Lcy05g016250 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy05g016250
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	DDE Tnp4 domain-containing protein
Location	Chr05: 22156340 .. 22157140 (+)
RNA-Seq Expression	Lcy05g016250
Synteny	Lcy05g016250

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTGGTGTCGAAACGGTTCGGGCTCGGAATCTCGACCTACCACATACTAGTCCTCGAGGTCTGCTCTGCAATTCGCAAAGTTCTAATGTCGAAATTCCTCCGGTGGCTAAACGATTCAAAATTGGCCAAAATCAAGCAAGAATTTGAGTCGATTTCGGGAATTCCCAAAGTGGGTGGCTCGATTTACACAACCCACATCCTAATCATCACGTCGAAGAACAACGTCGCCGCTTATTTCAACAAACGCCACACCGAATGCAACCAGAAAATTATTGGTCTTCTGAACGACGTTTTCATCGTCAGGAACTCCAGCTACCCATTGACGGACTGGCTTCTGGTGCCGTACTCGGTGCAGAATCTGACGTGGACGCAACACGCTTTAAACGAGAAGGTTTCGAAGATTCAGGCGGCGGCTGAAGGGCGGTGGTCATGTCTGCACAAGAGGACGGAGGTGAAGCTGCAGGAGCTGCCGGTGGTGCTCGGAGCTTGCTGCGTTCTTCACAAGATCTGCGAAATGAGGAAGGAAAGCTTCGATCCAGAGCTGAATTCCGAGCTTTTTGATGATGAAATGATGCCCGAAAGCAATGGACTAAGATCTGTGAGTGCCATTCACTTTTAATCCCTCCTCCCTCCTCCTTCAATTTAAAAAAAAAAACACATAAGCTTTTGTTTTCAAGCAACCTCCAGCGCAGATTTATCTTCACAAGTCACCGGCGGCGATGATTTCATTTTTCCATCTCTAATCATTTATTTCTGGAATGATATTTTGGGCATGTGATTCTTCTTTTAAGTTGCATTTTCC

mRNA sequence

TTGGTGTCGAAACGGTTCGGGCTCGGAATCTCGACCTACCACATACTAGTCCTCGAGGTCTGCTCTGCAATTCGCAAAGTTCTAATGTCGAAATTCCTCCGGTGGCTAAACGATTCAAAATTGGCCAAAATCAAGCAAGAATTTGAGTCGATTTCGGGAATTCCCAAAGTGGGTGGCTCGATTTACACAACCCACATCCTAATCATCACGTCGAAGAACAACGTCGCCGCTTATTTCAACAAACGCCACACCGAATGCAACCAGAAAATTATTGGTCTTCTGAACGACGTTTTCATCGTCAGGAACTCCAGCTACCCATTGACGGACTGGCTTCTGGTGCCGTACTCGGTGCAGAATCTGACGTGGACGCAACACGCTTTAAACGAGAAGGTTTCGAAGATTCAGGCGGCGGCTGAAGGGCGGTGGTCATGTCTGCACAAGAGGACGGAGGTGAAGCTGCAGGAGCTGCCGGTGGTGCTCGGAGCTTGCTGCGTTCTTCACAAGATCTGCGAAATGAGGAAGGAAAGCTTCGATCCAGAGCTGAATTCCGAGCTTTTTGATGATGAAATGATGCCCGAAAGCAATGGACTAAGATCTGTGAGTGCCATTCACTTTTAATCCCTCCTCCCTCCTCCTTCAATTTAAAAAAAAAAACACATAAGCTTTTGTTTTCAAGCAACCTCCAGCGCAGATTTATCTTCACAAGTCACCGGCGGCGATGATTTCATTTTTCCATCTCTAATCATTTATTTCTGGAATGATATTTTGGGCATGTGATTCTTCTTTTAAGTTGCATTTTCC

Coding sequence (CDS)

TTGGTGTCGAAACGGTTCGGGCTCGGAATCTCGACCTACCACATACTAGTCCTCGAGGTCTGCTCTGCAATTCGCAAAGTTCTAATGTCGAAATTCCTCCGGTGGCTAAACGATTCAAAATTGGCCAAAATCAAGCAAGAATTTGAGTCGATTTCGGGAATTCCCAAAGTGGGTGGCTCGATTTACACAACCCACATCCTAATCATCACGTCGAAGAACAACGTCGCCGCTTATTTCAACAAACGCCACACCGAATGCAACCAGAAAATTATTGGTCTTCTGAACGACGTTTTCATCGTCAGGAACTCCAGCTACCCATTGACGGACTGGCTTCTGGTGCCGTACTCGGTGCAGAATCTGACGTGGACGCAACACGCTTTAAACGAGAAGGTTTCGAAGATTCAGGCGGCGGCTGAAGGGCGGTGGTCATGTCTGCACAAGAGGACGGAGGTGAAGCTGCAGGAGCTGCCGGTGGTGCTCGGAGCTTGCTGCGTTCTTCACAAGATCTGCGAAATGAGGAAGGAAAGCTTCGATCCAGAGCTGAATTCCGAGCTTTTTGATGATGAAATGATGCCCGAAAGCAATGGACTAAGATCTGTGAGTGCCATTCACTTTTAA

