Lcy05g017380 (gene) Sponge gourd (P93075) v1

Overview
NameLcy05g017380
Typegene
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionReverse transcriptase domain-containing protein
LocationChr05: 29882339 .. 29883531 (+)
RNA-Seq ExpressionLcy05g017380
SyntenyLcy05g017380
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATGGCGAGATTCTGGTGGGGATCCACAGAGACGAAAAGAAGAATTCATTGGAAAAAAGGGAATAAATTATGCCTTCCAAAAGAGCTTGGTGGTTTAAACTTCCGTGACTTGGTGCTTTTTAATAAAGCTTTGCTAGCCAAACAGGTATGGAGACTATTCACAAATCCAAACTTATTGGTTTCCAAGGTCATCAAAGGCATATATGCTCCGCATGATTCACTTCTGATAGCTCCAGTCAAATCTAATTGTTCTGTTTTTTGGAGAGGCTTTGTCTGGGCCCGGGAGTTATTGCGTTCTGGATTAAGGAAAAGGATTGGGAATGGACTAACCACATACTTCTTTACGGATCCCTGGATCCCAAAAGAAATCACATTTAAGCCATCCAGAGCCATTGGTGTAGAACTTCATGAAGAACTACGAGTATCTGAATTCATTACACCATCTTTAGGATGGAATATGGATAAGCTAAAGACTATGGTGAGTGAGGAGGATGTCAATCTAATTGCCACCATTCCTATTAGCTCAAGTAATGACGATGATACATGGATTTGGCATTATTGTTCTAATGGCCATTATGCAGTGAGAAGTGGATACAAACTTGCCATGACTTTATCAAATGATGCAAAATCAGCAAGTAGTGAAGATTTGAGACAGTGGTGGAATACTCTTTGGAAAATCAAAATACCATCAAAAGTGAAGTTATTCATATGGCGGACTTTCCATGAATGCTTACCTACCAATTACTGTTTATGGCAGCGAGGTATTGAGGTATCACCTATATGCAATATATGCCAATCAGCTAAGGAGACCATCGATCATGCTTTATGTGGTTGTAAGCGTGCAAGGCGAATAGGTGATACCATTTTAGCAATGTTTATCATAATATGGAAATTTTAGATTGGATGCAGCGGTGCGAGTGGATCCAAGACTATATAGAGAGCACCAGCACAAAGATGAGACAGACCTCTAGCATAGTTCCCCCTGCATTCGTGCCTCATATGCCAATGTGTTCAGTTCAATTATATACTGATGCAGTGATTGGTTCGGACCAAACAGGGGTTGGATATGGGGCCATTATTCTTCATTCTGATGGCGAGGTGCGGGGCGCAATGGAGTCTTACGAAACAACACCACATACACCTTTAGCAGCAGAAGTGAATGCCATAATATATGGTATTAGATTATTGTAA

mRNA sequence

ATGATGGCGAGATTCTGGTGGGGATCCACAGAGACGAAAAGAAGAATTCATTGGAAAAAAGGGAATAAATTATGCCTTCCAAAAGAGCTTGGTGGTTTAAACTTCCGTGACTTGGTGCTTTTTAATAAAGCTTTGCTAGCCAAACAGGTATGGAGACTATTCACAAATCCAAACTTATTGGTTTCCAAGGTCATCAAAGGCATATATGCTCCGCATGATTCACTTCTGATAGCTCCAGTCAAATCTAATTGTTCTGTTTTTTGGAGAGGCTTTGTCTGGGCCCGGGAGTTATTGCGTTCTGGATTAAGGAAAAGGATTGGGAATGGACTAACCACATACTTCTTTACGGATCCCTGGATCCCAAAAGAAATCACATTTAAGCCATCCAGAGCCATTGGTGTAGAACTTCATGAAGAACTACGAGTATCTGAATTCATTACACCATCTTTAGGATGGAATATGGATAAGCTAAAGACTATGGTGAGTGAGGAGGATGTCAATCTAATTGCCACCATTCCTATTAGCTCAATTCAATTATATACTGATGCAGTGATTGGTTCGGACCAAACAGGGGTTGGATATGGGGCCATTATTCTTCATTCTGATGGCGAGGTGCGGGGCGCAATGGAGTCTTACGAAACAACACCACATACACCTTTAGCAGCAGAAGTGAATGCCATAATATATGGTATTAGATTATTGTAA

