Lcy05g017370 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy05g017370
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	Reverse transcriptase domain-containing protein
Location	Chr05: 29879361 .. 29879876 (+)
RNA-Seq Expression	Lcy05g017370
Synteny	Lcy05g017370

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAAATGTTCGGACTCCATCCTTTTCAATATTACTGAATGGGGTCCCTTCGAGGCAAATCATTCCTCAAAGAGGACTTCGTCAGAGGGATCCCTTATCTCCCTATTTGTTTTTGCTTGAATCTGAAGTGTTATCTTCACTTATATCAGGGGCGCAGTCAAAGAAACATATTTCTGGTATAAAACCTGGGAAATTTTGCCCAAAAATTTCACATCTTTTCTTTGCAGATGATAGCTTAATTTTTTGCAAAGTATCTTTGGAACAGGTGTGGACTCTGCGTAATATTTTGTCACGATATGAGAAAGCATCTGGTCAGGTGGTTAATATTAGTAAGTCAGCGCTCTTTTTTTCACCAAATGTGAAGCAAGAATTTCGATCTGTAATTTCAGATTTGATTGGTATGCCTGTGGTTGATAATTTTGGACGATATTTGGGTGTTTCGTCCAATTTTACCAGGAAGAGGCGTGATAATTTTAGAGATAAAAAGCAACGAGTATGGCAGACTCTTCAATGA

mRNA sequence

ATGGAAAATGTTCGGACTCCATCCTTTTCAATATTACTGAATGGGGTCCCTTCGAGGCAAATCATTCCTCAAAGAGGACTTCGTCAGAGGGATCCCTTATCTCCCTATTTGTTTTTGCTTGAATCTGAAGTGTTATCTTCACTTATATCAGGGGCGCAGTCAAAGAAACATATTTCTGGTATAAAACCTGGGAAATTTTGCCCAAAAATTTCACATCTTTTCTTTGCAGATGATAGCTTAATTTTTTGCAAAGTATCTTTGGAACAGGTGTGGACTCTGCGTAATATTTTGTCACGATATGAGAAAGCATCTGGTCAGGTGGTTAATATTAGTAAGTCAGCGCTCTTTTTTTCACCAAATGTGAAGCAAGAATTTCGATCTGTAATTTCAGATTTGATTGGTATGCCTGTGGTTGATAATTTTGGACGATATTTGGGTGTTTCGTCCAATTTTACCAGGAAGAGGCGTGATAATTTTAGAGATAAAAAGCAACGAGTATGGCAGACTCTTCAATGA

Coding sequence (CDS)

ATGGAAAATGTTCGGACTCCATCCTTTTCAATATTACTGAATGGGGTCCCTTCGAGGCAAATCATTCCTCAAAGAGGACTTCGTCAGAGGGATCCCTTATCTCCCTATTTGTTTTTGCTTGAATCTGAAGTGTTATCTTCACTTATATCAGGGGCGCAGTCAAAGAAACATATTTCTGGTATAAAACCTGGGAAATTTTGCCCAAAAATTTCACATCTTTTCTTTGCAGATGATAGCTTAATTTTTTGCAAAGTATCTTTGGAACAGGTGTGGACTCTGCGTAATATTTTGTCACGATATGAGAAAGCATCTGGTCAGGTGGTTAATATTAGTAAGTCAGCGCTCTTTTTTTCACCAAATGTGAAGCAAGAATTTCGATCTGTAATTTCAGATTTGATTGGTATGCCTGTGGTTGATAATTTTGGACGATATTTGGGTGTTTCGTCCAATTTTACCAGGAAGAGGCGTGATAATTTTAGAGATAAAAAGCAACGAGTATGGCAGACTCTTCAATGA

Protein sequence

MENVRTPSFSILLNGVPSRQIIPQRGLRQRDPLSPYLFLLESEVLSSLISGAQSKKHISGIKPGKFCPKISHLFFADDSLIFCKVSLEQVWTLRNILSRYEKASGQVVNISKSALFFSPNVKQEFRSVISDLIGMPVVDNFGRYLGVSSNFTRKRRDNFRDKKQRVWQTLQ

