Homology
BLAST of Lcy05g015280 vs. ExPASy Swiss-Prot
Match:
O04590 (Pentatricopeptide repeat-containing protein At1g62260, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-E10 PE=2 SV=1)
HSP 1 Score: 226.5 bits (576), Expect = 3.5e-58
Identity = 113/215 (52.56%), Postives = 160/215 (74.42%), Query Frame = 0
Query: 47 CCPSSSSSRANNFQAPEFYSLNKKMSYLIRTGRISEARELFDSIKHRNTITWNTMITGYV 106
C S S+S +++ F + NK+++ +IR+G I+EAR++F+ ++ RNT+TWNTMI+GYV
Sbjct: 26 CANSFSTSVSSSL---GFRATNKELNQMIRSGYIAEARDIFEKLEARNTVTWNTMISGYV 85
Query: 107 KRREMTKARQLFDEMPNRDIVSWN-MLSGYISCGG-RYIESGQNLFDKIPERDCVSWNTI 166
KRREM +AR+LFD MP RD+V+WN M+SGY+SCGG R++E + LFD++P RD SWNT+
Sbjct: 86 KRREMNQARKLFDVMPKRDVVTWNTMISGYVSCGGIRFLEEARKLFDEMPSRDSFSWNTM 145
Query: 167 LSGYAKNGMMDKAEELFNYMHERNVVSWNAMVSGYLMNGYVEKAIEFFKIMPERDSASLS 226
+SGYAKN + +A LF M ERN VSW+AM++G+ NG V+ A+ F+ MP +DS+ L
Sbjct: 146 ISGYAKNRRIGEALLLFEKMPERNAVSWSAMITGFCQNGEVDSAVVLFRKMPVKDSSPLC 205
Query: 227 ALVSGLIQNEKLVEAERILLHY-SGSDGRGDLVHA 259
ALV+GLI+NE+L EA +L Y S GR DLV+A
Sbjct: 206 ALVAGLIKNERLSEAAWVLGQYGSLVSGREDLVYA 237
BLAST of Lcy05g015280 vs. ExPASy Swiss-Prot
Match:
O64766 (Pentatricopeptide repeat-containing protein At2g35030, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-E15 PE=2 SV=1)
HSP 1 Score: 167.5 bits (423), Expect = 1.9e-40
Identity = 75/169 (44.38%), Postives = 116/169 (68.64%), Query Frame = 0
Query: 71 MSYLIRTGRISEARELFDSIKHRNTITWNTMITGYVKRREMTKARQLFDEMPNRDIVSWN 130
+S +R+ ++S A LF + RN ++WNTMI GY + + KA +LFDEMP R+IVSWN
Sbjct: 116 VSGYLRSKQLSIAEMLFQEMPERNVVSWNTMIDGYAQSGRIDKALELFDEMPERNIVSWN 175
Query: 131 MLSGYISCGGRYIESGQNLFDKIPERDCVSWNTILSGYAKNGMMDKAEELFNYMHERNVV 190
+ + GR I+ NLF+++P RD VSW ++ G AKNG +D+A LF+ M ERN++
Sbjct: 176 SMVKALVQRGR-IDEAMNLFERMPRRDVVSWTAMVDGLAKNGKVDEARRLFDCMPERNII 235
Query: 191 SWNAMVSGYLMNGYVEKAIEFFKIMPERDSASLSALVSGLIQNEKLVEA 240
SWNAM++GY N +++A + F++MPERD AS + +++G I+N ++ +A
Sbjct: 236 SWNAMITGYAQNNRIDEADQLFQVMPERDFASWNTMITGFIRNREMNKA 283
BLAST of Lcy05g015280 vs. ExPASy Swiss-Prot
Match:
Q9SY02 (Pentatricopeptide repeat-containing protein At4g02750 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H24 PE=3 SV=1)
HSP 1 Score: 159.5 bits (402), Expect = 5.2e-38
