Lcy05g016200 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy05g016200
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase
Location	Chr05: 22066091 .. 22078218 (-)
RNA-Seq Expression	Lcy05g016200
Synteny	Lcy05g016200

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAGAACTCTACCATGGACGATCGAAAATGATGATTGATTAACTCCGCCAGTTCTCTTCCCATCCACAGCCTCTCAAATGGGCTTTCACGTTCTCAGAGCCCCTCCGTTCTCTTCCTCCACAACCATAATCTTCAAACCCACTTCTTCCGCTTCGTTTCTCTTCAAATTTGGTTATGCTCTCTACTCTTCACCTTTCTCCAAATCTTCTTCCTCCACTAGGACCTATTTCCGAGCTTCTTCAGCCAAATATGTTGCTTCTCCCGCCACCGCGATTCCGCTTTCTGGGTCTTTTTCTCGGAGAACTCGTAGTTTTCGTGGTGGGTTTATTGCAGCTACAGCTGCACCTGGCTCGGTCCACAAATCCGAGGAATTGAGGCCTTCCATTTCGCCTGAGCCATCTTGGGTTCAGAGGCAAAACGGGACTGAGTAAGACTGCAAATGCTTACTCGCATTTTCTTCTGTTCGTTTATATTATTTTCCTTCTGAAATTTTGAAGCGGCATAGTATTTATATGTAATATATATTATGTGTATGCTGTAATTGGAAGGCCTAGAAGCTTTGCTTCAAAAGGTTTATGTTGTTAGATGCAGAAATTTGGAGTTTGATAAGCTGCTTAAGTGTAATTGAAGTGTCGATCATTATTTATATCTAGGCGGACATTGTGTTTCACTCTGATAACCCATTTTGAAATTTATGCCGTTAACTTGGTATAATTCTGATGTACAAATTTAGGCTGTTTAAGACATTAAGTTCTATCAACTTGTTAGTTTATCCATATTGTCTCCTGGTGCTGGCTGGTAGTGGTAGTTGAAGGGCTTTGTCTAATTTATGGCTGAAGTTAATAAGGACCTAATCGTTGTACAATCCCTCAGATGCTTCTATGTTACATCATGAATTGTTGTTTTCCAATTTAGTTGCTCTTTTCTACTAATGCCAGGGGCCAGTAGGCTATATTGGATGCCCACAATTATTAAGATACCTCTGCCAATGTATGGTTTGTCAACTATACTATGGAGGGCCGAAAATCTTCCATCTAGTTTGGCGGCAACCTGTGAGAAAAAAAAGGATCATTGAGTGTTTTACTTTATTATGGTGTTTGCCAAAGTGACTTTAGGATTAAGTTGGGAGGTTGTGATGACCAATGTGGGGAGGATTTGTTTTTTGGTAAGAAATTGTGCTTTCATTGAGAAAAATGAAAGAAGACAAGGACATACAAAAAACAAACCTGGACAAAAGGAGACCAAAACAAACTACAGAATGGAACTTCAATCCAAAAGGACAAGACCAAGATCATAATTATAAAAAAGGCAAGTGATCAAGGCCCAAAGGGAGGTGTTAAACCTAGCCACCCCACCTCCCACACCTATCATCCAATCTCTCTACCTCTCTAAAAATTCCTTTGTTCTTTTTCAACTAAATACCTCACAAAATAGCAAAGAAGCTAGCTTACATAGGACTTTACCCCTCTCCCTAAAAGGGGGATTCAAAAGCGCCAACACTTAACCTAGTACATCTATGAGAATGGTATATATAGACATGGAAGCTGAATATGATTGTATCTATCATGGGATGAATGGGGGTCTTGTCTTGCTTCATTTCTTTGCCTCACAGTTACCAACACCAAACCTTCCATTTTCATGAGCCGAAGGTACCATTTTCAAACTTGGCAGTTTCCCAATAACATTACCTTACCATTGAAGAAGCACAGACTCCATCTTCTAGGACTTGGGATCTCAATTGCCGCAAATACTTTAAAGACGAAGAGATTATAGAATGGGCCTCTCTCCCACCTATTCTCTTCAATCATCTAGCAGATCCGACAATCGAGAATGGCGTTTGGAGTCCTCCAAATTCTTTTTGGTGGGATTTCTCTCTACCTTCCTTAGCAAAAATTATGGTACCAAGTCCTCTAATAGGGTCGGCTGTTTACTAATTGGAACTGGTTTTTGCTCATTGACATGATTGTATGAGATCAGAATTTACCCAACTTGATCATCGGGGGTCAGCAAGGATTGGGACCTGGATGTGATTGCTCACACATTTTGTGCAATCTCTTCTCATTTAGTAGTGGCCAATATCTCTGGCATATTTTCCATTCTTGTTTAGAGTCTTCTAGAACTACAAAATGGTTCAGGAAAACAAGCGAATAGAAGGCTTTCATTGAAGGTTAATATTATTGAAGATTTTAACATAGTTGACTCTTTGAATGGTACAGGAGCTCTTCTTTCTTTGGTAGCAGTCGCTGCCCTTGGTTTAGAAATAAAGGTGTTTGGAATAACTTTTGAAAAAAAATGTTTTTAAATAAAATTACTTTTTCTATACTCACCTTTGAAAAAATTACTAATTTAATATGTATTTAGTTTGGACGATCTCGGTAGGATGATCTCTAAAGGGGTGGAGGGAGGGATTATCGAGGGTTTCAAGGTGGGTAAGGAAGGATCTTCTTTGTCTCATCTTTAGTTTGTTGATGATACAATATTCTTCTGTTTGCGCAAGTAGGAGTCTTTCCTACTCTTGAATCATATGCTAGTATTCTTTGAGATGATTTATGGGCTAAACATTAATAGAAGGAAATGTCAGGTGTTGGGGGTTGAACTGTGAGCGTTCCAAGGTGGGTATGATGGCTTCTTTGGTGGGGTGCAATGTGGGTGATTTTCCGCTGACCTAGTCTTCCCCTTGGTCATAACCCTAGGAATCTCTCTTTTTGGAGTCCAGTGGAGGATAAAGTGAGAAGAAGATTGGCCTCCTTGAAGAAGAGCTTCTTCTCTAAGGTGGTCAACTCTTATTCGTTTGGTGTTGAGTGAGATTCTGACTTATTTCTTTTCCTTGTTTAGAGCTCCTTAGGCAGTGTGTAAGAGATAAGTGGGTGGGGGATAGGCCTCTCTGCATCACGTTTCCTCGTCTTTTCGTTTATCCTCCATGAAAAATCGATCGGTGTCAGATGTCTTGTTTCACTCAGAGAGCTCCCCTCTGTTTTTGTTTGGGTTCCATCAGCTTTGTCTGATAGGAAAACGACAAATGTTACGTCTCTTTAGTCTTTGATCGAGGAGTTTGAGTTCAAACTGGGAAGGAGAGATATCCAATGTTGGAGCCTTAGTCTTTCTAATGGGTTTTCTTGTAGTTCTTTTTTTTTCGGTGGTTGTTGCATTCGTCCCCCAAGGCGAGTCTATCTTCTGCTTTTGTGGGAGGTGAGTGTCGAAGAAGATTAGGTTCTTTATGTGGCAAGTTATCCATGGTAGAGTTTTTTTTTTCTTTGATAAGAAACAATTTCATTGATGTATGAAATTTACAAAAGGGATACATGATCCATAGAGATTATAAAAGACTTTCCCAACTATTTAAAAGGGAAGCATATGTGTACGAAGCAAGGAGGGGAGAGAGTTTACACCAAGAGATAGCATAGTATATAACAATGTCAAAAAAACCATCAAAAGAGAGATCTAATCCTTGGAAAACTCTTCTATTTCTTTCTTTCCATAAGATCCAAAAGAAAGCTCTAACGATGTTCATCCATAGAAGGCCTTTGATATTGGTGAAAGGATGTCCCAACATAACGGAGGCAAGGATATCCACCATATTACACGGAAGAGACATGGACCACCCAAAAGATTTAGTGATCCTACTCCAGAACTGCCAAGCAAAGGGGCCAGAAGCAAAAATGTGAGCCTGCGATTCATCACTAGATCTATAAAAATAACACCATCCAGGGGAGAGGGACAAGTAAGGCAGGCATCTCTGAAGAACCTCCTTGGTGTTGATGGCCTTGTGGGCTAATTCCCAGAGAAAGAATATGATTTTCTTTGGGTAGTTGTCTCTCCAAATAATCTTTGCCAAAGATGGCTCAATGAGACTAATATTTCCCATCATGTCAGAGAGGAGAGATTTAGTGGAAAAATAACCATTTTGATTGAGGGGCCATTTCCATTTGTCTTTAGAATGAGATAAGGAAATGGGGTCAAGATCCATGCTCAAATCAGCCCATTCATCCACTTCCAAATCTTTCAAATTTCTCCCCAGTTTGAGGTCCCAAAAATTTAAAGATTCATTCCATGCTCCTTTGACCGTGACTGTCTTGCAATGAGAGAGGCGATAGAGAAGGGGATATTTCGTGGCCAAAGGGGTGTTGTTGATCCAAGGGTCCGTCCAAAAAAAGGTCTCCTCTCCATTGCCAAGCTGGTGGACAATGCGACTAGATATAAGGCTATGATGCTTCAAAATATTCTTCCAGGGACCCTTTGATTTAGCAAGGGAAGCCTTGCTTACATTGGTGGGGGCTCCCTGCGATAGGCTTTTGAGAAGGATGCCTTCCCCGGTTCGCCCGTTTTGTTGCATTCTTTGTCAGAAGGTGGAGGAAGATCTGGACTAGATCACGTTCTTTGGAGCTGTGAATTTGCTGCTGTGAATTTGCTCGTCTGTTTGGAGTCGTTTCTTTAAGAGGTTTTGGTTGCAGAGGACAAGTTATTCGGATCATAGAGAGATGATTAAGGAGTTCCTCCTCCATTCATCGAGTTGCGAGAAGGGGAGATTTTGTGGCAAGTTGGGATGTGTGCGTTGTTATGAAGTCTGTAGGGGGAAAAAATAATGGAGTGATTGGGGGGTTGGATAGGGGCCCAAATGATGTTTGGTCCCTTACTAGGTTCCATGTATCTATTTGGGCATTGGTTTCAAAGTTTTTTTGTAATTACCCGTTGGGTCTTATCTTGCTTGATTGGGGTCATTTTCTTTAACTGCACTCCCTTTTGTGGGCTTGTTTTTTGTATGCCCTTGTATTCTTTCATTCGTTCTCAATGAAAGTTGACTTTTTATAAAAAAAAGGGTGTTTAGTTTGACTTCTTGAATGACTTTAGATGATCAAAAGTGTTTCTTAAAAAATCTTAATAAATAAATAACATTTTAAAAATGGATTAATTTTAAAAATCTTCTTGAAAAACACTTCAAGAGATGAATTATAAAAAAAAAAGTGACTTTAAAGTAATTGGCCAAAAGTCTTCAAAAGATGAATAAAAAACACAGCATATTTATAATTTGTAGAATCACTTTTGAACATAGTGCAACCAAACAAATTTGCTATTTAAAGTACTTTTTCAACAATGTAAGATACAAAAGCATTTTTATTAAAAAATATTTTAAGAAGTGCTTAAACTGGAAGGTATACCAAGCACACCCTTAATCTCATTATTTCAATTGGTAGTTATATTTCCAAATACCTATATTTGGGGTGAAAGGTTGATGAGGGGGCTGTTGAGGGGAAAGGTCTCTGGAGGTGGTGTTTATGCTGTTTGACCTTGGGGAGTTAGCCATAGGTAATGTAAGGGTGAGAACCAAGGTCCTGATGTCTAAATGGCTATGACCATTCCATCATGAATCTATCTGTGGCCATTCCATCGTGAATCTGACACCTTATGGCATAAGGTCATTGTAAGCAAATACGGTCCTCACCCTTTTGAATGGACTAGTGGGATTAGAGGCACTTCTAGAAATCCTTGGAAAGATATTTTGGTTGAGGTTCCTTTTCTTTCTTAGTTTGTTTAGTGGTTGTGGGAGATGGGAGATCGGAGATGTACTTACTTTTGGGAGGGGAAGGGAGATGTACTTACTTTTGAGAGGAGAGGTGTTGGGAGATAGACCCCTCTATTTTATGTTTCTTGTTTATATTGCCTATTTTATTTGATGAATCATTTGGTAGCTATGATCCTTTCTCATTATGAAAGCTCTCTTTCTCCTTCATTTGGTTTCTTCATCCTTGACCGATAGGGAAACAACAAATATTTTGGCTTTGTTATCTTTGCTTTGAGAGTTTCGTTTTAGCCCTATTGTCTGTTCGCCTTTGGAGTCATAGTCCATCCAAAGGCTTTTCTTGTGGTTCCTTCTTTCAACATTTGATCAATTCCTCCCCATCAAGTGGTTCTATTTTTTCCTCTATGTGGAAGGTGAAGATTCCCAAGAAGGTTAAGTTCTTTGTGTAGCAGGTGGTGCATGAAAGAGTCAACACCTTGGATCGAATCTTGGGCAAAGGGTCTAACTTGTTTGGGTCACTTTGTTGTATTCTTTGTAGAAGGGTAGCTGAGGATCTCGATCCTCTTATTTGGAGATGTGATTTTGTAGGTGATGTTTGGAGTTGTTTCTTTGAGGCCTTTGACTTTTGCTTTGTTAGGCCTACTTCTTCTCCATTTGTCTCTTCGTGAGAGAGGGTTGTTTTTTGGCAGGCTAGGATTTGTGCTACTTTGTGGGATCTTTGGAGTGAGAGAAATAATAGAATTTTTAGGGGTAGGAGAGATCTTCTATTGATAATTGGTCTCTTGTTAGATTCTATGTTTCTCCTCAAGAGTTTCAGTGACGTGGTTGGCTTTTTTTTTTTTTAAAAAAAATTACTCTCAAGGTCTTATTTTACTTGATTGGAGCCACTTTTTATGTTTGTCTCCCTTTTGTAAGCTCTATTTTTGCATGCCTTGTATTCATTCTTTTTTTTTTTTCAGAATAAAACTTGGTTCTTTATAAAATATGTATATGTGTGTGTATGTATATATTAGATTTTGGGAAGTCCTAGGATTGACAATGGGTTTTCTTGCACATCATTATTTCCCCTTGATAGAGAAACGAATAACTTGCCTCCCCTTCGTGATGTGAACTGTAAACTCTGAATATTAGAAAATTGAAGTTGATTAAGTCTGAGGTTTTCTTGCACATCATTATCTATCTCTTCACCTCTTTAATAGCAGGACTAATGTTCCTTTGGATTTGGCCAAGATTATTTGGTTCTAAGAAGCTCGGACACTCTATTTTAGGCCAAGTGTCTGTGTTGGACATGTGTTGGATACAGATTCGTCTATACATGCACTGGACACGTGTTTGACACACAAAAAAACATGCCCAATATTTTATCATTATTTTTTTCTCTTGGACACGTCTGAGACACGTTTGGGATACACTTGAAAATTGAAAGTCATTCTCAAAAAGATTAAAAGATAAGCCCATTAAGCCCAACATAAAAAGAAAAAAAAAACGCACAAACTTTTAAATAGGAAGCGTGGAAAGTAAAAACCATCTTAAGGGATGGTGGGTGGGGGTTTGAAATCCATCGCCCACTTTGCCAACCGCAGGAGACCAACTTCACCACCACTCATTTTGTCACCAACTATTGCAACTGCAAGGTTTGGTCTCTCTTTTTCTTTTTTCTTTTTAAAAAAAAAACTTCACAAAAAATGCAAGGTAAAGAAGACCTATAATTCTAATCTTTTCAACAAATCATATATATTTGTATCATTTATGTCATTAGAAGACATCTTCAATCTCTAAACATAACCATAGCTAATAAAATCCTTTGAGCTTTAGTAATGTTGAAAATAAATCAATATATACATATATTCCATTAAAAAAAAGTGTCCCCGACTGTCCGTGTCCTACTTTTTTAGAAATTAATGTGTCGCTGTATCTCTTAGATTTGGATAGGAACCATTTCAGAGAAAGTTAAATTCTTTTTTTGGACTCCAGCTTTTCAAAGCATCGATGATTGTGATAGAATTAACGCTGTTAATTTCAAAATAAAATGGGTCCTCATTGGCCTGTTGATGTAGGAAGATTGGGGGGATCTTTTCTCACTTCTCTTTCTCTAGTAATTGGTATATTTTCAGCAGTTTGACAACGTTTTTGTAGACAAAGGGTGTGGGGGACCCTTTGGTTCAATCATATGAAGGTTTTATGTAGTACAAATTGGTTGCATAGGAATGTGACAATATCCTAAGGAATTTAAAGTGTTTATTTGGGAGGTCTTGGAGCATATGCGTTGTAGTTGTAGCCTTAAATTGGGGCATTCTAGCTAGGGACTTTTGTATCTACAATTATAATTAATGTCATGCCTCTTGTGAATACTTTTTGTAATCTCTTTTGGCTTTAACGGCTCATTTTTTTTTTCTCTATTCTGTATCTTTTATAATGAATGTCAATACTTCCCCGCTCCCCTAGGAGAAGGAAAAAAAAAAGTGAGAAAAAGATAATATCTGATGAATCTTGTCTGTCTCCAGTAATACAATATTGAGAATCATGTGCCAAATCTGAATGTTCCTTTTATTCTTTTCCTTGATCAGATCATTACCAGCATCTGAAGTGCCTTTAAGAGGTCGTATTTATCATGAAACTTATGGGTGTCAAATGAATATTAATGATATGGAGGTTGTTCTATCAATCATGAAAAATGCTGGATACAGTGAAACCGTTGACATTCCCGAGACTGCAGAGATCATTTTTATCAACACTTGTGCTATCAGGGACAATGCTGAACAGAAGGTGTGGCAAAGACTTAATTACTTTTGGTTTCTGAAGAGACATTGGAAAAGCAATGTTGCTATTGGAAGGTCACAGTCTCGGCACCCTCCAAAAGTAGTTGTCTTGGGGTGCATGGCTGAGAGGTTGAAAGATAAAATACTAGATGCAGACAAGATGGTTGATGTGGTTTGTGGACCTGATGCTTACAGAGACCTGCCGCGATTATTGGATGAAGTAGATTATGGTCAAAAGGGAATAAACACACTTCTTTCCCTCGAAGAAACTTATGCTGATATAAGTCCAGTACGAATATCCAAAAATTCAGTCACTGCGTTTGTATCTGTGATGAGAGGTTGCAACAATATGTGCTCATTCTGCATTGTTCCTTTCACTAGGGGGAGAGAGCGGTCACGTCCTGTGGAATCAATTGTGTGTGAGGTCAGAGAACTTTATAAAGAAGGTGTGAAAGAGGTAACTCTTCTTGGTCAGAATGTTAACAGCTATAATGATACCACTGGGAATGCAGACGTAGAACCAGGAACTAATTGGAAACTCAGTGATGGATTTTCCAGCATAGCCAAGGTAAAGAAAATGGGCTTGCGTTTTTCTGATCTCTTAGATCGTCTTTCCACAGAATTTCCTGAGATGAGGTTTAGATACACGTCTCCTCACCCTAAAGACTTTCCCGACGAATTCCTTTATTTAATGCGAGATAGACACAACATTTGCAAAAGCATTCATTTACCTGCTCAGAGTGGGAATAGCACAGTTCTTGAAAGAATGCGTAGGGGATATACCCGAGAGGCCTACTTAGATCTTGTGCACAAGATTCGATCAATCATTCCGGACGTGGGAATAACTAGTGATTTCATTTGTGGTAAGTGGCCTTTTCAACTTCTATAATATTTTGGATTAAATATTGGTTATTATGCATACGATACATTGGTATACCATTTAGTAGTAGTTAGTCTTAAAAGATAATTCCTTAGAAGTGCCCAGCTAATGGCAATGGTGATCGGATTATGGATATAGAACTTTGTCTGTGATATCCTTTTTTTTTAAAAAAATATTGTTATTATTATTATTATTATTTAATTCTAGGTATGATAAAACGTTTGCACCGGGAATCAGATTGCAAATTGTGTGAGAACAGTCTAAATTTCATCTGAAATACTAGAGGATTTGTTAGTCAGTTAACCAGTTAATGCTTGTTCTTTCATTCGATTTCTCTCCTCATTGCTTTTCCTCTGTCATGAATTGGATTCAACTGTCGTTTTGATCCCTATACCATTCACTCTTCTCTTTATTTTGATCTTATAACTTCTATAATATATATATCTCTAAAATTATGAACTTTTGTTACATTAACCTTGTTAATATATAAATTTGGGAAAAAACACTTTTGGTCCCTGAAATTTGGGTTAAGTTACACTTTGGTTCCCGAGTTTTCAACCTCAACAAAAATACCCCTGATGTTTGAGATAAAGAGCAATTTGGTCCCTGGCATCCATTTTGCCGTTAAATCCTAATAGCAAGCTGTCGTGGCACTATTATTTTAATTAAAAAAATGAATTATTATTATTTTTTTAAATAAAAATATATAAAAATATTAAAAAAATTATTATTTTATTATTATTTTTTAAATTCTCTCTCTCTCTTTCTTTCCATCTTCTTCCTTCCCCATCTCCATCTTCTTTAGCTCCGGTGGCCGGCCGCTGCCAGAATTTTTTTTTCCTTCTTTCTTCTTCTTCTCTTCTTCGCCTTTCTTTCCTTTCTTTTGTTTTTTTTTAAAACAAAGGGAGTTTCAGGGAGGAGGAGTTCTTCCTCCCCCTCCCTTTTCAGATCCAAAACTCCTCCTCCCTGAAACCGGCATGGAATCGGGCCTCCCCGAAACTCCCTTTGTTTTAAAAAAAACAGAAGAAAGGAAAGAAAGGAGAAGAAGAGAAGAAGAAGAAGAAAGAAAAAAAAAAAAAAAATTCCGGCAGCCGCCGCTGCCATTCGCCGGCAGCGGCCGGCCACCGAAGCTGAAGAAGGAGATGGGGAAGGAGAAGATGGAGAGGAGAAAGAAGATGAGAAGAAAGAGATGGAGAAGAAAGAGAGAGAGAAAGAATTTAAAAATAATAATAAAATAATAATATTTTTATTATTTTTATTTAAAAAAATTAAAAATTTATTTTTTAATTAAAATAATAGTGCCACATCAGCTTGCCGTTAGGATTTAACGGCAAAATGGATGACATGGACCAAATTGTTCCTTATCTCAAACCTCAGGGATATTTTTGTTGAGTTTGAAAACTTGGGGACCAAAGTGTAACTTAACCCAAACCTCACGGACCAAAAGTGTATTTTTCTCTATAAATTTTTTACCAGAAACAAGAAAAGGTTCCTTCAAAAGAGGAAGACAAAGTACAACCTCTCAGGCAAAGGGACAAGGAGTCCCTTCCCCAACAAAATTACAAGAACACCTTCCCATCTAAATTAGCGAGGAAGGTAGAGTGATTAAAAAATAAAAAAAAATTGTGTTAACTACTCCAATGGGAGGCCATGAACTGTAATGCTGATATAGACGCTTAAATAAGAAACGCATCTGTGACATTTGATTTAGTAAATAATGGTCACTATGTTATTCACATAACGCACAACAGATATCACTTCCATTTTGATTTAGTAAACAGTTGTCATGGTGGGATTGTAGTACGGGATTTTGAACATTCTTCTTTCTCTGTTAAAGAACGTTGTCAAATTCTTGTATGGGAGATGACATGTGATACCTGGTTGGATACCGTCACAGAACTTGCTGAGTTGGATCCATGTCATTCTATTTTTCATCAAAGTAGCTCGCGCTAATACTAGAGGGATTATGTGGTTAATGCAAACCGTAGCATTTAAATAAAAAAAAAATTTCCTTAACTTTTTTCTTCTCTTTGCTTTTATATCCATGGAGATTAGAGATTGTTTTTCTATTTCCCTCAAAGTTGAGGGATGAAAGTAGTGCTTAGCCTTCTATGACCTATTCTTGAAGCAAAAGTAGATTCCCCTATAATATCAGTGGTTTCAAATTGCAAACAAATGTCTATCTTGTCATTTTTTCTCTAATGTAGTGCACATGGTGGTATTACTCTCTTGATGCATCATTCTTCATTCCAATTTATAGGTTTCTGTGGGGAGACCGAAGAGGAACATGCAGACACTCTAAGTCTGATTAATGAAGTCGGTTACGATATGGCTTACATGTTTGCATATAGCATGAGAGAAAAAACTCATGCCCATCGGAACTATGTTGATGACGTTCCAGAGGAAGTGAAGCAGAGAAGACTTACTGAACTCATCGAAACTTTTCGAAATAGTACAGGTCGATGTTATGATTCACAAATTGGCAGTGTTCAATTGGTGCTTGTGGAAGGACCAAACAAGAGAGCTCCAGAGACAGAGCTGATTGGAAAGAGTGACAGAGGTCATAGAGTTTCGTTCGTAAATGTAGCAGTTCCACATCGAGATGGCGATTATGATGGACAACGGAAAGCAGTGGTTGGTGACTTTGTGGAAGTCCGTATATCAAAATCGACACGAGCGTCGTTGTTTGGAGAGGCACTTGCCATTACAAAACTGAGCTCATTTTTCAACAGTATGGATGAATCAATTGCCTGTGTGAGTTGAAGTTCTAATGAATTTAGATAATTTTGATTTTTGATAAAATGTTGCTTTAGTCTTCAACTACCTCTTTAATACATGAGGGCTGCTTTAATAATATTTTTTTTCTTACTATTCAAGGTGTAAAAATATCACTGTATCTGGGTTATAGCTGTCAAATGTTCTTCGACGCTTGTGATTTACAGAAATTTTGGTAGGTTGTTTTCAAATTCATA

