Lcy05g016300 (gene) Sponge gourd (P93075) v1

Overview
NameLcy05g016300
Typegene
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Descriptionstress-induced protein KIN2-like
LocationChr05: 22339477 .. 22342292 (+)
RNA-Seq ExpressionLcy05g016300
SyntenyLcy05g016300
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGACAACTCTGAAAAGATGAGTTACCACGCTGGAGAAGCCAAGGGTCAAGCTCAGGTTACTCAATTGTTGCCTTTGTTTTTATTAGGAAAAATGTTTTTATTCGATACTATCAATAATGATGTTCATTATGTGTGACAAGCTTAGGTTTCATATCATTTAGTTTTATTAGAAATTTTTTTTTTAATACTATCGATGATGTAGTTATTAGAAGTGACAATAGTACAACTGTATGAAGTTATATTACGATGTAGAATCGCTATCATCACACACTATTTTTTCTTTTGGTGTTTTTTAATATCTATAAAAGAAAAATGGCCGACAACTCTCACAATATGAGCTTCCATGAAGGGCCAAGATCATGTTCTCTATCCATTGTCTTCGTTATCTTTTGAGAGAAACAATTTGATACTACATTGACATCATATTATTGTCATTTTATATTCAATCATGTCACTATTTTGTTTAGCAAGTTATCTCATTCCATTTTTAACCATTGATGACGTAGAAAAGTAATACTATTATAGAGTTTTTACATGCTATAATAGTACCATCATCCTACCGATCACTTATACCCATTTGATTTATTACCATATCAACAAGGGGGTGGTATGATTGAATATAAATGGTAATAGTTGAAAGACATCTCACATATTTTTTTCGTGATATCGATGACTTAGGAGTGATTGGTAACATGTTAGTTTATGTCCACAGGAGAAGGTGAGCAATATGATGGACAAGGCAAGTGATGCAGCTCAATCAACTAAGGAGTCATTACAAGAGACAGGACAGCAGATGAAGGCTAAGGCACAGGGAGTAGTAGACGTTGTCAAGGATGCCGTGAATAAATGAAGCCACCTCTTTCCTACATTTTCATTAATTTACTTTAATGCTCCTTTTTGTGAGAGTTTTTTTTTTTTTTTAAAAAAAAAAAAATATATATATATATATATATTTAGTATTGGATTTACTTCCAACCCTTTCTTTCTCATTATGAGAGGAGAAGAATAATTAGAAGGAGTTCCTTTTGTCTTGTGGGATTTGTTTGCTTCATCATTTTTTAGAAGGGTTGTAAACAATTTAGAGAGTTCTTGTTGGAGTTTTTGTATTGAATTTATATAAAATTCTTTTAGCATTGCATATTATTTTGAATATTTTGAAGGTTTTGGTATAACATTACGAAATAATAATTTGAAAAAGTGAATATAAAAATATGACAATATGAAAATTTCAAATTGTACAATCACATAATCACATAAAAATTATGCACAAACATTTTAATATTGTAGGATAATAATTTTTAAAAGTGAACAAAGAAATATGATAATATTTTAAAAAAGAACAACTAGTGCACTTTAAATAGAAACATTTTTTAAGCATACATGCAAATAATATTTGAAAGTATATAAATAAAACAATTTTTTTGTTTTGAACATATAAATATATAAGACAATTTGGATCTTGGTTTATAAACTTTATTTATTTATTAACTAAACTTCATTTGAATCTGACCTAATAAATTTAATAAGAATGATTTAAAGTATTTATCTTTGTGCATTATGATTTAAAGTAGGAAAAAATACACTTTTAGTCCCTGAGGTTTGGATTAGGTTTCATTTTGGTCCCTGAGTTTTCAAACTCAACAATTTAACCTCTGAGGTTTGATTTTAGTTTCATTTTGGTCCCTCCATCCATTTTTCCGTTAGAAACTAACGGTTTGCTTATTTTTTAATTAAAAAAAATTATTTTTAAATTTTTCTAAATAAAATAATAATAAATTAATTAAAATATTATTTCCTTTATTATTTCTTTTCTCTTTCTTCTTTTTCTTCATCTTCTCCACATCCTTCTTCTTCAAACTCTTCTTCTTATTCAAACCCTCCTTCTTCCATAACCCAGTCACCGGCCACCGTCGACCGCCGCTCGCCGACGGCAGGCAGCCGGTGACTTTTTTTGTTTTTTTTTTCTTCTCTTTTCTTCCTTCTCCAACTTTTCTTGCTTCTTTTTTTTTAAAAAAAAAACATGTAATGCTCAAAGAGATCAACCCAAACTTCCGGAAGAAAACCCACCGCTTGATGTTGTCAGAAAATGCTAAAGGACAAGAAACCCACGCTGAAACAGTCCGAAAATGCCCCTCCTCTGTTTCCAATGGGGGTTTTTCCTCAGTTTAACACGGACTACTCATTTTCCATTTCAATTCTTCCCACAACAACCAGTTCGTTTCTGTAACGTATTGTTTTCCACCAGAAAATCAATTCAACTTTCGAGTTTCAACAATTAAAACAACCATATCGAGCCAAATAACGATTATAATTTAAAATCCTCAAACTGAATTTGATTTAATGGAATATATCTTGAACGTGGTTGAACAGGAAGCAAATCAACACATGACTTCCTCTCACTGTACACCCATTCGAGTCCACAGCTAGATCCAAGACCATCCACACAAGGTATCCATTAATTTTCATTTTAATTTTAATATTTTTCCTAATGAATTTTAATTTTGTTTTTCTTCCCTTTCTTCTCTCTCCCCTCTCCATCCTTCTCGTTTCTTCCCCATCTACGCCACATCGCCATTGCCGCCGTTAATCCGCCGACTGCCGCTGCTAATCCGCCACCACCGCTGCTGACGTCGATTTACTCTTACCTAGATGCTTACAGCCAACCGAATCCCCGCCGGCAGACCAAGGAAGTTATTCGTTTCAGATCTGAAACAGAGGTCCTCTCGACTCAGCACCGACGACGGATCTGAGAGACTTAAAGAGAGAACCCGTGAACGCCCAGATCTTCTGTCGTTGCTTTCTGAGGACCCGTGA