Identity = 78/188 (41.49%), Postives = 119/188 (63.30%), Query Frame = 0
Query: 66 SLNKKMSYLIRTGRISEARELFDSIKHRNTITWNTMITGYVKRREMTKARQLFDEMPNRD 125
S N + ++ +I EAR+ FDS+ R+ ++WNT+ITGY + ++ +ARQLFDE P +D
Sbjct: 221 SWNCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQD 280
Query: 126 IVSWN-MLSGYISCGGRYIESGQNLFDKIPERDCVSWNTILSGYAKNGMMDKAEELFNYM 185
+ +W M+SGYI R +E + LFDK+PER+ VSWN +L+GY + M+ A+ELF+ M
Sbjct: 281 VFTWTAMVSGYIQ--NRMVEEARELFDKMPERNEVSWNAMLAGYVQGERMEMAKELFDVM 340
Query: 186 HERNVVSWNAMVSGYLMNGYVEKAIEFFKIMPERDSASLSALVSGLIQNEKLVEAERILL 245
RNV +WN M++GY G + +A F MP+RD S +A+++G Q+ EA R+ +
Sbjct: 341 PCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFV 400
Query: 246 HYSGSDGR 253
GR
Sbjct: 401 QMEREGGR 406
BLAST of Lcy05g015280 vs. ExPASy Swiss-Prot
Match:
Q56XI1 (Pentatricopeptide repeat-containing protein At1g09410, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-H18 PE=1 SV=2)
HSP 1 Score: 153.3 bits (386), Expect = 3.8e-36
Identity = 70/176 (39.77%), Postives = 118/176 (67.05%), Query Frame = 0
Query: 68 NKKMSYLIRTGRISEARELFDSIKHRNTITWNTMITGYVKRREMTKARQLFDEMPNRDIV 127
N ++++L R G+I EAR+LFDS ++ +WN+M+ GY AR+LFDEMP+R+I+
Sbjct: 21 NVRITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEMPDRNII 80
Query: 128 SWN-MLSGYISCGGRYIESGQNLFDKIPERDCVSWNTILSGYAKNGMMDKAEELFNYMHE 187
SWN ++SGY+ G I+ + +FD +PER+ VSW ++ GY NG +D AE LF M E
Sbjct: 81 SWNGLVSGYMKNG--EIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKMPE 140
Query: 188 RNVVSWNAMVSGYLMNGYVEKAIEFFKIMPERDSASLSALVSGLIQNEKLVEAERI 243
+N VSW M+ G+L +G ++ A + ++++P++D+ + ++++ GL + ++ EA I
Sbjct: 141 KNKVSWTVMLIGFLQDGRIDDACKLYEMIPDKDNIARTSMIHGLCKEGRVDEAREI 194
BLAST of Lcy05g015280 vs. ExPASy Swiss-Prot
Match:
Q9M4P3 (Pentatricopeptide repeat-containing protein At4g16835, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=DYW10 PE=2 SV=3)
HSP 1 Score: 152.5 bits (384), Expect = 6.4e-36
Identity = 84/211 (39.81%), Postives = 130/211 (61.61%), Query Frame = 0
Query: 44 LNQCCPSSSSS-------RANNFQAP----EFYSLNKKMSYLIRTGRISEARELFDSIKH 103
L + C SSS S R++ P + + LNK ++ +R+G I A +F ++
Sbjct: 30 LVESCSSSSCSSPEPSLVRSDYLTKPSDQDQIFPLNKIIARCVRSGDIDGALRVFHGMRA 89
Query: 104 RNTITWNTMITGYVK-RREMTKARQLFDEMPNRDIVSWNMLSGYISCGGRYI--ESGQNL 163