mRNA sequence

CAGAACTCTACCATGGACGATCGAAAATGATGATTGATTAACTCCGCCAGTTCTCTTCCCATCCACAGCCTCTCAAATGGGCTTTCACGTTCTCAGAGCCCCTCCGTTCTCTTCCTCCACAACCATAATCTTCAAACCCACTTCTTCCGCTTCGTTTCTCTTCAAATTTGGTTATGCTCTCTACTCTTCACCTTTCTCCAAATCTTCTTCCTCCACTAGGACCTATTTCCGAGCTTCTTCAGCCAAATATGTTGCTTCTCCCGCCACCGCGATTCCGCTTTCTGGGTCTTTTTCTCGGAGAACTCGTAGTTTTCGTGGTGGGTTTATTGCAGCTACAGCTGCACCTGGCTCGGTCCACAAATCCGAGGAATTGAGGCCTTCCATTTCGCCTGAGCCATCTTGGGTTCAGAGGCAAAACGGGACTGAATCATTACCAGCATCTGAAGTGCCTTTAAGAGGTCGTATTTATCATGAAACTTATGGGTGTCAAATGAATATTAATGATATGGAGGTTGTTCTATCAATCATGAAAAATGCTGGATACAGTGAAACCGTTGACATTCCCGAGACTGCAGAGATCATTTTTATCAACACTTGTGCTATCAGGGACAATGCTGAACAGAAGGTGTGGCAAAGACTTAATTACTTTTGGTTTCTGAAGAGACATTGGAAAAGCAATGTTGCTATTGGAAGGTCACAGTCTCGGCACCCTCCAAAAGTAGTTGTCTTGGGGTGCATGGCTGAGAGGTTGAAAGATAAAATACTAGATGCAGACAAGATGGTTGATGTGGTTTGTGGACCTGATGCTTACAGAGACCTGCCGCGATTATTGGATGAAGTAGATTATGGTCAAAAGGGAATAAACACACTTCTTTCCCTCGAAGAAACTTATGCTGATATAAGTCCAGTACGAATATCCAAAAATTCAGTCACTGCGTTTGTATCTGTGATGAGAGGTTGCAACAATATGTGCTCATTCTGCATTGTTCCTTTCACTAGGGGGAGAGAGCGGTCACGTCCTGTGGAATCAATTGTGTGTGAGGTCAGAGAACTTTATAAAGAAGGTGTGAAAGAGGTAACTCTTCTTGGTCAGAATGTTAACAGCTATAATGATACCACTGGGAATGCAGACGTAGAACCAGGAACTAATTGGAAACTCAGTGATGGATTTTCCAGCATAGCCAAGGTAAAGAAAATGGGCTTGCGTTTTTCTGATCTCTTAGATCGTCTTTCCACAGAATTTCCTGAGATGAGGTTTAGATACACGTCTCCTCACCCTAAAGACTTTCCCGACGAATTCCTTTATTTAATGCGAGATAGACACAACATTTGCAAAAGCATTCATTTACCTGCTCAGAGTGGGAATAGCACAGTTCTTGAAAGAATGCGTAGGGGATATACCCGAGAGGCCTACTTAGATCTTGTGCACAAGATTCGATCAATCATTCCGGACGTGGGAATAACTAGTGATTTCATTTGTGGTTTCTGTGGGGAGACCGAAGAGGAACATGCAGACACTCTAAGTCTGATTAATGAAGTCGGTTACGATATGGCTTACATGTTTGCATATAGCATGAGAGAAAAAACTCATGCCCATCGGAACTATGTTGATGACGTTCCAGAGGAAGTGAAGCAGAGAAGACTTACTGAACTCATCGAAACTTTTCGAAATAGTACAGGTCGATGTTATGATTCACAAATTGGCAGTGTTCAATTGGTGCTTGTGGAAGGACCAAACAAGAGAGCTCCAGAGACAGAGCTGATTGGAAAGAGTGACAGAGGTCATAGAGTTTCGTTCGTAAATGTAGCAGTTCCACATCGAGATGGCGATTATGATGGACAACGGAAAGCAGTGGTTGGTGACTTTGTGGAAGTCCGTATATCAAAATCGACACGAGCGTCGTTGTTTGGAGAGGCACTTGCCATTACAAAACTGAGCTCATTTTTCAACAGTATGGATGAATCAATTGCCTGTGTGAGTTGAAGTTCTAATGAATTTAGATAATTTTGATTTTTGATAAAATGTTGCTTTAGTCTTCAACTACCTCTTTAATACATGAGGGCTGCTTTAATAATATTTTTTTTCTTACTATTCAAGGTGTAAAAATATCACTGTATCTGGGTTATAGCTGTCAAATGTTCTTCGACGCTTGTGATTTACAGAAATTTTGGTAGGTTGTTTTCAAATTCATA

Coding sequence (CDS)