Coding sequence (CDS)

ATGATGGCGAGATTCTGGTGGGGATCCACAGAGACGAAAAGAAGAATTCATTGGAAAAAAGGGAATAAATTATGCCTTCCAAAAGAGCTTGGTGGTTTAAACTTCCGTGACTTGGTGCTTTTTAATAAAGCTTTGCTAGCCAAACAGGTATGGAGACTATTCACAAATCCAAACTTATTGGTTTCCAAGGTCATCAAAGGCATATATGCTCCGCATGATTCACTTCTGATAGCTCCAGTCAAATCTAATTGTTCTGTTTTTTGGAGAGGCTTTGTCTGGGCCCGGGAGTTATTGCGTTCTGGATTAAGGAAAAGGATTGGGAATGGACTAACCACATACTTCTTTACGGATCCCTGGATCCCAAAAGAAATCACATTTAAGCCATCCAGAGCCATTGGTGTAGAACTTCATGAAGAACTACGAGTATCTGAATTCATTACACCATCTTTAGGATGGAATATGGATAAGCTAAAGACTATGGTGAGTGAGGAGGATGTCAATCTAATTGCCACCATTCCTATTAGCTCAATTCAATTATATACTGATGCAGTGATTGGTTCGGACCAAACAGGGGTTGGATATGGGGCCATTATTCTTCATTCTGATGGCGAGGTGCGGGGCGCAATGGAGTCTTACGAAACAACACCACATACACCTTTAGCAGCAGAAGTGAATGCCATAATATATGGTATTAGATTATTGTAA

Protein sequence

MMARFWWGSTETKRRIHWKKGNKLCLPKELGGLNFRDLVLFNKALLAKQVWRLFTNPNLLVSKVIKGIYAPHDSLLIAPVKSNCSVFWRGFVWARELLRSGLRKRIGNGLTTYFFTDPWIPKEITFKPSRAIGVELHEELRVSEFITPSLGWNMDKLKTMVSEEDVNLIATIPISSIQLYTDAVIGSDQTGVGYGAIILHSDGEVRGAMESYETTPHTPLAAEVNAIIYGIRLL
Homology
BLAST of Lcy05g017380 vs. ExPASy Swiss-Prot
Match: P93295 (Uncharacterized mitochondrial protein AtMg00310 OS=Arabidopsis thaliana OX=3702 GN=AtMg00310 PE=4 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 7.9e-25
Identity = 57/128 (44.53%), Postives = 75/128 (58.59%), Query Frame = 0

Query: 2   MARFWWGSTETKRRIHWKKGNKLCLPKE-LGGLNFRDLVLFNKALLAKQVWRLFTNPNLL 61
           M  FWW S E KR+I W    KLC  KE  GGL FRDL  FN+ALLAKQ +R+   P+ L
Sbjct: 25  MTEFWWSSCENKRKISWVAWQKLCKSKEDDGGLGFRDLGWFNQALLAKQSFRIIHQPHTL 84

Query: 62  VSKVIKGIYAPHDSLLIAPVKSNCSVFWRGFVWARELLRSGLRKRIGNGLTTYFFTDPWI 121
           +S++++  Y PH S++   V +  S  WR  +  RELL  GL + IG+G+ T  + D WI
Sbjct: 85  LSRLLRSRYFPHSSMMECSVGTRPSYAWRSIIHGRELLSRGLLRTIGDGIHTKVWLDRWI 144

Query: 122 PKEITFKP 129
             E    P
Sbjct: 145 MDETPLPP 152

BLAST of Lcy05g017380 vs. ExPASy TrEMBL
Match: A0A6J1BRN0 (uncharacterized protein LOC111004787 OS=Momordica charantia OX=3673 GN=LOC111004787 PE=4 SV=1)

HSP 1 Score: 183.7 bits (465), Expect = 8.7e-43
Identity = 87/177 (49.15%), Postives = 123/177 (69.49%), Query Frame = 0

Query: 1   MMARFWWGSTETKRRIHWKKGNKLCLPKELGGLNFRDLVLFNKALLAKQVWRLFTNPNLL 60
           M ARFWWGS+   +++HW    ++CLPKELGGLNFRDL  FN+AL+AKQVWR+  NPN+L
Sbjct: 46  MFARFWWGSSNDTKKLHWMSWERMCLPKELGGLNFRDLEGFNQALVAKQVWRVLQNPNIL 105

