Lcy05g016730 (gene) Sponge gourd (P93075) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGAAAAATCATAAGTGACATTGCCATTTTCTTTCTAAATACCCTCCCTAGAATTACATCATTTTTGCAATCCCAACCCAACGACCCAGAAACAGGAACTCAGCACCACCGCCGGCCACCTTCGCCGCCACCATCTACGACGGTGGAGATGCTAATGCAGTGGGAAAAAATGATGGTAACATTTTGTTTGGCGTCGGCCATTGCCATAGCCACCGTCTTTGTCCAAATAGAAACCAAGTTGTCTCTAATGTTTCGATTCCTTTCGGTTGCGTTAATGGTCTGCTTCAGCTTCACGGCGTCTGCAAAACTCATTAAGCACCAAAGGGTCTCTGAAATTCTGTATTGTTTTGGTGGGTTTGG ATGAGAAAAATCATAAGTGACATTGCCATTTTCTTTCTAAATACCCTCCCTAGAATTACATCATTTTTGCAATCCCAACCCAACGACCCAGAAACAGGAACTCAGCACCACCGCCGGCCACCTTCGCCGCCACCATCTACGACGGTGGAGATGCTAATGCAGTGGGAAAAAATGATGGTAACATTTTGTTTGGCGTCGGCCATTGCCATAGCCACCGTCTTTGTCCAAATAGAAACCAAGTTGTCTCTAATGTTTCGATTCCTTTCGGTTGCGTTAATGGTCTGCTTCAGCTTCACGGCGTCTGCAAAACTCATTAAGCACCAAAGGGTCTCTGAAATTCTGTATTGTTTTGGTGGGTTTGG ATGAGAAAAATCATAAGTGACATTGCCATTTTCTTTCTAAATACCCTCCCTAGAATTACATCATTTTTGCAATCCCAACCCAACGACCCAGAAACAGGAACTCAGCACCACCGCCGGCCACCTTCGCCGCCACCATCTACGACGGTGGAGATGCTAATGCAGTGGGAAAAAATGATGGTAACATTTTGTTTGGCGTCGGCCATTGCCATAGCCACCGTCTTTGTCCAAATAGAAACCAAGTTGTCTCTAATGTTTCGATTCCTTTCGGTTGCGTTAATGGTCTGCTTCAGCTTCACGGCGTCTGCAAAACTCATTAAGCACCAAAGGGTCTCTGAAATTCTGTATTGTTTTGGTGGGTTTGG MRKIISDIAIFFLNTLPRITSFLQSQPNDPETGTQHHRRPPSPPPSTTVEMLMQWEKMMVTFCLASAIAIATVFVQIETKLSLMFRFLSVALMVCFSFTASAKLIKHQRVSEILYCFGGF Homology
BLAST of Lcy05g016730 vs. ExPASy TrEMBL
Match: A0A0A0LQB6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G041520 PE=4 SV=1) HSP 1 Score: 69.3 bits (168), Expect = 1.2e-08 Identity = 38/75 (50.67%), Postives = 54/75 (72.00%), Query Frame = 0
BLAST of Lcy05g016730 vs. ExPASy TrEMBL
Match: A0A0A0LCY2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G851175 PE=4 SV=1) HSP 1 Score: 67.8 bits (164), Expect = 3.6e-08 Identity = 36/73 (49.32%), Postives = 54/73 (73.97%), Query Frame = 0
BLAST of Lcy05g016730 vs. ExPASy TrEMBL
Match: A0A0A0LSX4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G040520 PE=4 SV=1) HSP 1 Score: 62.4 bits (150), Expect = 1.5e-06 Identity = 32/72 (44.44%), Postives = 51/72 (70.83%), Query Frame = 0
BLAST of Lcy05g016730 vs. NCBI nr
Match: KAG6584385.1 (hypothetical protein SDJN03_20317, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 107.8 bits (268), Expect = 6.4e-20 Identity = 58/76 (76.32%), Postives = 63/76 (82.89%), Query Frame = 0
BLAST of Lcy05g016730 vs. NCBI nr
Match: KAG6572911.1 (hypothetical protein SDJN03_26798, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 77.8 bits (190), Expect = 7.1e-11 Identity = 43/81 (53.09%), Postives = 55/81 (67.90%), Query Frame = 0
BLAST of Lcy05g016730 vs. NCBI nr
Match: KAE8652531.1 (hypothetical protein Csa_013077, partial [Cucumis sativus]) HSP 1 Score: 62.4 bits (150), Expect = 3.1e-06 Identity = 32/72 (44.44%), Postives = 51/72 (70.83%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
Relationships
The following mRNA feature(s) are a part of this gene:
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