ATGGGCTTTCACGTTCTCAGAGCCCCTCCGTTCTCTTCCTCCACAACCATAATCTTCAAACCCACTTCTTCCGCTTCGTTTCTCTTCAAATTTGGTTATGCTCTCTACTCTTCACCTTTCTCCAAATCTTCTTCCTCCACTAGGACCTATTTCCGAGCTTCTTCAGCCAAATATGTTGCTTCTCCCGCCACCGCGATTCCGCTTTCTGGGTCTTTTTCTCGGAGAACTCGTAGTTTTCGTGGTGGGTTTATTGCAGCTACAGCTGCACCTGGCTCGGTCCACAAATCCGAGGAATTGAGGCCTTCCATTTCGCCTGAGCCATCTTGGGTTCAGAGGCAAAACGGGACTGAATCATTACCAGCATCTGAAGTGCCTTTAAGAGGTCGTATTTATCATGAAACTTATGGGTGTCAAATGAATATTAATGATATGGAGGTTGTTCTATCAATCATGAAAAATGCTGGATACAGTGAAACCGTTGACATTCCCGAGACTGCAGAGATCATTTTTATCAACACTTGTGCTATCAGGGACAATGCTGAACAGAAGGTGTGGCAAAGACTTAATTACTTTTGGTTTCTGAAGAGACATTGGAAAAGCAATGTTGCTATTGGAAGGTCACAGTCTCGGCACCCTCCAAAAGTAGTTGTCTTGGGGTGCATGGCTGAGAGGTTGAAAGATAAAATACTAGATGCAGACAAGATGGTTGATGTGGTTTGTGGACCTGATGCTTACAGAGACCTGCCGCGATTATTGGATGAAGTAGATTATGGTCAAAAGGGAATAAACACACTTCTTTCCCTCGAAGAAACTTATGCTGATATAAGTCCAGTACGAATATCCAAAAATTCAGTCACTGCGTTTGTATCTGTGATGAGAGGTTGCAACAATATGTGCTCATTCTGCATTGTTCCTTTCACTAGGGGGAGAGAGCGGTCACGTCCTGTGGAATCAATTGTGTGTGAGGTCAGAGAACTTTATAAAGAAGGTGTGAAAGAGGTAACTCTTCTTGGTCAGAATGTTAACAGCTATAATGATACCACTGGGAATGCAGACGTAGAACCAGGAACTAATTGGAAACTCAGTGATGGATTTTCCAGCATAGCCAAGGTAAAGAAAATGGGCTTGCGTTTTTCTGATCTCTTAGATCGTCTTTCCACAGAATTTCCTGAGATGAGGTTTAGATACACGTCTCCTCACCCTAAAGACTTTCCCGACGAATTCCTTTATTTAATGCGAGATAGACACAACATTTGCAAAAGCATTCATTTACCTGCTCAGAGTGGGAATAGCACAGTTCTTGAAAGAATGCGTAGGGGATATACCCGAGAGGCCTACTTAGATCTTGTGCACAAGATTCGATCAATCATTCCGGACGTGGGAATAACTAGTGATTTCATTTGTGGTTTCTGTGGGGAGACCGAAGAGGAACATGCAGACACTCTAAGTCTGATTAATGAAGTCGGTTACGATATGGCTTACATGTTTGCATATAGCATGAGAGAAAAAACTCATGCCCATCGGAACTATGTTGATGACGTTCCAGAGGAAGTGAAGCAGAGAAGACTTACTGAACTCATCGAAACTTTTCGAAATAGTACAGGTCGATGTTATGATTCACAAATTGGCAGTGTTCAATTGGTGCTTGTGGAAGGACCAAACAAGAGAGCTCCAGAGACAGAGCTGATTGGAAAGAGTGACAGAGGTCATAGAGTTTCGTTCGTAAATGTAGCAGTTCCACATCGAGATGGCGATTATGATGGACAACGGAAAGCAGTGGTTGGTGACTTTGTGGAAGTCCGTATATCAAAATCGACACGAGCGTCGTTGTTTGGAGAGGCACTTGCCATTACAAAACTGAGCTCATTTTTCAACAGTATGGATGAATCAATTGCCTGTGTGAGTTGA

Protein sequence

MGFHVLRAPPFSSSTTIIFKPTSSASFLFKFGYALYSSPFSKSSSSTRTYFRASSAKYVASPATAIPLSGSFSRRTRSFRGGFIAATAAPGSVHKSEELRPSISPEPSWVQRQNGTESLPASEVPLRGRIYHETYGCQMNINDMEVVLSIMKNAGYSETVDIPETAEIIFINTCAIRDNAEQKVWQRLNYFWFLKRHWKSNVAIGRSQSRHPPKVVVLGCMAERLKDKILDADKMVDVVCGPDAYRDLPRLLDEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRGRERSRPVESIVCEVRELYKEGVKEVTLLGQNVNSYNDTTGNADVEPGTNWKLSDGFSSIAKVKKMGLRFSDLLDRLSTEFPEMRFRYTSPHPKDFPDEFLYLMRDRHNICKSIHLPAQSGNSTVLERMRRGYTREAYLDLVHKIRSIIPDVGITSDFICGFCGETEEEHADTLSLINEVGYDMAYMFAYSMREKTHAHRNYVDDVPEEVKQRRLTELIETFRNSTGRCYDSQIGSVQLVLVEGPNKRAPETELIGKSDRGHRVSFVNVAVPHRDGDYDGQRKAVVGDFVEVRISKSTRASLFGEALAITKLSSFFNSMDESIACVS

Homology

[Close]

BLAST of Lcy05g016200 vs. ExPASy Swiss-Prot
Match: Q8H0V1 (CDK5RAP1-like protein OS=Arabidopsis thaliana OX=3702 GN=At4g36390 PE=2 SV=1)

HSP 1 Score: 830.1 bits (2143), Expect = 1.7e-239
Identity = 429/617 (69.53%), Postives = 491/617 (79.58%), Query Frame = 0


Query: 16  TIIFKPTSSASFLFKFGYALYSSPFSKSSSSTRTYFRASSAKYVASPAT-----AIPLSG 75
           ++ FK ++   F  +F  +  +   S SSS+     R+S+ +    P       ++ LS 
Sbjct: 20  SLCFKASTQRCFALRFLSSKATHASSSSSSALLPRCRSSTHRLTQKPINRKKGFSLNLSR 79

Query: 76  SFSRRTRSFRGGFIAATAAPGSVHKSEELRPSISPEPSWVQRQNGTESLPASEVPLRGRI 135
           SFS    +  G F        S+H   +   +     S    +  +ES   S++  +GRI
Sbjct: 80  SFSISQIASSGKFDGP-----SLH---QFVSNAQAHASLTTPETESESTLDSDIASKGRI 139

Query: 136 YHETYGCQMNINDMEVVLSIMKNAGYSETVDIPETAEIIFINTCAIRDNAEQKVWQRLNY 195
           YHETYGCQMNINDME+VL+IMKN+GY E V  PE+AE+IF+NTCAIR+NAEQ+VWQRLNY
Sbjct: 140 YHETYGCQMNINDMEIVLAIMKNSGYKEVVTDPESAEVIFVNTCAIRENAEQRVWQRLNY 199

Query: 196 FWFLKRHWKSNVAIGRSQSRHPPKVVVLGCMAERLKDKILDADKMVDVVCGPDAYRDLPR 255
           FWFLKR WK N A GR++S  PPKVVVLGCMAERLKDKILD+DKMVDVVCGPDAYRDLPR
Sbjct: 200 FWFLKREWKVNAATGRAKSLKPPKVVVLGCMAERLKDKILDSDKMVDVVCGPDAYRDLPR 259

Query: 256 LLDEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRGR 315
           LL+EVDYGQKGINTLLSLEETYADISPVRIS+NS+TAFVSVMRGCNNMC+FCIVPFTRGR
Sbjct: 260 LLEEVDYGQKGINTLLSLEETYADISPVRISENSITAFVSVMRGCNNMCAFCIVPFTRGR 319

Query: 316 ERSRPVESIVCEVRELYKEGVKEVTLLGQNVNSYNDTTGNADVEPGTNWKLSDGFSSIAK 375
           ERSRPVESI+ EV EL++ GVKEVTLLGQNVNSYND   +AD E G NW+ S+GFSS  K
Sbjct: 320 ERSRPVESIIREVGELWESGVKEVTLLGQNVNSYND--DSADRESGANWEYSEGFSSRCK 379

Query: 376 VKKMGLRFSDLLDRLSTEFPEMRFRYTSPHPKDFPDEFLYLMRDRHNICKSIHLPAQSGN 435
           VK MGLRF+DLLDRLS EFPEMRFR+TSPHPKD+PDE LYLMRDRHNIC  IHLPAQSGN
Sbjct: 380 VKNMGLRFADLLDRLSVEFPEMRFRFTSPHPKDYPDELLYLMRDRHNICNLIHLPAQSGN 439

Query: 436 STVLERMRRGYTREAYLDLVHKIRSIIPDVGITSDFICGFCGETEEEHADTLSLINEVGY 495
           S +LE+MRRGYTREAYLDLV KIRSIIPDV ITSDFI GFCGETEEEH +TLSL+  VGY
Sbjct: 440 SRILEQMRRGYTREAYLDLVKKIRSIIPDVAITSDFITGFCGETEEEHQETLSLVRAVGY 499

Query: 496 DMAYMFAYSMREKTHAHRNYVDDVPEEVKQRRLTELIETFRNSTGRCYDSQIGSVQLVLV 555
           DMAYMFAYSMREKTHAHRNY DDVPEEVKQRRLTELI+ FR +TG CYDSQ+GS QLVLV
Sbjct: 500 DMAYMFAYSMREKTHAHRNYTDDVPEEVKQRRLTELIDAFRETTGPCYDSQVGSTQLVLV 559

Query: 556 EGPNKRAPETELIGKSDRGHRVSFVNVAVPHR----DGDYDGQRKAVVGDFVEVRISKST 615
           EGPNKRAPETELIGK+D+GHRVSFV   +  +    DGD D +R   +GDFVEV+I KST
Sbjct: 560 EGPNKRAPETELIGKTDKGHRVSFVTKPLFDKACLLDGD-DLKRNPGIGDFVEVQIEKST 619

Query: 616 RASLFGEALAITKLSSF 624
           RASLFGEALAI+K+S F
Sbjct: 620 RASLFGEALAISKMSLF 625

[Close]

BLAST of Lcy05g016200 vs. ExPASy Swiss-Prot
Match: Q2R1U4 (CDK5RAP1-like protein OS=Oryza sativa subsp. japonica OX=39947 GN=Os11g0592800 PE=2 SV=1)

HSP 1 Score: 830.1 bits (2143), Expect = 1.7e-239
Identity = 407/538 (75.65%), Postives = 463/538 (86.06%), Query Frame = 0


Query: 90  PGSVHKSEELRP-SISPEPSWVQRQNGTESLPASEVPLRGRIYHETYGCQMNINDMEVVL 149
           P  + +S   RP + S   +  + Q   ES P +    +GRIYHETYGCQMN+NDME+VL
Sbjct: 56  PRRLARSGPSRPLAASAATAVSEAQTDLESGPVT--ASKGRIYHETYGCQMNVNDMEIVL 115

Query: 150 SIMKNAGYSETVDIPETAEIIFINTCAIRDNAEQKVWQRLNYFWFLKRHWKSNVAIGRSQ 209
           SIMKN GY E V  PE+AEIIFINTCAIRDNAEQKVWQRLNYFWFLKR WK+NVA GRS+
Sbjct: 116 SIMKNEGYDEIVPDPESAEIIFINTCAIRDNAEQKVWQRLNYFWFLKRQWKANVAAGRSR 175

Query: 210 SRHPPKVVVLGCMAERLKDKILDADKMVDVVCGPDAYRDLPRLLDEVDYGQKGINTLLSL 269
           S  PPK+ VLGCMAERLK+KILD+DKMVDVVCGPDAYRDLPRLL EVDYGQKGINTLLSL
Sbjct: 176 SLRPPKIAVLGCMAERLKEKILDSDKMVDVVCGPDAYRDLPRLLQEVDYGQKGINTLLSL 235

Query: 270 EETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRGRERSRPVESIVCEVRELYK 329
           EETYADI+PVRIS NSVTAFVS+MRGCNNMCSFCIVPFTRGRERSRPV SIV EV EL+K
Sbjct: 236 EETYADITPVRISDNSVTAFVSIMRGCNNMCSFCIVPFTRGRERSRPVSSIVREVGELWK 295

Query: 330 EGVKEVTLLGQNVNSYNDTTGNADVEPGTNWKLSDGFSSIAKVKKMGLRFSDLLDRLSTE 389
            GVKEV LLGQNVNSYNDT+   ++EPG NW+LS+GFSS+ KVK MGLRF+DLLD+LS E
Sbjct: 296 AGVKEVMLLGQNVNSYNDTSEVEELEPGKNWELSEGFSSMCKVKNMGLRFADLLDQLSLE 355

Query: 390 FPEMRFRYTSPHPKDFPDEFLYLMRDRHNICKSIHLPAQSGNSTVLERMRRGYTREAYLD 449
           +PEMRFR+TSPHPKD+PDE LYLMRDRHN+CK IH+PAQSG+S VLERMRRGYTREAYL+
Sbjct: 356 YPEMRFRFTSPHPKDYPDELLYLMRDRHNVCKLIHMPAQSGSSAVLERMRRGYTREAYLE 415

Query: 450 LVHKIRSIIPDVGITSDFICGFCGETEEEHADTLSLINEVGYDMAYMFAYSMREKTHAHR 509
           LV KIRSIIPDVG++SDFI GFCGETEEEHA+TL+L+  VGYDMAYMFAYSMREKTHAHR
Sbjct: 416 LVQKIRSIIPDVGLSSDFISGFCGETEEEHAETLTLVRAVGYDMAYMFAYSMREKTHAHR 475

Query: 510 NYVDDVPEEVKQRRLTELIETFRNSTGRCYDSQIGSVQLVLVEGPNKRAPETELIGKSDR 569
           NYVDDVP++VKQRRL ELI TFR +T + YDSQ+G+VQLVLVEGPNKRAPETE+IGK+DR
Sbjct: 476 NYVDDVPDDVKQRRLAELISTFRETTAKIYDSQVGTVQLVLVEGPNKRAPETEMIGKTDR 535

Query: 570 GHRVSFVNVAVPHRDGDYDGQRKAVVGDFVEVRISKSTRASLFGEALAITKLSSFFNS 627
           GHRVSF +V VPH   + D  RK VVGDF+EV+I+KS+ ASL G+ +A T LS F+ +
Sbjct: 536 GHRVSFASVPVPH-TFEGDELRKPVVGDFIEVKITKSSTASLSGDVIARTSLSKFYKN 590

[Close]

BLAST of Lcy05g016200 vs. ExPASy Swiss-Prot
Match: Q9JLH6 (Mitochondrial tRNA methylthiotransferase CDK5RAP1 OS=Rattus norvegicus OX=10116 GN=Cdk5rap1 PE=1 SV=1)

HSP 1 Score: 515.4 bits (1326), Expect = 9.3e-145
Identity = 280/546 (51.28%), Postives = 375/546 (68.68%), Query Frame = 0


Query: 92  SVHKSEELRPSISPEPSWVQRQNGTESLPASEVPLRGRIYHETYGCQMNINDMEVVLSIM 151
           SV + +   P +   P ++   +G E L         ++Y ETYGCQMN+ND E+  SI+
Sbjct: 69  SVPQEKPSSPEVEDPPPYL---SGDELLGRQR-----KVYLETYGCQMNVNDTEIAWSIL 128