Query: 61  VSKVIKGIYAPHDSLLI-APVKSNCSVFWRGFVWARELLRSGLRKRIGNGLTTYFFTDPW 120
           VS+V+K  Y  HDSL++ A    N S FW+GF+W R+LL  GLR R+GNG T   F+DPW
Sbjct: 106 VSRVLKAKYF-HDSLVLQATHLRNQSYFWKGFIWGRDLLIKGLRSRVGNGSTINIFSDPW 165

Query: 121 IPKEITFKPSRA-IGVELHEELRVSEFITPSLGWNMDKLKTMVSEEDVNLIATIPIS 176
           IP+  +F+P  A  G     +++V++ I P+  W++  +  +  EED +LI ++P+S
Sbjct: 166 IPRPYSFRPITAPFG---PYDVKVADLINPNGQWDVHLISYIFCEEDRDLILSMPVS 218

BLAST of Lcy05g017380 vs. ExPASy TrEMBL
Match: A0A803Q105 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 174.9 bits (442), Expect = 4.0e-40
Identity = 84/175 (48.00%), Postives = 108/175 (61.71%), Query Frame = 0

Query: 1   MMARFWWGSTETKRRIHWKKGNKLCLPKELGGLNFRDLVLFNKALLAKQVWRLFTNPNLL 60
           MMARFWWGS+   ++IHWKK   LC  K  GG+ FR  V FN+ALLAKQ WR+F  PN L
Sbjct: 1   MMARFWWGSSTDNKKIHWKKWKFLCKSKGDGGMGFRSFVHFNQALLAKQAWRIFQQPNSL 60

Query: 61  VSKVIKGIYAPHDSLLIAPVKSNCSVFWRGFVWARELLRSGLRKRIGNGLTTYFFTDPWI 120
           +S+V+KG Y PH   + A     CS+ W+G VW RELL  GLR ++G+GL+    TD WI
Sbjct: 61  LSRVLKGRYYPHSEFMTASANGLCSLTWQGIVWGRELLAKGLRLKVGSGLSIACGTDSWI 120

Query: 121 PKEITFKPSRAIGVELHEELRVSEFITPSLGWNMDKLKTMVSEEDVNLIATIPIS 176
           P    FK    +G   +    VS++IT    WN+D L+   S  DV+ I TIP+S
Sbjct: 121 PGHDNFKAFCYLGPSSN---HVSDYITTDREWNIDLLQADFSPPDVDRILTIPLS 172

BLAST of Lcy05g017380 vs. ExPASy TrEMBL
Match: A0A803NWD5 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 166.8 bits (421), Expect = 1.1e-37
Identity = 80/192 (41.67%), Postives = 114/192 (59.38%), Query Frame = 0

Query: 1   MMARFWWGSTETKRRIHWKKGNKLCLPKELGGLNFRDLVLFNKALLAKQVWRLFTNPNLL 60
           ++ARFWWGS+   R+IHWK    LC  K +GGL FR L+ FN+A+LAKQ WR+FT P+ L
Sbjct: 383 VIARFWWGSSRDSRKIHWKNWQSLCRSKFVGGLGFRSLIHFNQAMLAKQAWRIFTQPDSL 442

Query: 61  VSKVIKGIYAPHDSLLIAPVKSNCSVFWRGFVWARELLRSGLRKRIGNGLTTYFFTDPWI 120
           +S  +K  Y PH S+L A V  N S  WR  +W R+LL  GL  ++G+G T   FTD WI
Sbjct: 443 LSLTLKARYFPHSSILAAKVGHNPSFSWRSILWGRDLLVFGLVWKVGDGETINTFTDHWI 502

Query: 121 PKEITFKPSRAIGVELHEELRVSEFITPSLGWNMDKLKTMVSEEDVNLIATIPISSIQLY 180
           P     +P   +    +++L++S FI  S  WN+D+L +      VN I  +P S +   
Sbjct: 503 PNSKFRQPLCDLD---YQQLKLSYFIDQSGSWNLDRLNSCFDASSVNDILRVPFSGLDGK 562

Query: 181 TDAVIGSDQTGV 193
            + + G D +G+
Sbjct: 563 DEQIWGRDNSGL 571

BLAST of Lcy05g017380 vs. ExPASy TrEMBL
Match: A0A6J1DX30 (uncharacterized protein LOC111024874 OS=Momordica charantia OX=3673 GN=LOC111024874 PE=4 SV=1)

