Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCATCGACATCATCACGCATACACGACGAGACTGATGGAGAGTATGTTGAGGTGCCGGCACCCCCTGCCCCGAACTTACCATCTTCCACGGGGGATACGTCAGGTACATCGTGTTCGGACAATTTTCATCAAATTTTCTTGTTACTTAAACGAATTTATGTGGTTTCCTGTTTGCACTCAGATGGTACATCCATGACTGGGAGGAACAAGCGTGGATATGGACGGAATCTTCTCTTGGACAACTACGTCATGAAACATGGCAAAATTCCAATTACAATCGATCCAGAGGTGAAAAAACCAGTTGGGAAATGGGCGACGCAATTTAGCATATCTATTGGTACGGGCGTTCGGGAGTCTTTTTCTGTTCGATTTGACACTTGGGATGACGTAACTGAAGAGGCTAAGAAGCTGGTAAAGTCTCGACTACTGGTGAGTAGAACATCTTCTCGTGTTGTTACATTATGTGCTACATCAAAGTTCCATACTCAGATATCTATTATTTTTTTGTAGGACCATTTTCTGCTGGACCTGAATTTACCTGCAGTTGTGCGCTTTATAGATCACAGAATGATGAACGCATATAGGGAGTACAGAGGGGAATTATCTAAACATTACAAATCTTTCGACACTCACAAACAGGCACGGGAGCATCCACCTAACCGACTGAAAAATTCATTGGATGATTGGCATTATCTTTGCAACAAGTTCCAGGACCCGAATTGGAAGGTATAAGAGTATATTCTTGTTGTTGGTTTCGATTTGCTTTGCAAAGTTTAGATCCTTATGTTTGTTAACTTATGCAGAAATCTTCAGAATCGAATAAAAGGAGTCGATCCATGTTGGCGTTCAACCATAAGGCAGGGTCAAAATCATTTATAAACATTCAACACGAAATGGTAAGATATGAATAAACTAATTAAGTTATCTCTACGATTATCAATAAGTGATTTCTTAAAATTTTACTTGTATTTGAATTGCAGAAAGAGAAGGAGGGTCGAGACATAGATCCGATTGAACTGTTTGAACTGACCCATTCGAAAAATGGAAAGTGGGTGAACCAGGCAGCGGAAGATGCACATGTAAGAATCTAAACTTTAGTTACTTTGTGTAGTTTTAAAGAACTTAATCGTATATTTTATAAATGTAGGGGAAGATAGTAGAGCTACGGGATGCTCCTATTCCAGAAGGGTCTCAACCACTCAGTAAACCTCTCATATGTGAGACGGTTTTGGGTAAACGGCCCGGCCACGTTAAAGGCATGGGTTGGGGACCTAAGCCATCTCGTTCAAACACGAGTGGCAGCACATCAGTTAGTTCAGGACCCACGCAGAGAGAACTTGAACAACAAGAAGAGATTAACACCTTGAAGGCCCAGTACGAAAATATACAGAAGAAGCTCCAGACCAGCAAGCAGTCTGTGCAGAAGACGATAGAGGAAGTAAATGTCCTGAAAGACATGGTTCGACATCTCGTGGAATCACATCATTTAATCGACTCACAACATATGGACACCCCAAACTTAGGTACGAAAAAGTTCATATTTCCTTGTAGTGCCAATTTACTTATTCGTATCCTAATTTATCATATCTTCATGGTTTAAGTTTTAGATGCTATATATGTCCATTTAGAAGTTCAGAGTTTAATATTTGTTTAATTAGTAAATCATACTAATTTTTGTTGCTTTGATCGTTTTAGTTCATTATGTTCATATGGATTGTGTAACTTTGGAAGTTAGTTTAAAGTTTTGATTGTTTTTGTTTTTTTTGTTAGGTTTCAATGAGTTTAATTGTGAACATGATATAACTTCTAAGTTTAAGGTTGGATTGTTTTAGTTCTTTATAAGTTAGATGATTTAGTTGGTACATATATACTTCATTAGTATTAGATGTCTATAAGTTAAATTTTTGGTAAATGTACATTGTTGTGTTTTTGGTTTAGGAAAAGTTAGTTACCGTTTTGTAATTTTGTTTTACTTAATAAAGTTAGATCAACTTGATTGTTTTTCTTAAATTTGGTGTTTTGCTTGTATTGTTTTGTAATTTCATTAGTTACATCTTAACTTCATTAGTTATGATTTGGATTACTGTGTTATGTGAAATCTGACTCGCTTGTATTTGGAGATTGTGGTGTTGCCCAGGTGTTATGAGGGCTGTAGTTGGGTGTTTTTAGCTATATTGAAATGCATTTCTCTTGTTTAGCAGGTCTAAAAAAATTTGGGTTACTCTTATCTATGCTGTTATGCTGCCGATTTTTTCAGAGCATCTAATTAATAATTTATATGGTTTAAATTAGTTTAAAACTTAGTGTAAAACTTAGTTTCAAGTTAAGAATTTCGCTTCTAGCATCTAATTGATTTTCTTCCTTTGATTTTTTGTAGATGATTCGACTCAATCTTAA
mRNA sequence