Homology

[Close]

BLAST of Lcy05g017370 vs. ExPASy Swiss-Prot
Match: P92555 (Uncharacterized mitochondrial protein AtMg01250 OS=Arabidopsis thaliana OX=3702 GN=AtMg01250 PE=4 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 1.0e-13
Identity = 45/107 (42.06%), Postives = 61/107 (57.01%), Query Frame = 0


Query: 12  LLNGVPSRQIIPQRGLRQRDPLSPYLFLLESEVLSSLISGAQSKKHISGIKPGKFCPKIS 71
           ++NG P   + P RGLRQ DPLSPYLF+L +EVLS L   AQ +  + GI+     P+I+
Sbjct: 13  IINGAPQGLVTPSRGLRQGDPLSPYLFILCTEVLSGLCRRAQEQGRLPGIRVSNNSPRIN 72

Query: 72  HLFFADDSLIFCKVSL-EQVWTLRNILSRYEKASGQVVNISKSALFF 118
           HL FADD+     + L  Q+W +  +  R     G  VN   S L+F
Sbjct: 73  HLLFADDTSSARWIPLAAQIWPIFFLSMRL--FQGNPVNHPMSNLYF 117

[Close]

BLAST of Lcy05g017370 vs. ExPASy Swiss-Prot
Match: P11369 (LINE-1 retrotransposable element ORF2 protein OS=Mus musculus OX=10090 GN=Pol PE=1 SV=2)

HSP 1 Score: 65.9 bits (159), Expect = 5.2e-10
Identity = 54/169 (31.95%), Postives = 85/169 (50.30%), Query Frame = 0


Query: 7   PSFSILLNGVPSRQIIPQRGLRQRDPLSPYLFLLESEVLSSLISGAQSKKHISGIKPGKF 66
           P  +I +NG     I  + G RQ  PLSPYLF +  EVL+  I   + +K I GI+ GK 
Sbjct: 644 PVANIKVNGEKLEAIPLKSGTRQGCPLSPYLFNIVLEVLARAI---RQQKEIKGIQIGKE 703

Query: 67  CPKISHLFFADDSLIFCKVSLEQVWTLRNILSRYEKASGQVVNISKSALFFSPNVKQEFR 126
             KIS L  ADD +++          L N+++ + +  G  +N +KS  F     KQ  +
Sbjct: 704 EVKISLL--ADDMIVYISDPKNSTRELLNLINSFGEVVGYKINSNKSMAFLYTKNKQAEK 763

Query: 127 SVISDLIGMPVVDNFGRYLGVSSNFTRKRRD----NFRDKKQRVWQTLQ 172
             I +     +V N  +YLGV+   T++ +D    NF+  K+ + + L+
Sbjct: 764 E-IRETTPFSIVTNNIKYLGVT--LTKEVKDLYDKNFKSLKKEIKEDLR 804

[Close]

BLAST of Lcy05g017370 vs. ExPASy TrEMBL
Match: A0A2K3JMB0 (Ribonuclease H OS=Trifolium pratense OX=57577 GN=L195_g048799 PE=4 SV=1)

HSP 1 Score: 169.9 bits (429), Expect = 9.5e-39
Identity = 83/171 (48.54%), Postives = 119/171 (69.59%), Query Frame = 0


Query: 1   MENVRTPSFSILLNGVPSRQIIPQRGLRQRDPLSPYLFLLESEVLSSLISGAQSKKHISG 60
           M+ V T  FSIL+NG PS++ IPQRGLRQ DPLSPYLF+L ++VLS LIS AQ +K I G
Sbjct: 31  MKCVSTVKFSILINGYPSKEFIPQRGLRQGDPLSPYLFILCADVLSRLISKAQKEKLIHG 90