HSP 1 Score: 166.0 bits (419), Expect = 1.9e-37
Identity = 84/178 (47.19%), Postives = 109/178 (61.24%), Query Frame = 0

Query: 14   RRIHWKKGNKLCLPKELGGLNFRDLVLFNKALLAKQVWRLFTNPNLLVSKVIKGIYAPHD 73
            R++HW K  ++C PKE GGLNFRDL  FN+AL+AK VWR   +PNLLVSKV+K  Y    
Sbjct: 927  RKLHWMKWGRMCYPKECGGLNFRDLEGFNQALVAKHVWRFLQHPNLLVSKVLKHKYFKDT 986

Query: 74   SLLIAPVKSNCSVFWRGFVWARELLRSGLRKRIGNGLTTYFFTDPWIPKEITFKPSRAIG 133
            SLL A   S  S FW+GF+W R+LL  GLR R+GNG T   F+DPW+P+  TFKP R   
Sbjct: 987  SLLQASNNSKSSYFWKGFLWGRDLLVKGLRLRVGNGSTIKAFSDPWLPRPTTFKPLRFNN 1046

Query: 134  VELHEELRVSEFITPSLGWNMDKLKTMVSEEDVNLIATIPISSIQLYTDAVIGSDQTG 192
              L  +  V+ FIT    W++  +      ED +LI ++PISS  L    +   D+ G
Sbjct: 1047 GAL--DTTVASFITADGNWDVTSISHSFCNEDRDLILSMPISSYNLQDSWLWHYDKRG 1102

BLAST of Lcy05g017380 vs. ExPASy TrEMBL
Match: A0A803NM27 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 165.6 bits (418), Expect = 2.4e-37
Identity = 79/175 (45.14%), Postives = 103/175 (58.86%), Query Frame = 0

Query: 1    MMARFWWGSTETKRRIHWKKGNKLCLPKELGGLNFRDLVLFNKALLAKQVWRLFTNPNLL 60
            +M+ FWWGST  K++IHWK+   LC  K  GGL FR+ + FN+ALLAKQ WRLF NP  L
Sbjct: 1243 LMSNFWWGSTSDKKKIHWKQWKFLCKSKLEGGLGFRNFIHFNQALLAKQAWRLFQNPESL 1302

Query: 61   VSKVIKGIYAPHDSLLIAPVKSNCSVFWRGFVWARELLRSGLRKRIGNGLTTYFFTDPWI 120
            + +V+KG Y      L A      S+ W+GF W RELL+ GLR ++GNG      TDPWI
Sbjct: 1303 LFRVLKGRYFSRSDFLSAATCGVSSLTWQGFCWGRELLKKGLRLQVGNGFDIACATDPWI 1362

Query: 121  PKEITFKPSRAIGVELHEELRVSEFITPSLGWNMDKLKTMVSEEDVNLIATIPIS 176
            P    F P    G   +    V+++ITP   WN+ KL    S  DV  I ++P+S
Sbjct: 1363 PGNSIFTPIYFTGAPTN---TVADYITPEKEWNVSKLNADFSSADVERILSLPLS 1414

BLAST of Lcy05g017380 vs. NCBI nr
Match: XP_022131662.1 (uncharacterized protein LOC111004787 [Momordica charantia])

HSP 1 Score: 183.7 bits (465), Expect = 1.8e-42
Identity = 87/177 (49.15%), Postives = 123/177 (69.49%), Query Frame = 0

Query: 1   MMARFWWGSTETKRRIHWKKGNKLCLPKELGGLNFRDLVLFNKALLAKQVWRLFTNPNLL 60
           M ARFWWGS+   +++HW    ++CLPKELGGLNFRDL  FN+AL+AKQVWR+  NPN+L
Sbjct: 46  MFARFWWGSSNDTKKLHWMSWERMCLPKELGGLNFRDLEGFNQALVAKQVWRVLQNPNIL 105

Query: 61  VSKVIKGIYAPHDSLLI-APVKSNCSVFWRGFVWARELLRSGLRKRIGNGLTTYFFTDPW 120
           VS+V+K  Y  HDSL++ A    N S FW+GF+W R+LL  GLR R+GNG T   F+DPW
Sbjct: 106 VSRVLKAKYF-HDSLVLQATHLRNQSYFWKGFIWGRDLLIKGLRSRVGNGSTINIFSDPW 165