Query: 152 KNAGYSETVDIPETAEIIFINTCAIRDNAEQKVWQRLNYFWFLKRHWKSNVAIGRSQSRH 211
           + +GY  T ++ E A++I + TC+IR+ AEQ +W RL+    LK          R +SR 
Sbjct: 129 QKSGYLRTSNLQE-ADVILLVTCSIREKAEQTIWNRLHQLKVLKAK--------RPRSRV 188

Query: 212 PPKVVVLGCMAERLKDKILDADKMVDVVCGPDAYRDLPRLLDEVDYGQKGINTLLSLEET 271
           P ++ +LGCMAERLK +IL+ +KMVD++ GPDAYRDLPRLL  V+ GQ+  N LLSL+ET
Sbjct: 189 PLRIGILGCMAERLKGEILNREKMVDLLAGPDAYRDLPRLLAVVESGQQAANVLLSLDET 248

Query: 272 YADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRGRERSRPVESIVCEVRELYKEGV 331
           YADI PV+ S ++ +AFVS+MRGC+NMCS+CIVPFTRGRERSRPV SI+ EVR+L ++G+
Sbjct: 249 YADIMPVQTSPSATSAFVSIMRGCDNMCSYCIVPFTRGRERSRPVASILDEVRKLSEQGL 308

Query: 332 KEVTLLGQNVNSYNDTTGNADVEPGT--NWKLSDGFSSIAKVKKMGLRFSDLLDRLSTEF 391
           KEVTLLGQNVNS+ D   N++V+  +  +  LS GF++  K K+ GLRFS LLD++S   
Sbjct: 309 KEVTLLGQNVNSFRD---NSEVQFSSTGSANLSRGFTTNYKPKQGGLRFSHLLDQVSRID 368

Query: 392 PEMRFRYTSPHPKDFPDEFLYLMRDRHNICKSIHLPAQSGNSTVLERMRRGYTREAYLDL 451
           PEMR R+TSPHPKDFPDE L L+R+RHNICK IHLPAQSG+S VLE MRRGY+REAY+ L
Sbjct: 369 PEMRIRFTSPHPKDFPDEVLQLIRERHNICKQIHLPAQSGSSRVLEAMRRGYSREAYVAL 428

Query: 452 VHKIRSIIPDVGITSDFICGFCGETEEEHADTLSLINEVGYDMAYMFAYSMREKTHAHRN 511
           VH IR  IP VG++SDFI GFCGETE++H  T+SL+ EV Y+  ++FAYSMR+KT A+  
Sbjct: 429 VHHIREAIPGVGLSSDFITGFCGETEDDHLQTVSLLREVQYNTGFLFAYSMRQKTRAYHR 488

Query: 512 YVDDVPEEVKQRRLTELIETFRNSTGRCYDSQIGSVQLVLVEGPNKRAPETELIGKSDRG 571
             DDVPEEVK RRL ELI  FR    +   + +G  QLVLVEG +KR+  T+L G++D  
Sbjct: 489 LKDDVPEEVKLRRLEELITVFREEASKVNATSVGCTQLVLVEGFSKRS-TTDLCGRNDAN 548

Query: 572 HRVSFVNVAVPHRDGDYDGQRKAVVGDFVEVRISKSTRASLFGEALAITKLSSFFNSMDE 631
            +V F +  V     D   + +A  GD+V V+I  ++  +L G  L  T +       D 
Sbjct: 549 LKVIFPDAEVEDIT-DPGLKVRAQPGDYVLVKIISASSQTLKGHILCRTTMK------DS 586

Query: 632 SIACVS 636
           S+ C++
Sbjct: 609 SMNCLT 586

[Close]

BLAST of Lcy05g016200 vs. ExPASy Swiss-Prot
Match: Q8BTW8 (Mitochondrial tRNA methylthiotransferase CDK5RAP1 OS=Mus musculus OX=10090 GN=Cdk5rap1 PE=1 SV=2)

HSP 1 Score: 511.5 bits (1316), Expect = 1.3e-143
Identity = 273/530 (51.51%), Postives = 365/530 (68.87%), Query Frame = 0


Query: 92  SVHKSEELRPSISPEPSWVQRQNGTESLPASEVPLRGRIYHETYGCQMNINDMEVVLSIM 151
           SV + +   P +   P ++   +G E L         ++Y ETYGCQMN+ND E+  SI+
Sbjct: 71  SVPQEKPSSPEVEDPPPYL---SGDELLGRQR-----KVYLETYGCQMNVNDTEIAWSIL 130

Query: 152 KNAGYSETVDIPETAEIIFINTCAIRDNAEQKVWQRLNYFWFLKRHWKSNVAIGRSQSRH 211
           + +GY  T ++ E A++I + TC+IR+ AEQ +W RL+    LK          R +SR 
Sbjct: 131 QKSGYLRTSNLQE-ADVILLVTCSIREKAEQTIWNRLHQLKVLKTK--------RPRSRV 190

Query: 212 PPKVVVLGCMAERLKDKILDADKMVDVVCGPDAYRDLPRLLDEVDYGQKGINTLLSLEET 271
           P ++ +LGCMAERLK +IL+ +KMVD++ GPDAYRDLPRLL  V+ GQ+  N LLSL+ET
Sbjct: 191 PLRIGILGCMAERLKGEILNREKMVDLLAGPDAYRDLPRLLAVVESGQQAANVLLSLDET 250

Query: 272 YADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRGRERSRPVESIVCEVRELYKEGV 331
           YADI PV+ S ++ +AFVS+MRGC+NMCS+CIVPFTRGRERSRPV SI+ EVR+L ++G+
Sbjct: 251 YADIMPVQTSPSATSAFVSIMRGCDNMCSYCIVPFTRGRERSRPVASILDEVRKLSEQGL 310

Query: 332 KEVTLLGQNVNSYNDTTGNADVEPGTNWKLSDGFSSIAKVKKMGLRFSDLLDRLSTEFPE 391
           KEVTLLGQNVNS+ D +         +  LS GF++  K K+ GLRFS LLD++S   PE
Sbjct: 311 KEVTLLGQNVNSFRDNS-EVQFNNAGSANLSRGFTTNYKPKQGGLRFSHLLDQVSRIDPE 370

Query: 392 MRFRYTSPHPKDFPDEFLYLMRDRHNICKSIHLPAQSGNSTVLERMRRGYTREAYLDLVH 451
           MR R+TSPHPKDFPDE L L+R+RHNICK IHLPAQSG+S VL+ MRRGY+REAY+ LVH
Sbjct: 371 MRIRFTSPHPKDFPDEVLQLIRERHNICKQIHLPAQSGSSRVLDAMRRGYSREAYVALVH 430

Query: 452 KIRSIIPDVGITSDFICGFCGETEEEHADTLSLINEVGYDMAYMFAYSMREKTHAHRNYV 511
            +R  IP V ++SDFI GFCGETE++H  T+SL+ EV Y+  ++FAYSMR+KT A+    
Sbjct: 431 HVRETIPGVSLSSDFITGFCGETEDDHRQTVSLLREVQYNTGFLFAYSMRQKTRAYHRLK 490

Query: 512 DDVPEEVKQRRLTELIETFRNSTGRCYDSQIGSVQLVLVEGPNKRAPETELIGKSDRGHR 571
           DDVPEEVK RRL ELI  FR    +   + +G  QLVLVEG +KR+  T+L G++D   +
Sbjct: 491 DDVPEEVKLRRLEELITVFREEASKANKTSVGCSQLVLVEGFSKRS-TTDLCGRNDANLK 550

Query: 572 VSFVNVAVPHRDGDYDGQR-KAVVGDFVEVRISKSTRASLFGEALAITKL 621
           V F +  V   D    G + +A  GD+V V+I+ ++  +L G  L  T +
Sbjct: 551 VIFPDAEV--EDITNPGLKVRAQPGDYVLVKITSASSQTLKGHILCRTTM 579

[Close]

BLAST of Lcy05g016200 vs. ExPASy Swiss-Prot
Match: Q9VGZ1 (CDK5RAP1-like protein OS=Drosophila melanogaster OX=7227 GN=CG6345 PE=2 SV=1)

HSP 1 Score: 508.1 bits (1307), Expect = 1.5e-142
Identity = 258/496 (52.02%), Postives = 342/496 (68.95%), Query Frame = 0


Query: 129 RIYHETYGCQMNINDMEVVLSIMKNAGYSETVDIPETAEIIFINTCAIRDNAEQKVWQRL 188
           +++ E YGCQMN ND EVV SI+K  GY    + PE A++I + TCA+RD AEQ++  RL
Sbjct: 93  KVHFEVYGCQMNTNDTEVVFSILKENGYLRCQE-PEEADVIMLVTCAVRDGAEQRIRNRL 152

Query: 189 NYFWFLKRHWKSNVAIGRSQSRHPPKVVVLGCMAERLKDKILDADKMVDVVCGPDAYRDL 248
            +   +K          RS  RHP ++ +LGCMAERLK+K+L+ ++ VDV+ GPD+Y+DL
Sbjct: 153 KHLRAMKNK--------RSTRRHPLQLTLLGCMAERLKEKLLEQEQCVDVIAGPDSYKDL 212

Query: 249 PRLLD-EVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFT 308
           PRLL     YG   IN LLSL+ETYAD+ PVR++  S TAFVS+MRGC+NMC++CIVPFT
Sbjct: 213 PRLLAISRHYGNSAINVLLSLDETYADVMPVRLNSESPTAFVSIMRGCDNMCTYCIVPFT 272

Query: 309 RGRERSRPVESIVCEVRELYKEGVKEVTLLGQNVNSYNDTTGNADVEPGTNWKLSDGFSS 368
           RGRERSRP+ SIV EV+ L ++GVKEVTLLGQNVNSY D T   + +         GFS+
Sbjct: 273 RGRERSRPLASIVAEVKALAEQGVKEVTLLGQNVNSYRDRTAQEE-QDSLKATPVPGFST 332

Query: 369 IAKVKKMGLRFSDLLDRLSTEFPEMRFRYTSPHPKDFPDEFLYLMRDRHNICKSIHLPAQ 428
           + K K  G  F+ LL  ++   P+MR R+TSPHPKDF DE L ++RD  N+CK +HLPAQ
Sbjct: 333 VYKPKTGGTPFAALLRSVAQAVPDMRIRFTSPHPKDFSDEVLEVIRDHPNVCKQLHLPAQ 392

Query: 429 SGNSTVLERMRRGYTREAYLDLVHKIRSIIPDVGITSDFICGFCGETEEEHADTLSLINE 488
           SGN+ VLERMRRGY+REAYL+LV  IR  +P+VG++SDFICGFCGETEEE  DT+SLI +
Sbjct: 393 SGNTQVLERMRRGYSREAYLELVQHIRQFLPNVGLSSDFICGFCGETEEEFQDTVSLIQQ 452

Query: 489 VGYDMAYMFAYSMREKTHAHRNYVDDVPEEVKQRRLTELIETFRNSTGRCYDSQIGSVQL 548
           V Y++AY+FAYSMREKT AHR Y DDVP  VK  RL  +++ FR    + +    G  QL
Sbjct: 453 VQYNVAYLFAYSMREKTTAHRRYKDDVPINVKNERLQRMVQVFREGATQLHRKMEGQEQL 512

Query: 549 VLVEGPNKRAPETELIGKSDRGHRVSFVNVAVPHRDGDYDGQRKAVVGDFVEVRISKSTR 608
           +L+EG +KR+ +    G++D   +V   ++ VP   GD   ++   VGDF+ VRI +S  
Sbjct: 513 ILIEGKSKRS-DAHWFGRNDANIKVIVPSIYVP-ISGDSTARKSFGVGDFLAVRIEESNS 572

Query: 609 ASLFGEALAITKLSSF 624
             L G  L ++ ++ F
Sbjct: 573 QVLKGTPLELSNITDF 576

[Close]

BLAST of Lcy05g016200 vs. ExPASy TrEMBL
Match: A0A5D3CNB2 (CDK5RAP1-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold496G00300 PE=3 SV=1)

HSP 1 Score: 1182.9 bits (3059), Expect = 0.0e+00
Identity = 590/635 (92.91%), Postives = 604/635 (95.12%), Query Frame = 0


Query: 1   MGFHVLRAPPFSSSTTIIFKPTSSASFLFKFGYALYSSPFSKSSSSTRTYFRASSAKYVA 60
           MGFHVLRAPPFSSSTTIIFKPTSS   LFKF YALYS PFSKSSSS+ +YF  SS  YVA
Sbjct: 1   MGFHVLRAPPFSSSTTIIFKPTSS---LFKFRYALYSPPFSKSSSSSISYFLPSSPNYVA 60

Query: 61  SPATAIPLSGSFSRRTRSFRGGFIAATAAPGSVHKSEELRPSISPEPSWVQRQNGTESLP 120
           SP TAIPLSGSFSR TR FRGGFIAAT A GSV + EELRPSIS E SWV RQNGTESLP
Sbjct: 61  SPTTAIPLSGSFSRSTRRFRGGFIAATTASGSVQRLEELRPSISTEQSWVLRQNGTESLP 120

Query: 121 ASEVPLRGRIYHETYGCQMNINDMEVVLSIMKNAGYSETVDIPETAEIIFINTCAIRDNA 180
           AS+VP RGR+YHETYGCQMNINDMEVVLSIMK AGY ETVD PETAEIIFINTCAIRDNA
Sbjct: 121 ASDVPSRGRVYHETYGCQMNINDMEVVLSIMKKAGYGETVDTPETAEIIFINTCAIRDNA 180

Query: 181 EQKVWQRLNYFWFLKRHWKSNVAIGRSQSRHPPKVVVLGCMAERLKDKILDADKMVDVVC 240
           EQKVWQRLNYFWFLKR WKSNVAIGRSQSRHPPKVVVLGCMAERLKDKILD+DKMVDVVC
Sbjct: 181 EQKVWQRLNYFWFLKRQWKSNVAIGRSQSRHPPKVVVLGCMAERLKDKILDSDKMVDVVC 240

Query: 241 GPDAYRDLPRLLDEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCS 300
           GPDAYRDLPRLLDEVDYGQKGINTLLSLEETYADISPVRI+KNSVTAFVSVMRGCNNMCS
Sbjct: 241 GPDAYRDLPRLLDEVDYGQKGINTLLSLEETYADISPVRIAKNSVTAFVSVMRGCNNMCS 300

Query: 301 FCIVPFTRGRERSRPVESIVCEVRELYKEGVKEVTLLGQNVNSYNDTTGNADVEPGTNWK 360
           FCIVPFTRGRERSRPVESIVCEV+ELY+EGVKEVTLLGQNVNSYNDTT NAD+EPGTNWK
Sbjct: 301 FCIVPFTRGRERSRPVESIVCEVKELYREGVKEVTLLGQNVNSYNDTTENADIEPGTNWK 360

Query: 361 LSDGFSSIAKVKKMGLRFSDLLDRLSTEFPEMRFRYTSPHPKDFPDEFLYLMRDRHNICK 420
           LSDGFS+IAKVKKMGLRFSDLLDRLSTEFPEMRFRYTSPHPKDFPDEFLYLMRDRHNICK
Sbjct: 361 LSDGFSTIAKVKKMGLRFSDLLDRLSTEFPEMRFRYTSPHPKDFPDEFLYLMRDRHNICK 420

Query: 421 SIHLPAQSGNSTVLERMRRGYTREAYLDLVHKIRSIIPDVGITSDFICGFCGETEEEHAD 480
           SIHLPAQSGNS VLERMRRGYTREAYLDLVHKIRSIIPDVGITSDFICGFCGETEEEHAD
Sbjct: 421 SIHLPAQSGNSIVLERMRRGYTREAYLDLVHKIRSIIPDVGITSDFICGFCGETEEEHAD 480

