV FW  T K
Sbjct: 294 MIHLLLDKLSLNSLILGGELFHMRCCAHILNLIVQDGLSVIGDGIERIRDSVYFWSATQK 353

Query: 61  KLEKFEETARQLNVHIGRKLTLDCCTRWNSAYFMLAMALDYNIVFPRLKQRE 112
           ++EKFEE AR L +   +KL+LDC TRWNS Y ML++A+ Y  VF RLKQRE
Sbjct: 354 RIEKFEEAARHLAIDCSKKLSLDCKTRWNSTYLMLSVAIVYKDVFKRLKQRE 405

[Close]

BLAST of Lcy05g017540 vs. ExPASy TrEMBL
Match: A0A5C7IVC5 (Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_001607 PE=4 SV=1)

HSP 1 Score: 150.6 bits (379), Expect = 3.9e-33
Identity = 70/112 (62.50%), Postives = 91/112 (81.25%), Query Frame = 0


Query: 1   MVHMLLDRL-SGNLMLDGSLFHMRCCVHILNLIVKDGLAVMGDGIERVRNSVAFWIDTPK 60
           M+  LL++L + +L+L+G+LFHMRCC HILNLIVKDGL V+G+GIER+R+SV +W+ TPK
Sbjct: 182 MIPSLLEKLNNSDLILNGTLFHMRCCAHILNLIVKDGLDVIGEGIERIRSSVLYWVATPK 241

Query: 61  KLEKFEETARQLNVHIGRKLTLDCCTRWNSAYFMLAMALDYNIVFPRLKQRE 112
           ++EKFE+TARQLN+   ++L LDC TRWNS YFML +AL Y  VF RL  RE
Sbjct: 242 RIEKFEDTARQLNIPYSKRLVLDCPTRWNSTYFMLTIALLYKDVFARLSVRE 293

[Close]

BLAST of Lcy05g017540 vs. ExPASy TrEMBL
Match: A0A5C7IUL5 (BED-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_001606 PE=4 SV=1)

HSP 1 Score: 150.6 bits (379), Expect = 3.9e-33
Identity = 70/112 (62.50%), Postives = 91/112 (81.25%), Query Frame = 0


Query: 1   MVHMLLDRL-SGNLMLDGSLFHMRCCVHILNLIVKDGLAVMGDGIERVRNSVAFWIDTPK 60
           M+  LL++L + +L+L+G+LFHMRCC HILNLIVKDGL V+G+GIER+R+SV +W+ TPK
Sbjct: 260 MITSLLEKLNNSDLILNGTLFHMRCCAHILNLIVKDGLDVIGEGIERIRSSVLYWVATPK 319

Query: 61  KLEKFEETARQLNVHIGRKLTLDCCTRWNSAYFMLAMALDYNIVFPRLKQRE 112
           ++EKFE+TARQLN+   ++L LDC TRWNS YFML +AL Y  VF RL  RE
Sbjct: 320 RIEKFEDTARQLNIPYSKRLVLDCPTRWNSTYFMLTIALLYKDVFARLSVRE 371

[Close]

BLAST of Lcy05g017540 vs. NCBI nr
Match: XP_038882263.1 (zinc finger BED domain-containing protein RICESLEEPER 1-like [Benincasa hispida])

HSP 1 Score: 176.4 bits (446), Expect = 1.4e-40
Identity = 84/113 (74.34%), Postives = 96/113 (84.96%), Query Frame = 0


Query: 1   MVHMLLDRLSGNLMLDGSLFHMRCCVHILNLIVKDGLAVMGDGIERVRNSVAFWIDTPKK 60
           MV+ML+D L GNL+LDGSLFHMRCC HI+NLIVKD LA++ DGIERVR+SV+FW+ T KK
Sbjct: 91  MVNMLVDSLCGNLILDGSLFHMRCCAHIINLIVKDRLAMIVDGIERVRSSVSFWVHTQKK 150

Query: 61  LEKFEETARQLNVHIGRKLTLDCCTRWNSAYFMLAMALDYNIVFPRLKQREPK 114
            EKFEETARQLNV+ G+ L+LDCCTRWNS YFMLA AL Y  VF RLKQRE K
Sbjct: 151 NEKFEETARQLNVYDGQMLSLDCCTRWNSTYFMLATALKYKAVFDRLKQRESK 203

[Close]