Query: 121 IPKEITFKPSRA-IGVELHEELRVSEFITPSLGWNMDKLKTMVSEEDVNLIATIPIS 176
           IP+  +F+P  A  G     +++V++ I P+  W++  +  +  EED +LI ++P+S
Sbjct: 166 IPRPYSFRPITAPFG---PYDVKVADLINPNGQWDVHLISYIFCEEDRDLILSMPVS 218

BLAST of Lcy05g017380 vs. NCBI nr
Match: XP_030483769.1 (uncharacterized protein LOC115700339 [Cannabis sativa])

HSP 1 Score: 177.6 bits (449), Expect = 1.3e-40
Identity = 85/175 (48.57%), Postives = 108/175 (61.71%), Query Frame = 0

Query: 1   MMARFWWGSTETKRRIHWKKGNKLCLPKELGGLNFRDLVLFNKALLAKQVWRLFTNPNLL 60
           MMARFWWGS    ++IHWKK   LC  K  GG+ FR  V FN+ALLAKQ WR+F  PN L
Sbjct: 799 MMARFWWGSATDNKKIHWKKWKFLCKSKGDGGMGFRSFVHFNQALLAKQAWRIFQQPNSL 858

Query: 61  VSKVIKGIYAPHDSLLIAPVKSNCSVFWRGFVWARELLRSGLRKRIGNGLTTYFFTDPWI 120
           +S+V+KG Y PH   + A     CS+ W+G VW RELL  GLR ++G+GL+    TD WI
Sbjct: 859 LSRVLKGRYYPHSDFMTASANGLCSLTWQGIVWGRELLAKGLRLKVGSGLSIACGTDSWI 918

Query: 121 PKEITFKPSRAIGVELHEELRVSEFITPSLGWNMDKLKTMVSEEDVNLIATIPIS 176
           P    FK    +G   +    VS++ITP   WN+D L+   S  DV+ I TIP+S
Sbjct: 919 PGHDNFKAFCYLGPSSN---HVSDYITPDREWNIDLLQADFSPPDVDRILTIPLS 970

BLAST of Lcy05g017380 vs. NCBI nr
Match: XP_030505522.1 (uncharacterized protein LOC115720515 [Cannabis sativa])

HSP 1 Score: 174.1 bits (440), Expect = 1.4e-39
Identity = 84/175 (48.00%), Postives = 110/175 (62.86%), Query Frame = 0

Query: 1   MMARFWWGSTETKRRIHWKKGNKLCLPKELGGLNFRDLVLFNKALLAKQVWRLFTNPNLL 60
           +MAR+WWGS ++KR+IHW+   KLC  K  GGL FR  V +N+ALLAKQ WR+  NP  +
Sbjct: 527 LMARYWWGSFQSKRKIHWRAWQKLCFSKRKGGLGFRRFVQYNQALLAKQAWRVLINPTSI 586

Query: 61  VSKVIKGIYAPHDSLLIAPVKSNCSVFWRGFVWARELLRSGLRKRIGNGLTTYFFTDPWI 120
           +++V+K  Y P  S L A   S+ S  WRG VW +ELL  GLR+RIGNG  T  F DPWI
Sbjct: 587 LAQVLKARYFPQQSFLEATESSHPSQIWRGIVWGKELLIKGLRRRIGNGANTRVFKDPWI 646

Query: 121 PKEITFKPSRAIGVELHEELRVSEFITPSLGWNMDKLKTMVSEEDVNLIATIPIS 176
           P+  +F P   I  E+   + VSE I  S  WN+D +  + S  D  LI +IPI+
Sbjct: 647 PRPPSFLP---ITKEVGNLMMVSELIEQSGQWNIDLIHQVFSTPDSQLILSIPIT 698

BLAST of Lcy05g017380 vs. NCBI nr
Match: XP_022158377.1 (uncharacterized protein LOC111024874 [Momordica charantia])

HSP 1 Score: 166.0 bits (419), Expect = 3.9e-37
Identity = 84/178 (47.19%), Postives = 109/178 (61.24%), Query Frame = 0

Query: 14   RRIHWKKGNKLCLPKELGGLNFRDLVLFNKALLAKQVWRLFTNPNLLVSKVIKGIYAPHD 73
            R++HW K  ++C PKE GGLNFRDL  FN+AL+AK VWR   +PNLLVSKV+K  Y    
Sbjct: 927  RKLHWMKWGRMCYPKECGGLNFRDLEGFNQALVAKHVWRFLQHPNLLVSKVLKHKYFKDT 986