ATGGCATCGACATCATCACGCATACACGACGAGACTGATGGAGAGTATGTTGAGGTGCCGGCACCCCCTGCCCCGAACTTACCATCTTCCACGGGGGATACGTCAGATGGTACATCCATGACTGGGAGGAACAAGCGTGGATATGGACGGAATCTTCTCTTGGACAACTACGTCATGAAACATGGCAAAATTCCAATTACAATCGATCCAGAGGTGAAAAAACCAGTTGGGAAATGGGCGACGCAATTTAGCATATCTATTGGTACGGGCGTTCGGGAGTCTTTTTCTGTTCGATTTGACACTTGGGATGACGTAACTGAAGAGGCTAAGAAGCTGGTAAAGTCTCGACTACTGGACCATTTTCTGCTGGACCTGAATTTACCTGCAGTTGTGCGCTTTATAGATCACAGAATGATGAACGCATATAGGGAGTACAGAGGGGAATTATCTAAACATTACAAATCTTTCGACACTCACAAACAGGCACGGGAGCATCCACCTAACCGACTGAAAAATTCATTGGATGATTGGCATTATCTTTGCAACAAGTTCCAGGACCCGAATTGGAAGAAATCTTCAGAATCGAATAAAAGGAGTCGATCCATGTTGGCGTTCAACCATAAGGCAGGGTCAAAATCATTTATAAACATTCAACACGAAATGAAAGAGAAGGAGGGTCGAGACATAGATCCGATTGAACTGTTTGAACTGACCCATTCGAAAAATGGAAAGTGGGTGAACCAGGCAGCGGAAGATGCACATGGGAAGATAGTAGAGCTACGGGATGCTCCTATTCCAGAAGGGTCTCAACCACTCAGTAAACCTCTCATATGTGAGACGGTTTTGGGTAAACGGCCCGGCCACGTTAAAGGCATGGGTTGGGGACCTAAGCCATCTCGTTCAAACACGAGTGGCAGCACATCAGTTAGTTCAGGACCCACGCAGAGAGAACTTGAACAACAAGAAGAGATTAACACCTTGAAGGCCCAGTACGAAAATATACAGAAGAAGCTCCAGACCAGCAAGCAGTCTGTGCAGAAGACGATAGAGGAAGTAAATGTCCTGAAAGACATGGTTCGACATCTCGTGGAATCACATCATTTAATCGACTCACAACATATGGACACCCCAAACTTAGATGATTCGACTCAATCTTAA
Coding sequence (CDS)
ATGGCATCGACATCATCACGCATACACGACGAGACTGATGGAGAGTATGTTGAGGTGCCGGCACCCCCTGCCCCGAACTTACCATCTTCCACGGGGGATACGTCAGATGGTACATCCATGACTGGGAGGAACAAGCGTGGATATGGACGGAATCTTCTCTTGGACAACTACGTCATGAAACATGGCAAAATTCCAATTACAATCGATCCAGAGGTGAAAAAACCAGTTGGGAAATGGGCGACGCAATTTAGCATATCTATTGGTACGGGCGTTCGGGAGTCTTTTTCTGTTCGATTTGACACTTGGGATGACGTAACTGAAGAGGCTAAGAAGCTGGTAAAGTCTCGACTACTGGACCATTTTCTGCTGGACCTGAATTTACCTGCAGTTGTGCGCTTTATAGATCACAGAATGATGAACGCATATAGGGAGTACAGAGGGGAATTATCTAAACATTACAAATCTTTCGACACTCACAAACAGGCACGGGAGCATCCACCTAACCGACTGAAAAATTCATTGGATGATTGGCATTATCTTTGCAACAAGTTCCAGGACCCGAATTGGAAGAAATCTTCAGAATCGAATAAAAGGAGTCGATCCATGTTGGCGTTCAACCATAAGGCAGGGTCAAAATCATTTATAAACATTCAACACGAAATGAAAGAGAAGGAGGGTCGAGACATAGATCCGATTGAACTGTTTGAACTGACCCATTCGAAAAATGGAAAGTGGGTGAACCAGGCAGCGGAAGATGCACATGGGAAGATAGTAGAGCTACGGGATGCTCCTATTCCAGAAGGGTCTCAACCACTCAGTAAACCTCTCATATGTGAGACGGTTTTGGGTAAACGGCCCGGCCACGTTAAAGGCATGGGTTGGGGACCTAAGCCATCTCGTTCAAACACGAGTGGCAGCACATCAGTTAGTTCAGGACCCACGCAGAGAGAACTTGAACAACAAGAAGAGATTAACACCTTGAAGGCCCAGTACGAAAATATACAGAAGAAGCTCCAGACCAGCAAGCAGTCTGTGCAGAAGACGATAGAGGAAGTAAATGTCCTGAAAGACATGGTTCGACATCTCGTGGAATCACATCATTTAATCGACTCACAACATATGGACACCCCAAACTTAGATGATTCGACTCAATCTTAA
Protein sequence
MASTSSRIHDETDGEYVEVPAPPAPNLPSSTGDTSDGTSMTGRNKRGYGRNLLLDNYVMKHGKIPITIDPEVKKPVGKWATQFSISIGTGVRESFSVRFDTWDDVTEEAKKLVKSRLLDHFLLDLNLPAVVRFIDHRMMNAYREYRGELSKHYKSFDTHKQAREHPPNRLKNSLDDWHYLCNKFQDPNWKKSSESNKRSRSMLAFNHKAGSKSFINIQHEMKEKEGRDIDPIELFELTHSKNGKWVNQAAEDAHGKIVELRDAPIPEGSQPLSKPLICETVLGKRPGHVKGMGWGPKPSRSNTSGSTSVSSGPTQRELEQQEEINTLKAQYENIQKKLQTSKQSVQKTIEEVNVLKDMVRHLVESHHLIDSQHMDTPNLDDSTQS