+NTITWN+++ G K M +A QLFDE+P D S+N++ +SC R + E Q+
Sbjct: 90 KNTITWNSLLIGISKDPSRMMEAHQLFDEIPEPDTFSYNIM---LSCYVRNVNFEKAQSF 149
Query: 164 FDKIPERDCVSWNTILSGYAKNGMMDKAEELFNYMHERNVVSWNAMVSGYLMNGYVEKAI 223
FD++P +D SWNT+++GYA+ G M+KA ELF M E+N VSWNAM+SGY+ G +EKA
Sbjct: 150 FDRMPFKDAASWNTMITGYARRGEMEKARELFYSMMEKNEVSWNAMISGYIECGDLEKAS 209
Query: 224 EFFKIMPERDSASLSALVSGLIQNEKLVEAE 241
FFK+ P R + +A+++G ++ +K+ AE
Sbjct: 210 HFFKVAPVRGVVAWTAMITGYMKAKKVELAE 237
BLAST of Lcy05g015280 vs. ExPASy TrEMBL
Match:
A0A6J1EN32 (pentatricopeptide repeat-containing protein At1g62260, mitochondrial isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111435059 PE=4 SV=1)
HSP 1 Score: 445.3 bits (1144), Expect = 1.8e-121
Identity = 222/259 (85.71%), Postives = 238/259 (91.89%), Query Frame = 0
Query: 1 MANLVMIRRRIWSMKTFHAAALTIFNAQQHVHRSPTTFNIAFQLNQCCPSSSSSRANNFQ 60
M NLVMIRRRIWS KTFH AALTIFNAQ++V R PTTFNI+FQL Q C SS FQ
Sbjct: 1 MPNLVMIRRRIWSTKTFHTAALTIFNAQRYVRRRPTTFNISFQLKQSCFSS-------FQ 60
Query: 61 APEFYSLNKKMSYLIRTGRISEARELFDSIKHRNTITWNTMITGYVKRREMTKARQLFDE 120
APEFYSLNK+MSYLIRTG+I EAR+LFDSIKHRNTITWNTMITGYVKRREMTKARQLFDE
Sbjct: 61 APEFYSLNKRMSYLIRTGQIIEARKLFDSIKHRNTITWNTMITGYVKRREMTKARQLFDE 120
Query: 121 MPNRDIVSWN-MLSGYISCGGRYIESGQNLFDKIPERDCVSWNTILSGYAKNGMMDKAEE 180
MP+RDIVSWN MLSGYISCGGRYIESG+NLFDK+P+RDCVSWNT++SGYAKNGMM++AEE
Sbjct: 121 MPHRDIVSWNLMLSGYISCGGRYIESGRNLFDKMPQRDCVSWNTMVSGYAKNGMMEEAEE 180
Query: 181 LFNYMHERNVVSWNAMVSGYLMNGYVEKAIEFFKIMPERDSASLSALVSGLIQNEKLVEA 240
LF YM ERNVVSWNAMVSGYLMNGYVEKAIEFFK+MPERDSASLSALVSGLIQNEKLVEA
Sbjct: 181 LFKYMPERNVVSWNAMVSGYLMNGYVEKAIEFFKMMPERDSASLSALVSGLIQNEKLVEA 240
Query: 241 ERILLHYSGSDGRGDLVHA 259
ERILL Y GSDGRG+LVHA
Sbjct: 241 ERILLQYGGSDGRGNLVHA 252
BLAST of Lcy05g015280 vs. ExPASy TrEMBL
Match:
A0A6J1EJ37 (pentatricopeptide repeat-containing protein At1g62260, mitochondrial isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111435059 PE=4 SV=1)
HSP 1 Score: 445.3 bits (1144), Expect = 1.8e-121
Identity = 222/259 (85.71%), Postives = 238/259 (91.89%), Query Frame = 0
Query: 1 MANLVMIRRRIWSMKTFHAAALTIFNAQQHVHRSPTTFNIAFQLNQCCPSSSSSRANNFQ 60
M NLVMIRRRIWS KTFH AALTIFNAQ++V R PTTFNI+FQL Q C SS FQ
Sbjct: 1 MPNLVMIRRRIWSTKTFHTAALTIFNAQRYVRRRPTTFNISFQLKQSCFSS-------FQ 60