Protein sequence

LVSKRFGLGISTYHILVLEVCSAIRKVLMSKFLRWLNDSKLAKIKQEFESISGIPKVGGSIYTTHILIITSKNNVAAYFNKRHTECNQKIIGLLNDVFIVRNSSYPLTDWLLVPYSVQNLTWTQHALNEKVSKIQAAAEGRWSCLHKRTEVKLQELPVVLGACCVLHKICEMRKESFDPELNSELFDDEMMPESNGLRSVSAIHF

Homology

[Close]

BLAST of Lcy05g016250 vs. ExPASy Swiss-Prot
Match: Q94K49 (Protein ANTAGONIST OF LIKE HETEROCHROMATIN PROTEIN 1 OS=Arabidopsis thaliana OX=3702 GN=ALP1 PE=1 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 6.5e-07
Identity = 51/226 (22.57%), Postives = 89/226 (39.38%), Query Frame = 0


Query: 2   VSKRFGLGISTYHILVLEVCSAIRKVLMSKFLRWLNDSKLAKIKQEFESISGIPKVGGSI 61
           V   FG+G ST   +      A+ +      LRW +  ++ +IK +FE + G+P   G+I
Sbjct: 125 VGAAFGVGQSTVSQVTWRFIEALEE-RAKHHLRWPDSDRIEEIKSKFEEMYGLPNCCGAI 184

Query: 62  YTTHILI--------------------------------------------ITSKNNVAA 121
            TTHI++                                            ++     + 
Sbjct: 185 DTTHIIMTLPAVQASDDWCDQEKNYSMFLQGVFDHEMRFLNMVTGWPGGMTVSKLLKFSG 244

Query: 122 YF----NKRHTECNQKII--GLLNDVFIVRNSSYPLTDWLLVPYSVQNLTWTQHALNEKV 170
           +F    N +  + N K +  G     ++V   SYPL  WL+ P+   + + +  A NE+ 
Sbjct: 245 FFKLCENAQILDGNPKTLSQGAQIREYVVGGISYPLLPWLITPHDSDHPSDSMVAFNERH 304

[Close]

BLAST of Lcy05g016250 vs. ExPASy Swiss-Prot
Match: Q9M2U3 (Protein ALP1-like OS=Arabidopsis thaliana OX=3702 GN=At3g55350 PE=2 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 1.4e-06
Identity = 59/247 (23.89%), Postives = 96/247 (38.87%), Query Frame = 0


Query: 1   LVSKRFGLGISTYHILVLEVCSAIRKVLMSKFLRWLNDSKLAKIKQEFESISGIPKVGGS 60
           ++ + FG+  ST   +      ++ +  +   L W   SKL +IK +FE ISG+P   G+
Sbjct: 130 VIGETFGMNQSTVSQITWRFVESMEERAI-HHLSW--PSKLDEIKSKFEKISGLPNCCGA 189

Query: 61  IYTTHILI----ITSKNNVAAYFNKRHTECNQKII--------------GLLND------ 120
           I  THI++    +   N V     K  +   Q ++              G LND      
Sbjct: 190 IDITHIVMNLPAVEPSNKVWLDGEKNFSMTLQAVVDPDMRFLDVIAGWPGSLNDDVVLKN 249

Query: 121 ---------------------------VFIVRNSSYPLTDWLLVPYSVQNLTWTQHALNE 180
                                       +IV +S +PL  WLL PY  +  +  Q   N+
Sbjct: 250 SGFYKLVEKGKRLNGEKLPLSERTELREYIVGDSGFPLLPWLLTPYQGKPTSLPQTEFNK 309

Query: 181 KVSKIQAAAEGRWSCLHKRTEV--------KLQELPVVLGACCVLHK-ICEMRKESFDPE 188
           + S+   AA+   S L  R  +            LP ++  CC+LH  I +M  ++ D +
Sbjct: 310 RHSEATKAAQMALSKLKDRWRIINGVMWMPDRNRLPRIIFVCCLLHNIIIDMEDQTLDDQ 369

[Close]

BLAST of Lcy05g016250 vs. ExPASy TrEMBL
Match: A0A5D3CDK0 (Putative nuclease HARBI1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G001910 PE=3 SV=1)

HSP 1 Score: 318.2 bits (814), Expect = 2.6e-83
Identity = 169/253 (66.80%), Postives = 182/253 (71.94%), Query Frame = 0


Query: 1   LVSKRFGLGISTYHILVLEVCSAIRKVLMSKFLRWLNDSKLAKIKQEFESISGIPKVGGS 60
           LVSKRFGLGIST H LVLEVCSAIRKVLM KFL+W ++SKL KIKQEFESISGIPKVGGS
Sbjct: 188 LVSKRFGLGISTCHKLVLEVCSAIRKVLMPKFLQWPDESKLTKIKQEFESISGIPKVGGS 247

