Lcy05g016550 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy05g016550
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	AA_kinase domain-containing protein
Location	Chr05: 23335200 .. 23335445 (+)
RNA-Seq Expression	Lcy05g016550
Synteny	Lcy05g016550

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTGGAGGGCTCATCTTCTTCTTTAGTTCGGGGGCACTCCGTTCCTTTTGACTCAGAGACCATAAATCGTTTTTATGACTTACCCAATTTTGATAGGGATGGTTATAACGCCTACGTTAGTGACCACTTAGATGTTAATGAGGTCATTCAGGTATTATGTAGGCCGGACGCAGAGTGGGTTCTAAACGGTAATGAGGTGGTGCGTTTTAGGACTACAGATCTCCACGTAGATCATCAGGCCTAG

mRNA sequence

ATGGTGGAGGGCTCATCTTCTTCTTTAGTTCGGGGGCACTCCGTTCCTTTTGACTCAGAGACCATAAATCGTTTTTATGACTTACCCAATTTTGATAGGGATGGTTATAACGCCTACGTTAGTGACCACTTAGATGTTAATGAGGTCATTCAGGTATTATGTAGGCCGGACGCAGAGTGGGTTCTAAACGGTAATGAGGTGGTGCGTTTTAGGACTACAGATCTCCACGTAGATCATCAGGCCTAG

Coding sequence (CDS)

ATGGTGGAGGGCTCATCTTCTTCTTTAGTTCGGGGGCACTCCGTTCCTTTTGACTCAGAGACCATAAATCGTTTTTATGACTTACCCAATTTTGATAGGGATGGTTATAACGCCTACGTTAGTGACCACTTAGATGTTAATGAGGTCATTCAGGTATTATGTAGGCCGGACGCAGAGTGGGTTCTAAACGGTAATGAGGTGGTGCGTTTTAGGACTACAGATCTCCACGTAGATCATCAGGCCTAG

Protein sequence

MVEGSSSSLVRGHSVPFDSETINRFYDLPNFDRDGYNAYVSDHLDVNEVIQVLCRPDAEWVLNGNEVVRFRTTDLHVDHQA

Homology

[Close]

BLAST of Lcy05g016550 vs. ExPASy TrEMBL
Match: A0A0A0KER1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G149380 PE=4 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 3.0e-19
Identity = 45/80 (56.25%), Postives = 62/80 (77.50%), Query Frame = 0


Query: 1   MVEGSSSSLVRGHSVPFDSETINRFYDLPNFDRDGYNAYVSDHLDVNEVIQVLCRPDAEW 60
           MVEGSS S VRG  V FD  TINR+Y LPNF+RD Y+ Y S+H+DV+++I+ LC+P AEW
Sbjct: 89  MVEGSSRSFVRGRQVSFDYGTINRYYHLPNFERDEYDIYASEHVDVHQIIRELCQPGAEW 148

Query: 61  VLNGNEVVRFRTTDLHVDHQ 81
           V+N  E +RF++++L V +Q
Sbjct: 149 VINPGEPIRFKSSNLTVSNQ 168

[Close]

BLAST of Lcy05g016550 vs. ExPASy TrEMBL
Match: A0A5D3BBY3 (Putative S-locus lectin protein kinase family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold26G00020 PE=4 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 8.8e-19
Identity = 44/80 (55.00%), Postives = 61/80 (76.25%), Query Frame = 0


Query: 1   MVEGSSSSLVRGHSVPFDSETINRFYDLPNFDRDGYNAYVSDHLDVNEVIQVLCRPDAEW 60
           MVEGSS S VRG  V FD  TINR+Y LPNF+RD Y  Y S+H+DV+++I+ LC+P AEW
Sbjct: 89  MVEGSSRSFVRGRQVSFDYGTINRYYHLPNFERDEYAIYASEHVDVHQIIRELCQPGAEW 148

Query: 61  VLNGNEVVRFRTTDLHVDHQ 81
           ++N  E +RF++++L V +Q
Sbjct: 149 IINPGEPIRFKSSNLTVSNQ 168

[Close]

BLAST of Lcy05g016550 vs. ExPASy TrEMBL
Match: A0A1S3C7Y0 (uncharacterized protein LOC103497996 OS=Cucumis melo OX=3656 GN=LOC103497996 PE=4 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 8.8e-19
Identity = 44/80 (55.00%), Postives = 61/80 (76.25%), Query Frame = 0