Query: 61 APEFYSLNKKMSYLIRTGRISEARELFDSIKHRNTITWNTMITGYVKRREMTKARQLFDE 120
APEFYSLNK+MSYLIRTG+I EAR+LFDSIKHRNTITWNTMITGYVKRREMTKARQLFDE
Sbjct: 61 APEFYSLNKRMSYLIRTGQIIEARKLFDSIKHRNTITWNTMITGYVKRREMTKARQLFDE 120
Query: 121 MPNRDIVSWN-MLSGYISCGGRYIESGQNLFDKIPERDCVSWNTILSGYAKNGMMDKAEE 180
MP+RDIVSWN MLSGYISCGGRYIESG+NLFDK+P+RDCVSWNT++SGYAKNGMM++AEE
Sbjct: 121 MPHRDIVSWNLMLSGYISCGGRYIESGRNLFDKMPQRDCVSWNTMVSGYAKNGMMEEAEE 180
Query: 181 LFNYMHERNVVSWNAMVSGYLMNGYVEKAIEFFKIMPERDSASLSALVSGLIQNEKLVEA 240
LF YM ERNVVSWNAMVSGYLMNGYVEKAIEFFK+MPERDSASLSALVSGLIQNEKLVEA
Sbjct: 181 LFKYMPERNVVSWNAMVSGYLMNGYVEKAIEFFKMMPERDSASLSALVSGLIQNEKLVEA 240
Query: 241 ERILLHYSGSDGRGDLVHA 259
ERILL Y GSDGRG+LVHA
Sbjct: 241 ERILLQYGGSDGRGNLVHA 252
BLAST of Lcy05g015280 vs. ExPASy TrEMBL
Match:
A0A6J1JFD5 (pentatricopeptide repeat-containing protein At1g62260, mitochondrial isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111486397 PE=4 SV=1)
HSP 1 Score: 443.7 bits (1140), Expect = 5.1e-121
Identity = 221/259 (85.33%), Postives = 238/259 (91.89%), Query Frame = 0
Query: 1 MANLVMIRRRIWSMKTFHAAALTIFNAQQHVHRSPTTFNIAFQLNQCCPSSSSSRANNFQ 60
M NLVMIRRRIWS KTFH AALTIFNAQQ+V R PTTF+I+FQL Q S ++FQ
Sbjct: 1 MPNLVMIRRRIWSTKTFHTAALTIFNAQQYVRRRPTTFSISFQLKQ-------SSFSSFQ 60
Query: 61 APEFYSLNKKMSYLIRTGRISEARELFDSIKHRNTITWNTMITGYVKRREMTKARQLFDE 120
APEFYSLNKKMSYLIRTG+I EARELFDSIKHRNT+TWNTMITGYVKRREMTKARQLFDE
Sbjct: 61 APEFYSLNKKMSYLIRTGQIIEARELFDSIKHRNTVTWNTMITGYVKRREMTKARQLFDE 120
Query: 121 MPNRDIVSWN-MLSGYISCGGRYIESGQNLFDKIPERDCVSWNTILSGYAKNGMMDKAEE 180
MP+RDIVSWN MLSGYISCGGRYIESG+NLFDK+P+RDCVSWNT++SGYAKNGMM++AEE
Sbjct: 121 MPHRDIVSWNLMLSGYISCGGRYIESGRNLFDKMPQRDCVSWNTMVSGYAKNGMMEEAEE 180
Query: 181 LFNYMHERNVVSWNAMVSGYLMNGYVEKAIEFFKIMPERDSASLSALVSGLIQNEKLVEA 240
LF YM ERNVVSWNAMVSGYLMNGYVEKAIEFFK+MPERDSASLSALVSGLIQNEKLVEA
Sbjct: 181 LFKYMPERNVVSWNAMVSGYLMNGYVEKAIEFFKMMPERDSASLSALVSGLIQNEKLVEA 240
Query: 241 ERILLHYSGSDGRGDLVHA 259
ERILL Y GSDGRG+LVHA
Sbjct: 241 ERILLQYGGSDGRGNLVHA 252
BLAST of Lcy05g015280 vs. ExPASy TrEMBL
Match:
A0A6J1JNX0 (pentatricopeptide repeat-containing protein At1g62260, mitochondrial isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111486397 PE=4 SV=1)