Query: 61  IYTTHILIITSKNNVAAYFNKRHTECNQKI------------------------------ 120
           IYTTHI II  KNNVAAYFNKRHTE NQK                               
Sbjct: 248 IYTTHIPIIAPKNNVAAYFNKRHTERNQKTSYSITVQGVVDPSGVFTDVCIGWPGSMPDD 307

Query: 121 -------------IGLLNDVFIVRNSSYPLTDWLLVPYSVQNLTWTQHALNEKVSKIQAA 180
                        +GLLNDVF+V NS YPL DWLLVPY+VQNLTWTQH  NEKV +IQAA
Sbjct: 308 QVLEKSLLYERASMGLLNDVFVVGNSGYPLMDWLLVPYTVQNLTWTQHGFNEKVGEIQAA 367

Query: 181 A-------EGRWSCLHKRTEVKLQELPVVLGACCVLHKICEMRKESFDPELNSELFDDEM 204
           A       +GRW+CL KRTEVKLQELPVVLGACCVLH ICEMRKE FDPEL  E++DDEM
Sbjct: 368 AKAAFGRLKGRWTCLQKRTEVKLQELPVVLGACCVLHNICEMRKEKFDPELKFEVYDDEM 427

[Close]

BLAST of Lcy05g016250 vs. ExPASy TrEMBL
Match: A0A0A0LYY2 (DDE Tnp4 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G589710 PE=3 SV=1)

HSP 1 Score: 317.0 bits (811), Expect = 5.8e-83
Identity = 170/253 (67.19%), Postives = 180/253 (71.15%), Query Frame = 0


Query: 1   LVSKRFGLGISTYHILVLEVCSAIRKVLMSKFLRWLNDSKLAKIKQEFESISGIPKVGGS 60
           LVSKRFGLGIST H LVLEVCSAIRKVLM KFL W ++SKL KIKQEFESISGIPKVGGS
Sbjct: 210 LVSKRFGLGISTCHKLVLEVCSAIRKVLMPKFLNWPDESKLTKIKQEFESISGIPKVGGS 269

Query: 61  IYTTHILIITSKNNVAAYFNKRHTECNQKI------------------------------ 120
           IYTTHI II  KNNVAAYFNKRHTE NQK                               
Sbjct: 270 IYTTHIPIIAPKNNVAAYFNKRHTERNQKTSYSITVQGVVDPSGVFTDVCIGWPGSMPDD 329

Query: 121 -------------IGLLNDVFIVRNSSYPLTDWLLVPYSVQNLTWTQHALNEKVSKIQAA 180
                        +G LNDVFIV NS YPL DWLLVPY+VQNLTWTQH  NEKV +IQAA
Sbjct: 330 QVLEKSLLYERASMGSLNDVFIVGNSGYPLMDWLLVPYTVQNLTWTQHGFNEKVGEIQAA 389

Query: 181 A-------EGRWSCLHKRTEVKLQELPVVLGACCVLHKICEMRKESFDPELNSELFDDEM 204
           A       +GRW+CL KRTEVKLQELPVVLGACCVLH ICEMRKE FDPEL  E++DDEM
Sbjct: 390 AKAAFGRLKGRWTCLQKRTEVKLQELPVVLGACCVLHNICEMRKEKFDPELKFEVYDDEM 449

[Close]

BLAST of Lcy05g016250 vs. ExPASy TrEMBL
Match: A0A1S3BPN5 (putative nuclease HARBI1 OS=Cucumis melo OX=3656 GN=LOC103492343 PE=3 SV=1)

HSP 1 Score: 317.0 bits (811), Expect = 5.8e-83
Identity = 168/253 (66.40%), Postives = 182/253 (71.94%), Query Frame = 0


Query: 1   LVSKRFGLGISTYHILVLEVCSAIRKVLMSKFLRWLNDSKLAKIKQEFESISGIPKVGGS 60
           LVSKRFGLGIST H LVLEVCSAIRKVLM KFL+W ++SKL KIKQEFESISGIPKVGGS
Sbjct: 211 LVSKRFGLGISTCHKLVLEVCSAIRKVLMPKFLQWPDESKLTKIKQEFESISGIPKVGGS 270

Query: 61  IYTTHILIITSKNNVAAYFNKRHTECNQKI------------------------------ 120
           IYTTHI II  +NNVAAYFNKRHTE NQK                               
Sbjct: 271 IYTTHIPIIAPRNNVAAYFNKRHTERNQKTSYSITVQGVVDPSGVFTDVCIGWPGSMPDD 330

Query: 121 -------------IGLLNDVFIVRNSSYPLTDWLLVPYSVQNLTWTQHALNEKVSKIQAA 180
                        +GLLNDVF+V NS YPL DWLLVPY+VQNLTWTQH  NEKV +IQAA
Sbjct: 331 QVLEKSLLYERASMGLLNDVFVVGNSGYPLMDWLLVPYTVQNLTWTQHGFNEKVGEIQAA 390