Query: 1   MVEGSSSSLVRGHSVPFDSETINRFYDLPNFDRDGYNAYVSDHLDVNEVIQVLCRPDAEW 60
           MVEGSS S VRG  V FD  TINR+Y LPNF+RD Y  Y S+H+DV+++I+ LC+P AEW
Sbjct: 27  MVEGSSRSFVRGRQVSFDYGTINRYYHLPNFERDEYAIYASEHVDVHQIIRELCQPGAEW 86

Query: 61  VLNGNEVVRFRTTDLHVDHQ 81
           ++N  E +RF++++L V +Q
Sbjct: 87  IINPGEPIRFKSSNLTVSNQ 106

[Close]

BLAST of Lcy05g016550 vs. ExPASy TrEMBL
Match: A0A0A0KNI1 (AA_kinase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G468460 PE=4 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 1.7e-14
Identity = 38/62 (61.29%), Postives = 49/62 (79.03%), Query Frame = 0


Query: 1   MVEGSSSSLVRGHSVPFDSETINRFYDLPNFDRDGYNAYVSDHLDVNEVIQVLCRPDAEW 60
           MVEGSS S VRG  V FD  TINR+Y LPNF+RD Y+ Y S+H+DV+++I+ LC+P AEW
Sbjct: 89  MVEGSSRSFVRGRQVSFDYGTINRYYHLPNFERDEYDIYASEHVDVHQIIRELCQPGAEW 148

Query: 61  VL 63
           +L
Sbjct: 149 LL 150

[Close]

BLAST of Lcy05g016550 vs. ExPASy TrEMBL
Match: A0A061FAJ6 (Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_032752 PE=4 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 1.0e-06
Identity = 27/64 (42.19%), Postives = 35/64 (54.69%), Query Frame = 0


Query: 8   SLVRGHSVPFDSETINRFYDLPNFDRDGYNAYVSDHLDVNEVIQVLCRPDAEWVLNGNEV 67
           + VRG  VPF S+ IN     PN + D Y  Y+ DH D NE+I  LC   A+W  +  E 
Sbjct: 92  AFVRGKHVPFHSQAINELLRTPNIENDEYGQYLGDHQDCNEIISTLCIEGAQWKTSHGEP 151

Query: 68  VRFR 72
           V F+
Sbjct: 152 VSFK 155

[Close]

BLAST of Lcy05g016550 vs. NCBI nr
Match: KGN46897.1 (hypothetical protein Csa_020731 [Cucumis sativus])

HSP 1 Score: 104.0 bits (258), Expect = 6.3e-19
Identity = 45/80 (56.25%), Postives = 62/80 (77.50%), Query Frame = 0


Query: 1   MVEGSSSSLVRGHSVPFDSETINRFYDLPNFDRDGYNAYVSDHLDVNEVIQVLCRPDAEW 60
           MVEGSS S VRG  V FD  TINR+Y LPNF+RD Y+ Y S+H+DV+++I+ LC+P AEW
Sbjct: 89  MVEGSSRSFVRGRQVSFDYGTINRYYHLPNFERDEYDIYASEHVDVHQIIRELCQPGAEW 148

Query: 61  VLNGNEVVRFRTTDLHVDHQ 81
           V+N  E +RF++++L V +Q
Sbjct: 149 VINPGEPIRFKSSNLTVSNQ 168

[Close]

BLAST of Lcy05g016550 vs. NCBI nr
Match: KAA0033353.1 (putative S-locus lectin protein kinase family protein [Cucumis melo var. makuwa] >TYJ96637.1 putative S-locus lectin protein kinase family protein [Cucumis melo var. makuwa])

HSP 1 Score: 102.4 bits (254), Expect = 1.8e-18
Identity = 44/80 (55.00%), Postives = 61/80 (76.25%), Query Frame = 0


Query: 1   MVEGSSSSLVRGHSVPFDSETINRFYDLPNFDRDGYNAYVSDHLDVNEVIQVLCRPDAEW 60
           MVEGSS S VRG  V FD  TINR+Y LPNF+RD Y  Y S+H+DV+++I+ LC+P AEW
Sbjct: 89  MVEGSSRSFVRGRQVSFDYGTINRYYHLPNFERDEYAIYASEHVDVHQIIRELCQPGAEW 148

Query: 61  VLNGNEVVRFRTTDLHVDHQ 81
           ++N  E +RF++++L V +Q
Sbjct: 149 IINPGEPIRFKSSNLTVSNQ 168

[Close]

BLAST of Lcy05g016550 vs. NCBI nr
Match: XP_008458668.1 (PREDICTED: uncharacterized protein LOC103497996 [Cucumis melo])

