Lcy05g017320 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy05g017320
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	Unknown protein
Location	Chr05: 29449470 .. 29449889 (-)
RNA-Seq Expression	Lcy05g017320
Synteny	Lcy05g017320

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAAATCCTAGGGTTCCTCCTCTCCACCACCACTTCCACCGTTTGCTTCTACTTCCATAGTCGCGCCTATCGGCGGAGTGTGTTCTTCGTCTTCGCCGTTCTCCAAGGCACAGCAGCGGCGGTTCTCCAGGCGTACGAAAGAGTTCTGGTGCTCGATTGCTCACTGGCTGGGAAGGAAGGTGCGATTTCGATGTGGTTTTCGTGGATGAGAGCGATCGGCAGTTGCGCTGGATTTACAGTCGCCGCGGTGGTTCCGACGAAGTTACAGGTTTCTGCCGGTGTGGCGTTTTGTAGCGTTGTTGTCGGAGGAGTGGTGTTGATTTATGGTAATGTTACTGATTACGGCAGCCCTGTGGCGGAGGGGCATGTGAGCCTCTTCTATATTTTTTTAAATAAAAAAAAAAGAAAAGAAGAATAA

mRNA sequence

ATGAAAATCCTAGGGTTCCTCCTCTCCACCACCACTTCCACCGTTTGCTTCTACTTCCATAGTCGCGCCTATCGGCGGAGTGTGTTCTTCGTCTTCGCCGTTCTCCAAGGCACAGCAGCGGCGGTTCTCCAGGCGTACGAAAGAGTTCTGGTGCTCGATTGCTCACTGGCTGGGAAGGAAGGTGCGATTTCGATGTGGTTTTCGTGGATGAGAGCGATCGGCAGTTGCGCTGGATTTACAGTCGCCGCGGTGGTTCCGACGAAGTTACAGGTTTCTGCCGGTGTGGCGTTTTGTAGCGTTGTTGTCGGAGGAGTGGTGTTGATTTATGGTAATGTTACTGATTACGGCAGCCCTGTGGCGGAGGGGCATGTGAGCCTCTTCTATATTTTTTTAAATAAAAAAAAAAGAAAAGAAGAATAA

Coding sequence (CDS)

ATGAAAATCCTAGGGTTCCTCCTCTCCACCACCACTTCCACCGTTTGCTTCTACTTCCATAGTCGCGCCTATCGGCGGAGTGTGTTCTTCGTCTTCGCCGTTCTCCAAGGCACAGCAGCGGCGGTTCTCCAGGCGTACGAAAGAGTTCTGGTGCTCGATTGCTCACTGGCTGGGAAGGAAGGTGCGATTTCGATGTGGTTTTCGTGGATGAGAGCGATCGGCAGTTGCGCTGGATTTACAGTCGCCGCGGTGGTTCCGACGAAGTTACAGGTTTCTGCCGGTGTGGCGTTTTGTAGCGTTGTTGTCGGAGGAGTGGTGTTGATTTATGGTAATGTTACTGATTACGGCAGCCCTGTGGCGGAGGGGCATGTGAGCCTCTTCTATATTTTTTTAAATAAAAAAAAAAGAAAAGAAGAATAA

Protein sequence

MKILGFLLSTTTSTVCFYFHSRAYRRSVFFVFAVLQGTAAAVLQAYERVLVLDCSLAGKEGAISMWFSWMRAIGSCAGFTVAAVVPTKLQVSAGVAFCSVVVGGVVLIYGNVTDYGSPVAEGHVSLFYIFLNKKKRKEE

Homology

[Close]

BLAST of Lcy05g017320 vs. ExPASy TrEMBL
Match: A0A6J1E5K6 (uncharacterized protein LOC111430980 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111430980 PE=4 SV=1)

HSP 1 Score: 191.4 bits (485), Expect = 2.5e-45
Identity = 97/124 (78.23%), Postives = 106/124 (85.48%), Query Frame = 0


Query: 1   MKILGFLLSTTTSTVCFYFHSRAYRRSVFFVFAVLQGTAAAVLQAYERVLVLDCSLAGKE 60
           M+ILGF+LS  TS +CFYFH+ A+RR V FVFA LQGTAAA+L +Y RVLVLDCS AGKE
Sbjct: 338 MQILGFILSAVTSAICFYFHNDAWRRPVVFVFASLQGTAAALLHSYGRVLVLDCSPAGKE 397

Query: 61  GAISMWFSWMRAIGSCAGFTVAAVVPTKLQVSAGVAFCSVVVGGVVLIYGNVTDYGSPVA 120
            AISMWFSWMRAIG C GFTVAAVVPT+LQVS+GVAFC  VVGGVVLIYGNVTDYG  VA
Sbjct: 398 AAISMWFSWMRAIGGCVGFTVAAVVPTRLQVSSGVAFCCAVVGGVVLIYGNVTDYGGAVA 457