Query: 181 A-------EGRWSCLHKRTEVKLQELPVVLGACCVLHKICEMRKESFDPELNSELFDDEM 204
           A       +GRW+CL KRTEVKLQELPVVLGACCVLH ICEMRKE FDPEL  E++DDEM
Sbjct: 391 AKAAFGRLKGRWTCLQKRTEVKLQELPVVLGACCVLHNICEMRKEKFDPELKFEVYDDEM 450

[Close]

BLAST of Lcy05g016250 vs. ExPASy TrEMBL
Match: A0A6J1HRQ5 (protein ALP1-like OS=Cucurbita maxima OX=3661 GN=LOC111466889 PE=3 SV=1)

HSP 1 Score: 316.6 bits (810), Expect = 7.5e-83
Identity = 171/253 (67.59%), Postives = 179/253 (70.75%), Query Frame = 0


Query: 1   LVSKRFGLGISTYHILVLEVCSAIRKVLMSKFLRWLNDSKLAKIKQEFESISGIPKVGGS 60
           LVSKRFGLGIST H LVLEVCSAIRKVLM KFL+W  DSKLAKIKQEFESISGIPKVGGS
Sbjct: 199 LVSKRFGLGISTCHKLVLEVCSAIRKVLMPKFLQWPEDSKLAKIKQEFESISGIPKVGGS 258

Query: 61  IYTTHILIITSKNNVAAYFNKRHTECNQKI------------------------------ 120
           IYTTHI II  KNNVAAYFNKRHTE NQK                               
Sbjct: 259 IYTTHIPIIAPKNNVAAYFNKRHTERNQKTSYSITVQGVVDPAGVFTDVCIGWPGSMPDD 318

Query: 121 -------------IGLLNDVFIVRNSSYPLTDWLLVPYSVQNLTWTQHALNEKVSKIQAA 180
                        +GLL DV IV NS YPLTDWLLVPYS QNLTWTQHA NEKVS+IQ A
Sbjct: 319 QVLEKSALFERANMGLLKDVSIVGNSGYPLTDWLLVPYSAQNLTWTQHAFNEKVSEIQGA 378

Query: 181 A-------EGRWSCLHKRTEVKLQELPVVLGACCVLHKICEMRKESFDPELNSELFDDEM 204
           A       +GRW+CL KRTEVKLQELPVVLGACCVLH ICEMRKE FDPEL  E FDDEM
Sbjct: 379 AKAAFGRLKGRWTCLQKRTEVKLQELPVVLGACCVLHNICEMRKERFDPELKFEFFDDEM 438

[Close]

BLAST of Lcy05g016250 vs. ExPASy TrEMBL
Match: A0A6J1F642 (protein ALP1-like OS=Cucurbita moschata OX=3662 GN=LOC111441167 PE=3 SV=1)

HSP 1 Score: 315.1 bits (806), Expect = 2.2e-82
Identity = 170/253 (67.19%), Postives = 179/253 (70.75%), Query Frame = 0


Query: 1   LVSKRFGLGISTYHILVLEVCSAIRKVLMSKFLRWLNDSKLAKIKQEFESISGIPKVGGS 60
           LVSKRFGLGIST H LVLEVCSAIRKVLM KFL+W  +SKLAKIKQEFESISGIPKVGGS
Sbjct: 200 LVSKRFGLGISTCHKLVLEVCSAIRKVLMPKFLQWPEESKLAKIKQEFESISGIPKVGGS 259

Query: 61  IYTTHILIITSKNNVAAYFNKRHTECNQKI------------------------------ 120
           IYTTHI II  KNNVAAYFNKRHTE NQK                               
Sbjct: 260 IYTTHIPIIAPKNNVAAYFNKRHTERNQKTSYSITVQGVVDPAGVFTDVCIGWPGSMPDD 319

Query: 121 -------------IGLLNDVFIVRNSSYPLTDWLLVPYSVQNLTWTQHALNEKVSKIQAA 180
                        +GLL DV IV NS YPLTDWLLVPYS QNLTWTQHA NEKVS+IQ A
Sbjct: 320 QVLEKSALFERANMGLLKDVSIVGNSGYPLTDWLLVPYSAQNLTWTQHAFNEKVSEIQGA 379

Query: 181 A-------EGRWSCLHKRTEVKLQELPVVLGACCVLHKICEMRKESFDPELNSELFDDEM 204
           A       +GRW+CL KRTEVKLQELPVVLGACCVLH ICEMRKE FDPEL  E FDDEM
Sbjct: 380 AKAAFGRLKGRWTCLQKRTEVKLQELPVVLGACCVLHNICEMRKERFDPELKFEFFDDEM 439

[Close]

BLAST of Lcy05g016250 vs. NCBI nr
Match: KAA0055806.1 (putative nuclease HARBI1 [Cucumis melo var. makuwa] >TYK10057.1 putative nuclease HARBI1 [Cucumis melo var. makuwa])

HSP 1 Score: 318.2 bits (814), Expect = 5.3e-83
Identity = 169/253 (66.80%), Postives = 182/253 (71.94%), Query Frame = 0