Query: 481 TLSLINEVGYDMAYMFAYSMREKTHAHRNYVDDVPEEVKQRRLTELIETFRNSTGRCYDS 540
           TLSLINEVGYDMAYMFAYSMREKTHAHRNYVDD+PEEVKQRRLTELIE FRNSTGRCYDS
Sbjct: 481 TLSLINEVGYDMAYMFAYSMREKTHAHRNYVDDIPEEVKQRRLTELIEAFRNSTGRCYDS 540

Query: 541 QIGSVQLVLVEGPNKRAPETELIGKSDRGHRVSFVNVAVPHRDGDYDGQRKAVVGDFVEV 600
           QIGSVQLVLVEGPNKRAPETE+IGKSDR HRVSFVNVAVPHRDGDYDG RKAVVGDFVEV
Sbjct: 541 QIGSVQLVLVEGPNKRAPETEMIGKSDRSHRVSFVNVAVPHRDGDYDGHRKAVVGDFVEV 600

Query: 601 RISKSTRASLFGEALAITKLSSFFNSMDESIACVS 636
           RISKSTRASLFGEALAITKLSSF+N MDESIACVS
Sbjct: 601 RISKSTRASLFGEALAITKLSSFYNRMDESIACVS 632

[Close]

BLAST of Lcy05g016200 vs. ExPASy TrEMBL
Match: A0A1S3BLE1 (CDK5RAP1-like protein OS=Cucumis melo OX=3656 GN=LOC103491318 PE=3 SV=1)

HSP 1 Score: 1182.9 bits (3059), Expect = 0.0e+00
Identity = 590/635 (92.91%), Postives = 604/635 (95.12%), Query Frame = 0


Query: 1   MGFHVLRAPPFSSSTTIIFKPTSSASFLFKFGYALYSSPFSKSSSSTRTYFRASSAKYVA 60
           MGFHVLRAPPFSSSTTIIFKPTSS   LFKF YALYS PFSKSSSS+ +YF  SS  YVA
Sbjct: 1   MGFHVLRAPPFSSSTTIIFKPTSS---LFKFRYALYSPPFSKSSSSSISYFLPSSPNYVA 60

Query: 61  SPATAIPLSGSFSRRTRSFRGGFIAATAAPGSVHKSEELRPSISPEPSWVQRQNGTESLP 120
           SP TAIPLSGSFSR TR FRGGFIAAT A GSV + EELRPSIS E SWV RQNGTESLP
Sbjct: 61  SPTTAIPLSGSFSRSTRRFRGGFIAATTASGSVQRLEELRPSISTEQSWVLRQNGTESLP 120

Query: 121 ASEVPLRGRIYHETYGCQMNINDMEVVLSIMKNAGYSETVDIPETAEIIFINTCAIRDNA 180
           AS+VP RGR+YHETYGCQMNINDMEVVLSIMK AGY ETVD PETAEIIFINTCAIRDNA
Sbjct: 121 ASDVPSRGRVYHETYGCQMNINDMEVVLSIMKKAGYGETVDTPETAEIIFINTCAIRDNA 180

Query: 181 EQKVWQRLNYFWFLKRHWKSNVAIGRSQSRHPPKVVVLGCMAERLKDKILDADKMVDVVC 240
           EQKVWQRLNYFWFLKR WKSNVAIGRSQSRHPPKVVVLGCMAERLKDKILD+DKMVDVVC
Sbjct: 181 EQKVWQRLNYFWFLKRQWKSNVAIGRSQSRHPPKVVVLGCMAERLKDKILDSDKMVDVVC 240

Query: 241 GPDAYRDLPRLLDEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCS 300
           GPDAYRDLPRLLDEVDYGQKGINTLLSLEETYADISPVRI+KNSVTAFVSVMRGCNNMCS
Sbjct: 241 GPDAYRDLPRLLDEVDYGQKGINTLLSLEETYADISPVRIAKNSVTAFVSVMRGCNNMCS 300

Query: 301 FCIVPFTRGRERSRPVESIVCEVRELYKEGVKEVTLLGQNVNSYNDTTGNADVEPGTNWK 360
           FCIVPFTRGRERSRPVESIVCEV+ELY+EGVKEVTLLGQNVNSYNDTT NAD+EPGTNWK
Sbjct: 301 FCIVPFTRGRERSRPVESIVCEVKELYREGVKEVTLLGQNVNSYNDTTENADIEPGTNWK 360

Query: 361 LSDGFSSIAKVKKMGLRFSDLLDRLSTEFPEMRFRYTSPHPKDFPDEFLYLMRDRHNICK 420
           LSDGFS+IAKVKKMGLRFSDLLDRLSTEFPEMRFRYTSPHPKDFPDEFLYLMRDRHNICK
Sbjct: 361 LSDGFSTIAKVKKMGLRFSDLLDRLSTEFPEMRFRYTSPHPKDFPDEFLYLMRDRHNICK 420

Query: 421 SIHLPAQSGNSTVLERMRRGYTREAYLDLVHKIRSIIPDVGITSDFICGFCGETEEEHAD 480
           SIHLPAQSGNS VLERMRRGYTREAYLDLVHKIRSIIPDVGITSDFICGFCGETEEEHAD
Sbjct: 421 SIHLPAQSGNSIVLERMRRGYTREAYLDLVHKIRSIIPDVGITSDFICGFCGETEEEHAD 480

Query: 481 TLSLINEVGYDMAYMFAYSMREKTHAHRNYVDDVPEEVKQRRLTELIETFRNSTGRCYDS 540
           TLSLINEVGYDMAYMFAYSMREKTHAHRNYVDD+PEEVKQRRLTELIE FRNSTGRCYDS
Sbjct: 481 TLSLINEVGYDMAYMFAYSMREKTHAHRNYVDDIPEEVKQRRLTELIEAFRNSTGRCYDS 540

Query: 541 QIGSVQLVLVEGPNKRAPETELIGKSDRGHRVSFVNVAVPHRDGDYDGQRKAVVGDFVEV 600
           QIGSVQLVLVEGPNKRAPETE+IGKSDR HRVSFVNVAVPHRDGDYDG RKAVVGDFVEV
Sbjct: 541 QIGSVQLVLVEGPNKRAPETEMIGKSDRSHRVSFVNVAVPHRDGDYDGHRKAVVGDFVEV 600

Query: 601 RISKSTRASLFGEALAITKLSSFFNSMDESIACVS 636
           RISKSTRASLFGEALAITKLSSF+N MDESIACVS
Sbjct: 601 RISKSTRASLFGEALAITKLSSFYNRMDESIACVS 632

[Close]

BLAST of Lcy05g016200 vs. ExPASy TrEMBL
Match: A0A6J1EIA8 (CDK5RAP1-like protein OS=Cucurbita moschata OX=3662 GN=LOC111434491 PE=3 SV=1)

HSP 1 Score: 1180.6 bits (3053), Expect = 0.0e+00
Identity = 586/635 (92.28%), Postives = 603/635 (94.96%), Query Frame = 0


Query: 1   MGFHVLRAPPFSSSTTIIFKPTSSASFLFKFGYALYSSPFSKSSSSTRTYFRASSAKYVA 60
           MG HVL +PPFSSST+IIFKPTSSAS LFKFGYAL     SKS SST TY R SS KYVA
Sbjct: 1   MGLHVLISPPFSSSTSIIFKPTSSASLLFKFGYAL-----SKSPSSTTTYLRPSSLKYVA 60

Query: 61  SPATAIPLSGSFSRRTRSFRGGFIAATAAPGSVHKSEELRPSISPEPSWVQRQNGTESLP 120
           SP T+IPLSG FSRRTR F GGFIAATAAPGSV KSEELRPS+SP+ SWVQRQNG E L 
Sbjct: 61  SPPTSIPLSGYFSRRTRRFHGGFIAATAAPGSVQKSEELRPSVSPDQSWVQRQNGIEPLT 120

Query: 121 ASEVPLRGRIYHETYGCQMNINDMEVVLSIMKNAGYSETVDIPETAEIIFINTCAIRDNA 180
            SEVPLRGRIYHETYGCQMNINDMEVVLSIMKNAGYSETVD+PETAE+IFINTCAIRDNA
Sbjct: 121 GSEVPLRGRIYHETYGCQMNINDMEVVLSIMKNAGYSETVDVPETAEVIFINTCAIRDNA 180

Query: 181 EQKVWQRLNYFWFLKRHWKSNVAIGRSQSRHPPKVVVLGCMAERLKDKILDADKMVDVVC 240
           EQKVWQRLNYFWFLKR WKSNVAIGRSQSRHPPKVVVLGCMAERLKDKILDADKMVDVVC
Sbjct: 181 EQKVWQRLNYFWFLKREWKSNVAIGRSQSRHPPKVVVLGCMAERLKDKILDADKMVDVVC 240

Query: 241 GPDAYRDLPRLLDEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCS 300
           GPDAYRDLPRLLDEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCS
Sbjct: 241 GPDAYRDLPRLLDEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCS 300

Query: 301 FCIVPFTRGRERSRPVESIVCEVRELYKEGVKEVTLLGQNVNSYNDTTGNADVEPGTNWK 360
           FCIVPFTRGRERSRPVESIV EVRELY+EGVKEVTLLGQNVNSYNDT  N DVEPGTNWK
Sbjct: 301 FCIVPFTRGRERSRPVESIVSEVRELYREGVKEVTLLGQNVNSYNDTIDNTDVEPGTNWK 360

Query: 361 LSDGFSSIAKVKKMGLRFSDLLDRLSTEFPEMRFRYTSPHPKDFPDEFLYLMRDRHNICK 420
           LSDGFS+IAKVKKMGLRFSDLLDRLSTEFPEMRFRYTSPHPKDFPDEFLYLMRD+HNICK
Sbjct: 361 LSDGFSTIAKVKKMGLRFSDLLDRLSTEFPEMRFRYTSPHPKDFPDEFLYLMRDKHNICK 420

Query: 421 SIHLPAQSGNSTVLERMRRGYTREAYLDLVHKIRSIIPDVGITSDFICGFCGETEEEHAD 480
           SIHLPAQSGNSTVLERMRRGYTRE YLDLVHKIRSIIPDVGITSDFICGFCGETEEEHAD
Sbjct: 421 SIHLPAQSGNSTVLERMRRGYTREVYLDLVHKIRSIIPDVGITSDFICGFCGETEEEHAD 480

Query: 481 TLSLINEVGYDMAYMFAYSMREKTHAHRNYVDDVPEEVKQRRLTELIETFRNSTGRCYDS 540
           TLSLINEVGYDMAYMFAYSMREKTHAHRNYVDDVPE+VKQRRLTELIETFRNSTG+CYD 
Sbjct: 481 TLSLINEVGYDMAYMFAYSMREKTHAHRNYVDDVPEDVKQRRLTELIETFRNSTGQCYDM 540

Query: 541 QIGSVQLVLVEGPNKRAPETELIGKSDRGHRVSFVNVAVPHRDGDYDGQRKAVVGDFVEV 600
           QIGS+QLVLVEGPNKRAPETE+IGKSDRGHRVSFVNVAVPHRDGDYDGQRK  +GDFVEV
Sbjct: 541 QIGSIQLVLVEGPNKRAPETEMIGKSDRGHRVSFVNVAVPHRDGDYDGQRKVAIGDFVEV 600

Query: 601 RISKSTRASLFGEALAITKLSSFFNSMDESIACVS 636
           RISKSTRASLFGEALA+TKLSSF+NSMDESIACVS
Sbjct: 601 RISKSTRASLFGEALAVTKLSSFYNSMDESIACVS 630

[Close]

BLAST of Lcy05g016200 vs. ExPASy TrEMBL
Match: A0A0A0KDY2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G411190 PE=3 SV=1)

HSP 1 Score: 1177.5 bits (3045), Expect = 0.0e+00
Identity = 585/635 (92.13%), Postives = 602/635 (94.80%), Query Frame = 0


Query: 1   MGFHVLRAPPFSSSTTIIFKPTSSASFLFKFGYALYSSPFSKSSSSTRTYFRASSAKYVA 60
           MGFHVLRAPP SSSTTI FKPTSS+SFLFKF Y LYS PFSKSSSS+ +YF  SS  YVA
Sbjct: 1   MGFHVLRAPPLSSSTTIFFKPTSSSSFLFKFRYPLYSPPFSKSSSSSISYFLPSSPNYVA 60

Query: 61  SPATAIPLSGSFSRRTRSFRGGFIAATAAPGSVHKSEELRPSISPEPSWVQRQNGTESLP 120
           SP TAI LSGSFSR TR FRGGFIAA  A GSV +SEELRPSIS E SWV  QNGTESLP
Sbjct: 61  SPTTAILLSGSFSRSTRRFRGGFIAAATASGSVQRSEELRPSISSEQSWVLGQNGTESLP 120

Query: 121 ASEVPLRGRIYHETYGCQMNINDMEVVLSIMKNAGYSETVDIPETAEIIFINTCAIRDNA 180
           AS+VPL GR+YHETYGCQMNINDMEVVLSIMK AGYSETVD PETAEIIFINTCAIRDNA
Sbjct: 121 ASDVPLSGRVYHETYGCQMNINDMEVVLSIMKKAGYSETVDTPETAEIIFINTCAIRDNA 180

Query: 181 EQKVWQRLNYFWFLKRHWKSNVAIGRSQSRHPPKVVVLGCMAERLKDKILDADKMVDVVC 240
           EQKVWQRLNYFWFLKR+WKSNVA GRSQSRHPPKVVVLGCMAERLKDKILD+DKMVDVVC
Sbjct: 181 EQKVWQRLNYFWFLKRNWKSNVATGRSQSRHPPKVVVLGCMAERLKDKILDSDKMVDVVC 240

Query: 241 GPDAYRDLPRLLDEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCS 300
           GPDAYRDLPRLLDEVDYGQKGINTLLSLEETYADISPVRI+KNSVTAFVSVMRGCNNMCS
Sbjct: 241 GPDAYRDLPRLLDEVDYGQKGINTLLSLEETYADISPVRIAKNSVTAFVSVMRGCNNMCS 300

Query: 301 FCIVPFTRGRERSRPVESIVCEVRELYKEGVKEVTLLGQNVNSYNDTTGNADVEPGTNWK 360
           FCIVPFTRGRERSRPVESIVCEVRELY+EGVKEVTLLGQNVNSYNDTT NAD+EPGTNWK
Sbjct: 301 FCIVPFTRGRERSRPVESIVCEVRELYREGVKEVTLLGQNVNSYNDTTENADIEPGTNWK 360

Query: 361 LSDGFSSIAKVKKMGLRFSDLLDRLSTEFPEMRFRYTSPHPKDFPDEFLYLMRDRHNICK 420
           LSDGFS+IAKVKKMGLRFSDLLDRLSTEFPEMRFRYTSPHPKDFPDEFLYLMRDRHNICK
Sbjct: 361 LSDGFSTIAKVKKMGLRFSDLLDRLSTEFPEMRFRYTSPHPKDFPDEFLYLMRDRHNICK 420

Query: 421 SIHLPAQSGNSTVLERMRRGYTREAYLDLVHKIRSIIPDVGITSDFICGFCGETEEEHAD 480
           SIHLPAQSGNS VLERMRRGYTREAYLDLVHKIRSIIPDVGITSDFICGFCGETEEEHAD
Sbjct: 421 SIHLPAQSGNSIVLERMRRGYTREAYLDLVHKIRSIIPDVGITSDFICGFCGETEEEHAD 480