Query: 61  IKPGKFCPKISHLFFADDSLIFCKVSLEQVWTLRNILSRYEKASGQVVNISKSALFFSPN 120
           +K     P+ISHLFFADDSLIFC+ S  +V T+  I+  Y+ ASGQ+VN++KS + FS  
Sbjct: 91  VKISHRAPEISHLFFADDSLIFCRASKGEVSTIHQIIQAYQNASGQLVNLNKSEMVFSKG 150

Query: 121 VKQEFRSVISDLIGMPVVDNFGRYLGVSSNFTRKRRDNFRDKKQRVWQTLQ 172
           V    +  +++++ M +VD+F +YLG+     R ++  F   K+++W+ L+
Sbjct: 151 VPNNIKQEVANILPMQMVDHFSKYLGMPIVQGRSKKQIFNFMKEKIWKKLK 201

[Close]

BLAST of Lcy05g017370 vs. ExPASy TrEMBL
Match: A0A2K3N033 (Ribonuclease H (Fragment) OS=Trifolium pratense OX=57577 GN=L195_g019590 PE=4 SV=1)

HSP 1 Score: 168.7 bits (426), Expect = 2.1e-38
Identity = 81/171 (47.37%), Postives = 119/171 (69.59%), Query Frame = 0


Query: 1   MENVRTPSFSILLNGVPSRQIIPQRGLRQRDPLSPYLFLLESEVLSSLISGAQSKKHISG 60
           M+ V T  FSI++NG PSRQ  PQRGLRQ DPLSPYLF++ ++VLS LIS AQ +  I G
Sbjct: 614 MKCVTTVKFSIIINGYPSRQFYPQRGLRQGDPLSPYLFIICADVLSGLISKAQQENLIHG 673

Query: 61  IKPGKFCPKISHLFFADDSLIFCKVSLEQVWTLRNILSRYEKASGQVVNISKSALFFSPN 120
           IK  +  P++SHLFFADDSLIFC+ + ++V T+ NI+  Y+ ASGQ+VN++KS + FS  
Sbjct: 674 IKISQGAPEVSHLFFADDSLIFCRANKKEVSTINNIIQVYQNASGQLVNLAKSEMVFSKG 733

Query: 121 VKQEFRSVISDLIGMPVVDNFGRYLGVSSNFTRKRRDNFRDKKQRVWQTLQ 172
           V  E +  ++ ++ M   ++F +YLG+   + R ++  F   K+++WQ L+
Sbjct: 734 VTTETKKDVTTILPMKTPEHFSKYLGMPIVYGRSKKQIFNHIKEKIWQKLK 784

[Close]

BLAST of Lcy05g017370 vs. ExPASy TrEMBL
Match: A0A2Z6NRI2 (Reverse transcriptase domain-containing protein OS=Trifolium subterraneum OX=3900 GN=TSUD_56760 PE=4 SV=1)

HSP 1 Score: 168.3 bits (425), Expect = 2.8e-38
Identity = 84/168 (50.00%), Postives = 117/168 (69.64%), Query Frame = 0


Query: 4   VRTPSFSILLNGVPSRQIIPQRGLRQRDPLSPYLFLLESEVLSSLISGAQSKKHISGIKP 63
           V T +FSIL+NG P+RQI PQRG+RQ DPLSPYLF+L ++V S LI+ AQS K I G+  
Sbjct: 190 VSTVTFSILINGKPTRQIHPQRGIRQGDPLSPYLFILCADVFSGLITKAQSNKIIHGVTV 249

Query: 64  GKFCPKISHLFFADDSLIFCKVSLEQVWTLRNILSRYEKASGQVVNISKSALFFSPNVKQ 123
               P+I+HLFFADDSLIFC+ + E+   ++ I++ YE+ASGQ+VN ++S + FS  VK 
Sbjct: 250 APGAPEITHLFFADDSLIFCRANEEEATQMKVIITMYEQASGQLVNYNESEILFSKKVKP 309