Query: 1   LVSKRFGLGISTYHILVLEVCSAIRKVLMSKFLRWLNDSKLAKIKQEFESISGIPKVGGS 60
           LVSKRFGLGIST H LVLEVCSAIRKVLM KFL+W ++SKL KIKQEFESISGIPKVGGS
Sbjct: 188 LVSKRFGLGISTCHKLVLEVCSAIRKVLMPKFLQWPDESKLTKIKQEFESISGIPKVGGS 247

Query: 61  IYTTHILIITSKNNVAAYFNKRHTECNQKI------------------------------ 120
           IYTTHI II  KNNVAAYFNKRHTE NQK                               
Sbjct: 248 IYTTHIPIIAPKNNVAAYFNKRHTERNQKTSYSITVQGVVDPSGVFTDVCIGWPGSMPDD 307

Query: 121 -------------IGLLNDVFIVRNSSYPLTDWLLVPYSVQNLTWTQHALNEKVSKIQAA 180
                        +GLLNDVF+V NS YPL DWLLVPY+VQNLTWTQH  NEKV +IQAA
Sbjct: 308 QVLEKSLLYERASMGLLNDVFVVGNSGYPLMDWLLVPYTVQNLTWTQHGFNEKVGEIQAA 367

Query: 181 A-------EGRWSCLHKRTEVKLQELPVVLGACCVLHKICEMRKESFDPELNSELFDDEM 204
           A       +GRW+CL KRTEVKLQELPVVLGACCVLH ICEMRKE FDPEL  E++DDEM
Sbjct: 368 AKAAFGRLKGRWTCLQKRTEVKLQELPVVLGACCVLHNICEMRKEKFDPELKFEVYDDEM 427

[Close]

BLAST of Lcy05g016250 vs. NCBI nr
Match: XP_038880089.1 (protein ALP1-like [Benincasa hispida])

HSP 1 Score: 317.8 bits (813), Expect = 7.0e-83
Identity = 170/253 (67.19%), Postives = 182/253 (71.94%), Query Frame = 0


Query: 1   LVSKRFGLGISTYHILVLEVCSAIRKVLMSKFLRWLNDSKLAKIKQEFESISGIPKVGGS 60
           LVSKRFGLGIST H LVLEVCSAIRKVLM KFL+W ++SKL KIKQEFESISGIPKVGGS
Sbjct: 210 LVSKRFGLGISTCHKLVLEVCSAIRKVLMPKFLQWPDESKLTKIKQEFESISGIPKVGGS 269

Query: 61  IYTTHILIITSKNNVAAYFNKRHTECNQKI------------------------------ 120
           IYTTHI II  KNNVAAYFNKRHTE NQK                               
Sbjct: 270 IYTTHIPIIAPKNNVAAYFNKRHTERNQKTSYSITVQGVVDPAGVFTDVCIGWPGSMPDD 329

Query: 121 -------------IGLLNDVFIVRNSSYPLTDWLLVPYSVQNLTWTQHALNEKVSKIQAA 180
                        +GLLNDVFIV NS YPL DWLLVPY+VQNLTWTQH  NEKV +IQAA
Sbjct: 330 QVLEKSVLFERANMGLLNDVFIVGNSGYPLMDWLLVPYTVQNLTWTQHGFNEKVGEIQAA 389

Query: 181 A-------EGRWSCLHKRTEVKLQELPVVLGACCVLHKICEMRKESFDPELNSELFDDEM 204
           A       +GRWSCL KRTEVKLQELPVVLGACCVLH ICE+RKE FDP+L  EL+DDEM
Sbjct: 390 AKTAFGRLKGRWSCLQKRTEVKLQELPVVLGACCVLHNICEIRKEKFDPDLKFELYDDEM 449

[Close]

BLAST of Lcy05g016250 vs. NCBI nr
Match: XP_004144012.1 (protein ALP1-like [Cucumis sativus])

HSP 1 Score: 317.0 bits (811), Expect = 1.2e-82
Identity = 170/253 (67.19%), Postives = 180/253 (71.15%), Query Frame = 0


Query: 1   LVSKRFGLGISTYHILVLEVCSAIRKVLMSKFLRWLNDSKLAKIKQEFESISGIPKVGGS 60
           LVSKRFGLGIST H LVLEVCSAIRKVLM KFL W ++SKL KIKQEFESISGIPKVGGS
Sbjct: 210 LVSKRFGLGISTCHKLVLEVCSAIRKVLMPKFLNWPDESKLTKIKQEFESISGIPKVGGS 269

Query: 61  IYTTHILIITSKNNVAAYFNKRHTECNQKI------------------------------ 120
           IYTTHI II  KNNVAAYFNKRHTE NQK                               
Sbjct: 270 IYTTHIPIIAPKNNVAAYFNKRHTERNQKTSYSITVQGVVDPSGVFTDVCIGWPGSMPDD 329

Query: 121 -------------IGLLNDVFIVRNSSYPLTDWLLVPYSVQNLTWTQHALNEKVSKIQAA 180
                        +G LNDVFIV NS YPL DWLLVPY+VQNLTWTQH  NEKV +IQAA
Sbjct: 330 QVLEKSLLYERASMGSLNDVFIVGNSGYPLMDWLLVPYTVQNLTWTQHGFNEKVGEIQAA 389

Query: 181 A-------EGRWSCLHKRTEVKLQELPVVLGACCVLHKICEMRKESFDPELNSELFDDEM 204
           A       +GRW+CL KRTEVKLQELPVVLGACCVLH ICEMRKE FDPEL  E++DDEM
Sbjct: 390 AKAAFGRLKGRWTCLQKRTEVKLQELPVVLGACCVLHNICEMRKEKFDPELKFEVYDDEM 449

[Close]

BLAST of Lcy05g016250 vs. NCBI nr
Match: XP_008450882.1 (PREDICTED: putative nuclease HARBI1 [Cucumis melo])

HSP 1 Score: 317.0 bits (811), Expect = 1.2e-82
Identity = 168/253 (66.40%), Postives = 182/253 (71.94%), Query Frame = 0


Query: 1   LVSKRFGLGISTYHILVLEVCSAIRKVLMSKFLRWLNDSKLAKIKQEFESISGIPKVGGS 60
           LVSKRFGLGIST H LVLEVCSAIRKVLM KFL+W ++SKL KIKQEFESISGIPKVGGS
Sbjct: 211 LVSKRFGLGISTCHKLVLEVCSAIRKVLMPKFLQWPDESKLTKIKQEFESISGIPKVGGS 270

Query: 61  IYTTHILIITSKNNVAAYFNKRHTECNQKI------------------------------ 120
           IYTTHI II  +NNVAAYFNKRHTE NQK                               
Sbjct: 271 IYTTHIPIIAPRNNVAAYFNKRHTERNQKTSYSITVQGVVDPSGVFTDVCIGWPGSMPDD 330

Query: 121 -------------IGLLNDVFIVRNSSYPLTDWLLVPYSVQNLTWTQHALNEKVSKIQAA 180
                        +GLLNDVF+V NS YPL DWLLVPY+VQNLTWTQH  NEKV +IQAA
Sbjct: 331 QVLEKSLLYERASMGLLNDVFVVGNSGYPLMDWLLVPYTVQNLTWTQHGFNEKVGEIQAA 390

Query: 181 A-------EGRWSCLHKRTEVKLQELPVVLGACCVLHKICEMRKESFDPELNSELFDDEM 204
           A       +GRW+CL KRTEVKLQELPVVLGACCVLH ICEMRKE FDPEL  E++DDEM
Sbjct: 391 AKAAFGRLKGRWTCLQKRTEVKLQELPVVLGACCVLHNICEMRKEKFDPELKFEVYDDEM 450

[Close]

BLAST of Lcy05g016250 vs. NCBI nr
Match: KAE8653438.1 (hypothetical protein Csa_007306 [Cucumis sativus])

HSP 1 Score: 317.0 bits (811), Expect = 1.2e-82
Identity = 170/253 (67.19%), Postives = 180/253 (71.15%), Query Frame = 0


Query: 1   LVSKRFGLGISTYHILVLEVCSAIRKVLMSKFLRWLNDSKLAKIKQEFESISGIPKVGGS 60
           LVSKRFGLGIST H LVLEVCSAIRKVLM KFL W ++SKL KIKQEFESISGIPKVGGS
Sbjct: 281 LVSKRFGLGISTCHKLVLEVCSAIRKVLMPKFLNWPDESKLTKIKQEFESISGIPKVGGS 340

Query: 61  IYTTHILIITSKNNVAAYFNKRHTECNQKI------------------------------ 120
           IYTTHI II  KNNVAAYFNKRHTE NQK                               
Sbjct: 341 IYTTHIPIIAPKNNVAAYFNKRHTERNQKTSYSITVQGVVDPSGVFTDVCIGWPGSMPDD 400

Query: 121 -------------IGLLNDVFIVRNSSYPLTDWLLVPYSVQNLTWTQHALNEKVSKIQAA 180
                        +G LNDVFIV NS YPL DWLLVPY+VQNLTWTQH  NEKV +IQAA
Sbjct: 401 QVLEKSLLYERASMGSLNDVFIVGNSGYPLMDWLLVPYTVQNLTWTQHGFNEKVGEIQAA 460

Query: 181 A-------EGRWSCLHKRTEVKLQELPVVLGACCVLHKICEMRKESFDPELNSELFDDEM 204
           A       +GRW+CL KRTEVKLQELPVVLGACCVLH ICEMRKE FDPEL  E++DDEM
Sbjct: 461 AKAAFGRLKGRWTCLQKRTEVKLQELPVVLGACCVLHNICEMRKEKFDPELKFEVYDDEM 520

[Close]

BLAST of Lcy05g016250 vs. TAIR 10
Match: AT5G12010.1 (unknown protein; INVOLVED IN: response to salt stress; LOCATED IN: chloroplast, plasma membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G29780.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 244.2 bits (622), Expect = 9.1e-65
Identity = 131/254 (51.57%), Postives = 161/254 (63.39%), Query Frame = 0


Query: 1   LVSKRFGLGISTYHILVLEVCSAIRKVLMSKFLRWLNDSKLAKIKQEFESISGIPKVGGS 60
           LVSK+FGLGIST H LVLEVC AI+ VLM K+L+W +D  L  I++ FES+SGIP V GS
Sbjct: 229 LVSKKFGLGISTCHKLVLEVCKAIKDVLMPKYLQWPDDESLRNIRERFESVSGIPNVVGS 288

Query: 61  IYTTHILIITSKNNVAAYFNKRHTECNQKII----------------------------- 120
           +YTTHI II  K +VA+YFNKRHTE NQK                               
Sbjct: 289 MYTTHIPIIAPKISVASYFNKRHTERNQKTSYSITIQAVVNPKGVFTDLCIGWPGSMPDD 348

Query: 121 ---------------GLLNDVFIVRNSSYPLTDWLLVPYSVQNLTWTQHALNEKVSKIQA 180
                          GLL  +++     +PL DW+LVPY+ QNLTWTQHA NEK+S++Q 
Sbjct: 349 KVLEKSLLYQRANNGGLLKGMWVAGGPGHPLLDWVLVPYTQQNLTWTQHAFNEKMSEVQG 408

Query: 181 AA-------EGRWSCLHKRTEVKLQELPVVLGACCVLHKICEMRKESFDPELNSELFDDE 204
            A       +GRW+CL KRTEVKLQ+LP VLGACCVLH ICEMR+E  +PEL  E+ DDE
Sbjct: 409 VAKEAFGRLKGRWACLQKRTEVKLQDLPTVLGACCVLHNICEMREEKMEPELMVEVIDDE 468

[Close]

BLAST of Lcy05g016250 vs. TAIR 10
Match: AT4G29780.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G12010.1); Has 945 Blast hits to 944 proteins in 87 species: Archae - 0; Bacteria - 0; Metazoa - 519; Fungi - 43; Plants - 365; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). )

HSP 1 Score: 239.2 bits (609), Expect = 2.9e-63
Identity = 133/254 (52.36%), Postives = 158/254 (62.20%), Query Frame = 0


Query: 2   VSKRFGLGISTYHILVLEVCSAIRKVLMSKFLRWLNDSKLAKIKQEFESISGIPKVGGSI 61
           VS+RFGLGIST H LV+EVC AI  VLM K+L W +DS++   K +FES+  IP V GSI
Sbjct: 268 VSERFGLGISTCHKLVIEVCRAIYDVLMPKYLLWPSDSEINSTKAKFESVHKIPNVVGSI 327

Query: 62  YTTHILIITSKNNVAAYFNKRHTECNQKII------------------------------ 121
           YTTHI II  K +VAAYFNKRHTE NQK                                
Sbjct: 328 YTTHIPIIAPKVHVAAYFNKRHTERNQKTSYSITVQGVVNADGIFTDVCIGNPGSLTDDQ 387

Query: 122 --------------GLLNDVFIVRNSSYPLTDWLLVPYSVQNLTWTQHALNEKVSKIQAA 181
                         G+L D +IV NS +PLTD+LLVPY+ QNLTWTQHA NE + +IQ  
Sbjct: 388 ILEKSSLSRQRAARGMLRDSWIVGNSGFPLTDYLLVPYTRQNLTWTQHAFNESIGEIQGI 447

Query: 182 A-------EGRWSCLHKRTEVKLQELPVVLGACCVLHKICEMRKESFDPELNSELFDDEM 205
           A       +GRW+CL KRTEVKLQ+LP VLGACCVLH ICEMRKE   PEL  E+FDD  
Sbjct: 448 ATAAFERLKGRWACLQKRTEVKLQDLPYVLGACCVLHNICEMRKEEMLPELKFEVFDDVA 507

[Close]

BLAST of Lcy05g016250 vs. TAIR 10
Match: AT3G63270.1 (CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (InterPro:IPR006912); BEST Arabidopsis thaliana protein match is: PIF / Ping-Pong family of plant transposases (TAIR:AT3G55350.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 55.8 bits (133), Expect = 4.6e-08
Identity = 51/226 (22.57%), Postives = 89/226 (39.38%), Query Frame = 0


Query: 2   VSKRFGLGISTYHILVLEVCSAIRKVLMSKFLRWLNDSKLAKIKQEFESISGIPKVGGSI 61
           V   FG+G ST   +      A+ +      LRW +  ++ +IK +FE + G+P   G+I
Sbjct: 125 VGAAFGVGQSTVSQVTWRFIEALEE-RAKHHLRWPDSDRIEEIKSKFEEMYGLPNCCGAI 184

Query: 62  YTTHILI--------------------------------------------ITSKNNVAA 121
            TTHI++                                            ++     + 
Sbjct: 185 DTTHIIMTLPAVQASDDWCDQEKNYSMFLQGVFDHEMRFLNMVTGWPGGMTVSKLLKFSG 244