HSP 1 Score: 443.7 bits (1140), Expect = 5.1e-121
Identity = 221/259 (85.33%), Postives = 238/259 (91.89%), Query Frame = 0
Query: 1 MANLVMIRRRIWSMKTFHAAALTIFNAQQHVHRSPTTFNIAFQLNQCCPSSSSSRANNFQ 60
M NLVMIRRRIWS KTFH AALTIFNAQQ+V R PTTF+I+FQL Q S ++FQ
Sbjct: 1 MPNLVMIRRRIWSTKTFHTAALTIFNAQQYVRRRPTTFSISFQLKQ-------SSFSSFQ 60
Query: 61 APEFYSLNKKMSYLIRTGRISEARELFDSIKHRNTITWNTMITGYVKRREMTKARQLFDE 120
APEFYSLNKKMSYLIRTG+I EARELFDSIKHRNT+TWNTMITGYVKRREMTKARQLFDE
Sbjct: 61 APEFYSLNKKMSYLIRTGQIIEARELFDSIKHRNTVTWNTMITGYVKRREMTKARQLFDE 120
Query: 121 MPNRDIVSWN-MLSGYISCGGRYIESGQNLFDKIPERDCVSWNTILSGYAKNGMMDKAEE 180
MP+RDIVSWN MLSGYISCGGRYIESG+NLFDK+P+RDCVSWNT++SGYAKNGMM++AEE
Sbjct: 121 MPHRDIVSWNLMLSGYISCGGRYIESGRNLFDKMPQRDCVSWNTMVSGYAKNGMMEEAEE 180
Query: 181 LFNYMHERNVVSWNAMVSGYLMNGYVEKAIEFFKIMPERDSASLSALVSGLIQNEKLVEA 240
LF YM ERNVVSWNAMVSGYLMNGYVEKAIEFFK+MPERDSASLSALVSGLIQNEKLVEA
Sbjct: 181 LFKYMPERNVVSWNAMVSGYLMNGYVEKAIEFFKMMPERDSASLSALVSGLIQNEKLVEA 240
Query: 241 ERILLHYSGSDGRGDLVHA 259
ERILL Y GSDGRG+LVHA
Sbjct: 241 ERILLQYGGSDGRGNLVHA 252
BLAST of Lcy05g015280 vs. ExPASy TrEMBL
Match:
A0A5D3DJ38 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold142G004560 PE=4 SV=1)
HSP 1 Score: 423.3 bits (1087), Expect = 7.2e-115
Identity = 209/259 (80.69%), Postives = 230/259 (88.80%), Query Frame = 0
Query: 1 MANLVMIRRRIWSMKTFHAAALTIFNAQQHVHRSPTTFNIAFQLNQCCPSSSSSRANNFQ 60
M+NLVM+RRRIWS KTFHAAALT+FNAQQH R P FNIAFQ Q C SSS+AN+FQ
Sbjct: 1 MSNLVMVRRRIWSTKTFHAAALTVFNAQQHFRRRPVLFNIAFQFKQTC--FSSSKANSFQ 60
Query: 61 APEFYSLNKKMSYLIRTGRISEARELFDSIKHRNTITWNTMITGYVKRREMTKARQLFDE 120
PEFYSL+KK+SYLIRTGRI+EAR LFDSIKH NTITWN MIT YVKRREM KARQLFDE
Sbjct: 61 VPEFYSLDKKISYLIRTGRINEARALFDSIKHWNTITWNRMITAYVKRREMLKARQLFDE 120
Query: 121 MPNRDIVSWN-MLSGYISCGGRYIESGQNLFDKIPERDCVSWNTILSGYAKNGMMDKAEE 180
MPNRDIVSWN MLSGYISCGG++IE +N+FD++PE DCVSWNT+LSGYAK+GMMDKAEE
Sbjct: 121 MPNRDIVSWNLMLSGYISCGGKFIERARNMFDEMPESDCVSWNTMLSGYAKSGMMDKAEE 180
Query: 181 LFNYMHERNVVSWNAMVSGYLMNGYVEKAIEFFKIMPERDSASLSALVSGLIQNEKLVEA 240
LFN M ERNVVSWNAMVSGYLMNGYVEKAIEFFK+MP+RDSASL ALVSGLIQN+KLVEA
Sbjct: 181 LFNDMPERNVVSWNAMVSGYLMNGYVEKAIEFFKLMPKRDSASLRALVSGLIQNDKLVEA 240
Query: 241 ERILLHYSGSDGRGDLVHA 259
ERIL Y G+DG+GDLV A