mRNA sequence

ATGGACAACTCTGAAAAGATGAGTTACCACGCTGGAGAAGCCAAGGGTCAAGCTCAGGAGAAGGTGAGCAATATGATGGACAAGGCAAGTGATGCAGCTCAATCAACTAAGGAGTCATTACAAGAGACAGGACAGCAGATGAAGGCTAAGGCACAGGGAGTAGTAGACGTTGTCAAGGATGCCATGCTTACAGCCAACCGAATCCCCGCCGGCAGACCAAGGAAGTTATTCGTTTCAGATCTGAAACAGAGGTCCTCTCGACTCAGCACCGACGACGGATCTGAGAGACTTAAAGAGAGAACCCGTGAACGCCCAGATCTTCTGTCGTTGCTTTCTGAGGACCCGTGA

Coding sequence (CDS)

ATGGACAACTCTGAAAAGATGAGTTACCACGCTGGAGAAGCCAAGGGTCAAGCTCAGGAGAAGGTGAGCAATATGATGGACAAGGCAAGTGATGCAGCTCAATCAACTAAGGAGTCATTACAAGAGACAGGACAGCAGATGAAGGCTAAGGCACAGGGAGTAGTAGACGTTGTCAAGGATGCCATGCTTACAGCCAACCGAATCCCCGCCGGCAGACCAAGGAAGTTATTCGTTTCAGATCTGAAACAGAGGTCCTCTCGACTCAGCACCGACGACGGATCTGAGAGACTTAAAGAGAGAACCCGTGAACGCCCAGATCTTCTGTCGTTGCTTTCTGAGGACCCGTGA

Protein sequence

MDNSEKMSYHAGEAKGQAQEKVSNMMDKASDAAQSTKESLQETGQQMKAKAQGVVDVVKDAMLTANRIPAGRPRKLFVSDLKQRSSRLSTDDGSERLKERTRERPDLLSLLSEDP
Homology
[Close]
BLAST of Lcy05g016300 vs. ExPASy TrEMBL
Match: A0A6J1E333 (stress-induced protein KIN2-like OS=Momordica charantia OX=3673 GN=LOC111026035 PE=4 SV=1)

HSP 1 Score: 99.8 bits (247), Expect = 8.1e-18
Identity = 53/60 (88.33%), Postives = 55/60 (91.67%), Query Frame = 0 

Query: 2  DNSEKMSYHAGEAKGQAQEKVSNMMDKASDAAQSTKESLQETGQQMKAKAQGVVDVVKDA 61
          DNS KMSYHAGEAKGQAQEK SNMMDKASDAAQSTKES+QE GQQMKAKAQG +D VKDA
Sbjct: 3  DNSRKMSYHAGEAKGQAQEKASNMMDKASDAAQSTKESVQEAGQQMKAKAQGALDAVKDA 62