Query: 74   SLLIAPVKSNCSVFWRGFVWARELLRSGLRKRIGNGLTTYFFTDPWIPKEITFKPSRAIG 133
            SLL A   S  S FW+GF+W R+LL  GLR R+GNG T   F+DPW+P+  TFKP R   
Sbjct: 987  SLLQASNNSKSSYFWKGFLWGRDLLVKGLRLRVGNGSTIKAFSDPWLPRPTTFKPLRFNN 1046

Query: 134  VELHEELRVSEFITPSLGWNMDKLKTMVSEEDVNLIATIPISSIQLYTDAVIGSDQTG 192
              L  +  V+ FIT    W++  +      ED +LI ++PISS  L    +   D+ G
Sbjct: 1047 GAL--DTTVASFITADGNWDVTSISHSFCNEDRDLILSMPISSYNLQDSWLWHYDKRG 1102

BLAST of Lcy05g017380 vs. NCBI nr
Match: XP_030486817.1 (uncharacterized protein LOC115703723 [Cannabis sativa])

HSP 1 Score: 162.2 bits (409), Expect = 5.6e-36
Identity = 77/194 (39.69%), Postives = 115/194 (59.28%), Query Frame = 0

Query: 1   MMARFWWGSTETKRRIHWKKGNKLCLPKELGGLNFRDLVLFNKALLAKQVWRLFTNPNLL 60
           +MARFWWGS+   R+IHW+    LC  K +GGL FR L+ FN+A+LAKQ WR+FT P+ L
Sbjct: 700 VMARFWWGSSGDSRKIHWRNWQSLCRSKFVGGLGFRSLIHFNQAMLAKQAWRIFTQPDSL 759

Query: 61  VSKVIKGIYAPHDSLLIAPVKSNCSVFWRGFVWARELLRSGLRKRIGNGLTTYFFTDPWI 120
           +S  +K  Y P+  +L A V  N S  WR  +W R+LL SGL  ++GNG T     D WI
Sbjct: 760 LSLTLKARYFPNSFILDAKVGHNPSFCWRSILWGRDLLASGLVWKVGNGETIDTLKDHWI 819

Query: 121 PKEITFKPSRAIGVELHEELRVSEFITPSLGWNMDKLKTMVSEEDVNLIATIPISSIQLY 180
           P     +  + +    H++ ++S FI P   WNMD+L++   +  +N I  +P S ++  
Sbjct: 820 PNS---RYKQTLCDLDHQQSKLSYFIDPLGSWNMDRLRSCFDDATINDILNVPFSRLEGK 879

Query: 181 TDAVIGSDQTGVGY 195
            + + G + +G+ Y
Sbjct: 880 DEQIWGRESSGLFY 890

BLAST of Lcy05g017380 vs. TAIR 10
Match: ATMG00310.1 (RNA-directed DNA polymerase (reverse transcriptase)-related family protein )

HSP 1 Score: 115.5 bits (288), Expect = 5.6e-26
Identity = 57/128 (44.53%), Postives = 75/128 (58.59%), Query Frame = 0

Query: 2   MARFWWGSTETKRRIHWKKGNKLCLPKE-LGGLNFRDLVLFNKALLAKQVWRLFTNPNLL 61
           M  FWW S E KR+I W    KLC  KE  GGL FRDL  FN+ALLAKQ +R+   P+ L
Sbjct: 25  MTEFWWSSCENKRKISWVAWQKLCKSKEDDGGLGFRDLGWFNQALLAKQSFRIIHQPHTL 84

Query: 62  VSKVIKGIYAPHDSLLIAPVKSNCSVFWRGFVWARELLRSGLRKRIGNGLTTYFFTDPWI 121
           +S++++  Y PH S++   V +  S  WR  +  RELL  GL + IG+G+ T  + D WI
Sbjct: 85  LSRLLRSRYFPHSSMMECSVGTRPSYAWRSIIHGRELLSRGLLRTIGDGIHTKVWLDRWI 144

Query: 122 PKEITFKP 129
             E    P
Sbjct: 145 MDETPLPP 152

BLAST of Lcy05g017380 vs. TAIR 10
Match: AT4G29090.1 (Ribonuclease H-like superfamily protein )

HSP 1 Score: 99.8 bits (247), Expect = 3.2e-21
Identity = 56/179 (31.28%), Postives = 88/179 (49.16%), Query Frame = 0