BLAST of Lcy05g017540 vs. NCBI nr
Match: KAE8658736.1 (hypothetical protein F3Y22_tig00116970pilonHSYRG00133 [Hibiscus syriacus])

HSP 1 Score: 153.7 bits (387), Expect = 9.6e-34
Identity = 73/112 (65.18%), Postives = 90/112 (80.36%), Query Frame = 0


Query: 1    MVHMLLDRLSGN-LMLDGSLFHMRCCVHILNLIVKDGLAVMGDGIERVRNSVAFWIDTPK 60
            M+H+LLD+LS N L+L G LFHMRCC HILNLIV+DGL+V+GDGIER+R+SV FW  T K
Sbjct: 931  MIHLLLDKLSLNSLILGGELFHMRCCAHILNLIVQDGLSVIGDGIERIRDSVYFWSATQK 990

Query: 61   KLEKFEETARQLNVHIGRKLTLDCCTRWNSAYFMLAMALDYNIVFPRLKQRE 112
            ++EKFEE AR L +   +KL+LDC TRWNS Y ML++A+ Y  VF RLKQRE
Sbjct: 991  RIEKFEEAARHLTIDCSKKLSLDCKTRWNSTYLMLSVAIVYKDVFKRLKQRE 1042

[Close]

BLAST of Lcy05g017540 vs. NCBI nr
Match: KAE8709865.1 (hypothetical protein F3Y22_tig00110328pilonHSYRG00714 [Hibiscus syriacus])

HSP 1 Score: 153.7 bits (387), Expect = 9.6e-34
Identity = 73/112 (65.18%), Postives = 90/112 (80.36%), Query Frame = 0


Query: 1   MVHMLLDRLSGN-LMLDGSLFHMRCCVHILNLIVKDGLAVMGDGIERVRNSVAFWIDTPK 60
           M+H+LLD+LS N L+L G LFHMRCC HILNLIV+DGL+V+GDGIER+R+SV FW  T K
Sbjct: 352 MIHLLLDKLSLNSLILGGELFHMRCCAHILNLIVQDGLSVIGDGIERIRDSVYFWSATQK 411

Query: 61  KLEKFEETARQLNVHIGRKLTLDCCTRWNSAYFMLAMALDYNIVFPRLKQRE 112
           ++EKFEE AR L +   +KL+LDC TRWNS Y ML++A+ Y  VF RLKQRE
Sbjct: 412 RIEKFEEAARHLTIDCSKKLSLDCKTRWNSTYLMLSVAIVYKDVFKRLKQRE 463

[Close]

BLAST of Lcy05g017540 vs. NCBI nr
Match: KAE8662422.1 (hypothetical protein F3Y22_tig00113337pilonHSYRG00037 [Hibiscus syriacus])

HSP 1 Score: 152.9 bits (385), Expect = 1.6e-33
Identity = 73/112 (65.18%), Postives = 90/112 (80.36%), Query Frame = 0


Query: 1   MVHMLLDRLSGN-LMLDGSLFHMRCCVHILNLIVKDGLAVMGDGIERVRNSVAFWIDTPK 60
           M+H+LLD+LS N L+L G LFHMRCC HILNLIV+DGL+V+GDGIER+R+SV FW  T K
Sbjct: 294 MIHLLLDKLSLNSLILGGELFHMRCCAHILNLIVQDGLSVIGDGIERIRDSVYFWSATQK 353

Query: 61  KLEKFEETARQLNVHIGRKLTLDCCTRWNSAYFMLAMALDYNIVFPRLKQRE 112
           ++EKFEE AR L +   +KL+LDC TRWNS Y ML++A+ Y  VF RLKQRE
Sbjct: 354 RIEKFEEAARHLAIDCSKKLSLDCKTRWNSTYLMLSVAIVYKDVFKRLKQRE 405

[Close]

BLAST of Lcy05g017540 vs. NCBI nr
Match: TXG73027.1 (hypothetical protein EZV62_001606 [Acer yangbiense])

HSP 1 Score: 150.6 bits (379), Expect = 8.1e-33
Identity = 70/112 (62.50%), Postives = 91/112 (81.25%), Query Frame = 0


Query: 1   MVHMLLDRL-SGNLMLDGSLFHMRCCVHILNLIVKDGLAVMGDGIERVRNSVAFWIDTPK 60
           M+  LL++L + +L+L+G+LFHMRCC HILNLIVKDGL V+G+GIER+R+SV +W+ TPK
Sbjct: 260 MITSLLEKLNNSDLILNGTLFHMRCCAHILNLIVKDGLDVIGEGIERIRSSVLYWVATPK 319