Homology
BLAST of Lcy05g016670 vs. ExPASy TrEMBL
Match:
A0A5D3BCX5 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold37G00660 PE=4 SV=1)
HSP 1 Score: 251.9 bits (642), Expect = 4.3e-63
Identity = 134/340 (39.41%), Postives = 213/340 (62.65%), Query Frame = 0
Query: 29 SSTGDTSDGTSMTGRNKRGYGRNLLLDNYVMKHGKIPITIDPEVKKPVGKWATQFSISIG 88
++ G +S T+ T R +R R L L+ +V +G+IP+TI P +KP+ A +FS +IG
Sbjct: 28 NTAGSSSQQTTPTPR-RRAQSRLLELERHVAINGRIPMTIAPGAEKPISPHAVRFSQAIG 87
Query: 89 TGVRESFSVRFDTWDDVTEEAKKLVKSRLLDHFLLDLNLPAVVRFIDHRMMNAYREYRGE 148
VR++F VR W DV E ++VK L F+LD N A+ RF++H+M+ ++E+R +
Sbjct: 88 VCVRKTFPVRCLKWTDVGREYIEVVKGDLQRFFVLDFNDQAMNRFVEHQMLTTFKEFRAD 147
Query: 149 LSKHYKSFDTHKQAREHPPNRLKNSLDDWHYLCNKFQDPNWKKSSESNKRSRSMLAFNHK 208
KH+K + ++AR +PPN L +DWH+LC+ + +++ S +NK +R +NH
Sbjct: 148 CHKHFKKYSDPEEARANPPNALVGRDEDWHFLCDHYISRAFQEQSRTNKAARQKQPYNHS 207
Query: 209 AGSKSFINIQHEMKEKEGRDIDPIELFELTHSKNGKWVNQAAEDAHGKIVELRDAPIPEG 268
+GSKSF+ QHE+ E+ G+ +D +ELF TH + G +V+QAAEDAH +++EL+ PIPEG
Sbjct: 208 SGSKSFLQRQHELAERRGQPVDRVELFRETHVRAGTFVSQAAEDAHNQMLELQSQPIPEG 267
Query: 269 SQPLSKPLICETVLGKRPGHVKGMGWGPKPSRSNTSGSTSVS---SGPTQRELEQQEEIN 328
SQPLS+ IC+ VLG+RPG+ KG+GWGPKP T+ ++S S S TQ+E+E
Sbjct: 268 SQPLSEDEICDQVLGRRPGYSKGLGWGPKPKARRTASASSSSTSCSQSTQKEIE------ 327
Query: 329 TLKAQYENIQKKLQTSKQSVQKTIEEVNVLKDMVRHLVES 366
L+A+ ++++ ++ Q +V +K M+ L +
Sbjct: 328 -LQAKLHEALERIEVQDRNHQALASQVEAMKKMIEDLTRA 359
BLAST of Lcy05g016670 vs. ExPASy TrEMBL
Match:
A0A5D3C6Z8 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold123G00370 PE=4 SV=1)
HSP 1 Score: 251.1 bits (640), Expect = 7.3e-63
Identity = 134/343 (39.07%), Postives = 212/343 (61.81%), Query Frame = 0
Query: 29 SSTGDTSDGTSMTGR---NKRGYGRNLLLDNYVMKHGKIPITIDPEVKKPVGKWATQFSI 88
SS GD ++ +S +R R L L+ +V +G+IP+TI P +KP+ A +FS
Sbjct: 23 SSVGDNTESSSQQTTPTPRRRAQSRLLELERHVAINGRIPMTIAPGAEKPISPHAVRFSQ 82
Query: 89 SIGTGVRESFSVRFDTWDDVTEEAKKLVKSRLLDHFLLDLNLPAVVRFIDHRMMNAYREY 148
+IG VR++F VR W DV E ++VK L F+LD N A+ RF++H+M+ ++E+
Sbjct: 83 AIGVCVRKTFPVRCLKWTDVGREYIEVVKGDLQRFFVLDFNDQAMNRFVEHQMLTTFKEF 142
Query: 149 RGELSKHYKSFDTHKQAREHPPNRLKNSLDDWHYLCNKFQDPNWKKSSESNKRSRSMLAF 208
R + KH+K + ++AR +PPN L +DWH+LC+ + +++ S +NK +R +
Sbjct: 143 RADCHKHFKKYSDPEEARANPPNALVGRDEDWHFLCDHYISRAFQEQSRTNKAARQKQPY 202
Query: 209 NHKAGSKSFINIQHEMKEKEGRDIDPIELFELTHSKNGKWVNQAAEDAHGKIVELRDAPI 268
NH +GSKSF+ QHE+ E+ G+ +D +ELF TH + G +V+QAAEDAH +++EL+ PI
Sbjct: 203 NHSSGSKSFLQRQHELAERRGQPVDRVELFRETHVRAGTFVSQAAEDAHNQMLELQSQPI 262