[Close]
BLAST of Lcy05g016300 vs. ExPASy TrEMBL
Match: A0A6J1E4S0 (stress-induced protein KIN2-like OS=Momordica charantia OX=3673 GN=LOC111026055 PE=4 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 1.8e-17
Identity = 52/60 (86.67%), Postives = 55/60 (91.67%), Query Frame = 0 

Query: 2  DNSEKMSYHAGEAKGQAQEKVSNMMDKASDAAQSTKESLQETGQQMKAKAQGVVDVVKDA 61
          DNS+KMSYHAGEAKGQAQEK SNMMDKASDAAQS KES+QE GQQ+KAKAQGV D VKDA
Sbjct: 3  DNSQKMSYHAGEAKGQAQEKASNMMDKASDAAQSAKESMQEAGQQVKAKAQGVADAVKDA 62

[Close]
BLAST of Lcy05g016300 vs. ExPASy TrEMBL
Match: A0A5D3BPC0 (Stress-induced protein KIN2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold169G002090 PE=4 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 2.4e-17
Identity = 52/62 (83.87%), Postives = 56/62 (90.32%), Query Frame = 0 

Query: 1  MDNSEKMSYHAGEAKGQAQEKVSNMMDKASDAAQSTKESLQETGQQMKAKAQGVVDVVKD 60
          MDNS+KMSYHAGEAKGQ QEKVSNMMDKAS+AAQSTKES+QE GQQM AKAQG  D VKD
Sbjct: 1  MDNSQKMSYHAGEAKGQTQEKVSNMMDKASNAAQSTKESVQEAGQQMMAKAQGATDAVKD 60

Query: 61 AM 63
          A+
Sbjct: 61 AV 62

[Close]
BLAST of Lcy05g016300 vs. ExPASy TrEMBL
Match: A0A1S3CA67 (stress-induced protein KIN2-like OS=Cucumis melo OX=3656 GN=LOC103498580 PE=4 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 2.4e-17
Identity = 52/62 (83.87%), Postives = 56/62 (90.32%), Query Frame = 0 

Query: 1  MDNSEKMSYHAGEAKGQAQEKVSNMMDKASDAAQSTKESLQETGQQMKAKAQGVVDVVKD 60
          MDNS+KMSYHAGEAKGQ QEKVSNMMDKAS+AAQSTKES+QE GQQM AKAQG  D VKD
Sbjct: 1  MDNSQKMSYHAGEAKGQTQEKVSNMMDKASNAAQSTKESVQEAGQQMMAKAQGATDAVKD 60

Query: 61 AM 63
          A+
Sbjct: 61 AV 62

[Close]
BLAST of Lcy05g016300 vs. ExPASy TrEMBL
Match: A0A0A0KXN2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G643250 PE=4 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 5.3e-17
Identity = 51/61 (83.61%), Postives = 55/61 (90.16%), Query Frame = 0 

Query: 2  DNSEKMSYHAGEAKGQAQEKVSNMMDKASDAAQSTKESLQETGQQMKAKAQGVVDVVKDA 61
          DNS+KMSYHAGEAKGQ QEK+SNMMDKASDAAQS KES+QETGQQM AKAQG  D VKDA
Sbjct: 3  DNSQKMSYHAGEAKGQTQEKMSNMMDKASDAAQSAKESVQETGQQMMAKAQGAADAVKDA 62

Query: 62 M 63
          +
Sbjct: 63 V 63

[Close]
BLAST of Lcy05g016300 vs. NCBI nr
Match: XP_038891163.1 (stress-induced protein KIN2-like [Benincasa hispida])

HSP 1 Score: 100.1 bits (248), Expect = 1.3e-17
Identity = 52/62 (83.87%), Postives = 58/62 (93.55%), Query Frame = 0 

Query: 1  MDNSEKMSYHAGEAKGQAQEKVSNMMDKASDAAQSTKESLQETGQQMKAKAQGVVDVVKD 60
          MDNS+KMSYHAGEAKGQAQEKVSNMMDKA+DAAQSTKES+QE GQQ+KAKAQG  + VKD
Sbjct: 1  MDNSQKMSYHAGEAKGQAQEKVSNMMDKANDAAQSTKESMQEAGQQIKAKAQGAAEAVKD 60

Query: 61 AM 63
          A+
Sbjct: 61 AV 62

[Close]
BLAST of Lcy05g016300 vs. NCBI nr
Match: XP_022159694.1 (stress-induced protein KIN2-like [Momordica charantia])

HSP 1 Score: 99.8 bits (247), Expect = 1.7e-17
Identity = 53/60 (88.33%), Postives = 55/60 (91.67%), Query Frame = 0 