Query: 121 EGHV 125
            GHV
Sbjct: 458 AGHV 461

[Close]

BLAST of Lcy05g017320 vs. ExPASy TrEMBL
Match: A0A6J1EB57 (uncharacterized protein LOC111430980 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111430980 PE=4 SV=1)

HSP 1 Score: 191.4 bits (485), Expect = 2.5e-45
Identity = 97/124 (78.23%), Postives = 106/124 (85.48%), Query Frame = 0


Query: 1   MKILGFLLSTTTSTVCFYFHSRAYRRSVFFVFAVLQGTAAAVLQAYERVLVLDCSLAGKE 60
           M+ILGF+LS  TS +CFYFH+ A+RR V FVFA LQGTAAA+L +Y RVLVLDCS AGKE
Sbjct: 340 MQILGFILSAVTSAICFYFHNDAWRRPVVFVFASLQGTAAALLHSYGRVLVLDCSPAGKE 399

Query: 61  GAISMWFSWMRAIGSCAGFTVAAVVPTKLQVSAGVAFCSVVVGGVVLIYGNVTDYGSPVA 120
            AISMWFSWMRAIG C GFTVAAVVPT+LQVS+GVAFC  VVGGVVLIYGNVTDYG  VA
Sbjct: 400 AAISMWFSWMRAIGGCVGFTVAAVVPTRLQVSSGVAFCCAVVGGVVLIYGNVTDYGGAVA 459

Query: 121 EGHV 125
            GHV
Sbjct: 460 AGHV 463

[Close]

BLAST of Lcy05g017320 vs. ExPASy TrEMBL
Match: A0A6J1HNK9 (uncharacterized protein LOC111465229 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111465229 PE=4 SV=1)

HSP 1 Score: 185.7 bits (470), Expect = 1.4e-43
Identity = 93/124 (75.00%), Postives = 103/124 (83.06%), Query Frame = 0


Query: 1   MKILGFLLSTTTSTVCFYFHSRAYRRSVFFVFAVLQGTAAAVLQAYERVLVLDCSLAGKE 60
           M+ILGF+LS  TS +CFYFH+ A+R  V FVFA LQGTAAA+L  Y RVLVLDCS AGKE
Sbjct: 408 MQILGFILSAVTSAICFYFHNDAWRLPVVFVFAALQGTAAALLHTYGRVLVLDCSPAGKE 467

Query: 61  GAISMWFSWMRAIGSCAGFTVAAVVPTKLQVSAGVAFCSVVVGGVVLIYGNVTDYGSPVA 120
            AISMWFSWMRAIG C GFTVAAVVP +LQVS+GVAFC  VVGGVVLIYGN+TDYG  V+
Sbjct: 468 AAISMWFSWMRAIGGCVGFTVAAVVPARLQVSSGVAFCCAVVGGVVLIYGNITDYGGAVS 527

Query: 121 EGHV 125
            GHV
Sbjct: 528 AGHV 531

[Close]

BLAST of Lcy05g017320 vs. ExPASy TrEMBL
Match: A0A6J1HK19 (uncharacterized protein LOC111465229 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111465229 PE=4 SV=1)

HSP 1 Score: 185.7 bits (470), Expect = 1.4e-43
Identity = 93/124 (75.00%), Postives = 103/124 (83.06%), Query Frame = 0


Query: 1   MKILGFLLSTTTSTVCFYFHSRAYRRSVFFVFAVLQGTAAAVLQAYERVLVLDCSLAGKE 60
           M+ILGF+LS  TS +CFYFH+ A+R  V FVFA LQGTAAA+L  Y RVLVLDCS AGKE
Sbjct: 410 MQILGFILSAVTSAICFYFHNDAWRLPVVFVFAALQGTAAALLHTYGRVLVLDCSPAGKE 469

Query: 61  GAISMWFSWMRAIGSCAGFTVAAVVPTKLQVSAGVAFCSVVVGGVVLIYGNVTDYGSPVA 120
            AISMWFSWMRAIG C GFTVAAVVP +LQVS+GVAFC  VVGGVVLIYGN+TDYG  V+
Sbjct: 470 AAISMWFSWMRAIGGCVGFTVAAVVPARLQVSSGVAFCCAVVGGVVLIYGNITDYGGAVS 529

Query: 121 EGHV 125
            GHV
Sbjct: 530 AGHV 533

[Close]

BLAST of Lcy05g017320 vs. ExPASy TrEMBL
Match: A0A5D3CJT7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold139G001150 PE=4 SV=1)