Query: 124 EFRSVISDLIGMPVVDNFGRYLGVSSNFTRKRRDNFRDKKQRVWQTLQ 172
           E R  I  ++ MPVVD+F +YLG  +   R ++  F   + RVW+ L+
Sbjct: 310 ENRQAIHTILPMPVVDHFDKYLGQPTVIGRSKKQTFNYIQDRVWKKLK 357

[Close]

BLAST of Lcy05g017370 vs. ExPASy TrEMBL
Match: A0A2K3NXF2 (Ribonuclease H OS=Trifolium pratense OX=57577 GN=L195_g004217 PE=4 SV=1)

HSP 1 Score: 164.5 bits (415), Expect = 4.0e-37
Identity = 79/171 (46.20%), Postives = 117/171 (68.42%), Query Frame = 0


Query: 1   MENVRTPSFSILLNGVPSRQIIPQRGLRQRDPLSPYLFLLESEVLSSLISGAQSKKHISG 60
           M+ V T SFSIL+NG P++  +P RGLRQ DPLSPYLF+L ++VLS+LIS AQ  K I G
Sbjct: 788 MQCVTTVSFSILINGSPTKAFLPTRGLRQGDPLSPYLFILCADVLSALISSAQENKLIHG 847

Query: 61  IKPGKFCPKISHLFFADDSLIFCKVSLEQVWTLRNILSRYEKASGQVVNISKSALFFSPN 120
           +K     P+I+HLFFADDS++FC+ ++E+   ++ ++S+Y++ASGQ+VN  KS L FS  
Sbjct: 848 VKIAPRAPEITHLFFADDSIMFCRATIEETEHMKMLISKYQQASGQLVNYHKSELIFSKK 907

Query: 121 VKQEFRSVISDLIGMPVVDNFGRYLGVSSNFTRKRRDNFRDKKQRVWQTLQ 172
           V    R  I  ++ M +VD+F +YLG  +   R ++  F   + +VW+ L+
Sbjct: 908 VNHSIRMTIQQILPMTMVDHFSKYLGQPTVIGRSKKQAFSFIQDKVWKKLK 958

[Close]

BLAST of Lcy05g017370 vs. ExPASy TrEMBL
Match: A0A2K3NX86 (Ribonuclease H (Fragment) OS=Trifolium pratense OX=57577 GN=L195_g004150 PE=4 SV=1)

HSP 1 Score: 164.5 bits (415), Expect = 4.0e-37
Identity = 79/171 (46.20%), Postives = 117/171 (68.42%), Query Frame = 0


Query: 1   MENVRTPSFSILLNGVPSRQIIPQRGLRQRDPLSPYLFLLESEVLSSLISGAQSKKHISG 60
           M+ V T SFSIL+NG P++  +P RGLRQ DPLSPYLF+L ++VLS+LIS AQ  K I G
Sbjct: 788 MQCVTTVSFSILINGSPTKAFLPTRGLRQGDPLSPYLFILCADVLSALISSAQENKLIHG 847

Query: 61  IKPGKFCPKISHLFFADDSLIFCKVSLEQVWTLRNILSRYEKASGQVVNISKSALFFSPN 120
           +K     P+I+HLFFADDS++FC+ ++E+   ++ ++S+Y++ASGQ+VN  KS L FS  
Sbjct: 848 VKIAPRAPEITHLFFADDSIMFCRATIEETEHMKMLISKYQQASGQLVNYHKSELIFSKK 907

Query: 121 VKQEFRSVISDLIGMPVVDNFGRYLGVSSNFTRKRRDNFRDKKQRVWQTLQ 172
           V    R  I  ++ M +VD+F +YLG  +   R ++  F   + +VW+ L+
Sbjct: 908 VNHSIRMTIQQILPMTMVDHFSKYLGQPTVIGRSKKQAFSFIQDKVWKKLK 958

[Close]

BLAST of Lcy05g017370 vs. NCBI nr
Match: PNX55172.1 (ribonuclease H [Trifolium pratense])