Query: 1   MMARFWWGSTETKRRIHWKKGNKLCLPKELGGLNFRDLVLFNKALLAKQVWRLFTNPNLL 60
           ++A FWW + +  + +HWK  + L   K  GG+ F+D+  FN ALL KQ+WR+ + P  L
Sbjct: 24  VLADFWWRNKQEAKGMHWKAWDHLSCYKAEGGIGFKDIEAFNLALLGKQMWRMLSRPESL 83

Query: 61  VSKVIKGIYAPHDSLLIAPVKSNCSVFWRGFVWARELLRSGLRKRIGNGLTTYFFTDPWI 120
           ++KV K  Y      L AP+ S  S  W+    ++E+LR G R  +GNG     +   W+
Sbjct: 84  MAKVFKSRYFHKSDPLNAPLGSRPSFVWKSIHASQEILRQGARAVVGNGEDIIIWRHKWL 143

Query: 121 ---PKEITFKPSRAIGVE---LHEELRVSEFITPS-LGWNMDKLKTMVSEEDVNLIATI 173
              P     +  R    E   +   L+VS+ I  S   W  D ++ +  E +  LI  +
Sbjct: 144 DSKPASAALRMQRVPPQEYASVSSILKVSDLIDESGREWRKDVIEMLFPEVERKLIGEL 202

BLAST of Lcy05g017380 vs. TAIR 10
Match: AT3G25720.1 (RNA-directed DNA polymerase (reverse transcriptase)-related family protein )

HSP 1 Score: 50.8 bits (120), Expect = 1.7e-06
Identity = 36/104 (34.62%), Postives = 47/104 (45.19%), Query Frame = 0

Query: 24  LCLPKELGGLNFRDLVLFNKALLAKQVWRLFTNPNLL-----VSKVIKGI-YAPHDSLLI 83
           +CLPK  GGL  R    +N  L  K VWRLF+    L         ++G+  A       
Sbjct: 18  VCLPKAEGGLGLRWFSEWNTTLNLKLVWRLFSGGGSLWVDWHRYHHLQGLGDASVSKFWT 77

Query: 84  APVKSNCSVFWRGFVWARELLRSGLRKRIGNGLTTYFFTDPWIP 122
           +    + S  W+  +  R L    LR  IGNGLT  F+TD W P
Sbjct: 78  SQELVSDSWNWKCLLRLRPLAERFLRCNIGNGLTARFWTDNWTP 121

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
P932957.9e-2544.53Uncharacterized mitochondrial protein AtMg00310 OS=Arabidopsis thaliana OX=3702 ... [more]
Match NameE-valueIdentityDescription
A0A6J1BRN08.7e-4349.15uncharacterized protein LOC111004787 OS=Momordica charantia OX=3673 GN=LOC111004... [more]
A0A803Q1054.0e-4048.00Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1[more]
A0A803NWD51.1e-3741.67Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1[more]
A0A6J1DX301.9e-3747.19uncharacterized protein LOC111024874 OS=Momordica charantia OX=3673 GN=LOC111024... [more]
A0A803NM272.4e-3745.14Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
XP_022131662.11.8e-4249.15uncharacterized protein LOC111004787 [Momordica charantia][more]
XP_030483769.11.3e-4048.57uncharacterized protein LOC115700339 [Cannabis sativa][more]
XP_030505522.11.4e-3948.00uncharacterized protein LOC115720515 [Cannabis sativa][more]
XP_022158377.13.9e-3747.19uncharacterized protein LOC111024874 [Momordica charantia][more]
XP_030486817.15.6e-3639.69uncharacterized protein LOC115703723 [Cannabis sativa][more]
Match NameE-valueIdentityDescription
ATMG00310.15.6e-2644.53RNA-directed DNA polymerase (reverse transcriptase)-related family protein [more]
AT4G29090.13.2e-2131.28Ribonuclease H-like superfamily protein [more]
AT3G25720.11.7e-0634.62RNA-directed DNA polymerase (reverse transcriptase)-related family protein [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33116REVERSE TRANSCRIPTASE ZINC-BINDING DOMAIN-CONTAINING PROTEIN-RELATED-RELATEDcoord: 2..175
NoneNo IPR availablePANTHERPTHR33116:SF41SUBFAMILY NOT NAMEDcoord: 2..175

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lcy05g017380.1Lcy05g017380.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003824 catalytic activity