Query: 481 TLSLINEVGYDMAYMFAYSMREKTHAHRNYVDDVPEEVKQRRLTELIETFRNSTGRCYDS 540
           TLSLINEVGYDMAYMFAYSMREKTHAHRNYVDD+PEEVKQRRLTELIE FRNSTGRCYDS
Sbjct: 481 TLSLINEVGYDMAYMFAYSMREKTHAHRNYVDDIPEEVKQRRLTELIEAFRNSTGRCYDS 540

Query: 541 QIGSVQLVLVEGPNKRAPETELIGKSDRGHRVSFVNVAVPHRDGDYDGQRKAVVGDFVEV 600
           QIGSVQLVLVEGPNKRAPETE+IGKSDR HRVSFVNVAVPHRDGDYDG RKA+VGDFVEV
Sbjct: 541 QIGSVQLVLVEGPNKRAPETEMIGKSDRSHRVSFVNVAVPHRDGDYDGHRKAMVGDFVEV 600

Query: 601 RISKSTRASLFGEALAITKLSSFFNSMDESIACVS 636
           RISKSTRASLFGEALAITKLSSF+N MDE IAC+S
Sbjct: 601 RISKSTRASLFGEALAITKLSSFYNGMDEPIACMS 635

[Close]

BLAST of Lcy05g016200 vs. ExPASy TrEMBL
Match: A0A6J1JMU5 (CDK5RAP1-like protein OS=Cucurbita maxima OX=3661 GN=LOC111486642 PE=3 SV=1)

HSP 1 Score: 1177.2 bits (3044), Expect = 0.0e+00
Identity = 585/635 (92.13%), Postives = 603/635 (94.96%), Query Frame = 0


Query: 1   MGFHVLRAPPFSSSTTIIFKPTSSASFLFKFGYALYSSPFSKSSSSTRTYFRASSAKYVA 60
           MG HVLRAPPFSSST+IIFKPTSSAS LFKFGYA ++SP     SSTRTYFR SS KYVA
Sbjct: 1   MGLHVLRAPPFSSSTSIIFKPTSSASLLFKFGYA-FNSP-----SSTRTYFRVSSLKYVA 60

Query: 61  SPATAIPLSGSFSRRTRSFRGGFIAATAAPGSVHKSEELRPSISPEPSWVQRQNGTESLP 120
           SP T+IPLSG FSRRTR F GGFIAATAAPGSV KSEELRPS+SP+ SWVQRQNG E L 
Sbjct: 61  SPPTSIPLSGYFSRRTRRFHGGFIAATAAPGSVKKSEELRPSVSPDQSWVQRQNGIEPLT 120

Query: 121 ASEVPLRGRIYHETYGCQMNINDMEVVLSIMKNAGYSETVDIPETAEIIFINTCAIRDNA 180
            SEVPLRGRIYHETYGCQMNINDMEVVLSIMKNAGYSETVD+PETAE+IFINTCAIRDNA
Sbjct: 121 GSEVPLRGRIYHETYGCQMNINDMEVVLSIMKNAGYSETVDVPETAEVIFINTCAIRDNA 180

Query: 181 EQKVWQRLNYFWFLKRHWKSNVAIGRSQSRHPPKVVVLGCMAERLKDKILDADKMVDVVC 240
           EQKVWQRLNYFWFLKR WKSNVAIGRSQSRHPPKVVVLGCMAERLKDKILDADKMVDVVC
Sbjct: 181 EQKVWQRLNYFWFLKREWKSNVAIGRSQSRHPPKVVVLGCMAERLKDKILDADKMVDVVC 240

Query: 241 GPDAYRDLPRLLDEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCS 300
           GPDAYRDLPRLLDEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCS
Sbjct: 241 GPDAYRDLPRLLDEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCS 300

Query: 301 FCIVPFTRGRERSRPVESIVCEVRELYKEGVKEVTLLGQNVNSYNDTTGNADVEPGTNWK 360
           FCIVPFTRGRERSRPVESIV EVRELY+EGVKEVTLLGQNVNSYND   N DVEPGTNWK
Sbjct: 301 FCIVPFTRGRERSRPVESIVSEVRELYREGVKEVTLLGQNVNSYNDIIDNTDVEPGTNWK 360

Query: 361 LSDGFSSIAKVKKMGLRFSDLLDRLSTEFPEMRFRYTSPHPKDFPDEFLYLMRDRHNICK 420
           LSDGFS+IAKVKKMGLRFSDLLDRLSTEFPEMRFRYTSPHPKDFPDEFLYLMRD+HNICK
Sbjct: 361 LSDGFSTIAKVKKMGLRFSDLLDRLSTEFPEMRFRYTSPHPKDFPDEFLYLMRDKHNICK 420

Query: 421 SIHLPAQSGNSTVLERMRRGYTREAYLDLVHKIRSIIPDVGITSDFICGFCGETEEEHAD 480
           SIHLPAQSGNSTVLERMRRGYTRE YLDLVHKIRSIIPDVGITSDFICGFCGETEEEHAD
Sbjct: 421 SIHLPAQSGNSTVLERMRRGYTREVYLDLVHKIRSIIPDVGITSDFICGFCGETEEEHAD 480

Query: 481 TLSLINEVGYDMAYMFAYSMREKTHAHRNYVDDVPEEVKQRRLTELIETFRNSTGRCYDS 540
           TLSLI EVGYDMAYMFAYSMREKTHAHRNYVDDVPEEVKQRRLTELIETFRNSTG+CYD 
Sbjct: 481 TLSLIKEVGYDMAYMFAYSMREKTHAHRNYVDDVPEEVKQRRLTELIETFRNSTGQCYDM 540

Query: 541 QIGSVQLVLVEGPNKRAPETELIGKSDRGHRVSFVNVAVPHRDGDYDGQRKAVVGDFVEV 600
           QIGS+QLVLVEGPNKRA ETE+IGKSDRGHRVSFVNVA+PHRDGDYDGQRK  +GDFVEV
Sbjct: 541 QIGSIQLVLVEGPNKRALETEMIGKSDRGHRVSFVNVAIPHRDGDYDGQRKVAIGDFVEV 600

Query: 601 RISKSTRASLFGEALAITKLSSFFNSMDESIACVS 636
           RISKSTRASLFGEALA+TKLSSF+NSMDESIACVS
Sbjct: 601 RISKSTRASLFGEALAVTKLSSFYNSMDESIACVS 629

[Close]

BLAST of Lcy05g016200 vs. NCBI nr
Match: XP_038887766.1 (CDK5RAP1-like protein isoform X2 [Benincasa hispida])

HSP 1 Score: 1222.6 bits (3162), Expect = 0.0e+00
Identity = 610/637 (95.76%), Postives = 625/637 (98.12%), Query Frame = 0


Query: 1   MGFHVLRAPPFSSSTTIIFKPTSSASFLFKFGYALYSSPFSK--SSSSTRTYFRASSAKY 60
           MGF+VLRAPPFSSSTTII KPTSSAS LFKFGYALYSSPFSK  SSSS+RTYFRASSA+Y
Sbjct: 1   MGFYVLRAPPFSSSTTIILKPTSSASLLFKFGYALYSSPFSKFSSSSSSRTYFRASSARY 60

Query: 61  VASPATAIPLSGSFSRRTRSFRGGFIAATAAPGSVHKSEELRPSISPEPSWVQRQNGTES 120
           VAS ATAIPLSGS  RRTRSFRGGFIAATAAPGSV+KSEEL+PSISPE  WVQR+NGTES
Sbjct: 61  VASTATAIPLSGSLPRRTRSFRGGFIAATAAPGSVYKSEELKPSISPEQPWVQRKNGTES 120

Query: 121 LPASEVPLRGRIYHETYGCQMNINDMEVVLSIMKNAGYSETVDIPETAEIIFINTCAIRD 180
           LPASEVPLRGRIYHETYGCQMNINDMEVVLSIMKNAGYSETVDIPETAEIIFINTCAIRD
Sbjct: 121 LPASEVPLRGRIYHETYGCQMNINDMEVVLSIMKNAGYSETVDIPETAEIIFINTCAIRD 180

Query: 181 NAEQKVWQRLNYFWFLKRHWKSNVAIGRSQSRHPPKVVVLGCMAERLKDKILDADKMVDV 240
           NAEQKVWQRLNYFWFLKR WKSNVAIGRS+S+HPPKVVVLGCMAERLKDKILDADKMVDV
Sbjct: 181 NAEQKVWQRLNYFWFLKRQWKSNVAIGRSKSQHPPKVVVLGCMAERLKDKILDADKMVDV 240

Query: 241 VCGPDAYRDLPRLLDEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNM 300
           VCGPDAYRDLPRLLDEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNM
Sbjct: 241 VCGPDAYRDLPRLLDEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNM 300

Query: 301 CSFCIVPFTRGRERSRPVESIVCEVRELYKEGVKEVTLLGQNVNSYNDTTGNADVEPGTN 360
           CSFCIVPFTRGRERSRPVESIVCEVRELY+EGVKEVTLLGQNVNSYNDT  NADVEPGTN
Sbjct: 301 CSFCIVPFTRGRERSRPVESIVCEVRELYREGVKEVTLLGQNVNSYNDTAENADVEPGTN 360

Query: 361 WKLSDGFSSIAKVKKMGLRFSDLLDRLSTEFPEMRFRYTSPHPKDFPDEFLYLMRDRHNI 420
           WKLSDGFS+IAKVKKMGLRFSDLLDRLSTEFPEMRFRYTSPHPKDFPDEFLYLMRDRHNI
Sbjct: 361 WKLSDGFSTIAKVKKMGLRFSDLLDRLSTEFPEMRFRYTSPHPKDFPDEFLYLMRDRHNI 420

Query: 421 CKSIHLPAQSGNSTVLERMRRGYTREAYLDLVHKIRSIIPDVGITSDFICGFCGETEEEH 480
           CKSIHLPAQSGNSTVLERMRRGYTREAYLDLVHKIRSIIPDVGITSDFICGFCGETEEEH
Sbjct: 421 CKSIHLPAQSGNSTVLERMRRGYTREAYLDLVHKIRSIIPDVGITSDFICGFCGETEEEH 480

Query: 481 ADTLSLINEVGYDMAYMFAYSMREKTHAHRNYVDDVPEEVKQRRLTELIETFRNSTGRCY 540
           ADTLSLI+EVGYDMAY+FAYSMREKTHAHRNYVDDVPEEVKQRRLTELIETFRNSTGRCY
Sbjct: 481 ADTLSLISEVGYDMAYLFAYSMREKTHAHRNYVDDVPEEVKQRRLTELIETFRNSTGRCY 540

Query: 541 DSQIGSVQLVLVEGPNKRAPETELIGKSDRGHRVSFVNVAVPHRDGDYDGQRKAVVGDFV 600
           DSQIGSVQLVLVEGPNKRAPETE+IGKSDRGHRVSF+NVAVPHRDGDYDGQRKAVVGDFV
Sbjct: 541 DSQIGSVQLVLVEGPNKRAPETEMIGKSDRGHRVSFINVAVPHRDGDYDGQRKAVVGDFV 600

Query: 601 EVRISKSTRASLFGEALAITKLSSFFNSMDESIACVS 636
           EVRISKSTRASLFGEALAITKLSSF+NSMDESIACVS
Sbjct: 601 EVRISKSTRASLFGEALAITKLSSFYNSMDESIACVS 637

[Close]

BLAST of Lcy05g016200 vs. NCBI nr
Match: XP_038887765.1 (CDK5RAP1-like protein isoform X1 [Benincasa hispida])

HSP 1 Score: 1211.8 bits (3134), Expect = 0.0e+00
Identity = 610/654 (93.27%), Postives = 625/654 (95.57%), Query Frame = 0


Query: 1   MGFHVLRAPPFSSSTTIIFKPTSSASFLFKFGYALYSSPFSK--SSSSTRTYFRASSAKY 60
           MGF+VLRAPPFSSSTTII KPTSSAS LFKFGYALYSSPFSK  SSSS+RTYFRASSA+Y
Sbjct: 1   MGFYVLRAPPFSSSTTIILKPTSSASLLFKFGYALYSSPFSKFSSSSSSRTYFRASSARY 60

Query: 61  VASPATAIPLSGSFSRRTRSFRGGFIAATAAPGSVHKSEELRPSISPEPSWVQRQNGTE- 120
           VAS ATAIPLSGS  RRTRSFRGGFIAATAAPGSV+KSEEL+PSISPE  WVQR+NGTE 
Sbjct: 61  VASTATAIPLSGSLPRRTRSFRGGFIAATAAPGSVYKSEELKPSISPEQPWVQRKNGTES 120

Query: 121 ----------------SLPASEVPLRGRIYHETYGCQMNINDMEVVLSIMKNAGYSETVD 180
                           SLPASEVPLRGRIYHETYGCQMNINDMEVVLSIMKNAGYSETVD
Sbjct: 121 SACLVEIGSQLRLIGRSLPASEVPLRGRIYHETYGCQMNINDMEVVLSIMKNAGYSETVD 180

Query: 181 IPETAEIIFINTCAIRDNAEQKVWQRLNYFWFLKRHWKSNVAIGRSQSRHPPKVVVLGCM 240
           IPETAEIIFINTCAIRDNAEQKVWQRLNYFWFLKR WKSNVAIGRS+S+HPPKVVVLGCM
Sbjct: 181 IPETAEIIFINTCAIRDNAEQKVWQRLNYFWFLKRQWKSNVAIGRSKSQHPPKVVVLGCM 240

Query: 241 AERLKDKILDADKMVDVVCGPDAYRDLPRLLDEVDYGQKGINTLLSLEETYADISPVRIS 300
           AERLKDKILDADKMVDVVCGPDAYRDLPRLLDEVDYGQKGINTLLSLEETYADISPVRIS
Sbjct: 241 AERLKDKILDADKMVDVVCGPDAYRDLPRLLDEVDYGQKGINTLLSLEETYADISPVRIS 300

Query: 301 KNSVTAFVSVMRGCNNMCSFCIVPFTRGRERSRPVESIVCEVRELYKEGVKEVTLLGQNV 360
           KNSVTAFVSVMRGCNNMCSFCIVPFTRGRERSRPVESIVCEVRELY+EGVKEVTLLGQNV
Sbjct: 301 KNSVTAFVSVMRGCNNMCSFCIVPFTRGRERSRPVESIVCEVRELYREGVKEVTLLGQNV 360

Query: 361 NSYNDTTGNADVEPGTNWKLSDGFSSIAKVKKMGLRFSDLLDRLSTEFPEMRFRYTSPHP 420
           NSYNDT  NADVEPGTNWKLSDGFS+IAKVKKMGLRFSDLLDRLSTEFPEMRFRYTSPHP
Sbjct: 361 NSYNDTAENADVEPGTNWKLSDGFSTIAKVKKMGLRFSDLLDRLSTEFPEMRFRYTSPHP 420

Query: 421 KDFPDEFLYLMRDRHNICKSIHLPAQSGNSTVLERMRRGYTREAYLDLVHKIRSIIPDVG 480
           KDFPDEFLYLMRDRHNICKSIHLPAQSGNSTVLERMRRGYTREAYLDLVHKIRSIIPDVG
Sbjct: 421 KDFPDEFLYLMRDRHNICKSIHLPAQSGNSTVLERMRRGYTREAYLDLVHKIRSIIPDVG 480