HSP 1 Score: 180.6 bits (457), Expect = 4.4e-42
Identity = 92/124 (74.19%), Postives = 100/124 (80.65%), Query Frame = 0


Query: 1   MKILGFLLSTTTSTVCFYFHSRAYRRSVFFVFAVLQGTAAAVLQAYERVLVLDCSLAGKE 60
           M ILGF+LS  TS  CFYFH+  +RR + FVFAVLQGTAAAVL AY R LVLDCS AGKE
Sbjct: 414 MLILGFILSAATSATCFYFHAYTWRRHLVFVFAVLQGTAAAVLHAYGRALVLDCSPAGKE 473

Query: 61  GAISMWFSWMRAIGSCAGFTVAAVVPTKLQVSAGVAFCSVVVGGVVLIYGNVTDYGSPVA 120
            AISMWFSWMR+IG C GFTVAAVVP +LQVS+GV FC  VVGGVVLI+GNVTDY   VA
Sbjct: 474 SAISMWFSWMRSIGGCVGFTVAAVVPARLQVSSGVVFCCAVVGGVVLIFGNVTDYDGAVA 533

Query: 121 EGHV 125
            GHV
Sbjct: 534 AGHV 537

[Close]

BLAST of Lcy05g017320 vs. NCBI nr
Match: KAG6577745.1 (hypothetical protein SDJN03_25319, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 192.2 bits (487), Expect = 3.0e-45
Identity = 97/124 (78.23%), Postives = 106/124 (85.48%), Query Frame = 0


Query: 1   MKILGFLLSTTTSTVCFYFHSRAYRRSVFFVFAVLQGTAAAVLQAYERVLVLDCSLAGKE 60
           M+ILGF+LS  TS +CFYFH+ A+RR V FVFA LQGTAAA+L +Y RVLVLDCS AGKE
Sbjct: 410 MQILGFILSAVTSAICFYFHNDAWRRPVVFVFAALQGTAAALLHSYGRVLVLDCSPAGKE 469

Query: 61  GAISMWFSWMRAIGSCAGFTVAAVVPTKLQVSAGVAFCSVVVGGVVLIYGNVTDYGSPVA 120
            AISMWFSWMRAIG C GFTVAAVVPT+LQVS+GVAFC  VVGGVVLIYGNVTDYG  VA
Sbjct: 470 AAISMWFSWMRAIGGCVGFTVAAVVPTRLQVSSGVAFCCAVVGGVVLIYGNVTDYGGAVA 529

Query: 121 EGHV 125
            GHV
Sbjct: 530 AGHV 533

[Close]

BLAST of Lcy05g017320 vs. NCBI nr
Match: XP_022923220.1 (uncharacterized protein LOC111430980 isoform X1 [Cucurbita moschata])

HSP 1 Score: 191.4 bits (485), Expect = 5.1e-45
Identity = 97/124 (78.23%), Postives = 106/124 (85.48%), Query Frame = 0


Query: 1   MKILGFLLSTTTSTVCFYFHSRAYRRSVFFVFAVLQGTAAAVLQAYERVLVLDCSLAGKE 60
           M+ILGF+LS  TS +CFYFH+ A+RR V FVFA LQGTAAA+L +Y RVLVLDCS AGKE
Sbjct: 340 MQILGFILSAVTSAICFYFHNDAWRRPVVFVFASLQGTAAALLHSYGRVLVLDCSPAGKE 399

Query: 61  GAISMWFSWMRAIGSCAGFTVAAVVPTKLQVSAGVAFCSVVVGGVVLIYGNVTDYGSPVA 120
            AISMWFSWMRAIG C GFTVAAVVPT+LQVS+GVAFC  VVGGVVLIYGNVTDYG  VA
Sbjct: 400 AAISMWFSWMRAIGGCVGFTVAAVVPTRLQVSSGVAFCCAVVGGVVLIYGNVTDYGGAVA 459

Query: 121 EGHV 125
            GHV
Sbjct: 460 AGHV 463

[Close]

BLAST of Lcy05g017320 vs. NCBI nr
Match: KAG7015784.1 (hypothetical protein SDJN02_23422, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 191.4 bits (485), Expect = 5.1e-45
Identity = 97/124 (78.23%), Postives = 106/124 (85.48%), Query Frame = 0


Query: 1   MKILGFLLSTTTSTVCFYFHSRAYRRSVFFVFAVLQGTAAAVLQAYERVLVLDCSLAGKE 60
           M+ILGF+LS  TS +CFYFH+ A+RR V FVFA LQGTAAA+L +Y RVLVLDCS AGKE
Sbjct: 410 MQILGFILSAVTSAICFYFHNDAWRRPVVFVFASLQGTAAALLHSYGRVLVLDCSPAGKE 469