Query: 269 PEGSQPLSKPLICETVLGKRPGHVKGMGWGPKPSRSNTSGSTSVS---SGPTQRELEQQE 328
PEGSQPLS+ IC+ VLG+RPG+ KG+GWGPKP T+ ++S S S TQ+E+E
Sbjct: 263 PEGSQPLSEDEICDQVLGRRPGYSKGLGWGPKPKARRTASASSSSTSCSQSTQKEIE--- 322
Query: 329 EINTLKAQYENIQKKLQTSKQSVQKTIEEVNVLKDMVRHLVES 366
L+A+ ++++ ++ Q +V +K M+ L +
Sbjct: 323 ----LQAKLHEALERIEVQDRNHQALASQVEAMKKMIEDLTRA 358
BLAST of Lcy05g016670 vs. ExPASy TrEMBL
Match:
A0A5D3CLU4 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold106G00810 PE=4 SV=1)
HSP 1 Score: 251.1 bits (640), Expect = 7.3e-63
Identity = 134/339 (39.53%), Postives = 213/339 (62.83%), Query Frame = 0
Query: 30 STGDTSDGTSMTGRNKRGYGRNLLLDNYVMKHGKIPITIDPEVKKPVGKWATQFSISIGT 89
+TG +S T+ T R +R R L L+ +V +G+IP+TI P +KP+ A +FS +IG
Sbjct: 28 NTGSSSQQTTPTPR-RRAQSRLLELERHVAINGRIPMTIAPGAEKPISPHAVRFSQAIGV 87
Query: 90 GVRESFSVRFDTWDDVTEEAKKLVKSRLLDHFLLDLNLPAVVRFIDHRMMNAYREYRGEL 149
VR++F VR W DV E ++VK L F+LD N A+ RF++H+M+ ++E+R +
Sbjct: 88 CVRKTFPVRCLKWTDVGREYIEVVKGDLQRFFVLDFNDQAMNRFVEHQMLTTFKEFRADC 147
Query: 150 SKHYKSFDTHKQAREHPPNRLKNSLDDWHYLCNKFQDPNWKKSSESNKRSRSMLAFNHKA 209
KH+K + ++AR +PPN L +DWH+LC+ + +++ S +NK +R +NH +
Sbjct: 148 HKHFKKYSDPEEARANPPNALVGRDEDWHFLCDHYISRAFQEQSRTNKAARQKQPYNHSS 207
Query: 210 GSKSFINIQHEMKEKEGRDIDPIELFELTHSKNGKWVNQAAEDAHGKIVELRDAPIPEGS 269
GSKSF+ Q+E+ E+ G+ +D +ELF TH + G +V+QAAEDAH +++EL+ PIPEGS
Sbjct: 208 GSKSFLQRQYELAERRGQPVDRVELFRETHVRAGTFVSQAAEDAHNQMLELQSQPIPEGS 267
Query: 270 QPLSKPLICETVLGKRPGHVKGMGWGPKPSRSNTSGSTSVS---SGPTQRELEQQEEINT 329
QPLS+ IC+ VLG+RPG+ KG+GWGPKP T+ ++S S S TQ+E+E
Sbjct: 268 QPLSEDEICDQVLGRRPGYSKGLGWGPKPKARRTASASSSSTSCSQSTQKEIE------- 327
Query: 330 LKAQYENIQKKLQTSKQSVQKTIEEVNVLKDMVRHLVES 366
L+A+ ++++ ++ Q +V +K M+ L +
Sbjct: 328 LQAKLHEALERIEVQDRNHQALASQVEAMKKMIEDLTRA 358
BLAST of Lcy05g016670 vs. ExPASy TrEMBL
Match:
A0A5D3DFY2 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold387G00030 PE=4 SV=1)
HSP 1 Score: 251.1 bits (640), Expect = 7.3e-63
Identity = 134/343 (39.07%), Postives = 212/343 (61.81%), Query Frame = 0
Query: 29 SSTGDTSDGTSMTGR---NKRGYGRNLLLDNYVMKHGKIPITIDPEVKKPVGKWATQFSI 88
SS GD ++ +S +R R L L+ +V +G+IP+TI P +KP+ A +FS
Sbjct: 176 SSVGDNTESSSQQTTPTPRRRAQSRLLELERHVAINGRIPMTIAPGAEKPISPHAVRFSQ 235
Query: 89 SIGTGVRESFSVRFDTWDDVTEEAKKLVKSRLLDHFLLDLNLPAVVRFIDHRMMNAYREY 148
+IG VR++F VR W DV E ++VK L F+LD N A+ RF++H+M+ ++E+
Sbjct: 236 AIGVCVRKTFPVRCLKWTDVGREYIEVVKGDLQRFFVLDFNDQAMNRFVEHQMLTTFKEF 295
Query: 149 RGELSKHYKSFDTHKQAREHPPNRLKNSLDDWHYLCNKFQDPNWKKSSESNKRSRSMLAF 208
R + KH+K + ++AR +PPN L +DWH+LC+ + +++ S +NK +R +