Query: 481 ITSDFICGFCGETEEEHADTLSLINEVGYDMAYMFAYSMREKTHAHRNYVDDVPEEVKQR 540
           ITSDFICGFCGETEEEHADTLSLI+EVGYDMAY+FAYSMREKTHAHRNYVDDVPEEVKQR
Sbjct: 481 ITSDFICGFCGETEEEHADTLSLISEVGYDMAYLFAYSMREKTHAHRNYVDDVPEEVKQR 540

Query: 541 RLTELIETFRNSTGRCYDSQIGSVQLVLVEGPNKRAPETELIGKSDRGHRVSFVNVAVPH 600
           RLTELIETFRNSTGRCYDSQIGSVQLVLVEGPNKRAPETE+IGKSDRGHRVSF+NVAVPH
Sbjct: 541 RLTELIETFRNSTGRCYDSQIGSVQLVLVEGPNKRAPETEMIGKSDRGHRVSFINVAVPH 600

Query: 601 RDGDYDGQRKAVVGDFVEVRISKSTRASLFGEALAITKLSSFFNSMDESIACVS 636
           RDGDYDGQRKAVVGDFVEVRISKSTRASLFGEALAITKLSSF+NSMDESIACVS
Sbjct: 601 RDGDYDGQRKAVVGDFVEVRISKSTRASLFGEALAITKLSSFYNSMDESIACVS 654

[Close]

BLAST of Lcy05g016200 vs. NCBI nr
Match: XP_008449427.1 (PREDICTED: CDK5RAP1-like protein [Cucumis melo] >KAA0057321.1 CDK5RAP1-like protein [Cucumis melo var. makuwa] >TYK13413.1 CDK5RAP1-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 1182.9 bits (3059), Expect = 0.0e+00
Identity = 590/635 (92.91%), Postives = 604/635 (95.12%), Query Frame = 0


Query: 1   MGFHVLRAPPFSSSTTIIFKPTSSASFLFKFGYALYSSPFSKSSSSTRTYFRASSAKYVA 60
           MGFHVLRAPPFSSSTTIIFKPTSS   LFKF YALYS PFSKSSSS+ +YF  SS  YVA
Sbjct: 1   MGFHVLRAPPFSSSTTIIFKPTSS---LFKFRYALYSPPFSKSSSSSISYFLPSSPNYVA 60

Query: 61  SPATAIPLSGSFSRRTRSFRGGFIAATAAPGSVHKSEELRPSISPEPSWVQRQNGTESLP 120
           SP TAIPLSGSFSR TR FRGGFIAAT A GSV + EELRPSIS E SWV RQNGTESLP
Sbjct: 61  SPTTAIPLSGSFSRSTRRFRGGFIAATTASGSVQRLEELRPSISTEQSWVLRQNGTESLP 120

Query: 121 ASEVPLRGRIYHETYGCQMNINDMEVVLSIMKNAGYSETVDIPETAEIIFINTCAIRDNA 180
           AS+VP RGR+YHETYGCQMNINDMEVVLSIMK AGY ETVD PETAEIIFINTCAIRDNA
Sbjct: 121 ASDVPSRGRVYHETYGCQMNINDMEVVLSIMKKAGYGETVDTPETAEIIFINTCAIRDNA 180

Query: 181 EQKVWQRLNYFWFLKRHWKSNVAIGRSQSRHPPKVVVLGCMAERLKDKILDADKMVDVVC 240
           EQKVWQRLNYFWFLKR WKSNVAIGRSQSRHPPKVVVLGCMAERLKDKILD+DKMVDVVC
Sbjct: 181 EQKVWQRLNYFWFLKRQWKSNVAIGRSQSRHPPKVVVLGCMAERLKDKILDSDKMVDVVC 240

Query: 241 GPDAYRDLPRLLDEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCS 300
           GPDAYRDLPRLLDEVDYGQKGINTLLSLEETYADISPVRI+KNSVTAFVSVMRGCNNMCS
Sbjct: 241 GPDAYRDLPRLLDEVDYGQKGINTLLSLEETYADISPVRIAKNSVTAFVSVMRGCNNMCS 300

Query: 301 FCIVPFTRGRERSRPVESIVCEVRELYKEGVKEVTLLGQNVNSYNDTTGNADVEPGTNWK 360
           FCIVPFTRGRERSRPVESIVCEV+ELY+EGVKEVTLLGQNVNSYNDTT NAD+EPGTNWK
Sbjct: 301 FCIVPFTRGRERSRPVESIVCEVKELYREGVKEVTLLGQNVNSYNDTTENADIEPGTNWK 360

Query: 361 LSDGFSSIAKVKKMGLRFSDLLDRLSTEFPEMRFRYTSPHPKDFPDEFLYLMRDRHNICK 420
           LSDGFS+IAKVKKMGLRFSDLLDRLSTEFPEMRFRYTSPHPKDFPDEFLYLMRDRHNICK
Sbjct: 361 LSDGFSTIAKVKKMGLRFSDLLDRLSTEFPEMRFRYTSPHPKDFPDEFLYLMRDRHNICK 420

Query: 421 SIHLPAQSGNSTVLERMRRGYTREAYLDLVHKIRSIIPDVGITSDFICGFCGETEEEHAD 480
           SIHLPAQSGNS VLERMRRGYTREAYLDLVHKIRSIIPDVGITSDFICGFCGETEEEHAD
Sbjct: 421 SIHLPAQSGNSIVLERMRRGYTREAYLDLVHKIRSIIPDVGITSDFICGFCGETEEEHAD 480

Query: 481 TLSLINEVGYDMAYMFAYSMREKTHAHRNYVDDVPEEVKQRRLTELIETFRNSTGRCYDS 540
           TLSLINEVGYDMAYMFAYSMREKTHAHRNYVDD+PEEVKQRRLTELIE FRNSTGRCYDS
Sbjct: 481 TLSLINEVGYDMAYMFAYSMREKTHAHRNYVDDIPEEVKQRRLTELIEAFRNSTGRCYDS 540

Query: 541 QIGSVQLVLVEGPNKRAPETELIGKSDRGHRVSFVNVAVPHRDGDYDGQRKAVVGDFVEV 600
           QIGSVQLVLVEGPNKRAPETE+IGKSDR HRVSFVNVAVPHRDGDYDG RKAVVGDFVEV
Sbjct: 541 QIGSVQLVLVEGPNKRAPETEMIGKSDRSHRVSFVNVAVPHRDGDYDGHRKAVVGDFVEV 600

Query: 601 RISKSTRASLFGEALAITKLSSFFNSMDESIACVS 636
           RISKSTRASLFGEALAITKLSSF+N MDESIACVS
Sbjct: 601 RISKSTRASLFGEALAITKLSSFYNRMDESIACVS 632

[Close]

BLAST of Lcy05g016200 vs. NCBI nr
Match: XP_022927671.1 (CDK5RAP1-like protein [Cucurbita moschata])

HSP 1 Score: 1180.6 bits (3053), Expect = 0.0e+00
Identity = 586/635 (92.28%), Postives = 603/635 (94.96%), Query Frame = 0


Query: 1   MGFHVLRAPPFSSSTTIIFKPTSSASFLFKFGYALYSSPFSKSSSSTRTYFRASSAKYVA 60
           MG HVL +PPFSSST+IIFKPTSSAS LFKFGYAL     SKS SST TY R SS KYVA
Sbjct: 1   MGLHVLISPPFSSSTSIIFKPTSSASLLFKFGYAL-----SKSPSSTTTYLRPSSLKYVA 60

Query: 61  SPATAIPLSGSFSRRTRSFRGGFIAATAAPGSVHKSEELRPSISPEPSWVQRQNGTESLP 120
           SP T+IPLSG FSRRTR F GGFIAATAAPGSV KSEELRPS+SP+ SWVQRQNG E L 
Sbjct: 61  SPPTSIPLSGYFSRRTRRFHGGFIAATAAPGSVQKSEELRPSVSPDQSWVQRQNGIEPLT 120

Query: 121 ASEVPLRGRIYHETYGCQMNINDMEVVLSIMKNAGYSETVDIPETAEIIFINTCAIRDNA 180
            SEVPLRGRIYHETYGCQMNINDMEVVLSIMKNAGYSETVD+PETAE+IFINTCAIRDNA
Sbjct: 121 GSEVPLRGRIYHETYGCQMNINDMEVVLSIMKNAGYSETVDVPETAEVIFINTCAIRDNA 180

Query: 181 EQKVWQRLNYFWFLKRHWKSNVAIGRSQSRHPPKVVVLGCMAERLKDKILDADKMVDVVC 240
           EQKVWQRLNYFWFLKR WKSNVAIGRSQSRHPPKVVVLGCMAERLKDKILDADKMVDVVC
Sbjct: 181 EQKVWQRLNYFWFLKREWKSNVAIGRSQSRHPPKVVVLGCMAERLKDKILDADKMVDVVC 240

Query: 241 GPDAYRDLPRLLDEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCS 300
           GPDAYRDLPRLLDEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCS
Sbjct: 241 GPDAYRDLPRLLDEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCS 300

Query: 301 FCIVPFTRGRERSRPVESIVCEVRELYKEGVKEVTLLGQNVNSYNDTTGNADVEPGTNWK 360
           FCIVPFTRGRERSRPVESIV EVRELY+EGVKEVTLLGQNVNSYNDT  N DVEPGTNWK
Sbjct: 301 FCIVPFTRGRERSRPVESIVSEVRELYREGVKEVTLLGQNVNSYNDTIDNTDVEPGTNWK 360

Query: 361 LSDGFSSIAKVKKMGLRFSDLLDRLSTEFPEMRFRYTSPHPKDFPDEFLYLMRDRHNICK 420
           LSDGFS+IAKVKKMGLRFSDLLDRLSTEFPEMRFRYTSPHPKDFPDEFLYLMRD+HNICK
Sbjct: 361 LSDGFSTIAKVKKMGLRFSDLLDRLSTEFPEMRFRYTSPHPKDFPDEFLYLMRDKHNICK 420

Query: 421 SIHLPAQSGNSTVLERMRRGYTREAYLDLVHKIRSIIPDVGITSDFICGFCGETEEEHAD 480
           SIHLPAQSGNSTVLERMRRGYTRE YLDLVHKIRSIIPDVGITSDFICGFCGETEEEHAD
Sbjct: 421 SIHLPAQSGNSTVLERMRRGYTREVYLDLVHKIRSIIPDVGITSDFICGFCGETEEEHAD 480

Query: 481 TLSLINEVGYDMAYMFAYSMREKTHAHRNYVDDVPEEVKQRRLTELIETFRNSTGRCYDS 540
           TLSLINEVGYDMAYMFAYSMREKTHAHRNYVDDVPE+VKQRRLTELIETFRNSTG+CYD 
Sbjct: 481 TLSLINEVGYDMAYMFAYSMREKTHAHRNYVDDVPEDVKQRRLTELIETFRNSTGQCYDM 540

Query: 541 QIGSVQLVLVEGPNKRAPETELIGKSDRGHRVSFVNVAVPHRDGDYDGQRKAVVGDFVEV 600
           QIGS+QLVLVEGPNKRAPETE+IGKSDRGHRVSFVNVAVPHRDGDYDGQRK  +GDFVEV
Sbjct: 541 QIGSIQLVLVEGPNKRAPETEMIGKSDRGHRVSFVNVAVPHRDGDYDGQRKVAIGDFVEV 600

Query: 601 RISKSTRASLFGEALAITKLSSFFNSMDESIACVS 636
           RISKSTRASLFGEALA+TKLSSF+NSMDESIACVS
Sbjct: 601 RISKSTRASLFGEALAVTKLSSFYNSMDESIACVS 630

[Close]

BLAST of Lcy05g016200 vs. NCBI nr
Match: XP_023529365.1 (CDK5RAP1-like protein [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1177.9 bits (3046), Expect = 0.0e+00
Identity = 585/635 (92.13%), Postives = 601/635 (94.65%), Query Frame = 0


Query: 1   MGFHVLRAPPFSSSTTIIFKPTSSASFLFKFGYALYSSPFSKSSSSTRTYFRASSAKYVA 60
           MG HVL APPFSSST+IIFKPTSSAS LFKFGYAL     SKS SST TY R+SS KYVA
Sbjct: 1   MGLHVLIAPPFSSSTSIIFKPTSSASLLFKFGYAL-----SKSPSSTTTYLRSSSLKYVA 60

Query: 61  SPATAIPLSGSFSRRTRSFRGGFIAATAAPGSVHKSEELRPSISPEPSWVQRQNGTESLP 120
           SP T++PLSG FSRRTR F GGFIAATAAPGSV KSEELRPS+SP+ SWVQRQNG E L 
Sbjct: 61  SPPTSLPLSGYFSRRTRRFHGGFIAATAAPGSVQKSEELRPSVSPDQSWVQRQNGIEPLT 120

Query: 121 ASEVPLRGRIYHETYGCQMNINDMEVVLSIMKNAGYSETVDIPETAEIIFINTCAIRDNA 180
            SEVPLRGRIYHETYGCQMNINDMEVVLSIMKNAGYSETVD+PETAE+IFINTCAIRDNA
Sbjct: 121 GSEVPLRGRIYHETYGCQMNINDMEVVLSIMKNAGYSETVDVPETAEVIFINTCAIRDNA 180

Query: 181 EQKVWQRLNYFWFLKRHWKSNVAIGRSQSRHPPKVVVLGCMAERLKDKILDADKMVDVVC 240
           EQKVWQRLNYFWFLKR WK NVAIGRSQSRHPPKVVVLGCMAERLKDKILDADKMVDVVC
Sbjct: 181 EQKVWQRLNYFWFLKREWKGNVAIGRSQSRHPPKVVVLGCMAERLKDKILDADKMVDVVC 240

Query: 241 GPDAYRDLPRLLDEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCS 300
           GPDAYRDLPRLLDEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCS
Sbjct: 241 GPDAYRDLPRLLDEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCS 300

Query: 301 FCIVPFTRGRERSRPVESIVCEVRELYKEGVKEVTLLGQNVNSYNDTTGNADVEPGTNWK 360
           FCIVPFTRGRERSRPVESIV EVRELY+EGVKEVTLLGQNVNSYNDT  N DVEPGTNWK
Sbjct: 301 FCIVPFTRGRERSRPVESIVSEVRELYREGVKEVTLLGQNVNSYNDTIDNTDVEPGTNWK 360

Query: 361 LSDGFSSIAKVKKMGLRFSDLLDRLSTEFPEMRFRYTSPHPKDFPDEFLYLMRDRHNICK 420
           LSDGFS+IAKVKKMGLRFSDLLDRLSTEFPEMRFRYTSPHPKDFPDEFLYLMRD+HNICK
Sbjct: 361 LSDGFSTIAKVKKMGLRFSDLLDRLSTEFPEMRFRYTSPHPKDFPDEFLYLMRDKHNICK 420

Query: 421 SIHLPAQSGNSTVLERMRRGYTREAYLDLVHKIRSIIPDVGITSDFICGFCGETEEEHAD 480
           SIHLPAQSGNSTVLERMRRGYTRE YLDLVHKIRSIIPDVGITSDFICGFCGETEEEHAD
Sbjct: 421 SIHLPAQSGNSTVLERMRRGYTREVYLDLVHKIRSIIPDVGITSDFICGFCGETEEEHAD 480

Query: 481 TLSLINEVGYDMAYMFAYSMREKTHAHRNYVDDVPEEVKQRRLTELIETFRNSTGRCYDS 540
           TLSLINEVGYDMAYMFAYSMREKTHAHRNYVDDVPEEVKQRRLTELIETFRNSTG+CYD 
Sbjct: 481 TLSLINEVGYDMAYMFAYSMREKTHAHRNYVDDVPEEVKQRRLTELIETFRNSTGQCYDM 540