HSP 1 Score: 169.9 bits (429), Expect = 2.0e-38
Identity = 83/171 (48.54%), Postives = 119/171 (69.59%), Query Frame = 0


Query: 1   MENVRTPSFSILLNGVPSRQIIPQRGLRQRDPLSPYLFLLESEVLSSLISGAQSKKHISG 60
           M+ V T  FSIL+NG PS++ IPQRGLRQ DPLSPYLF+L ++VLS LIS AQ +K I G
Sbjct: 31  MKCVSTVKFSILINGYPSKEFIPQRGLRQGDPLSPYLFILCADVLSRLISKAQKEKLIHG 90

Query: 61  IKPGKFCPKISHLFFADDSLIFCKVSLEQVWTLRNILSRYEKASGQVVNISKSALFFSPN 120
           +K     P+ISHLFFADDSLIFC+ S  +V T+  I+  Y+ ASGQ+VN++KS + FS  
Sbjct: 91  VKISHRAPEISHLFFADDSLIFCRASKGEVSTIHQIIQAYQNASGQLVNLNKSEMVFSKG 150

Query: 121 VKQEFRSVISDLIGMPVVDNFGRYLGVSSNFTRKRRDNFRDKKQRVWQTLQ 172
           V    +  +++++ M +VD+F +YLG+     R ++  F   K+++W+ L+
Sbjct: 151 VPNNIKQEVANILPMQMVDHFSKYLGMPIVQGRSKKQIFNFMKEKIWKKLK 201

[Close]

BLAST of Lcy05g017370 vs. NCBI nr
Match: PNX96384.1 (ribonuclease H, partial [Trifolium pratense])

HSP 1 Score: 168.7 bits (426), Expect = 4.4e-38
Identity = 81/171 (47.37%), Postives = 119/171 (69.59%), Query Frame = 0


Query: 1   MENVRTPSFSILLNGVPSRQIIPQRGLRQRDPLSPYLFLLESEVLSSLISGAQSKKHISG 60
           M+ V T  FSI++NG PSRQ  PQRGLRQ DPLSPYLF++ ++VLS LIS AQ +  I G
Sbjct: 614 MKCVTTVKFSIIINGYPSRQFYPQRGLRQGDPLSPYLFIICADVLSGLISKAQQENLIHG 673

Query: 61  IKPGKFCPKISHLFFADDSLIFCKVSLEQVWTLRNILSRYEKASGQVVNISKSALFFSPN 120
           IK  +  P++SHLFFADDSLIFC+ + ++V T+ NI+  Y+ ASGQ+VN++KS + FS  
Sbjct: 674 IKISQGAPEVSHLFFADDSLIFCRANKKEVSTINNIIQVYQNASGQLVNLAKSEMVFSKG 733

Query: 121 VKQEFRSVISDLIGMPVVDNFGRYLGVSSNFTRKRRDNFRDKKQRVWQTLQ 172
           V  E +  ++ ++ M   ++F +YLG+   + R ++  F   K+++WQ L+
Sbjct: 734 VTTETKKDVTTILPMKTPEHFSKYLGMPIVYGRSKKQIFNHIKEKIWQKLK 784

[Close]

BLAST of Lcy05g017370 vs. NCBI nr
Match: GAU39350.1 (hypothetical protein TSUD_56760 [Trifolium subterraneum])

HSP 1 Score: 168.3 bits (425), Expect = 5.7e-38
Identity = 84/168 (50.00%), Postives = 117/168 (69.64%), Query Frame = 0


Query: 4   VRTPSFSILLNGVPSRQIIPQRGLRQRDPLSPYLFLLESEVLSSLISGAQSKKHISGIKP 63
           V T +FSIL+NG P+RQI PQRG+RQ DPLSPYLF+L ++V S LI+ AQS K I G+  
Sbjct: 190 VSTVTFSILINGKPTRQIHPQRGIRQGDPLSPYLFILCADVFSGLITKAQSNKIIHGVTV 249