Sbjct: 296 RADCHKHFKKYSDPEEARANPPNALVGRDEDWHFLCDHYISRAFQEQSRTNKAARQKQPY 355
Query: 209 NHKAGSKSFINIQHEMKEKEGRDIDPIELFELTHSKNGKWVNQAAEDAHGKIVELRDAPI 268
NH +GSKSF+ QHE+ E+ G+ +D +ELF TH + G +V+QAAEDAH +++EL+ PI
Sbjct: 356 NHSSGSKSFLQRQHELAERRGQPVDRVELFRETHVRAGTFVSQAAEDAHNQMLELQSQPI 415
Query: 269 PEGSQPLSKPLICETVLGKRPGHVKGMGWGPKPSRSNTSGSTSVS---SGPTQRELEQQE 328
PEGSQPLS+ IC+ VLG+RPG+ KG+GWGPKP T+ ++S S S TQ+E+E
Sbjct: 416 PEGSQPLSEDEICDQVLGRRPGYSKGLGWGPKPKARRTASASSSSTSCSQSTQKEIE--- 475
Query: 329 EINTLKAQYENIQKKLQTSKQSVQKTIEEVNVLKDMVRHLVES 366
L+A+ ++++ ++ Q +V +K M+ L +
Sbjct: 476 ----LQAKLHEALERIEVQDRNHQALASQVEAMKKMIEDLTRA 511
BLAST of Lcy05g016670 vs. ExPASy TrEMBL
Match:
A0A5D3CI90 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G002690 PE=4 SV=1)
HSP 1 Score: 251.1 bits (640), Expect = 7.3e-63
Identity = 134/343 (39.07%), Postives = 212/343 (61.81%), Query Frame = 0
Query: 29 SSTGDTSDGTSMTGR---NKRGYGRNLLLDNYVMKHGKIPITIDPEVKKPVGKWATQFSI 88
SS GD ++ +S +R R L L+ +V +G+IP+TI P +KP+ A +FS
Sbjct: 176 SSVGDNTESSSQQTTPTPRRRAQSRLLELERHVAINGRIPMTIAPGAEKPISPHAVRFSQ 235
Query: 89 SIGTGVRESFSVRFDTWDDVTEEAKKLVKSRLLDHFLLDLNLPAVVRFIDHRMMNAYREY 148
+IG VR++F VR W DV E ++VK L F+LD N A+ RF++H+M+ ++E+
Sbjct: 236 AIGVCVRKTFPVRCLKWTDVGREYIEVVKGDLQRFFVLDFNDQAMNRFVEHQMLTTFKEF 295
Query: 149 RGELSKHYKSFDTHKQAREHPPNRLKNSLDDWHYLCNKFQDPNWKKSSESNKRSRSMLAF 208
R + KH+K + ++AR +PPN L +DWH+LC+ + +++ S +NK +R +
Sbjct: 296 RADCHKHFKKYSDPEEARANPPNALVGRDEDWHFLCDHYISRAFQEQSRTNKAARQKQPY 355
Query: 209 NHKAGSKSFINIQHEMKEKEGRDIDPIELFELTHSKNGKWVNQAAEDAHGKIVELRDAPI 268
NH +GSKSF+ QHE+ E+ G+ +D +ELF TH + G +V+QAAEDAH +++EL+ PI
Sbjct: 356 NHSSGSKSFLQRQHELAERRGQPVDRVELFRETHVRAGTFVSQAAEDAHNQMLELQSQPI 415
Query: 269 PEGSQPLSKPLICETVLGKRPGHVKGMGWGPKPSRSNTSGSTSVS---SGPTQRELEQQE 328
PEGSQPLS+ IC+ VLG+RPG+ KG+GWGPKP T+ ++S S S TQ+E+E
Sbjct: 416 PEGSQPLSEDEICDQVLGRRPGYSKGLGWGPKPKARRTASASSSSTSCSQSTQKEIE--- 475
Query: 329 EINTLKAQYENIQKKLQTSKQSVQKTIEEVNVLKDMVRHLVES 366
L+A+ ++++ ++ Q +V +K M+ L +
Sbjct: 476 ----LQAKLHEALERIEVQDRNHQALASQVEAMKKMIEDLTRA 511
BLAST of Lcy05g016670 vs. NCBI nr
Match:
TYJ97690.1 (CACTA en-spm transposon protein [Cucumis melo var. makuwa])
HSP 1 Score: 251.9 bits (642), Expect = 8.8e-63
Identity = 134/340 (39.41%), Postives = 213/340 (62.65%), Query Frame = 0
Query: 29 SSTGDTSDGTSMTGRNKRGYGRNLLLDNYVMKHGKIPITIDPEVKKPVGKWATQFSISIG 88
++ G +S T+ T R +R R L L+ +V +G+IP+TI P +KP+ A +FS +IG
Sbjct: 28 NTAGSSSQQTTPTPR-RRAQSRLLELERHVAINGRIPMTIAPGAEKPISPHAVRFSQAIG 87
Query: 89 TGVRESFSVRFDTWDDVTEEAKKLVKSRLLDHFLLDLNLPAVVRFIDHRMMNAYREYRGE 148