Query: 2  DNSEKMSYHAGEAKGQAQEKVSNMMDKASDAAQSTKESLQETGQQMKAKAQGVVDVVKDA 61
          DNS KMSYHAGEAKGQAQEK SNMMDKASDAAQSTKES+QE GQQMKAKAQG +D VKDA
Sbjct: 3  DNSRKMSYHAGEAKGQAQEKASNMMDKASDAAQSTKESVQEAGQQMKAKAQGALDAVKDA 62

[Close]
BLAST of Lcy05g016300 vs. NCBI nr
Match: XP_038891080.1 (late embryogenesis abundant protein 2-like [Benincasa hispida])

HSP 1 Score: 99.4 bits (246), Expect = 2.2e-17
Identity = 52/62 (83.87%), Postives = 56/62 (90.32%), Query Frame = 0 

Query: 1  MDNSEKMSYHAGEAKGQAQEKVSNMMDKASDAAQSTKESLQETGQQMKAKAQGVVDVVKD 60
          MDNS+KMSYHAGEAKGQ QEKVSNMMDKASDAAQS KES+QE GQQ+KAKAQG  D VKD
Sbjct: 1  MDNSQKMSYHAGEAKGQTQEKVSNMMDKASDAAQSAKESIQEAGQQVKAKAQGATDAVKD 60

Query: 61 AM 63
          A+
Sbjct: 61 AI 62

[Close]
BLAST of Lcy05g016300 vs. NCBI nr
Match: XP_022159716.1 (stress-induced protein KIN2-like [Momordica charantia])

HSP 1 Score: 98.6 bits (244), Expect = 3.7e-17
Identity = 52/60 (86.67%), Postives = 55/60 (91.67%), Query Frame = 0 

Query: 2  DNSEKMSYHAGEAKGQAQEKVSNMMDKASDAAQSTKESLQETGQQMKAKAQGVVDVVKDA 61
          DNS+KMSYHAGEAKGQAQEK SNMMDKASDAAQS KES+QE GQQ+KAKAQGV D VKDA
Sbjct: 3  DNSQKMSYHAGEAKGQAQEKASNMMDKASDAAQSAKESMQEAGQQVKAKAQGVADAVKDA 62

[Close]
BLAST of Lcy05g016300 vs. NCBI nr
Match: XP_008459449.1 (PREDICTED: stress-induced protein KIN2-like [Cucumis melo] >KAA0039404.1 stress-induced protein KIN2-like [Cucumis melo var. makuwa] >TYK00592.1 stress-induced protein KIN2-like [Cucumis melo var. makuwa])

HSP 1 Score: 98.2 bits (243), Expect = 4.9e-17
Identity = 52/62 (83.87%), Postives = 56/62 (90.32%), Query Frame = 0 

Query: 1  MDNSEKMSYHAGEAKGQAQEKVSNMMDKASDAAQSTKESLQETGQQMKAKAQGVVDVVKD 60
          MDNS+KMSYHAGEAKGQ QEKVSNMMDKAS+AAQSTKES+QE GQQM AKAQG  D VKD
Sbjct: 1  MDNSQKMSYHAGEAKGQTQEKVSNMMDKASNAAQSTKESVQEAGQQMMAKAQGATDAVKD 60

Query: 61 AM 63
          A+
Sbjct: 61 AV 62

[Close]
BLAST of Lcy05g016300 vs. TAIR 10
Match: AT5G38760.1 (Late embryogenesis abundant protein (LEA) family protein )

HSP 1 Score: 74.7 bits (182), Expect = 5.4e-14
Identity = 40/59 (67.80%), Postives = 49/59 (83.05%), Query Frame = 0 

Query: 3  NSEKMSYHAGEAKGQAQEKVSNMMDKASDAAQSTKESLQETGQQMKAKAQGVVDVVKDA 62
          NS+ +S+ AG+AKGQ QEK S MMDKAS+AAQS KESL+ETGQQ+K KAQG  + VK+A
Sbjct: 4  NSQNISFQAGQAKGQTQEKASTMMDKASNAAQSAKESLKETGQQIKEKAQGATESVKNA 62

[Close]
BLAST of Lcy05g016300 vs. TAIR 10
Match: AT3G02480.1 (Late embryogenesis abundant protein (LEA) family protein )

HSP 1 Score: 74.3 bits (181), Expect = 7.0e-14
Identity = 39/60 (65.00%), Postives = 45/60 (75.00%), Query Frame = 0 