Query: 64  GKFCPKISHLFFADDSLIFCKVSLEQVWTLRNILSRYEKASGQVVNISKSALFFSPNVKQ 123
               P+I+HLFFADDSLIFC+ + E+   ++ I++ YE+ASGQ+VN ++S + FS  VK 
Sbjct: 250 APGAPEITHLFFADDSLIFCRANEEEATQMKVIITMYEQASGQLVNYNESEILFSKKVKP 309

Query: 124 EFRSVISDLIGMPVVDNFGRYLGVSSNFTRKRRDNFRDKKQRVWQTLQ 172
           E R  I  ++ MPVVD+F +YLG  +   R ++  F   + RVW+ L+
Sbjct: 310 ENRQAIHTILPMPVVDHFDKYLGQPTVIGRSKKQTFNYIQDRVWKKLK 357

[Close]

BLAST of Lcy05g017370 vs. NCBI nr
Match: PNY08539.1 (ribonuclease H [Trifolium pratense])

HSP 1 Score: 164.5 bits (415), Expect = 8.2e-37
Identity = 79/171 (46.20%), Postives = 117/171 (68.42%), Query Frame = 0


Query: 1   MENVRTPSFSILLNGVPSRQIIPQRGLRQRDPLSPYLFLLESEVLSSLISGAQSKKHISG 60
           M+ V T SFSIL+NG P++  +P RGLRQ DPLSPYLF+L ++VLS+LIS AQ  K I G
Sbjct: 788 MQCVTTVSFSILINGSPTKAFLPTRGLRQGDPLSPYLFILCADVLSALISSAQENKLIHG 847

Query: 61  IKPGKFCPKISHLFFADDSLIFCKVSLEQVWTLRNILSRYEKASGQVVNISKSALFFSPN 120
           +K     P+I+HLFFADDS++FC+ ++E+   ++ ++S+Y++ASGQ+VN  KS L FS  
Sbjct: 848 VKIAPRAPEITHLFFADDSIMFCRATIEETEHMKMLISKYQQASGQLVNYHKSELIFSKK 907

Query: 121 VKQEFRSVISDLIGMPVVDNFGRYLGVSSNFTRKRRDNFRDKKQRVWQTLQ 172
           V    R  I  ++ M +VD+F +YLG  +   R ++  F   + +VW+ L+
Sbjct: 908 VNHSIRMTIQQILPMTMVDHFSKYLGQPTVIGRSKKQAFSFIQDKVWKKLK 958

[Close]

BLAST of Lcy05g017370 vs. NCBI nr
Match: PNY07715.1 (ribonuclease H [Trifolium pratense])

HSP 1 Score: 164.5 bits (415), Expect = 8.2e-37
Identity = 79/171 (46.20%), Postives = 117/171 (68.42%), Query Frame = 0


Query: 1   MENVRTPSFSILLNGVPSRQIIPQRGLRQRDPLSPYLFLLESEVLSSLISGAQSKKHISG 60
           M+ V T SFSIL+NG P++  +P RGLRQ DPLSPYLF+L ++VLS+LIS AQ  K I G
Sbjct: 788 MQCVTTVSFSILINGSPTKAFLPTRGLRQGDPLSPYLFILCADVLSALISSAQENKLIHG 847

Query: 61  IKPGKFCPKISHLFFADDSLIFCKVSLEQVWTLRNILSRYEKASGQVVNISKSALFFSPN 120
           +K     P+I+HLFFADDS++FC+ ++E+   ++ ++S+Y++ASGQ+VN  KS L FS  
Sbjct: 848 VKIAPRAPEITHLFFADDSIMFCRATIEETEHMKMLISKYQQASGQLVNYHKSELIFSKK 907

Query: 121 VKQEFRSVISDLIGMPVVDNFGRYLGVSSNFTRKRRDNFRDKKQRVWQTLQ 172
           V    R  I  ++ M +VD+F +YLG  +   R ++  F   + +VW+ L+
Sbjct: 908 VNHSIRMTIQQILPMTMVDHFSKYLGQPTVIGRSKKQAFSFIQDKVWKKLK 958