VR++F VR W DV E ++VK L F+LD N A+ RF++H+M+ ++E+R +
Sbjct: 88 VCVRKTFPVRCLKWTDVGREYIEVVKGDLQRFFVLDFNDQAMNRFVEHQMLTTFKEFRAD 147
Query: 149 LSKHYKSFDTHKQAREHPPNRLKNSLDDWHYLCNKFQDPNWKKSSESNKRSRSMLAFNHK 208
KH+K + ++AR +PPN L +DWH+LC+ + +++ S +NK +R +NH
Sbjct: 148 CHKHFKKYSDPEEARANPPNALVGRDEDWHFLCDHYISRAFQEQSRTNKAARQKQPYNHS 207
Query: 209 AGSKSFINIQHEMKEKEGRDIDPIELFELTHSKNGKWVNQAAEDAHGKIVELRDAPIPEG 268
+GSKSF+ QHE+ E+ G+ +D +ELF TH + G +V+QAAEDAH +++EL+ PIPEG
Sbjct: 208 SGSKSFLQRQHELAERRGQPVDRVELFRETHVRAGTFVSQAAEDAHNQMLELQSQPIPEG 267
Query: 269 SQPLSKPLICETVLGKRPGHVKGMGWGPKPSRSNTSGSTSVS---SGPTQRELEQQEEIN 328
SQPLS+ IC+ VLG+RPG+ KG+GWGPKP T+ ++S S S TQ+E+E
Sbjct: 268 SQPLSEDEICDQVLGRRPGYSKGLGWGPKPKARRTASASSSSTSCSQSTQKEIE------ 327
Query: 329 TLKAQYENIQKKLQTSKQSVQKTIEEVNVLKDMVRHLVES 366
L+A+ ++++ ++ Q +V +K M+ L +
Sbjct: 328 -LQAKLHEALERIEVQDRNHQALASQVEAMKKMIEDLTRA 359
BLAST of Lcy05g016670 vs. NCBI nr
Match:
TYK22506.1 (CACTA en-spm transposon protein [Cucumis melo var. makuwa])
HSP 1 Score: 251.1 bits (640), Expect = 1.5e-62
Identity = 134/343 (39.07%), Postives = 212/343 (61.81%), Query Frame = 0
Query: 29 SSTGDTSDGTSMTGR---NKRGYGRNLLLDNYVMKHGKIPITIDPEVKKPVGKWATQFSI 88
SS GD ++ +S +R R L L+ +V +G+IP+TI P +KP+ A +FS
Sbjct: 176 SSVGDNTESSSQQTTPTPRRRAQSRLLELERHVAINGRIPMTIAPGAEKPISPHAVRFSQ 235
Query: 89 SIGTGVRESFSVRFDTWDDVTEEAKKLVKSRLLDHFLLDLNLPAVVRFIDHRMMNAYREY 148
+IG VR++F VR W DV E ++VK L F+LD N A+ RF++H+M+ ++E+
Sbjct: 236 AIGVCVRKTFPVRCLKWTDVGREYIEVVKGDLQRFFVLDFNDQAMNRFVEHQMLTTFKEF 295
Query: 149 RGELSKHYKSFDTHKQAREHPPNRLKNSLDDWHYLCNKFQDPNWKKSSESNKRSRSMLAF 208
R + KH+K + ++AR +PPN L +DWH+LC+ + +++ S +NK +R +
Sbjct: 296 RADCHKHFKKYSDPEEARANPPNALVGRDEDWHFLCDHYISRAFQEQSRTNKAARQKQPY 355
Query: 209 NHKAGSKSFINIQHEMKEKEGRDIDPIELFELTHSKNGKWVNQAAEDAHGKIVELRDAPI 268
NH +GSKSF+ QHE+ E+ G+ +D +ELF TH + G +V+QAAEDAH +++EL+ PI
Sbjct: 356 NHSSGSKSFLQRQHELAERRGQPVDRVELFRETHVRAGTFVSQAAEDAHNQMLELQSQPI 415
Query: 269 PEGSQPLSKPLICETVLGKRPGHVKGMGWGPKPSRSNTSGSTSVS---SGPTQRELEQQE 328
PEGSQPLS+ IC+ VLG+RPG+ KG+GWGPKP T+ ++S S S TQ+E+E
Sbjct: 416 PEGSQPLSEDEICDQVLGRRPGYSKGLGWGPKPKARRTASASSSSTSCSQSTQKEIE--- 475
Query: 329 EINTLKAQYENIQKKLQTSKQSVQKTIEEVNVLKDMVRHLVES 366
L+A+ ++++ ++ Q +V +K M+ L +
Sbjct: 476 ----LQAKLHEALERIEVQDRNHQALASQVEAMKKMIEDLTRA 511
BLAST of Lcy05g016670 vs. NCBI nr
Match:
TYJ99472.1 (CACTA en-spm transposon protein [Cucumis melo var. makuwa] >TYK07110.1 CACTA en-spm transposon protein [Cucumis melo var. makuwa])
HSP 1 Score: 251.1 bits (640), Expect = 1.5e-62