Query: 1  MDNSEKMSYHAGEAKGQAQEKVSNMMDKASDAAQSTKESLQETGQQMKAKAQGVVDVVKD 60
          MDN +  SY AG+A GQ +EK   MMDKA DAA S ++SLQ+TGQQMK KAQG  DVVKD
Sbjct: 1  MDNKQNASYQAGQATGQTKEKAGGMMDKAKDAAASAQDSLQQTGQQMKEKAQGAADVVKD 60

[Close]
BLAST of Lcy05g016300 vs. TAIR 10
Match: AT5G53820.1 (Late embryogenesis abundant protein (LEA) family protein )

HSP 1 Score: 73.6 bits (179), Expect = 1.2e-13
Identity = 37/59 (62.71%), Postives = 50/59 (84.75%), Query Frame = 0 

Query: 2  DNSEKMSYHAGEAKGQAQEKVSNMMDKASDAAQSTKESLQETGQQMKAKAQGVVDVVKD 61
          +NS+ MS++AG+AKGQ QEK SN++DKAS+AAQS KES+QE GQQ+K KAQG  + +K+
Sbjct: 3  NNSQSMSFNAGQAKGQTQEKASNLIDKASNAAQSAKESIQEGGQQLKQKAQGASETIKE 61

[Close]
BLAST of Lcy05g016300 vs. TAIR 10
Match: AT5G15970.1 (stress-responsive protein (KIN2) / stress-induced protein (KIN2) / cold-responsive protein (COR6.6) / cold-regulated protein (COR6.6) )

HSP 1 Score: 41.6 bits (96), Expect = 5.0e-04
Identity = 24/60 (40.00%), Postives = 38/60 (63.33%), Query Frame = 0 

Query: 1  MDNSEKMSYHAGEAKGQAQEKVSNMMDKASDAAQSTKESLQETGQQMKAKAQGVVDVVKD 60
          M  + K ++ AG+A G+A+EK + ++DKA DAA +   S Q+ G+ +   A G V+ VKD
Sbjct: 1  MSETNKNAFQAGQAAGKAEEKSNVLLDKAKDAAAAAGASAQQAGKSISDAAVGGVNFVKD 60

The following BLAST results are available for this feature:
BLAST of Lcy05g016300 vs.
Match NameE-valueIdentityDescription
BLAST of Lcy05g016300 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1E3338.1e-1888.33stress-induced protein KIN2-like OS=Momordica charantia OX=3673 GN=LOC111026035 ... [more]
A0A6J1E4S01.8e-1786.67stress-induced protein KIN2-like OS=Momordica charantia OX=3673 GN=LOC111026055 ... [more]
A0A5D3BPC02.4e-1783.87Stress-induced protein KIN2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676... [more]
A0A1S3CA672.4e-1783.87stress-induced protein KIN2-like OS=Cucumis melo OX=3656 GN=LOC103498580 PE=4 SV... [more]
A0A0A0KXN25.3e-1783.61Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G643250 PE=4 SV=1[more]
BLAST of Lcy05g016300 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038891163.11.3e-1783.87stress-induced protein KIN2-like [Benincasa hispida][more]
XP_022159694.11.7e-1788.33stress-induced protein KIN2-like [Momordica charantia][more]
XP_038891080.12.2e-1783.87late embryogenesis abundant protein 2-like [Benincasa hispida][more]
XP_022159716.13.7e-1786.67stress-induced protein KIN2-like [Momordica charantia][more]
XP_008459449.14.9e-1783.87PREDICTED: stress-induced protein KIN2-like [Cucumis melo] >KAA0039404.1 stress-... [more]
BLAST of Lcy05g016300 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G38760.15.4e-1467.80Late embryogenesis abundant protein (LEA) family protein [more]
AT3G02480.17.0e-1465.00Late embryogenesis abundant protein (LEA) family protein [more]
AT5G53820.11.2e-1362.71Late embryogenesis abundant protein (LEA) family protein [more]
AT5G15970.15.0e-0440.00stress-responsive protein (KIN2) / stress-induced protein (KIN2) / cold-responsi... [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D6.10.140.1430coord: 2..64
e-value: 9.6E-6
score: 27.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 77..115
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 28..48
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..51
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 69..115
NoneNo IPR availablePANTHERPTHR34191:SF4LATE EMBRYOGENESIS ABUNDANT PROTEIN (LEA) FAMILY PROTEINcoord: 1..62
IPR039624Stress-induced protein KIN1/KIN2PANTHERPTHR34191LATE EMBRYOGENESIS ABUNDANT PROTEIN (LEA) FAMILY PROTEINcoord: 1..62

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lcy05g016300.1Lcy05g016300.1mRNA