Sbjct: 241 ERILFQYGGNDGKGDLVDA 257
BLAST of Lcy05g015280 vs. NCBI nr
Match:
KAG7022739.1 (Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 445.7 bits (1145), Expect = 2.8e-121
Identity = 223/259 (86.10%), Postives = 237/259 (91.51%), Query Frame = 0
Query: 1 MANLVMIRRRIWSMKTFHAAALTIFNAQQHVHRSPTTFNIAFQLNQCCPSSSSSRANNFQ 60
M NLVMIRRRIWS KTFH AALTIFNAQ++V R PTTFNI+FQL Q C SS F
Sbjct: 1 MPNLVMIRRRIWSTKTFHTAALTIFNAQRYVRRRPTTFNISFQLKQSCFSS-------FP 60
Query: 61 APEFYSLNKKMSYLIRTGRISEARELFDSIKHRNTITWNTMITGYVKRREMTKARQLFDE 120
APEFYSLNKKMSYLIRTG+I EARELFDSIKHRNTITWNTMITGYVKRREMTKARQLFDE
Sbjct: 61 APEFYSLNKKMSYLIRTGQIIEARELFDSIKHRNTITWNTMITGYVKRREMTKARQLFDE 120
Query: 121 MPNRDIVSWN-MLSGYISCGGRYIESGQNLFDKIPERDCVSWNTILSGYAKNGMMDKAEE 180
MP+RDIVSWN MLSGYISCGGRYIESG+NLFDK+P+RDCVSWNT++SGYAKNGMM++AEE
Sbjct: 121 MPHRDIVSWNLMLSGYISCGGRYIESGRNLFDKMPQRDCVSWNTMVSGYAKNGMMEEAEE 180
Query: 181 LFNYMHERNVVSWNAMVSGYLMNGYVEKAIEFFKIMPERDSASLSALVSGLIQNEKLVEA 240
LF YM ERNVVSWNAMVSGYLMNGYVEKAIEFFK+MPERDSASLSALVSGLIQNEKLVEA
Sbjct: 181 LFKYMPERNVVSWNAMVSGYLMNGYVEKAIEFFKMMPERDSASLSALVSGLIQNEKLVEA 240
Query: 241 ERILLHYSGSDGRGDLVHA 259
ERILL Y GSDGRG+LVHA
Sbjct: 241 ERILLQYGGSDGRGNLVHA 252
BLAST of Lcy05g015280 vs. NCBI nr
Match:
XP_022928153.1 (pentatricopeptide repeat-containing protein At1g62260, mitochondrial isoform X2 [Cucurbita moschata])
HSP 1 Score: 445.3 bits (1144), Expect = 3.6e-121
Identity = 222/259 (85.71%), Postives = 238/259 (91.89%), Query Frame = 0
Query: 1 MANLVMIRRRIWSMKTFHAAALTIFNAQQHVHRSPTTFNIAFQLNQCCPSSSSSRANNFQ 60
M NLVMIRRRIWS KTFH AALTIFNAQ++V R PTTFNI+FQL Q C SS FQ
Sbjct: 1 MPNLVMIRRRIWSTKTFHTAALTIFNAQRYVRRRPTTFNISFQLKQSCFSS-------FQ 60
Query: 61 APEFYSLNKKMSYLIRTGRISEARELFDSIKHRNTITWNTMITGYVKRREMTKARQLFDE 120
APEFYSLNK+MSYLIRTG+I EAR+LFDSIKHRNTITWNTMITGYVKRREMTKARQLFDE
Sbjct: 61 APEFYSLNKRMSYLIRTGQIIEARKLFDSIKHRNTITWNTMITGYVKRREMTKARQLFDE 120
Query: 121 MPNRDIVSWN-MLSGYISCGGRYIESGQNLFDKIPERDCVSWNTILSGYAKNGMMDKAEE 180
MP+RDIVSWN MLSGYISCGGRYIESG+NLFDK+P+RDCVSWNT++SGYAKNGMM++AEE
Sbjct: 121 MPHRDIVSWNLMLSGYISCGGRYIESGRNLFDKMPQRDCVSWNTMVSGYAKNGMMEEAEE 180
Query: 181 LFNYMHERNVVSWNAMVSGYLMNGYVEKAIEFFKIMPERDSASLSALVSGLIQNEKLVEA 240
LF YM ERNVVSWNAMVSGYLMNGYVEKAIEFFK+MPERDSASLSALVSGLIQNEKLVEA
Sbjct: 181 LFKYMPERNVVSWNAMVSGYLMNGYVEKAIEFFKMMPERDSASLSALVSGLIQNEKLVEA 240
Query: 241 ERILLHYSGSDGRGDLVHA 259
ERILL Y GSDGRG+LVHA
Sbjct: 241 ERILLQYGGSDGRGNLVHA 252
BLAST of Lcy05g015280 vs. NCBI nr
Match:
XP_022928152.1 (pentatricopeptide repeat-containing protein At1g62260, mitochondrial isoform X1 [Cucurbita moschata])
HSP 1 Score: 445.3 bits (1144), Expect = 3.6e-121
Identity = 222/259 (85.71%), Postives = 238/259 (91.89%), Query Frame = 0
Query: 1 MANLVMIRRRIWSMKTFHAAALTIFNAQQHVHRSPTTFNIAFQLNQCCPSSSSSRANNFQ 60
M NLVMIRRRIWS KTFH AALTIFNAQ++V R PTTFNI+FQL Q C SS FQ
Sbjct: 1 MPNLVMIRRRIWSTKTFHTAALTIFNAQRYVRRRPTTFNISFQLKQSCFSS-------FQ 60
Query: 61 APEFYSLNKKMSYLIRTGRISEARELFDSIKHRNTITWNTMITGYVKRREMTKARQLFDE 120
APEFYSLNK+MSYLIRTG+I EAR+LFDSIKHRNTITWNTMITGYVKRREMTKARQLFDE
Sbjct: 61 APEFYSLNKRMSYLIRTGQIIEARKLFDSIKHRNTITWNTMITGYVKRREMTKARQLFDE 120
Query: 121 MPNRDIVSWN-MLSGYISCGGRYIESGQNLFDKIPERDCVSWNTILSGYAKNGMMDKAEE 180
MP+RDIVSWN MLSGYISCGGRYIESG+NLFDK+P+RDCVSWNT++SGYAKNGMM++AEE
Sbjct: 121 MPHRDIVSWNLMLSGYISCGGRYIESGRNLFDKMPQRDCVSWNTMVSGYAKNGMMEEAEE 180
Query: 181 LFNYMHERNVVSWNAMVSGYLMNGYVEKAIEFFKIMPERDSASLSALVSGLIQNEKLVEA 240
LF YM ERNVVSWNAMVSGYLMNGYVEKAIEFFK+MPERDSASLSALVSGLIQNEKLVEA
Sbjct: 181 LFKYMPERNVVSWNAMVSGYLMNGYVEKAIEFFKMMPERDSASLSALVSGLIQNEKLVEA 240
Query: 241 ERILLHYSGSDGRGDLVHA 259
ERILL Y GSDGRG+LVHA
Sbjct: 241 ERILLQYGGSDGRGNLVHA 252
BLAST of Lcy05g015280 vs. NCBI nr
Match:
XP_022989279.1 (pentatricopeptide repeat-containing protein At1g62260, mitochondrial isoform X3 [Cucurbita maxima])
HSP 1 Score: 443.7 bits (1140), Expect = 1.1e-120
Identity = 221/259 (85.33%), Postives = 238/259 (91.89%), Query Frame = 0
Query: 1 MANLVMIRRRIWSMKTFHAAALTIFNAQQHVHRSPTTFNIAFQLNQCCPSSSSSRANNFQ 60
M NLVMIRRRIWS KTFH AALTIFNAQQ+V R PTTF+I+FQL Q S ++FQ
Sbjct: 1 MPNLVMIRRRIWSTKTFHTAALTIFNAQQYVRRRPTTFSISFQLKQ-------SSFSSFQ 60
Query: 61 APEFYSLNKKMSYLIRTGRISEARELFDSIKHRNTITWNTMITGYVKRREMTKARQLFDE 120
APEFYSLNKKMSYLIRTG+I EARELFDSIKHRNT+TWNTMITGYVKRREMTKARQLFDE
Sbjct: 61 APEFYSLNKKMSYLIRTGQIIEARELFDSIKHRNTVTWNTMITGYVKRREMTKARQLFDE 120
Query: 121 MPNRDIVSWN-MLSGYISCGGRYIESGQNLFDKIPERDCVSWNTILSGYAKNGMMDKAEE 180
MP+RDIVSWN MLSGYISCGGRYIESG+NLFDK+P+RDCVSWNT++SGYAKNGMM++AEE