HSP 1 Score: 102.4 bits (254), Expect = 1.8e-18
Identity = 44/80 (55.00%), Postives = 61/80 (76.25%), Query Frame = 0


Query: 1   MVEGSSSSLVRGHSVPFDSETINRFYDLPNFDRDGYNAYVSDHLDVNEVIQVLCRPDAEW 60
           MVEGSS S VRG  V FD  TINR+Y LPNF+RD Y  Y S+H+DV+++I+ LC+P AEW
Sbjct: 27  MVEGSSRSFVRGRQVSFDYGTINRYYHLPNFERDEYAIYASEHVDVHQIIRELCQPGAEW 86

Query: 61  VLNGNEVVRFRTTDLHVDHQ 81
           ++N  E +RF++++L V +Q
Sbjct: 87  IINPGEPIRFKSSNLTVSNQ 106

[Close]

BLAST of Lcy05g016550 vs. NCBI nr
Match: EOY13933.1 (Uncharacterized protein TCM_032752 [Theobroma cacao])

HSP 1 Score: 62.4 bits (150), Expect = 2.1e-06
Identity = 27/64 (42.19%), Postives = 35/64 (54.69%), Query Frame = 0


Query: 8   SLVRGHSVPFDSETINRFYDLPNFDRDGYNAYVSDHLDVNEVIQVLCRPDAEWVLNGNEV 67
           + VRG  VPF S+ IN     PN + D Y  Y+ DH D NE+I  LC   A+W  +  E 
Sbjct: 92  AFVRGKHVPFHSQAINELLRTPNIENDEYGQYLGDHQDCNEIISTLCIEGAQWKTSHGEP 151

Query: 68  VRFR 72
           V F+
Sbjct: 152 VSFK 155

[Close]

BLAST of Lcy05g016550 vs. NCBI nr
Match: PIN01433.1 (hypothetical protein CDL12_26059 [Handroanthus impetiginosus])

HSP 1 Score: 58.9 bits (141), Expect = 2.3e-05
Identity = 25/67 (37.31%), Postives = 38/67 (56.72%), Query Frame = 0


Query: 9   LVRGHSVPFDSETINRFYDLPNFDRDGYNAYVSDHLDVNEVIQVLCRPDAEWVLNGNEVV 68
           LVRG  VPFDS TIN  Y++P  + D +  +  + +D  E+ + LC   A+W +   E V
Sbjct: 96  LVRGREVPFDSVTINELYNIPPIELDAFENFCENGIDYEELTRTLCPHGAQWKMTKGEYV 155

Query: 69  RFRTTDL 76
            F++  L
Sbjct: 156 SFKSNCL 162

The following BLAST results are available for this feature:

BLAST of Lcy05g016550 vs.


Match Name	E-value	Identity	Description

BLAST of Lcy05g016550 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KER1	3.0e-19	56.25	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G149380 PE=4 SV=1	[more]
A0A5D3BBY3	8.8e-19	55.00	Putative S-locus lectin protein kinase family protein OS=Cucumis melo var. makuw...	[more]
A0A1S3C7Y0	8.8e-19	55.00	uncharacterized protein LOC103497996 OS=Cucumis melo OX=3656 GN=LOC103497996 PE=...	[more]
A0A0A0KNI1	1.7e-14	61.29	AA_kinase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G468460 P...	[more]
A0A061FAJ6	1.0e-06	42.19	Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_032752 PE=4 SV=1	[more]

BLAST of Lcy05g016550 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN46897.1	6.3e-19	56.25	hypothetical protein Csa_020731 [Cucumis sativus]	[more]
KAA0033353.1	1.8e-18	55.00	putative S-locus lectin protein kinase family protein [Cucumis melo var. makuwa]...	[more]
XP_008458668.1	1.8e-18	55.00	PREDICTED: uncharacterized protein LOC103497996 [Cucumis melo]	[more]
EOY13933.1	2.1e-06	42.19	Uncharacterized protein TCM_032752 [Theobroma cacao]	[more]
PIN01433.1	2.3e-05	37.31	hypothetical protein CDL12_26059 [Handroanthus impetiginosus]	[more]

BLAST of Lcy05g016550 vs. NCBI nr


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy05g016550.1	Lcy05g016550.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016310	phosphorylation
biological_process	GO:0006561	proline biosynthetic process
cellular_component	GO:0005829	cytosol
molecular_function	GO:0005488	binding
molecular_function	GO:0004349	glutamate 5-kinase activity