Query: 122 YF----NKRHTECNQKII--GLLNDVFIVRNSSYPLTDWLLVPYSVQNLTWTQHALNEKV 170
           +F    N +  + N K +  G     ++V   SYPL  WL+ P+   + + +  A NE+ 
Sbjct: 245 FFKLCENAQILDGNPKTLSQGAQIREYVVGGISYPLLPWLITPHDSDHPSDSMVAFNERH 304

[Close]

BLAST of Lcy05g016250 vs. TAIR 10
Match: AT3G55350.1 (PIF / Ping-Pong family of plant transposases )

HSP 1 Score: 54.7 bits (130), Expect = 1.0e-07
Identity = 59/247 (23.89%), Postives = 96/247 (38.87%), Query Frame = 0


Query: 1   LVSKRFGLGISTYHILVLEVCSAIRKVLMSKFLRWLNDSKLAKIKQEFESISGIPKVGGS 60
           ++ + FG+  ST   +      ++ +  +   L W   SKL +IK +FE ISG+P   G+
Sbjct: 130 VIGETFGMNQSTVSQITWRFVESMEERAI-HHLSW--PSKLDEIKSKFEKISGLPNCCGA 189

Query: 61  IYTTHILI----ITSKNNVAAYFNKRHTECNQKII--------------GLLND------ 120
           I  THI++    +   N V     K  +   Q ++              G LND      
Sbjct: 190 IDITHIVMNLPAVEPSNKVWLDGEKNFSMTLQAVVDPDMRFLDVIAGWPGSLNDDVVLKN 249

Query: 121 ---------------------------VFIVRNSSYPLTDWLLVPYSVQNLTWTQHALNE 180
                                       +IV +S +PL  WLL PY  +  +  Q   N+
Sbjct: 250 SGFYKLVEKGKRLNGEKLPLSERTELREYIVGDSGFPLLPWLLTPYQGKPTSLPQTEFNK 309

Query: 181 KVSKIQAAAEGRWSCLHKRTEV--------KLQELPVVLGACCVLHK-ICEMRKESFDPE 188
           + S+   AA+   S L  R  +            LP ++  CC+LH  I +M  ++ D +
Sbjct: 310 RHSEATKAAQMALSKLKDRWRIINGVMWMPDRNRLPRIIFVCCLLHNIIIDMEDQTLDDQ 369

The following BLAST results are available for this feature:

BLAST of Lcy05g016250 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94K49	6.5e-07	22.57	Protein ANTAGONIST OF LIKE HETEROCHROMATIN PROTEIN 1 OS=Arabidopsis thaliana OX=...	[more]
Q9M2U3	1.4e-06	23.89	Protein ALP1-like OS=Arabidopsis thaliana OX=3702 GN=At3g55350 PE=2 SV=1	[more]

BLAST of Lcy05g016250 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CDK0	2.6e-83	66.80	Putative nuclease HARBI1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol...	[more]
A0A0A0LYY2	5.8e-83	67.19	DDE Tnp4 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G589710 PE...	[more]
A0A1S3BPN5	5.8e-83	66.40	putative nuclease HARBI1 OS=Cucumis melo OX=3656 GN=LOC103492343 PE=3 SV=1	[more]
A0A6J1HRQ5	7.5e-83	67.59	protein ALP1-like OS=Cucurbita maxima OX=3661 GN=LOC111466889 PE=3 SV=1	[more]
A0A6J1F642	2.2e-82	67.19	protein ALP1-like OS=Cucurbita moschata OX=3662 GN=LOC111441167 PE=3 SV=1	[more]

BLAST of Lcy05g016250 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0055806.1	5.3e-83	66.80	putative nuclease HARBI1 [Cucumis melo var. makuwa] >TYK10057.1 putative nucleas...	[more]
XP_038880089.1	7.0e-83	67.19	protein ALP1-like [Benincasa hispida]	[more]
XP_004144012.1	1.2e-82	67.19	protein ALP1-like [Cucumis sativus]	[more]
XP_008450882.1	1.2e-82	66.40	PREDICTED: putative nuclease HARBI1 [Cucumis melo]	[more]
KAE8653438.1	1.2e-82	67.19	hypothetical protein Csa_007306 [Cucumis sativus]	[more]

BLAST of Lcy05g016250 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G12010.1	9.1e-65	51.57	unknown protein; INVOLVED IN: response to salt stress; LOCATED IN: chloroplast, ...	[more]
AT4G29780.1	2.9e-63	52.36	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT3G63270.1	4.6e-08	22.57	CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (Int...	[more]
AT3G55350.1	1.0e-07	23.89	PIF / Ping-Pong family of plant transposases	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR027806	Harbinger transposase-derived nuclease domain	PFAM	PF13359	DDE_Tnp_4	coord: 97..168 e-value: 1.6E-8 score: 34.4
None	No IPR available	PANTHER	PTHR22930:SF199	NUCLEASE	coord: 92..204 coord: 2..90
None	No IPR available	PANTHER	PTHR22930	UNCHARACTERIZED	coord: 92..204 coord: 2..90

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy05g016250.1	Lcy05g016250.1	mRNA