Query: 61  GAISMWFSWMRAIGSCAGFTVAAVVPTKLQVSAGVAFCSVVVGGVVLIYGNVTDYGSPVA 120
            AISMWFSWMRAIG C GFTVAAVVPT+LQVS+GVAFC  VVGGVVLIYGNVTDYG  VA
Sbjct: 470 AAISMWFSWMRAIGGCVGFTVAAVVPTRLQVSSGVAFCCAVVGGVVLIYGNVTDYGGAVA 529

Query: 121 EGHV 125
            GHV
Sbjct: 530 AGHV 533

[Close]

BLAST of Lcy05g017320 vs. NCBI nr
Match: XP_022923222.1 (uncharacterized protein LOC111430980 isoform X2 [Cucurbita moschata])

HSP 1 Score: 191.4 bits (485), Expect = 5.1e-45
Identity = 97/124 (78.23%), Postives = 106/124 (85.48%), Query Frame = 0


Query: 1   MKILGFLLSTTTSTVCFYFHSRAYRRSVFFVFAVLQGTAAAVLQAYERVLVLDCSLAGKE 60
           M+ILGF+LS  TS +CFYFH+ A+RR V FVFA LQGTAAA+L +Y RVLVLDCS AGKE
Sbjct: 338 MQILGFILSAVTSAICFYFHNDAWRRPVVFVFASLQGTAAALLHSYGRVLVLDCSPAGKE 397

Query: 61  GAISMWFSWMRAIGSCAGFTVAAVVPTKLQVSAGVAFCSVVVGGVVLIYGNVTDYGSPVA 120
            AISMWFSWMRAIG C GFTVAAVVPT+LQVS+GVAFC  VVGGVVLIYGNVTDYG  VA
Sbjct: 398 AAISMWFSWMRAIGGCVGFTVAAVVPTRLQVSSGVAFCCAVVGGVVLIYGNVTDYGGAVA 457

Query: 121 EGHV 125
            GHV
Sbjct: 458 AGHV 461

[Close]

BLAST of Lcy05g017320 vs. NCBI nr
Match: XP_023553100.1 (uncharacterized protein LOC111810603 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 190.3 bits (482), Expect = 1.1e-44
Identity = 96/124 (77.42%), Postives = 105/124 (84.68%), Query Frame = 0


Query: 1   MKILGFLLSTTTSTVCFYFHSRAYRRSVFFVFAVLQGTAAAVLQAYERVLVLDCSLAGKE 60
           M+ILGF+LS  TS +CFYFH+ A+RR V FVFA LQGTAAA+L +Y RVLVLDCS AGKE
Sbjct: 178 MQILGFILSAVTSAICFYFHNDAWRRPVVFVFAALQGTAAALLHSYGRVLVLDCSPAGKE 237

Query: 61  GAISMWFSWMRAIGSCAGFTVAAVVPTKLQVSAGVAFCSVVVGGVVLIYGNVTDYGSPVA 120
            AISMWFSWMRAIG C GFTVAAVVP +LQVS+GVAFC  VVGGVVLIYGNVTDYG  VA
Sbjct: 238 AAISMWFSWMRAIGGCVGFTVAAVVPARLQVSSGVAFCCAVVGGVVLIYGNVTDYGGAVA 297

Query: 121 EGHV 125
            GHV
Sbjct: 298 AGHV 301

The following BLAST results are available for this feature:

BLAST of Lcy05g017320 vs.


Match Name	E-value	Identity	Description

BLAST of Lcy05g017320 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1E5K6	2.5e-45	78.23	uncharacterized protein LOC111430980 isoform X2 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1EB57	2.5e-45	78.23	uncharacterized protein LOC111430980 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1HNK9	1.4e-43	75.00	uncharacterized protein LOC111465229 isoform X2 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1HK19	1.4e-43	75.00	uncharacterized protein LOC111465229 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A5D3CJT7	4.4e-42	74.19	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]

BLAST of Lcy05g017320 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6577745.1	3.0e-45	78.23	hypothetical protein SDJN03_25319, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022923220.1	5.1e-45	78.23	uncharacterized protein LOC111430980 isoform X1 [Cucurbita moschata]	[more]
KAG7015784.1	5.1e-45	78.23	hypothetical protein SDJN02_23422, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_022923222.1	5.1e-45	78.23	uncharacterized protein LOC111430980 isoform X2 [Cucurbita moschata]	[more]
XP_023553100.1	1.1e-44	77.42	uncharacterized protein LOC111810603 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Lcy05g017320 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR37891	OS06G0113900 PROTEIN	coord: 1..125

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy05g017320.1	Lcy05g017320.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane