Lcy05g016210 (gene) Sponge gourd (P93075) v1

Overview
NameLcy05g016210
Typegene
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionRetrotransposon protein
LocationChr05: 22087024 .. 22088366 (+)
RNA-Seq ExpressionLcy05g016210
SyntenyLcy05g016210
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATCCCGATGATCTAGATGAGCATGAACTAGTGGCCATATTCACAGCCTTCACCACAACGCAAGCTCAGGTTTTCCTACTCTTAGATCTATATATGAACGATCATAGAAGAATAGAACACCAATCACCCTACCTCCGACACCACATTAGGCAGCTAACATTCTTCAGACTTATACACAAGTCTGACTTACGTTGTCGTGAGAGTACAAGGATGGACAGAAGATGTTTTGCCATACTTTGCACCTTGTTAAGAACAGTTGCCGGCTTAACCGGAACAGAGGTCGTAGATGTAGAAGAGATGGTTGCCATTTTCTTACACATCCTAGCCCATGACGTTAAAAATCGAGTAGTTCGTACGCAGTTTGCTAGGTCTGGGGAGACAGTTTCTAGGCACTTCAACTCCGTCCTTCACGGGGTGTTACGACATGAAGTTCTTATAAAAAATCCTGAGCCAATCACGACCTCCTGTACGGATCCGAGGTGGAAATGGTTTCAGGTATAAATCATTAATCATCCAACTTTATCTAAGTCTGGCCTCACTTCTAGTGTTAGAAACGTGAACCACTATTGCCTATACTATGTCAACGCAGAATTGCCTTGGTGCGTTAGATGGAACATACGTCAAGGTCAATGTTAGTGTCCTCGATCGTCCGAGGTATAGAACAAGGAAAGGTGAAATTGCAACAAACATGTTTGCTGTTTGTGATACAGAAGGAGATTTCACATTCGTCCTACCTGGGTGGGAAGGGTCTGCCGCTGATTCTCGAGTTCTTAGAGATGCAATATCACGACCGAACGGACTAAAAGTTCCGAAGGGTAAATAATCAAACATTTTTTCCTTTCACCATAAAACCCTTAGGAAGATGAACTGAGCCAATATAACATTCCACAGGATATCTGTGCGATGCTGGGTACCCTAATGCAGAGGGTTTCCTGGCACCGTATAGAGGAGAACGTTACCACCTATCTGAATGGCGTGGTGCGGGGAATGCACCAACTACTCCCAAAGAATTCTTCAACATGAAGCATTCATCTGCAAGGAATGTGATCGAGAGGGCATTCGGTTTGTTAAAAGGAAGGTGGGCCATCCTCCACTCGAAATCGTACTATCCAGTTCGAATTCAAGGACGGACCATTGCAGCGTGCTGCTTACTGCACAATCTTATCAATAGGGAGATGGGTGACCGTGAAATTCCCGATGATCTAGATGAGGTGGATTCTGCATCGGCTACAACTGATTCTGAGAATATCAATTTCATTGAGACTTCCGACGAATGGAGCCGGTGGAGGGATGACTTGGCAGAACATATGTTTTCGGAATGGGAGTTACGTAATACTTAG

mRNA sequence

ATGGATCCCGATGATCTAGATGAGCATGAACTAGTGGCCATATTCACAGCCTTCACCACAACGCAAGCTCAGGTTTTCCTACTCTTAGATCTATATATGAACGATCATAGAAGAATAGAACACCAATCACCCTACCTCCGACACCACATTAGGCAGCTAACATTCTTCAGACTTATACACAAGTCTGACTTACGTTGTCGTGAGAGTACAAGGATGGACAGAAGATGTTTTGCCATACTTTGCACCTTGTTAAGAACAGTTGCCGGCTTAACCGGAACAGAGGTCGTAGATGTAGAAGAGATGGTTGCCATTTTCTTACACATCCTAGCCCATGACGTTAAAAATCGAGTAGTTCGTACGCAGTTTGCTAGGTCTGGGGAGACAGTTTCTAGGCACTTCAACTCCGTCCTTCACGGGGTGTTACGACATGAAGTTCTTATAAAAAATCCTGAGCCAATCACGACCTCCTGTACGGATCCGAGGTGGAAATGGTTTCAGAATTGCCTTGGTGCGTTAGATGGAACATACGTCAAGGTCAATGTTAGTGTCCTCGATCGTCCGAGGTATAGAACAAGGAAAGGTGAAATTGCAACAAACATGTTTGCTGTTTGTGATACAGAAGGAGATTTCACATTCGTCCTACCTGGGTGGGAAGGGTCTGCCGCTGATTCTCGAGTTCTTAGAGATGCAATATCACGACCGAACGGACTAAAAGTTCCGAAGGGATATCTGTGCGATGCTGGGTACCCTAATGCAGAGGGTTTCCTGGCACCGTATAGAGGAGAACGTTACCACCTATCTGAATGGCGTGGTGCGGGGAATGCACCAACTACTCCCAAAGAATTCTTCAACATGAAGCATTCATCTGCAAGGAATGTGATCGAGAGGGCATTCGGTTTGTTAAAAGGAAGGTGGGCCATCCTCCACTCGAAATCGTACTATCCAGTTCGAATTCAAGGACGGACCATTGCAGCGTGCTGCTTACTGCACAATCTTATCAATAGGGAGATGGGTGACCGTGAAATTCCCGATGATCTAGATGAGGTGGATTCTGCATCGGCTACAACTGATTCTGAGAATATCAATTTCATTGAGACTTCCGACGAATGGAGCCGGTGGAGGGATGACTTGGCAGAACATATGTTTTCGGAATGGGAGTTACGTAATACTTAG

Coding sequence (CDS)

ATGGATCCCGATGATCTAGATGAGCATGAACTAGTGGCCATATTCACAGCCTTCACCACAACGCAAGCTCAGGTTTTCCTACTCTTAGATCTATATATGAACGATCATAGAAGAATAGAACACCAATCACCCTACCTCCGACACCACATTAGGCAGCTAACATTCTTCAGACTTATACACAAGTCTGACTTACGTTGTCGTGAGAGTACAAGGATGGACAGAAGATGTTTTGCCATACTTTGCACCTTGTTAAGAACAGTTGCCGGCTTAACCGGAACAGAGGTCGTAGATGTAGAAGAGATGGTTGCCATTTTCTTACACATCCTAGCCCATGACGTTAAAAATCGAGTAGTTCGTACGCAGTTTGCTAGGTCTGGGGAGACAGTTTCTAGGCACTTCAACTCCGTCCTTCACGGGGTGTTACGACATGAAGTTCTTATAAAAAATCCTGAGCCAATCACGACCTCCTGTACGGATCCGAGGTGGAAATGGTTTCAGAATTGCCTTGGTGCGTTAGATGGAACATACGTCAAGGTCAATGTTAGTGTCCTCGATCGTCCGAGGTATAGAACAAGGAAAGGTGAAATTGCAACAAACATGTTTGCTGTTTGTGATACAGAAGGAGATTTCACATTCGTCCTACCTGGGTGGGAAGGGTCTGCCGCTGATTCTCGAGTTCTTAGAGATGCAATATCACGACCGAACGGACTAAAAGTTCCGAAGGGATATCTGTGCGATGCTGGGTACCCTAATGCAGAGGGTTTCCTGGCACCGTATAGAGGAGAACGTTACCACCTATCTGAATGGCGTGGTGCGGGGAATGCACCAACTACTCCCAAAGAATTCTTCAACATGAAGCATTCATCTGCAAGGAATGTGATCGAGAGGGCATTCGGTTTGTTAAAAGGAAGGTGGGCCATCCTCCACTCGAAATCGTACTATCCAGTTCGAATTCAAGGACGGACCATTGCAGCGTGCTGCTTACTGCACAATCTTATCAATAGGGAGATGGGTGACCGTGAAATTCCCGATGATCTAGATGAGGTGGATTCTGCATCGGCTACAACTGATTCTGAGAATATCAATTTCATTGAGACTTCCGACGAATGGAGCCGGTGGAGGGATGACTTGGCAGAACATATGTTTTCGGAATGGGAGTTACGTAATACTTAG

Protein sequence

MDPDDLDEHELVAIFTAFTTTQAQVFLLLDLYMNDHRRIEHQSPYLRHHIRQLTFFRLIHKSDLRCRESTRMDRRCFAILCTLLRTVAGLTGTEVVDVEEMVAIFLHILAHDVKNRVVRTQFARSGETVSRHFNSVLHGVLRHEVLIKNPEPITTSCTDPRWKWFQNCLGALDGTYVKVNVSVLDRPRYRTRKGEIATNMFAVCDTEGDFTFVLPGWEGSAADSRVLRDAISRPNGLKVPKGYLCDAGYPNAEGFLAPYRGERYHLSEWRGAGNAPTTPKEFFNMKHSSARNVIERAFGLLKGRWAILHSKSYYPVRIQGRTIAACCLLHNLINREMGDREIPDDLDEVDSASATTDSENINFIETSDEWSRWRDDLAEHMFSEWELRNT
Homology
BLAST of Lcy05g016210 vs. ExPASy TrEMBL
Match: A0A5D3BDX0 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1112G00360 PE=3 SV=1)

HSP 1 Score: 587.4 bits (1513), Expect = 4.3e-164
Identity = 279/387 (72.09%), Postives = 325/387 (83.98%), Query Frame = 0

Query: 6   LDEHELVAIFTAFTTTQAQVFLLLDLYMNDHRRIEHQSPYLRHHIRQLTFFRLIHKSDLR 65
           +DEHEL +I  AF  +Q Q+ L+L+L  ND +RI H     RH IRQL +FR+IH SDL 
Sbjct: 1   MDEHELASIVNAFIASQRQLLLMLELLKNDTKRITHIPYETRHRIRQLAYFRMIHGSDLV 60

Query: 66  CRESTRMDRRCFAILCTLLRTVAGLTGTEVVDVEEMVAIFLHILAHDVKNRVVRTQFARS 125
           CR+STRMDRRCFAILC LLRT+AGLT TEVVDVEEMVA+FLHILAHDVKNRV++ +F RS
Sbjct: 61  CRQSTRMDRRCFAILCHLLRTIAGLTSTEVVDVEEMVAMFLHILAHDVKNRVIQREFMRS 120

Query: 126 GETVSRHFNSVLHGVLR-HEVLIKNPEPITTSCTDPRWKWFQNCLGALDGTYVKVNVSVL 185
           GET+SRHFN VL  V+R HE L+K P+P+   CTD RW+WF+NCLGALDGTY+KVNV   
Sbjct: 121 GETISRHFNMVLLAVIRLHEELLKKPQPVPNECTDQRWRWFENCLGALDGTYIKVNVPAS 180

Query: 186 DRPRYRTRKGEIATNMFAVCDTEGDFTFVLPGWEGSAADSRVLRDAISRPNGLKVPKG-- 245
           DR RYRTRKGE+ATN+  VCDT+GDF +VL GWEGSAADSR+LRDA+SRPN LKVPKG  
Sbjct: 181 DRARYRTRKGEVATNVLGVCDTKGDFVYVLAGWEGSAADSRILRDALSRPNRLKVPKGYY 240

Query: 246 YLCDAGYPNAEGFLAPYRGERYHLSEWRGAGNAPTTPKEFFNMKHSSARNVIERAFGLLK 305
           YL DAGYPNAEGFLAPYRG+RYHL EWRG  NAP+T KEFFNMKHSSARNVIERAFG+LK
Sbjct: 241 YLVDAGYPNAEGFLAPYRGQRYHLQEWRGPENAPSTSKEFFNMKHSSARNVIERAFGVLK 300

Query: 306 GRWAILHSKSYYPVRIQGRTIAACCLLHNLINREMGDREIPDDLDEVDSASATTDSENIN 365
           GRWAIL  KSYYPV +Q RTI ACCLLHNLINREM + +I D++DEVDS  ATT +++I+
Sbjct: 301 GRWAILRGKSYYPVEVQCRTILACCLLHNLINREMTNFDIEDNIDEVDSTHATTAADDIH 360

Query: 366 FIETSDEWSRWRDDLAEHMFSEWELRN 390
           +IETS+EWS+WRD+LAE MF+EWELRN
Sbjct: 361 YIETSNEWSQWRDNLAEEMFTEWELRN 387

BLAST of Lcy05g016210 vs. ExPASy TrEMBL
Match: A0A5A7TXW1 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold298G00370 PE=3 SV=1)

HSP 1 Score: 586.3 bits (1510), Expect = 9.7e-164
Identity = 278/387 (71.83%), Postives = 325/387 (83.98%), Query Frame = 0

Query: 6   LDEHELVAIFTAFTTTQAQVFLLLDLYMNDHRRIEHQSPYLRHHIRQLTFFRLIHKSDLR 65
           +DEHEL +I  AF  +Q Q+ L+L+L  ND +RI H     RH IRQL +FR+IH SDL 
Sbjct: 1   MDEHELASIVNAFIASQRQLLLMLELLKNDTKRITHIPYETRHRIRQLAYFRMIHGSDLV 60

Query: 66  CRESTRMDRRCFAILCTLLRTVAGLTGTEVVDVEEMVAIFLHILAHDVKNRVVRTQFARS 125
           CR+STRMDRRCFAILC LLRT+AGLT TEVVDVEEMVA+FLHILAHDVKNRV++ +F RS
Sbjct: 61  CRQSTRMDRRCFAILCHLLRTIAGLTSTEVVDVEEMVAMFLHILAHDVKNRVIQREFMRS 120

Query: 126 GETVSRHFNSVLHGVLR-HEVLIKNPEPITTSCTDPRWKWFQNCLGALDGTYVKVNVSVL 185
           GET+SRHFN VL  V+R H+ L+K P+P+   CTD RW+WF+NCLGALDGTY+KVNV   
Sbjct: 121 GETISRHFNMVLLAVIRLHDELLKKPQPVPNECTDQRWRWFENCLGALDGTYIKVNVPAS 180

Query: 186 DRPRYRTRKGEIATNMFAVCDTEGDFTFVLPGWEGSAADSRVLRDAISRPNGLKVPKG-- 245
           DR RYRTRKGE+ATN+  VCDT+GDF +VL GWEGSAADSR+LRDA+SRPN LKVPKG  
Sbjct: 181 DRARYRTRKGEVATNVLGVCDTKGDFVYVLAGWEGSAADSRILRDALSRPNRLKVPKGYY 240

Query: 246 YLCDAGYPNAEGFLAPYRGERYHLSEWRGAGNAPTTPKEFFNMKHSSARNVIERAFGLLK 305
           YL DAGYPNAEGFLAPYRG+RYHL EWRG  NAP+T KEFFNMKHSSARNVIERAFG+LK
Sbjct: 241 YLVDAGYPNAEGFLAPYRGQRYHLQEWRGPENAPSTSKEFFNMKHSSARNVIERAFGVLK 300

Query: 306 GRWAILHSKSYYPVRIQGRTIAACCLLHNLINREMGDREIPDDLDEVDSASATTDSENIN 365
           GRWAIL  KSYYPV +Q RTI ACCLLHNLINREM + +I D++DEVDS  ATT +++I+
Sbjct: 301 GRWAILRGKSYYPVEVQCRTILACCLLHNLINREMTNFDIEDNIDEVDSTHATTAADDIH 360

Query: 366 FIETSDEWSRWRDDLAEHMFSEWELRN 390
           +IETS+EWS+WRD+LAE MF+EWELRN
Sbjct: 361 YIETSNEWSQWRDNLAEEMFTEWELRN 387

BLAST of Lcy05g016210 vs. ExPASy TrEMBL
Match: A0A5A7U476 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold264G00800 PE=3 SV=1)

HSP 1 Score: 583.2 bits (1502), Expect = 8.2e-163
Identity = 278/387 (71.83%), Postives = 323/387 (83.46%), Query Frame = 0

Query: 6   LDEHELVAIFTAFTTTQAQVFLLLDLYMNDHRRIEHQSPYLRHHIRQLTFFRLIHKSDLR 65
           +DEHEL +I  AF  +Q Q+ L+L+L  ND +RI H     RH IRQL +FR+IH SDL 
Sbjct: 1   MDEHELASIVNAFIASQRQLLLMLELLKNDTKRITHIPYETRHRIRQLAYFRMIHGSDLV 60

Query: 66  CRESTRMDRRCFAILCTLLRTVAGLTGTEVVDVEEMVAIFLHILAHDVKNRVVRTQFARS 125
           CR+STRMDRRCFAILC LLRT+AGLT TEVVDVEEMVA+FLHILAHDVKNRV++ +F RS
Sbjct: 61  CRQSTRMDRRCFAILCHLLRTIAGLTSTEVVDVEEMVAMFLHILAHDVKNRVIQREFMRS 120

Query: 126 GETVSRHFNSVLHGVLR-HEVLIKNPEPITTSCTDPRWKWFQNCLGALDGTYVKVNVSVL 185
           GET+SRHFN VL  V+R HE L+K P+P+   CTD RWKWF+NCLGALDGTY+KVNV   
Sbjct: 121 GETISRHFNMVLLAVIRLHEELLKKPQPVPNECTDQRWKWFENCLGALDGTYIKVNVPAS 180

Query: 186 DRPRYRTRKGEIATNMFAVCDTEGDFTFVLPGWEGSAADSRVLRDAISRPNGLKVPKG-- 245
           DR RYRTRKGE+ATN+  VCDT+GDF +VL GWEG AADSR+LRDA+SRPN LKVPKG  
Sbjct: 181 DRARYRTRKGEVATNVLGVCDTKGDFVYVLAGWEGLAADSRILRDALSRPNRLKVPKGYY 240

Query: 246 YLCDAGYPNAEGFLAPYRGERYHLSEWRGAGNAPTTPKEFFNMKHSSARNVIERAFGLLK 305
           YL DAGY NAEGFLAPYRG+RYHL EWRG  NAP+T KEFFNMKHSSARNVIERAFG+LK
Sbjct: 241 YLVDAGYQNAEGFLAPYRGQRYHLQEWRGPENAPSTSKEFFNMKHSSARNVIERAFGVLK 300

Query: 306 GRWAILHSKSYYPVRIQGRTIAACCLLHNLINREMGDREIPDDLDEVDSASATTDSENIN 365
           GRWAIL  KSYYPV +Q RTI ACCLLHNLINREM + +I D++DEVDS  ATT +++I+
Sbjct: 301 GRWAILRGKSYYPVEVQCRTILACCLLHNLINREMTNFDIEDNIDEVDSTHATTAADDIH 360

Query: 366 FIETSDEWSRWRDDLAEHMFSEWELRN 390
           +IETS+EWS+WRD+LAE MF+EWELRN
Sbjct: 361 YIETSNEWSQWRDNLAEEMFTEWELRN 387

BLAST of Lcy05g016210 vs. ExPASy TrEMBL
Match: A0A5A7U9H2 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold678G00110 PE=3 SV=1)

HSP 1 Score: 582.0 bits (1499), Expect = 1.8e-162
Identity = 276/387 (71.32%), Postives = 322/387 (83.20%), Query Frame = 0

Query: 6   LDEHELVAIFTAFTTTQAQVFLLLDLYMNDHRRIEHQSPYLRHHIRQLTFFRLIHKSDLR 65
           +DEHEL +I  AF  +Q Q+ L+L+L  ND +RI H     RH IRQL +FR+IH SDL 
Sbjct: 1   MDEHELASIVNAFIASQRQLLLMLELLKNDTKRITHIPYETRHRIRQLAYFRMIHGSDLV 60

Query: 66  CRESTRMDRRCFAILCTLLRTVAGLTGTEVVDVEEMVAIFLHILAHDVKNRVVRTQFARS 125
           C +STRMDRRCFAILC LLRT+AGLT TEVVDVEEMVA+FLHIL HDVKNRV++ +F RS
Sbjct: 61  CHQSTRMDRRCFAILCHLLRTIAGLTSTEVVDVEEMVAMFLHILVHDVKNRVIQREFMRS 120

Query: 126 GETVSRHFNSVLHGVLR-HEVLIKNPEPITTSCTDPRWKWFQNCLGALDGTYVKVNVSVL 185
           GET+SRHFN VL  V+R HE L+K P+P+   CTD RW+WF+NCLGALDGTY+KVNV   
Sbjct: 121 GETISRHFNMVLLAVIRLHEELLKKPQPVPNECTDQRWRWFENCLGALDGTYIKVNVPAS 180

Query: 186 DRPRYRTRKGEIATNMFAVCDTEGDFTFVLPGWEGSAADSRVLRDAISRPNGLKVPKG-- 245
           DR RYRTRKGE+ATN+  VCDT+GDF +VL GWEGSAADSR+LRDA+SRPN LKVPKG  
Sbjct: 181 DRARYRTRKGEVATNVLGVCDTKGDFVYVLAGWEGSAADSRILRDALSRPNRLKVPKGYY 240

Query: 246 YLCDAGYPNAEGFLAPYRGERYHLSEWRGAGNAPTTPKEFFNMKHSSARNVIERAFGLLK 305
           YL DAGYPNAEGFLAPYRG+RYHL EWRG  NAP+T KEFFNMKHS ARNVIERAFG+LK
Sbjct: 241 YLVDAGYPNAEGFLAPYRGQRYHLQEWRGPENAPSTSKEFFNMKHSFARNVIERAFGVLK 300

Query: 306 GRWAILHSKSYYPVRIQGRTIAACCLLHNLINREMGDREIPDDLDEVDSASATTDSENIN 365
           GRWAIL  KSYYPV +Q RTI ACCLLHNLINREM + +I D++DEVDS  ATT +++I+
Sbjct: 301 GRWAILRGKSYYPVEVQCRTILACCLLHNLINREMTNFDIEDNIDEVDSTHATTTADDIH 360

Query: 366 FIETSDEWSRWRDDLAEHMFSEWELRN 390
           +IETS+EWS+WRD+LAE MF+EWELRN
Sbjct: 361 YIETSNEWSQWRDNLAEEMFTEWELRN 387

BLAST of Lcy05g016210 vs. ExPASy TrEMBL
Match: A0A5A7TWH8 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold498G001380 PE=3 SV=1)

HSP 1 Score: 579.3 bits (1492), Expect = 1.2e-161
Identity = 276/387 (71.32%), Postives = 320/387 (82.69%), Query Frame = 0

Query: 6   LDEHELVAIFTAFTTTQAQVFLLLDLYMNDHRRIEHQSPYLRHHIRQLTFFRLIHKSDLR 65
           +DE EL +I  AF  +Q Q+ L+L+L  ND +RI H     RH IRQL +FR+IH SDL 
Sbjct: 1   MDEQELASIVNAFIASQRQLLLMLELLKNDTKRITHIPYETRHRIRQLAYFRMIHGSDLV 60

Query: 66  CRESTRMDRRCFAILCTLLRTVAGLTGTEVVDVEEMVAIFLHILAHDVKNRVVRTQFARS 125
           CRESTRMDRRCFAILC LLRT+AGLT TEVVDVEEMVA+FLHILAHDVKNRV++ +F RS
Sbjct: 61  CRESTRMDRRCFAILCHLLRTIAGLTSTEVVDVEEMVAMFLHILAHDVKNRVIQREFMRS 120

Query: 126 GETVSRHFNSVLHGVLR-HEVLIKNPEPITTSCTDPRWKWFQNCLGALDGTYVKVNVSVL 185
           GET+S HFN VL  V+R HE L+K P+P+   CTD RW+WF+NCLGALDGTY+KVNV   
Sbjct: 121 GETISCHFNMVLLAVIRLHEELLKKPQPVPNECTDQRWRWFENCLGALDGTYIKVNVPAS 180

Query: 186 DRPRYRTRKGEIATNMFAVCDTEGDFTFVLPGWEGSAADSRVLRDAISRPNGLKVPKG-- 245
           DR RYRTRKGE+ATN+  VCD +GDF +VL GWEGSAADSR+LRDA+SRPNGLKVPKG  
Sbjct: 181 DRARYRTRKGEVATNVLGVCDRKGDFVYVLAGWEGSAADSRILRDALSRPNGLKVPKGYY 240

Query: 246 YLCDAGYPNAEGFLAPYRGERYHLSEWRGAGNAPTTPKEFFNMKHSSARNVIERAFGLLK 305
           YL DAGYPN EGFLAPYRG+RYHL EW G  NAP+T KEFFNMKH SARNVIERAFG+LK
Sbjct: 241 YLVDAGYPNPEGFLAPYRGQRYHLQEWHGPENAPSTSKEFFNMKHPSARNVIERAFGVLK 300

Query: 306 GRWAILHSKSYYPVRIQGRTIAACCLLHNLINREMGDREIPDDLDEVDSASATTDSENIN 365
           GRWAIL  KSYYPV +Q RTI ACCLLHNLINREM + +I D++DEVDS  ATT +++I+
Sbjct: 301 GRWAILRGKSYYPVEVQCRTILACCLLHNLINREMTNFDIEDNIDEVDSTHATTAADDIH 360

Query: 366 FIETSDEWSRWRDDLAEHMFSEWELRN 390
           +IETS+EWS+WRDDLAE MF+EWELRN
Sbjct: 361 YIETSNEWSQWRDDLAEEMFTEWELRN 387

BLAST of Lcy05g016210 vs. NCBI nr
Match: KAA0035620.1 (retrotransposon protein [Cucumis melo var. makuwa] >KAA0038121.1 retrotransposon protein [Cucumis melo var. makuwa] >KAA0041646.1 retrotransposon protein [Cucumis melo var. makuwa] >KAA0047363.1 retrotransposon protein [Cucumis melo var. makuwa] >KAA0048378.1 retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 587.4 bits (1513), Expect = 9.0e-164
Identity = 279/387 (72.09%), Postives = 325/387 (83.98%), Query Frame = 0

Query: 6   LDEHELVAIFTAFTTTQAQVFLLLDLYMNDHRRIEHQSPYLRHHIRQLTFFRLIHKSDLR 65
           +DEHEL +I  AF  +Q Q+ L+L+L  ND +RI H     RH IRQL +FR+IH SDL 
Sbjct: 1   MDEHELASIVNAFIASQRQLLLMLELLKNDTKRITHIPYETRHRIRQLAYFRMIHGSDLV 60

Query: 66  CRESTRMDRRCFAILCTLLRTVAGLTGTEVVDVEEMVAIFLHILAHDVKNRVVRTQFARS 125
           CR+STRMDRRCFAILC LLRT+AGLT TEVVDVEEMVA+FLHILAHDVKNRV++ +F RS
Sbjct: 61  CRQSTRMDRRCFAILCHLLRTIAGLTSTEVVDVEEMVAMFLHILAHDVKNRVIQREFMRS 120

Query: 126 GETVSRHFNSVLHGVLR-HEVLIKNPEPITTSCTDPRWKWFQNCLGALDGTYVKVNVSVL 185
           GET+SRHFN VL  V+R HE L+K P+P+   CTD RW+WF+NCLGALDGTY+KVNV   
Sbjct: 121 GETISRHFNMVLLAVIRLHEELLKKPQPVPNECTDQRWRWFENCLGALDGTYIKVNVPAS 180

Query: 186 DRPRYRTRKGEIATNMFAVCDTEGDFTFVLPGWEGSAADSRVLRDAISRPNGLKVPKG-- 245
           DR RYRTRKGE+ATN+  VCDT+GDF +VL GWEGSAADSR+LRDA+SRPN LKVPKG  
Sbjct: 181 DRARYRTRKGEVATNVLGVCDTKGDFVYVLAGWEGSAADSRILRDALSRPNRLKVPKGYY 240

Query: 246 YLCDAGYPNAEGFLAPYRGERYHLSEWRGAGNAPTTPKEFFNMKHSSARNVIERAFGLLK 305
           YL DAGYPNAEGFLAPYRG+RYHL EWRG  NAP+T KEFFNMKHSSARNVIERAFG+LK
Sbjct: 241 YLVDAGYPNAEGFLAPYRGQRYHLQEWRGPENAPSTSKEFFNMKHSSARNVIERAFGVLK 300

Query: 306 GRWAILHSKSYYPVRIQGRTIAACCLLHNLINREMGDREIPDDLDEVDSASATTDSENIN 365
           GRWAIL  KSYYPV +Q RTI ACCLLHNLINREM + +I D++DEVDS  ATT +++I+
Sbjct: 301 GRWAILRGKSYYPVEVQCRTILACCLLHNLINREMTNFDIEDNIDEVDSTHATTAADDIH 360

Query: 366 FIETSDEWSRWRDDLAEHMFSEWELRN 390
           +IETS+EWS+WRD+LAE MF+EWELRN
Sbjct: 361 YIETSNEWSQWRDNLAEEMFTEWELRN 387

BLAST of Lcy05g016210 vs. NCBI nr
Match: KAA0046727.1 (retrotransposon protein [Cucumis melo var. makuwa] >KAA0052100.1 retrotransposon protein [Cucumis melo var. makuwa] >KAA0056032.1 retrotransposon protein [Cucumis melo var. makuwa] >KAA0059561.1 retrotransposon protein [Cucumis melo var. makuwa] >KAA0065497.1 retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 586.3 bits (1510), Expect = 2.0e-163
Identity = 278/387 (71.83%), Postives = 325/387 (83.98%), Query Frame = 0

Query: 6   LDEHELVAIFTAFTTTQAQVFLLLDLYMNDHRRIEHQSPYLRHHIRQLTFFRLIHKSDLR 65
           +DEHEL +I  AF  +Q Q+ L+L+L  ND +RI H     RH IRQL +FR+IH SDL 
Sbjct: 1   MDEHELASIVNAFIASQRQLLLMLELLKNDTKRITHIPYETRHRIRQLAYFRMIHGSDLV 60

Query: 66  CRESTRMDRRCFAILCTLLRTVAGLTGTEVVDVEEMVAIFLHILAHDVKNRVVRTQFARS 125
           CR+STRMDRRCFAILC LLRT+AGLT TEVVDVEEMVA+FLHILAHDVKNRV++ +F RS
Sbjct: 61  CRQSTRMDRRCFAILCHLLRTIAGLTSTEVVDVEEMVAMFLHILAHDVKNRVIQREFMRS 120

Query: 126 GETVSRHFNSVLHGVLR-HEVLIKNPEPITTSCTDPRWKWFQNCLGALDGTYVKVNVSVL 185
           GET+SRHFN VL  V+R H+ L+K P+P+   CTD RW+WF+NCLGALDGTY+KVNV   
Sbjct: 121 GETISRHFNMVLLAVIRLHDELLKKPQPVPNECTDQRWRWFENCLGALDGTYIKVNVPAS 180

Query: 186 DRPRYRTRKGEIATNMFAVCDTEGDFTFVLPGWEGSAADSRVLRDAISRPNGLKVPKG-- 245
           DR RYRTRKGE+ATN+  VCDT+GDF +VL GWEGSAADSR+LRDA+SRPN LKVPKG  
Sbjct: 181 DRARYRTRKGEVATNVLGVCDTKGDFVYVLAGWEGSAADSRILRDALSRPNRLKVPKGYY 240

Query: 246 YLCDAGYPNAEGFLAPYRGERYHLSEWRGAGNAPTTPKEFFNMKHSSARNVIERAFGLLK 305
           YL DAGYPNAEGFLAPYRG+RYHL EWRG  NAP+T KEFFNMKHSSARNVIERAFG+LK
Sbjct: 241 YLVDAGYPNAEGFLAPYRGQRYHLQEWRGPENAPSTSKEFFNMKHSSARNVIERAFGVLK 300

Query: 306 GRWAILHSKSYYPVRIQGRTIAACCLLHNLINREMGDREIPDDLDEVDSASATTDSENIN 365
           GRWAIL  KSYYPV +Q RTI ACCLLHNLINREM + +I D++DEVDS  ATT +++I+
Sbjct: 301 GRWAILRGKSYYPVEVQCRTILACCLLHNLINREMTNFDIEDNIDEVDSTHATTAADDIH 360

Query: 366 FIETSDEWSRWRDDLAEHMFSEWELRN 390
           +IETS+EWS+WRD+LAE MF+EWELRN
Sbjct: 361 YIETSNEWSQWRDNLAEEMFTEWELRN 387

BLAST of Lcy05g016210 vs. NCBI nr
Match: KAA0048361.1 (retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 583.2 bits (1502), Expect = 1.7e-162
Identity = 278/387 (71.83%), Postives = 323/387 (83.46%), Query Frame = 0

Query: 6   LDEHELVAIFTAFTTTQAQVFLLLDLYMNDHRRIEHQSPYLRHHIRQLTFFRLIHKSDLR 65
           +DEHEL +I  AF  +Q Q+ L+L+L  ND +RI H     RH IRQL +FR+IH SDL 
Sbjct: 1   MDEHELASIVNAFIASQRQLLLMLELLKNDTKRITHIPYETRHRIRQLAYFRMIHGSDLV 60

Query: 66  CRESTRMDRRCFAILCTLLRTVAGLTGTEVVDVEEMVAIFLHILAHDVKNRVVRTQFARS 125
           CR+STRMDRRCFAILC LLRT+AGLT TEVVDVEEMVA+FLHILAHDVKNRV++ +F RS
Sbjct: 61  CRQSTRMDRRCFAILCHLLRTIAGLTSTEVVDVEEMVAMFLHILAHDVKNRVIQREFMRS 120

Query: 126 GETVSRHFNSVLHGVLR-HEVLIKNPEPITTSCTDPRWKWFQNCLGALDGTYVKVNVSVL 185
           GET+SRHFN VL  V+R HE L+K P+P+   CTD RWKWF+NCLGALDGTY+KVNV   
Sbjct: 121 GETISRHFNMVLLAVIRLHEELLKKPQPVPNECTDQRWKWFENCLGALDGTYIKVNVPAS 180

Query: 186 DRPRYRTRKGEIATNMFAVCDTEGDFTFVLPGWEGSAADSRVLRDAISRPNGLKVPKG-- 245
           DR RYRTRKGE+ATN+  VCDT+GDF +VL GWEG AADSR+LRDA+SRPN LKVPKG  
Sbjct: 181 DRARYRTRKGEVATNVLGVCDTKGDFVYVLAGWEGLAADSRILRDALSRPNRLKVPKGYY 240

Query: 246 YLCDAGYPNAEGFLAPYRGERYHLSEWRGAGNAPTTPKEFFNMKHSSARNVIERAFGLLK 305
           YL DAGY NAEGFLAPYRG+RYHL EWRG  NAP+T KEFFNMKHSSARNVIERAFG+LK
Sbjct: 241 YLVDAGYQNAEGFLAPYRGQRYHLQEWRGPENAPSTSKEFFNMKHSSARNVIERAFGVLK 300

Query: 306 GRWAILHSKSYYPVRIQGRTIAACCLLHNLINREMGDREIPDDLDEVDSASATTDSENIN 365
           GRWAIL  KSYYPV +Q RTI ACCLLHNLINREM + +I D++DEVDS  ATT +++I+
Sbjct: 301 GRWAILRGKSYYPVEVQCRTILACCLLHNLINREMTNFDIEDNIDEVDSTHATTAADDIH 360

Query: 366 FIETSDEWSRWRDDLAEHMFSEWELRN 390
           +IETS+EWS+WRD+LAE MF+EWELRN
Sbjct: 361 YIETSNEWSQWRDNLAEEMFTEWELRN 387

BLAST of Lcy05g016210 vs. NCBI nr
Match: KAA0051057.1 (retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 582.0 bits (1499), Expect = 3.8e-162
Identity = 276/387 (71.32%), Postives = 322/387 (83.20%), Query Frame = 0

Query: 6   LDEHELVAIFTAFTTTQAQVFLLLDLYMNDHRRIEHQSPYLRHHIRQLTFFRLIHKSDLR 65
           +DEHEL +I  AF  +Q Q+ L+L+L  ND +RI H     RH IRQL +FR+IH SDL 
Sbjct: 1   MDEHELASIVNAFIASQRQLLLMLELLKNDTKRITHIPYETRHRIRQLAYFRMIHGSDLV 60

Query: 66  CRESTRMDRRCFAILCTLLRTVAGLTGTEVVDVEEMVAIFLHILAHDVKNRVVRTQFARS 125
           C +STRMDRRCFAILC LLRT+AGLT TEVVDVEEMVA+FLHIL HDVKNRV++ +F RS
Sbjct: 61  CHQSTRMDRRCFAILCHLLRTIAGLTSTEVVDVEEMVAMFLHILVHDVKNRVIQREFMRS 120

Query: 126 GETVSRHFNSVLHGVLR-HEVLIKNPEPITTSCTDPRWKWFQNCLGALDGTYVKVNVSVL 185
           GET+SRHFN VL  V+R HE L+K P+P+   CTD RW+WF+NCLGALDGTY+KVNV   
Sbjct: 121 GETISRHFNMVLLAVIRLHEELLKKPQPVPNECTDQRWRWFENCLGALDGTYIKVNVPAS 180

Query: 186 DRPRYRTRKGEIATNMFAVCDTEGDFTFVLPGWEGSAADSRVLRDAISRPNGLKVPKG-- 245
           DR RYRTRKGE+ATN+  VCDT+GDF +VL GWEGSAADSR+LRDA+SRPN LKVPKG  
Sbjct: 181 DRARYRTRKGEVATNVLGVCDTKGDFVYVLAGWEGSAADSRILRDALSRPNRLKVPKGYY 240

Query: 246 YLCDAGYPNAEGFLAPYRGERYHLSEWRGAGNAPTTPKEFFNMKHSSARNVIERAFGLLK 305
           YL DAGYPNAEGFLAPYRG+RYHL EWRG  NAP+T KEFFNMKHS ARNVIERAFG+LK
Sbjct: 241 YLVDAGYPNAEGFLAPYRGQRYHLQEWRGPENAPSTSKEFFNMKHSFARNVIERAFGVLK 300

Query: 306 GRWAILHSKSYYPVRIQGRTIAACCLLHNLINREMGDREIPDDLDEVDSASATTDSENIN 365
           GRWAIL  KSYYPV +Q RTI ACCLLHNLINREM + +I D++DEVDS  ATT +++I+
Sbjct: 301 GRWAILRGKSYYPVEVQCRTILACCLLHNLINREMTNFDIEDNIDEVDSTHATTTADDIH 360

Query: 366 FIETSDEWSRWRDDLAEHMFSEWELRN 390
           +IETS+EWS+WRD+LAE MF+EWELRN
Sbjct: 361 YIETSNEWSQWRDNLAEEMFTEWELRN 387

BLAST of Lcy05g016210 vs. NCBI nr
Match: KAA0047510.1 (retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 579.3 bits (1492), Expect = 2.4e-161
Identity = 276/387 (71.32%), Postives = 320/387 (82.69%), Query Frame = 0

Query: 6   LDEHELVAIFTAFTTTQAQVFLLLDLYMNDHRRIEHQSPYLRHHIRQLTFFRLIHKSDLR 65
           +DE EL +I  AF  +Q Q+ L+L+L  ND +RI H     RH IRQL +FR+IH SDL 
Sbjct: 1   MDEQELASIVNAFIASQRQLLLMLELLKNDTKRITHIPYETRHRIRQLAYFRMIHGSDLV 60

Query: 66  CRESTRMDRRCFAILCTLLRTVAGLTGTEVVDVEEMVAIFLHILAHDVKNRVVRTQFARS 125
           CRESTRMDRRCFAILC LLRT+AGLT TEVVDVEEMVA+FLHILAHDVKNRV++ +F RS
Sbjct: 61  CRESTRMDRRCFAILCHLLRTIAGLTSTEVVDVEEMVAMFLHILAHDVKNRVIQREFMRS 120

Query: 126 GETVSRHFNSVLHGVLR-HEVLIKNPEPITTSCTDPRWKWFQNCLGALDGTYVKVNVSVL 185
           GET+S HFN VL  V+R HE L+K P+P+   CTD RW+WF+NCLGALDGTY+KVNV   
Sbjct: 121 GETISCHFNMVLLAVIRLHEELLKKPQPVPNECTDQRWRWFENCLGALDGTYIKVNVPAS 180

Query: 186 DRPRYRTRKGEIATNMFAVCDTEGDFTFVLPGWEGSAADSRVLRDAISRPNGLKVPKG-- 245
           DR RYRTRKGE+ATN+  VCD +GDF +VL GWEGSAADSR+LRDA+SRPNGLKVPKG  
Sbjct: 181 DRARYRTRKGEVATNVLGVCDRKGDFVYVLAGWEGSAADSRILRDALSRPNGLKVPKGYY 240

Query: 246 YLCDAGYPNAEGFLAPYRGERYHLSEWRGAGNAPTTPKEFFNMKHSSARNVIERAFGLLK 305
           YL DAGYPN EGFLAPYRG+RYHL EW G  NAP+T KEFFNMKH SARNVIERAFG+LK
Sbjct: 241 YLVDAGYPNPEGFLAPYRGQRYHLQEWHGPENAPSTSKEFFNMKHPSARNVIERAFGVLK 300

Query: 306 GRWAILHSKSYYPVRIQGRTIAACCLLHNLINREMGDREIPDDLDEVDSASATTDSENIN 365
           GRWAIL  KSYYPV +Q RTI ACCLLHNLINREM + +I D++DEVDS  ATT +++I+
Sbjct: 301 GRWAILRGKSYYPVEVQCRTILACCLLHNLINREMTNFDIEDNIDEVDSTHATTAADDIH 360

Query: 366 FIETSDEWSRWRDDLAEHMFSEWELRN 390
           +IETS+EWS+WRDDLAE MF+EWELRN
Sbjct: 361 YIETSNEWSQWRDDLAEEMFTEWELRN 387

BLAST of Lcy05g016210 vs. TAIR 10
Match: AT5G41980.1 (CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (InterPro:IPR006912); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G43722.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 192.6 bits (488), Expect = 6.0e-49
Identity = 111/308 (36.04%), Postives = 167/308 (54.22%), Query Frame = 0

Query: 56  FRLIHKSDLRCRESTRMDRRCFAILCTLLRTVAGLTGTEVVDVEEMVAIFLHILAHDVKN 115
           +++++  + +C E+ RMD+  F  LC LL+T   L  T  + +E  +AIFL I+ H+++ 
Sbjct: 32  YQILNGPNEQCFENFRMDKPVFYKLCDLLQTRGLLRHTNRIKIEAQLAIFLFIIGHNLRT 91

Query: 116 RVVRTQFARSGETVSRHFNSVLHGV--LRHEVLIKNPEPITTSCTDPRWKWFQNCLGALD 175
           R V+  F  SGET+SRHFN+VL+ V  +  +    N    T    DP   +F++C+G +D
Sbjct: 92  RAVQELFCYSGETISRHFNNVLNAVIAISKDFFQPNSNSDTLENDDP---YFKDCVGVVD 151

Query: 176 GTYVKVNVSVLDRPRYRTRKGEIATNMFAVCDTEGDFTFVLPGWEGSAADSRVLRDAISR 235
             ++ V V V ++  +R   G +  N+ A    +  F +VL GWEGSA+D +VL  A++R
Sbjct: 152 SFHIPVMVGVDEQGPFRNGNGLLTQNVLAASSFDLRFNYVLAGWEGSASDQQVLNAALTR 211

Query: 236 PNGLKVPKG--YLCDAGYPNAEGFLAPYRGERYHLSEWRGAGNAPTTPKEFFNMKHSSAR 295
            N L+VP+G  Y+ D  YPN  GF+APY G          + N+    KE FN +H    
Sbjct: 212 RNKLQVPQGKYYIVDNKYPNLPGFIAPYHGV---------STNSREEAKEMFNERHKLLH 271

Query: 296 NVIERAFGLLKGRWAILHSKSYYPVRIQGRTIAACCLLHNLINREMGDREIPDDLDEVDS 355
             I R FG LK R+ IL S   YP++ Q + + A C LHN +  E  D  +    +E   
Sbjct: 272 RAIHRTFGALKERFPILLSAPPYPLQTQVKLVIAACALHNYVRLEKPDDLVFRMFEEETL 327

Query: 356 ASATTDSE 360
           A A  D E
Sbjct: 332 AEAGEDRE 327

BLAST of Lcy05g016210 vs. TAIR 10
Match: AT1G43722.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G28730.1); Has 924 Blast hits to 912 proteins in 109 species: Archae - 0; Bacteria - 0; Metazoa - 222; Fungi - 31; Plants - 661; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). )

HSP 1 Score: 144.4 bits (363), Expect = 1.9e-34
Identity = 94/268 (35.07%), Postives = 133/268 (49.63%), Query Frame = 0

Query: 56  FRLIHKSDLRCRESTRMDRRCFAILCTLLRTVAGLTGTEVVDVEEMVAIFLHILAHDVKN 115
           +R + +    C +  RM   CF  LC +L+T   L  T  + +EE VA+FL I  H+   
Sbjct: 56  WRRLQQDAAACLQLLRMSLPCFTTLCNMLQTNYDLQPTLNISIEESVAMFLRICGHNEVY 115

Query: 116 RVVRTQFARSGETVSRHFNSVLHG----------VLRHEVLIKNPEPITTSCTDPR-WKW 175
           R V  +F R+ ETV R F  VL                + L + PE +     D R W +
Sbjct: 116 RDVGLRFGRNQETVQRKFREVLTATELLACDYIRTPTRQELYRIPERLQ---VDQRYWPY 175

Query: 176 FQNCLGALDGTYVKVNVSVLDRPRYRTRKGEIATNMFAVCDTEGDFTFVLPGWEGSAADS 235
           F   +GA+DGT+V V V    +  Y  R    + N+ A+CD +  FT++  G  GS  D+
Sbjct: 176 FSGFVGAMDGTHVCVKVKPDLQGMYWNRHDNASLNIMAICDLKMLFTYIWNGAPGSCYDT 235

Query: 236 RVLRDAISRPNGLKVP---KGYLCDAGYPNAEGFLAPYRGE-----RYHLSEWRGAGNAP 295
            VL+ A    +   +P   K YL D+GYPN +G LAPYR       RYH+S++   G  P
Sbjct: 236 AVLQIAQQSDSEFPLPPSEKYYLVDSGYPNKQGLLAPYRSSRNRVVRYHMSQFY-YGPRP 295

Query: 296 TTPKEFFNMKHSSARNVIERAFGLLKGR 305
               E FN  H+S R+VIER F + K +
Sbjct: 296 RNKHELFNQCHTSLRSVIERTFRIWKNK 319

BLAST of Lcy05g016210 vs. TAIR 10
Match: AT5G35695.1 (CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (InterPro:IPR006912); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G41980.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 132.1 bits (331), Expect = 9.6e-31
Identity = 78/210 (37.14%), Postives = 109/210 (51.90%), Query Frame = 0

Query: 188 RYRTRKGEIATNMFAVCDTEGDFTFVLPGWEGSAADSRVLRDAISRPNGLKVPKGYLCDA 247
           R  +RK  +  + FA       F +VL GWEGSA DSRVL DA+         K YL D 
Sbjct: 3   RDTSRKANMEMSSFAWGYATWIFIYVLSGWEGSAHDSRVLSDALR--------KFYLVDC 62

Query: 248 GYPNAEGFLAPYRGERYHLSEWRGAGNAPTTPKEFFNMKHSSARNVIERAFGLLKGRWAI 307
           G+ N   FLAP+RG RYHL E+ G    P TP E FN++H S RNVIER FG+ K R+AI
Sbjct: 63  GFANRLNFLAPFRGVRYHLQEFAGQRRDPETPHELFNLRHVSLRNVIERIFGIFKSRFAI 122

Query: 308 LHSKSYYPVRIQGRTIAACCLLHNLINRE--MGDREIPDDL-DEVDSASATTDSENINFI 367
             S   +  + Q   +  C  LHN + +E    + + PD++ +E D  +   ++ N N I
Sbjct: 123 FKSAPPFSYKKQAGLVLTCAALHNFLRKECRSDEADFPDEVGNEGDVVNNEGNAMNTNEI 182

Query: 368 ETS----------DEWSRWRDDLAEHMFSE 385
           +            +  + WR  +AE M+ +
Sbjct: 183 DNEEPLEAQKQDRENTNMWRKSMAEDMWKD 204

BLAST of Lcy05g016210 vs. TAIR 10
Match: AT5G28730.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G43722.1); Has 496 Blast hits to 496 proteins in 68 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 23; Plants - 470; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 91.7 bits (226), Expect = 1.4e-18
Identity = 67/207 (32.37%), Postives = 96/207 (46.38%), Query Frame = 0

Query: 59  IHKSDLRCRESTRMDRRCFAILCTLLRTVAGLTGTEVVDVEEMVAIFLHILAHDVKNRVV 118
           I+ +++ C+   RM    F  LC +L    GL  +  + ++E VAIFL I A +   R +
Sbjct: 17  IYSNEVSCQTLIRMSSEAFTQLCEILHGKYGLQSSTNISLDESVAIFLIICASNDTQRDI 76

Query: 119 RTQFARSGETVSRHFNSVLHGVLRHEVLIKNPEPITTSCTDPRWKWFQNCLGALDGTYVK 178
             +F  + ET+ R F+ VL  + R  V    P  +         +   N L   D  Y  
Sbjct: 77  ALRFGHAQETIWRKFHDVLKAMERLAVEYIRPRKV------EELRAISNRLQD-DTRYWP 136

Query: 179 VNVSVLDRPRYRTRKGEIATNMFAVCDTEGDFTFVLPGWEGSAADSRVLRDAISRPNGLK 238
             + +L         G  + N+ A+CD +  FT+   G  GS  D+RVL  AIS      
Sbjct: 137 FLMDLL---------GIASFNVLAICDLDMLFTYCFVGMAGSTHDARVLSAAISDDPLFH 196

Query: 239 VP---KGYLCDAGYPNAEGFLAPYRGE 263
           VP   K YL D+GY N  G+LAPYR E
Sbjct: 197 VPPDSKYYLVDSGYANKRGYLAPYRRE 207

BLAST of Lcy05g016210 vs. TAIR 10
Match: AT5G28950.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G41980.1); Has 448 Blast hits to 446 proteins in 74 species: Archae - 0; Bacteria - 0; Metazoa - 31; Fungi - 21; Plants - 396; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 86.7 bits (213), Expect = 4.6e-17
Identity = 43/115 (37.39%), Postives = 69/115 (60.00%), Query Frame = 0

Query: 162 WKWFQNCLGALDGTYVKVNVSVLDRPRYRTRKGEIATNMFAVCDTEGDFTFVLPGWEGSA 221
           + +F++C+GA+D T++   VS    P +R RKG+I+ NM A C+ + +F +VL GWEGSA
Sbjct: 19  YPYFKDCVGAIDDTHIFAMVSQKKMPSFRNRKGDISQNMLAACNFDVEFMYVLSGWEGSA 78

Query: 222 ADSRVLRDAISR-PNGLKVPK-----GYLCDAGYPNAEGFLAPYRGERYHLSEWR 271
            DS+VL DA++R  N L VP+       + +    N +  L     +R + ++WR
Sbjct: 79  HDSKVLNDALTRNSNRLPVPEEDESAEEVVEEVNDNNDEVLTTQDQQREYANQWR 133

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5D3BDX04.3e-16472.09Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7TXW19.7e-16471.83Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7U4768.2e-16371.83Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5A7U9H21.8e-16271.32Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5A7TWH81.2e-16171.32Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
Match NameE-valueIdentityDescription
KAA0035620.19.0e-16472.09retrotransposon protein [Cucumis melo var. makuwa] >KAA0038121.1 retrotransposon... [more]
KAA0046727.12.0e-16371.83retrotransposon protein [Cucumis melo var. makuwa] >KAA0052100.1 retrotransposon... [more]
KAA0048361.11.7e-16271.83retrotransposon protein [Cucumis melo var. makuwa][more]
KAA0051057.13.8e-16271.32retrotransposon protein [Cucumis melo var. makuwa][more]
KAA0047510.12.4e-16171.32retrotransposon protein [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
AT5G41980.16.0e-4936.04CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (Int... [more]
AT1G43722.11.9e-3435.07unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT5G35695.19.6e-3137.14CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (Int... [more]
AT5G28730.11.4e-1832.37unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT5G28950.14.6e-1737.39unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR027806Harbinger transposase-derived nuclease domainPFAMPF13359DDE_Tnp_4coord: 172..331
e-value: 4.9E-22
score: 78.3
NoneNo IPR availablePANTHERPTHR22930:SF211NUCLEASE HARBI1-RELATEDcoord: 35..386
NoneNo IPR availablePANTHERPTHR22930UNCHARACTERIZEDcoord: 35..386

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lcy05g016210.1Lcy05g016210.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0046872 metal ion binding