Query: 61  KLEKFEETARQLNVHIGRKLTLDCCTRWNSAYFMLAMALDYNIVFPRLKQRE 112
           ++EKFE+TARQLN+   ++L LDC TRWNS YFML +AL Y  VF RL  RE
Sbjct: 320 RIEKFEDTARQLNIPYSKRLVLDCPTRWNSTYFMLTIALLYKDVFARLSVRE 371

[Close]

BLAST of Lcy05g017540 vs. TAIR 10
Match: AT3G42170.1 (BED zinc finger ;hAT family dimerisation domain )

HSP 1 Score: 54.3 bits (129), Expect = 7.4e-08
Identity = 33/99 (33.33%), Postives = 46/99 (46.46%), Query Frame = 0


Query: 14  MLDGSLFHMRCCVHILNLIVKDGLAVMGDGIERVRNSVAFWIDTPKKLEKFEETARQLNV 73
           +LDG L    C       + KD L    D I+ +R+SV     +    E+F E   QL V
Sbjct: 326 ILDGQLVIGNCVARTFGSLAKDVLEKGKDVIKNIRDSVKHVKTSESHEERFTELKEQLQV 385

Query: 74  HIGRKLTLDCCTRWNSAYFMLAMALDYNIVFPRLKQREP 113
              + L+LD  T+WN+ Y ML  A +   VF  L   +P
Sbjct: 386 PSEKVLSLDDQTQWNTTYMMLVAASELKEVFSCLDTADP 424

The following BLAST results are available for this feature:

BLAST of Lcy05g017540 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P08770	4.2e-16	38.26	Putative AC transposase OS=Zea mays OX=4577 PE=2 SV=2	[more]
P03010	4.2e-16	38.26	Putative AC9 transposase OS=Zea mays OX=4577 PE=4 SV=1	[more]
Q6AVI0	4.7e-15	43.40	Zinc finger BED domain-containing protein RICESLEEPER 2 OS=Oryza sativa subsp. j...	[more]
B9FJG3	1.8e-14	43.40	Zinc finger BED domain-containing protein RICESLEEPER 1 OS=Oryza sativa subsp. j...	[more]
Q75HY5	1.1e-13	38.83	Zinc finger BED domain-containing protein RICESLEEPER 3 OS=Oryza sativa subsp. j...	[more]

BLAST of Lcy05g017540 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6A2X9E9	4.6e-34	65.18	Uncharacterized protein OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00116970pilon...	[more]
A0A6A3B3F8	4.6e-34	65.18	BED-type domain-containing protein OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00...	[more]
A0A6A2WP44	7.9e-34	65.18	BED-type domain-containing protein OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00...	[more]
A0A5C7IVC5	3.9e-33	62.50	Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_001607 PE=4 SV=1	[more]
A0A5C7IUL5	3.9e-33	62.50	BED-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_001606...	[more]

BLAST of Lcy05g017540 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038882263.1	1.4e-40	74.34	zinc finger BED domain-containing protein RICESLEEPER 1-like [Benincasa hispida]	[more]
KAE8658736.1	9.6e-34	65.18	hypothetical protein F3Y22_tig00116970pilonHSYRG00133 [Hibiscus syriacus]	[more]
KAE8709865.1	9.6e-34	65.18	hypothetical protein F3Y22_tig00110328pilonHSYRG00714 [Hibiscus syriacus]	[more]
KAE8662422.1	1.6e-33	65.18	hypothetical protein F3Y22_tig00113337pilonHSYRG00037 [Hibiscus syriacus]	[more]
TXG73027.1	8.1e-33	62.50	hypothetical protein EZV62_001606 [Acer yangbiense]	[more]

BLAST of Lcy05g017540 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G42170.1	7.4e-08	33.33	BED zinc finger ;hAT family dimerisation domain	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR23272:SF141	ZINC FINGER BED DOMAIN-CONTAINING PROTEIN RICESLEEPER 2-LIKE	coord: 22..110
None	No IPR available	PANTHER	PTHR23272	BED FINGER-RELATED	coord: 22..110
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 7..100

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy05g017540.1	Lcy05g017540.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009791	post-embryonic development
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0046983	protein dimerization activity