[Close]

BLAST of Lcy05g017370 vs. TAIR 10
Match: ATMG01250.1 (RNA-directed DNA polymerase (reverse transcriptase) )

HSP 1 Score: 78.2 bits (191), Expect = 7.2e-15
Identity = 45/107 (42.06%), Postives = 61/107 (57.01%), Query Frame = 0


Query: 12  LLNGVPSRQIIPQRGLRQRDPLSPYLFLLESEVLSSLISGAQSKKHISGIKPGKFCPKIS 71
           ++NG P   + P RGLRQ DPLSPYLF+L +EVLS L   AQ +  + GI+     P+I+
Sbjct: 13  IINGAPQGLVTPSRGLRQGDPLSPYLFILCTEVLSGLCRRAQEQGRLPGIRVSNNSPRIN 72

Query: 72  HLFFADDSLIFCKVSL-EQVWTLRNILSRYEKASGQVVNISKSALFF 118
           HL FADD+     + L  Q+W +  +  R     G  VN   S L+F
Sbjct: 73  HLLFADDTSSARWIPLAAQIWPIFFLSMRL--FQGNPVNHPMSNLYF 117

The following BLAST results are available for this feature:

BLAST of Lcy05g017370 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P92555	1.0e-13	42.06	Uncharacterized mitochondrial protein AtMg01250 OS=Arabidopsis thaliana OX=3702 ...	[more]
P11369	5.2e-10	31.95	LINE-1 retrotransposable element ORF2 protein OS=Mus musculus OX=10090 GN=Pol PE...	[more]

BLAST of Lcy05g017370 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A2K3JMB0	9.5e-39	48.54	Ribonuclease H OS=Trifolium pratense OX=57577 GN=L195_g048799 PE=4 SV=1	[more]
A0A2K3N033	2.1e-38	47.37	Ribonuclease H (Fragment) OS=Trifolium pratense OX=57577 GN=L195_g019590 PE=4 SV...	[more]
A0A2Z6NRI2	2.8e-38	50.00	Reverse transcriptase domain-containing protein OS=Trifolium subterraneum OX=390...	[more]
A0A2K3NXF2	4.0e-37	46.20	Ribonuclease H OS=Trifolium pratense OX=57577 GN=L195_g004217 PE=4 SV=1	[more]
A0A2K3NX86	4.0e-37	46.20	Ribonuclease H (Fragment) OS=Trifolium pratense OX=57577 GN=L195_g004150 PE=4 SV...	[more]

BLAST of Lcy05g017370 vs. NCBI nr


Match Name	E-value	Identity	Description
PNX55172.1	2.0e-38	48.54	ribonuclease H [Trifolium pratense]	[more]
PNX96384.1	4.4e-38	47.37	ribonuclease H, partial [Trifolium pratense]	[more]
GAU39350.1	5.7e-38	50.00	hypothetical protein TSUD_56760 [Trifolium subterraneum]	[more]
PNY08539.1	8.2e-37	46.20	ribonuclease H [Trifolium pratense]	[more]
PNY07715.1	8.2e-37	46.20	ribonuclease H [Trifolium pratense]	[more]

BLAST of Lcy05g017370 vs. TAIR 10


Match Name	E-value	Identity	Description
ATMG01250.1	7.2e-15	42.06	RNA-directed DNA polymerase (reverse transcriptase)	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000477	Reverse transcriptase domain	PFAM	PF00078	RVT_1	coord: 5..118 e-value: 8.3E-10 score: 38.6
None	No IPR available	PANTHER	PTHR33116:SF45	SUBFAMILY NOT NAMED	coord: 8..170
None	No IPR available	PANTHER	PTHR33116	REVERSE TRANSCRIPTASE ZINC-BINDING DOMAIN-CONTAINING PROTEIN-RELATED-RELATED	coord: 8..170

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy05g017370.1	Lcy05g017370.1	mRNA