Query: 541 QIGSVQLVLVEGPNKRAPETELIGKSDRGHRVSFVNVAVPHRDGDYDGQRKAVVGDFVEV 600
           QIGS+QLVLVEGPNKRAPETE+IGKSDRGHRVSFVNVAVPHRDGDYDG RK   GDFVEV
Sbjct: 541 QIGSIQLVLVEGPNKRAPETEMIGKSDRGHRVSFVNVAVPHRDGDYDGHRKVAFGDFVEV 600

Query: 601 RISKSTRASLFGEALAITKLSSFFNSMDESIACVS 636
           RISKSTRASLFGEALA+TKLSSF+NSMDESIACVS
Sbjct: 601 RISKSTRASLFGEALAVTKLSSFYNSMDESIACVS 630

[Close]

BLAST of Lcy05g016200 vs. TAIR 10
Match: AT4G36390.1 (Methylthiotransferase )

HSP 1 Score: 830.1 bits (2143), Expect = 1.2e-240
Identity = 429/617 (69.53%), Postives = 491/617 (79.58%), Query Frame = 0


Query: 16  TIIFKPTSSASFLFKFGYALYSSPFSKSSSSTRTYFRASSAKYVASPAT-----AIPLSG 75
           ++ FK ++   F  +F  +  +   S SSS+     R+S+ +    P       ++ LS 
Sbjct: 20  SLCFKASTQRCFALRFLSSKATHASSSSSSALLPRCRSSTHRLTQKPINRKKGFSLNLSR 79

Query: 76  SFSRRTRSFRGGFIAATAAPGSVHKSEELRPSISPEPSWVQRQNGTESLPASEVPLRGRI 135
           SFS    +  G F        S+H   +   +     S    +  +ES   S++  +GRI
Sbjct: 80  SFSISQIASSGKFDGP-----SLH---QFVSNAQAHASLTTPETESESTLDSDIASKGRI 139

Query: 136 YHETYGCQMNINDMEVVLSIMKNAGYSETVDIPETAEIIFINTCAIRDNAEQKVWQRLNY 195
           YHETYGCQMNINDME+VL+IMKN+GY E V  PE+AE+IF+NTCAIR+NAEQ+VWQRLNY
Sbjct: 140 YHETYGCQMNINDMEIVLAIMKNSGYKEVVTDPESAEVIFVNTCAIRENAEQRVWQRLNY 199

Query: 196 FWFLKRHWKSNVAIGRSQSRHPPKVVVLGCMAERLKDKILDADKMVDVVCGPDAYRDLPR 255
           FWFLKR WK N A GR++S  PPKVVVLGCMAERLKDKILD+DKMVDVVCGPDAYRDLPR
Sbjct: 200 FWFLKREWKVNAATGRAKSLKPPKVVVLGCMAERLKDKILDSDKMVDVVCGPDAYRDLPR 259

Query: 256 LLDEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRGR 315
           LL+EVDYGQKGINTLLSLEETYADISPVRIS+NS+TAFVSVMRGCNNMC+FCIVPFTRGR
Sbjct: 260 LLEEVDYGQKGINTLLSLEETYADISPVRISENSITAFVSVMRGCNNMCAFCIVPFTRGR 319

Query: 316 ERSRPVESIVCEVRELYKEGVKEVTLLGQNVNSYNDTTGNADVEPGTNWKLSDGFSSIAK 375
           ERSRPVESI+ EV EL++ GVKEVTLLGQNVNSYND   +AD E G NW+ S+GFSS  K
Sbjct: 320 ERSRPVESIIREVGELWESGVKEVTLLGQNVNSYND--DSADRESGANWEYSEGFSSRCK 379

Query: 376 VKKMGLRFSDLLDRLSTEFPEMRFRYTSPHPKDFPDEFLYLMRDRHNICKSIHLPAQSGN 435
           VK MGLRF+DLLDRLS EFPEMRFR+TSPHPKD+PDE LYLMRDRHNIC  IHLPAQSGN
Sbjct: 380 VKNMGLRFADLLDRLSVEFPEMRFRFTSPHPKDYPDELLYLMRDRHNICNLIHLPAQSGN 439

Query: 436 STVLERMRRGYTREAYLDLVHKIRSIIPDVGITSDFICGFCGETEEEHADTLSLINEVGY 495
           S +LE+MRRGYTREAYLDLV KIRSIIPDV ITSDFI GFCGETEEEH +TLSL+  VGY
Sbjct: 440 SRILEQMRRGYTREAYLDLVKKIRSIIPDVAITSDFITGFCGETEEEHQETLSLVRAVGY 499

Query: 496 DMAYMFAYSMREKTHAHRNYVDDVPEEVKQRRLTELIETFRNSTGRCYDSQIGSVQLVLV 555
           DMAYMFAYSMREKTHAHRNY DDVPEEVKQRRLTELI+ FR +TG CYDSQ+GS QLVLV
Sbjct: 500 DMAYMFAYSMREKTHAHRNYTDDVPEEVKQRRLTELIDAFRETTGPCYDSQVGSTQLVLV 559

Query: 556 EGPNKRAPETELIGKSDRGHRVSFVNVAVPHR----DGDYDGQRKAVVGDFVEVRISKST 615
           EGPNKRAPETELIGK+D+GHRVSFV   +  +    DGD D +R   +GDFVEV+I KST
Sbjct: 560 EGPNKRAPETELIGKTDKGHRVSFVTKPLFDKACLLDGD-DLKRNPGIGDFVEVQIEKST 619

Query: 616 RASLFGEALAITKLSSF 624
           RASLFGEALAI+K+S F
Sbjct: 620 RASLFGEALAISKMSLF 625

[Close]

BLAST of Lcy05g016200 vs. TAIR 10
Match: AT1G72090.1 (Methylthiotransferase )

HSP 1 Score: 146.4 bits (368), Expect = 8.0e-35
Identity = 130/528 (24.62%), Postives = 227/528 (42.99%), Query Frame = 0


Query: 103 ISPEPSWVQRQNGTESLPAS-EVPLRGRIYHETYGCQMNINDMEVVLSIMKNAGYSETVD 162
           IS +P  +   N     P S ++P    IY +T+GC  N +D E +   +   GY+ T +
Sbjct: 38  ISSKPDQITASNRDSLAPPSMKIPGTQTIYIKTFGCSHNQSDSEYMAGQLSAFGYALT-E 97

Query: 163 IPETAEIIFINTCAIRDNAEQKVWQRLNYFWFLKRHWKSNVAIGRSQSRHPPKVVVLGCM 222
           +PE A++  INTC ++  ++  +                +  I R +S   P +V+ GC+
Sbjct: 98  VPEEADLWLINTCTVKSPSQSAM----------------STLITRGRSGKKP-LVIAGCV 157

Query: 223 AERLKD-KILDADKMVDVVCGPDAYRDLPRLLDEVDYGQKGINTLLSLEETYADISPVRI 282
            +  +D K L+   +V V       + + R+++ V+   KG    L   +T   +   ++
Sbjct: 158 PQGSRDLKELEGVSVVGV-------QQIDRVVEIVEETLKGHEVRLLTRKTLPALDLPKV 217

Query: 283 SKNSVTAFVSVMRGCNNMCSFCIVPFTRGRERSRPVESIVCEVRELYKEGVKEVTLLGQN 342
            +N+    + +  GC   C++C     RG   S  V+S+V  VR +  EGVKE+ L  ++
Sbjct: 218 RRNNFIEILPINVGCLGACTYCKTKHARGHLGSYTVDSLVERVRTVISEGVKEIWLSSED 277

Query: 343 VNSYNDTTGNADVEPGTNWKLSDGFSSIAKVKKMGLRFSDLLDRLSTEFPE-----MRFR 402
             +Y                           + +G+    LL+ +  E P      +R  
Sbjct: 278 TGAYG--------------------------RDIGVNLPILLNAIVKELPSDQSTMLRIG 337

Query: 403 YTSP-----HPKDFPDEFLYLMRDRHN-ICKSIHLPAQSGNSTVLERMRRGYTREAYLDL 462
            T+P     H K+           RH  +   +H+P QSG+ +VL  M R YT   +  +
Sbjct: 338 MTNPPFILEHLKEIAAVL------RHPCVYTFLHVPVQSGSDSVLTAMNREYTASEFRTV 397

Query: 463 VHKIRSIIPDVGITSDFICGFCGETEEEHADTLSLINEVGYDMAYMFAYSMREKTHAHR- 522
           V  +  ++P + I +D ICGF GET+E+ + T+ LI +  +   ++  +  R  T A + 
Sbjct: 398 VDTLTELVPGMQIATDIICGFPGETDEDFSQTVELIKDYKFPQVHISQFYPRPGTPAAKM 457

Query: 523 NYVDDVPEEVKQRRLTELIETFRNSTG-RCYDSQIGSVQLVLVEGPNKRAPETELIGKSD 582
             V     + + R LT + E F   TG  C + +I   + V  +G         L+    
Sbjct: 458 KKVQSKIVKQRSRELTSVFEAFAPYTGMECREERIWITE-VATDG-------IHLV---- 487

Query: 583 RGHRVSFVNVAVPHRDGDYDGQRKAVVGDFVEVRISKSTRASLFGEAL 616
            GH   +V V V   +        +++G     RI+   R S+FGE +
Sbjct: 518 -GHTKGYVQVLVTGPE--------SMLGTSAMARITSVGRWSVFGEVI 487

The following BLAST results are available for this feature:

BLAST of Lcy05g016200 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8H0V1	1.7e-239	69.53	CDK5RAP1-like protein OS=Arabidopsis thaliana OX=3702 GN=At4g36390 PE=2 SV=1	[more]
Q2R1U4	1.7e-239	75.65	CDK5RAP1-like protein OS=Oryza sativa subsp. japonica OX=39947 GN=Os11g0592800 P...	[more]
Q9JLH6	9.3e-145	51.28	Mitochondrial tRNA methylthiotransferase CDK5RAP1 OS=Rattus norvegicus OX=10116 ...	[more]
Q8BTW8	1.3e-143	51.51	Mitochondrial tRNA methylthiotransferase CDK5RAP1 OS=Mus musculus OX=10090 GN=Cd...	[more]
Q9VGZ1	1.5e-142	52.02	CDK5RAP1-like protein OS=Drosophila melanogaster OX=7227 GN=CG6345 PE=2 SV=1	[more]

BLAST of Lcy05g016200 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CNB2	0.0e+00	92.91	CDK5RAP1-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold49...	[more]
A0A1S3BLE1	0.0e+00	92.91	CDK5RAP1-like protein OS=Cucumis melo OX=3656 GN=LOC103491318 PE=3 SV=1	[more]
A0A6J1EIA8	0.0e+00	92.28	CDK5RAP1-like protein OS=Cucurbita moschata OX=3662 GN=LOC111434491 PE=3 SV=1	[more]
A0A0A0KDY2	0.0e+00	92.13	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G411190 PE=3 SV=1	[more]
A0A6J1JMU5	0.0e+00	92.13	CDK5RAP1-like protein OS=Cucurbita maxima OX=3661 GN=LOC111486642 PE=3 SV=1	[more]

BLAST of Lcy05g016200 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038887766.1	0.0e+00	95.76	CDK5RAP1-like protein isoform X2 [Benincasa hispida]	[more]
XP_038887765.1	0.0e+00	93.27	CDK5RAP1-like protein isoform X1 [Benincasa hispida]	[more]
XP_008449427.1	0.0e+00	92.91	PREDICTED: CDK5RAP1-like protein [Cucumis melo] >KAA0057321.1 CDK5RAP1-like prot...	[more]
XP_022927671.1	0.0e+00	92.28	CDK5RAP1-like protein [Cucurbita moschata]	[more]
XP_023529365.1	0.0e+00	92.13	CDK5RAP1-like protein [Cucurbita pepo subsp. pepo]	[more]

BLAST of Lcy05g016200 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G36390.1	1.2e-240	69.53	Methylthiotransferase	[more]
AT1G72090.1	8.0e-35	24.62	Methylthiotransferase	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006638	Elp3/MiaB/NifB	SMART	SM00729	MiaB	coord: 285..525 e-value: 4.2E-53 score: 192.4
None	No IPR available	TIGRFAM	TIGR01574	TIGR01574	coord: 130..613 e-value: 2.3E-116 score: 387.4
None	No IPR available	PIRSR	PIRSR000167-1	PIRSR000167-1	coord: 423..513 e-value: 0.0011 score: 15.7
None	No IPR available	SFLD	SFLDF00413	CDK5RAP1	coord: 128..620 e-value: 0.0 score: 680.9
None	No IPR available	SFLD	SFLDG01082	B12-binding_domain_containing	coord: 202..507 e-value: 8.2E-28 score: 91.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 95..115
None	No IPR available	PANTHER	PTHR43020	CDK5 REGULATORY SUBUNIT-ASSOCIATED PROTEIN 1	coord: 110..626
None	No IPR available	CDD	cd01335	Radical_SAM	coord: 293..518 e-value: 3.48434E-8 score: 52.3357
None	No IPR available	SUPERFAMILY	102114	Radical SAM enzymes	coord: 279..532
IPR013848	Methylthiotransferase, N-terminal	PFAM	PF00919	UPF0004	coord: 129..241 e-value: 4.4E-30 score: 103.6
IPR013848	Methylthiotransferase, N-terminal	PROSITE	PS51449	MTTASE_N	coord: 128..257 score: 37.475998
IPR023404	Radical SAM, alpha/beta horseshoe	GENE3D	3.80.30.20	tm_1862 like domain	coord: 283..539 e-value: 1.5E-82 score: 278.6
IPR002792	TRAM domain	PFAM	PF01938	TRAM	coord: 539..615 e-value: 5.2E-14 score: 52.0
IPR002792	TRAM domain	PROSITE	PS50926	TRAM	coord: 539..616 score: 14.567984
IPR005839	Methylthiotransferase	TIGRFAM	TIGR00089	TIGR00089	coord: 129..612 e-value: 2.4E-113 score: 377.1
IPR005839	Methylthiotransferase	SFLD	SFLDG01061	methylthiotransferase	coord: 128..620 e-value: 0.0 score: 680.9
IPR038135	Methylthiotransferase, N-terminal domain superfamily	GENE3D	3.40.50.12160		coord: 129..270 e-value: 2.3E-38 score: 132.8
IPR007197	Radical SAM	PFAM	PF04055	Radical_SAM	coord: 289..485 e-value: 1.2E-34 score: 120.1
IPR007197	Radical SAM	PROSITE	PS51918	RADICAL_SAM	coord: 281..536 score: 35.257664
IPR006463	tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB	SFLD	SFLDF00273	(dimethylallyl)adenosine_tRNA	coord: 129..616 e-value: 0.0 score: 540.0
IPR020612	Methylthiotransferase, conserved site	PROSITE	PS01278	MTTASE_RADICAL	coord: 289..309

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy05g016200.1	Lcy05g016200.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045736	negative regulation of cyclin-dependent protein serine/threonine kinase activity
biological_process	GO:0035600	tRNA methylthiolation
biological_process	GO:0006400	tRNA modification
cellular_component	GO:0005829	cytosol
cellular_component	GO:0005739	mitochondrion
molecular_function	GO:0051539	4 iron, 4 sulfur cluster binding
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0035597	N6-isopentenyladenosine methylthiotransferase activity
molecular_function	GO:0003824	catalytic activity
molecular_function	GO:0051536	iron-sulfur cluster binding
molecular_function	GO:0035596	methylthiotransferase activity
molecular_function	GO:0016740	transferase activity