Identity = 134/343 (39.07%), Postives = 212/343 (61.81%), Query Frame = 0
Query: 29 SSTGDTSDGTSMTGR---NKRGYGRNLLLDNYVMKHGKIPITIDPEVKKPVGKWATQFSI 88
SS GD ++ +S +R R L L+ +V +G+IP+TI P +KP+ A +FS
Sbjct: 23 SSVGDNTESSSQQTTPTPRRRAQSRLLELERHVAINGRIPMTIAPGAEKPISPHAVRFSQ 82
Query: 89 SIGTGVRESFSVRFDTWDDVTEEAKKLVKSRLLDHFLLDLNLPAVVRFIDHRMMNAYREY 148
+IG VR++F VR W DV E ++VK L F+LD N A+ RF++H+M+ ++E+
Sbjct: 83 AIGVCVRKTFPVRCLKWTDVGREYIEVVKGDLQRFFVLDFNDQAMNRFVEHQMLTTFKEF 142
Query: 149 RGELSKHYKSFDTHKQAREHPPNRLKNSLDDWHYLCNKFQDPNWKKSSESNKRSRSMLAF 208
R + KH+K + ++AR +PPN L +DWH+LC+ + +++ S +NK +R +
Sbjct: 143 RADCHKHFKKYSDPEEARANPPNALVGRDEDWHFLCDHYISRAFQEQSRTNKAARQKQPY 202
Query: 209 NHKAGSKSFINIQHEMKEKEGRDIDPIELFELTHSKNGKWVNQAAEDAHGKIVELRDAPI 268
NH +GSKSF+ QHE+ E+ G+ +D +ELF TH + G +V+QAAEDAH +++EL+ PI
Sbjct: 203 NHSSGSKSFLQRQHELAERRGQPVDRVELFRETHVRAGTFVSQAAEDAHNQMLELQSQPI 262
Query: 269 PEGSQPLSKPLICETVLGKRPGHVKGMGWGPKPSRSNTSGSTSVS---SGPTQRELEQQE 328
PEGSQPLS+ IC+ VLG+RPG+ KG+GWGPKP T+ ++S S S TQ+E+E
Sbjct: 263 PEGSQPLSEDEICDQVLGRRPGYSKGLGWGPKPKARRTASASSSSTSCSQSTQKEIE--- 322
Query: 329 EINTLKAQYENIQKKLQTSKQSVQKTIEEVNVLKDMVRHLVES 366
L+A+ ++++ ++ Q +V +K M+ L +
Sbjct: 323 ----LQAKLHEALERIEVQDRNHQALASQVEAMKKMIEDLTRA 358
BLAST of Lcy05g016670 vs. NCBI nr
Match:
TYK10126.1 (CACTA en-spm transposon protein [Cucumis melo var. makuwa])
HSP 1 Score: 251.1 bits (640), Expect = 1.5e-62
Identity = 134/343 (39.07%), Postives = 212/343 (61.81%), Query Frame = 0
Query: 29 SSTGDTSDGTSMTGR---NKRGYGRNLLLDNYVMKHGKIPITIDPEVKKPVGKWATQFSI 88
SS GD ++ +S +R R L L+ +V +G+IP+TI P +KP+ A +FS
Sbjct: 176 SSVGDNTESSSQQTTPTPRRRAQSRLLELERHVAINGRIPMTIAPGAEKPISPHAVRFSQ 235
Query: 89 SIGTGVRESFSVRFDTWDDVTEEAKKLVKSRLLDHFLLDLNLPAVVRFIDHRMMNAYREY 148
+IG VR++F VR W DV E ++VK L F+LD N A+ RF++H+M+ ++E+
Sbjct: 236 AIGVCVRKTFPVRCLKWTDVGREYIEVVKGDLQRFFVLDFNDQAMNRFVEHQMLTTFKEF 295
Query: 149 RGELSKHYKSFDTHKQAREHPPNRLKNSLDDWHYLCNKFQDPNWKKSSESNKRSRSMLAF 208
R + KH+K + ++AR +PPN L +DWH+LC+ + +++ S +NK +R +
Sbjct: 296 RADCHKHFKKYSDPEEARANPPNALVGRDEDWHFLCDHYISRAFQEQSRTNKAARQKQPY 355
Query: 209 NHKAGSKSFINIQHEMKEKEGRDIDPIELFELTHSKNGKWVNQAAEDAHGKIVELRDAPI 268
NH +GSKSF+ QHE+ E+ G+ +D +ELF TH + G +V+QAAEDAH +++EL+ PI
Sbjct: 356 NHSSGSKSFLQRQHELAERRGQPVDRVELFRETHVRAGTFVSQAAEDAHNQMLELQSQPI 415
Query: 269 PEGSQPLSKPLICETVLGKRPGHVKGMGWGPKPSRSNTSGSTSVS---SGPTQRELEQQE 328
PEGSQPLS+ IC+ VLG+RPG+ KG+GWGPKP T+ ++S S S TQ+E+E
Sbjct: 416 PEGSQPLSEDEICDQVLGRRPGYSKGLGWGPKPKARRTASASSSSTSCSQSTQKEIE--- 475
Query: 329 EINTLKAQYENIQKKLQTSKQSVQKTIEEVNVLKDMVRHLVES 366
L+A+ ++++ ++ Q +V +K M+ L +
Sbjct: 476 ----LQAKLHEALERIEVQDRNHQALASQVEAMKKMIEDLTRA 511
BLAST of Lcy05g016670 vs. NCBI nr
Match:
TYK12144.1 (CACTA en-spm transposon protein [Cucumis melo var. makuwa])
HSP 1 Score: 251.1 bits (640), Expect = 1.5e-62
Identity = 134/339 (39.53%), Postives = 213/339 (62.83%), Query Frame = 0
Query: 30 STGDTSDGTSMTGRNKRGYGRNLLLDNYVMKHGKIPITIDPEVKKPVGKWATQFSISIGT 89
+TG +S T+ T R +R R L L+ +V +G+IP+TI P +KP+ A +FS +IG
Sbjct: 28 NTGSSSQQTTPTPR-RRAQSRLLELERHVAINGRIPMTIAPGAEKPISPHAVRFSQAIGV 87
Query: 90 GVRESFSVRFDTWDDVTEEAKKLVKSRLLDHFLLDLNLPAVVRFIDHRMMNAYREYRGEL 149
VR++F VR W DV E ++VK L F+LD N A+ RF++H+M+ ++E+R +
Sbjct: 88 CVRKTFPVRCLKWTDVGREYIEVVKGDLQRFFVLDFNDQAMNRFVEHQMLTTFKEFRADC 147
Query: 150 SKHYKSFDTHKQAREHPPNRLKNSLDDWHYLCNKFQDPNWKKSSESNKRSRSMLAFNHKA 209
KH+K + ++AR +PPN L +DWH+LC+ + +++ S +NK +R +NH +
Sbjct: 148 HKHFKKYSDPEEARANPPNALVGRDEDWHFLCDHYISRAFQEQSRTNKAARQKQPYNHSS 207
Query: 210 GSKSFINIQHEMKEKEGRDIDPIELFELTHSKNGKWVNQAAEDAHGKIVELRDAPIPEGS 269
GSKSF+ Q+E+ E+ G+ +D +ELF TH + G +V+QAAEDAH +++EL+ PIPEGS
Sbjct: 208 GSKSFLQRQYELAERRGQPVDRVELFRETHVRAGTFVSQAAEDAHNQMLELQSQPIPEGS 267
Query: 270 QPLSKPLICETVLGKRPGHVKGMGWGPKPSRSNTSGSTSVS---SGPTQRELEQQEEINT 329
QPLS+ IC+ VLG+RPG+ KG+GWGPKP T+ ++S S S TQ+E+E
Sbjct: 268 QPLSEDEICDQVLGRRPGYSKGLGWGPKPKARRTASASSSSTSCSQSTQKEIE------- 327
Query: 330 LKAQYENIQKKLQTSKQSVQKTIEEVNVLKDMVRHLVES 366
L+A+ ++++ ++ Q +V +K M+ L +
Sbjct: 328 LQAKLHEALERIEVQDRNHQALASQVEAMKKMIEDLTRA 358
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A5D3BCX5 | 4.3e-63 | 39.41 | CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_... | [more] |
| A0A5D3C6Z8 | 7.3e-63 | 39.07 | CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_... | [more] |
| A0A5D3CLU4 | 7.3e-63 | 39.53 | CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_... | [more] |
| A0A5D3DFY2 | 7.3e-63 | 39.07 | CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_... | [more] |
| A0A5D3CI90 | 7.3e-63 | 39.07 | CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| TYJ97690.1 | 8.8e-63 | 39.41 | CACTA en-spm transposon protein [Cucumis melo var. makuwa] | [more] |
| TYK22506.1 | 1.5e-62 | 39.07 | CACTA en-spm transposon protein [Cucumis melo var. makuwa] | [more] |
| TYJ99472.1 | 1.5e-62 | 39.07 | CACTA en-spm transposon protein [Cucumis melo var. makuwa] >TYK07110.1 CACTA en-... | [more] |
| TYK10126.1 | 1.5e-62 | 39.07 | CACTA en-spm transposon protein [Cucumis melo var. makuwa] | [more] |
| TYK12144.1 | 1.5e-62 | 39.53 | CACTA en-spm transposon protein [Cucumis melo var. makuwa] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