Sbjct: 121 MPHRDIVSWNLMLSGYISCGGRYIESGRNLFDKMPQRDCVSWNTMVSGYAKNGMMEEAEE 180
Query: 181 LFNYMHERNVVSWNAMVSGYLMNGYVEKAIEFFKIMPERDSASLSALVSGLIQNEKLVEA 240
LF YM ERNVVSWNAMVSGYLMNGYVEKAIEFFK+MPERDSASLSALVSGLIQNEKLVEA
Sbjct: 181 LFKYMPERNVVSWNAMVSGYLMNGYVEKAIEFFKMMPERDSASLSALVSGLIQNEKLVEA 240
Query: 241 ERILLHYSGSDGRGDLVHA 259
ERILL Y GSDGRG+LVHA
Sbjct: 241 ERILLQYGGSDGRGNLVHA 252
BLAST of Lcy05g015280 vs. NCBI nr
Match:
XP_022989277.1 (pentatricopeptide repeat-containing protein At1g62260, mitochondrial isoform X1 [Cucurbita maxima] >XP_022989278.1 pentatricopeptide repeat-containing protein At1g62260, mitochondrial isoform X2 [Cucurbita maxima])
HSP 1 Score: 443.7 bits (1140), Expect = 1.1e-120
Identity = 221/259 (85.33%), Postives = 238/259 (91.89%), Query Frame = 0
Query: 1 MANLVMIRRRIWSMKTFHAAALTIFNAQQHVHRSPTTFNIAFQLNQCCPSSSSSRANNFQ 60
M NLVMIRRRIWS KTFH AALTIFNAQQ+V R PTTF+I+FQL Q S ++FQ
Sbjct: 1 MPNLVMIRRRIWSTKTFHTAALTIFNAQQYVRRRPTTFSISFQLKQ-------SSFSSFQ 60
Query: 61 APEFYSLNKKMSYLIRTGRISEARELFDSIKHRNTITWNTMITGYVKRREMTKARQLFDE 120
APEFYSLNKKMSYLIRTG+I EARELFDSIKHRNT+TWNTMITGYVKRREMTKARQLFDE
Sbjct: 61 APEFYSLNKKMSYLIRTGQIIEARELFDSIKHRNTVTWNTMITGYVKRREMTKARQLFDE 120
Query: 121 MPNRDIVSWN-MLSGYISCGGRYIESGQNLFDKIPERDCVSWNTILSGYAKNGMMDKAEE 180
MP+RDIVSWN MLSGYISCGGRYIESG+NLFDK+P+RDCVSWNT++SGYAKNGMM++AEE
Sbjct: 121 MPHRDIVSWNLMLSGYISCGGRYIESGRNLFDKMPQRDCVSWNTMVSGYAKNGMMEEAEE 180
Query: 181 LFNYMHERNVVSWNAMVSGYLMNGYVEKAIEFFKIMPERDSASLSALVSGLIQNEKLVEA 240
LF YM ERNVVSWNAMVSGYLMNGYVEKAIEFFK+MPERDSASLSALVSGLIQNEKLVEA
Sbjct: 181 LFKYMPERNVVSWNAMVSGYLMNGYVEKAIEFFKMMPERDSASLSALVSGLIQNEKLVEA 240
Query: 241 ERILLHYSGSDGRGDLVHA 259
ERILL Y GSDGRG+LVHA
Sbjct: 241 ERILLQYGGSDGRGNLVHA 252
BLAST of Lcy05g015280 vs. TAIR 10
Match:
AT1G62260.1 (mitochondrial editing factor 9 )
HSP 1 Score: 226.5 bits (576), Expect = 2.5e-59
Identity = 113/215 (52.56%), Postives = 160/215 (74.42%), Query Frame = 0
Query: 47 CCPSSSSSRANNFQAPEFYSLNKKMSYLIRTGRISEARELFDSIKHRNTITWNTMITGYV 106
C S S+S +++ F + NK+++ +IR+G I+EAR++F+ ++ RNT+TWNTMI+GYV
Sbjct: 26 CANSFSTSVSSSL---GFRATNKELNQMIRSGYIAEARDIFEKLEARNTVTWNTMISGYV 85
Query: 107 KRREMTKARQLFDEMPNRDIVSWN-MLSGYISCGG-RYIESGQNLFDKIPERDCVSWNTI 166
KRREM +AR+LFD MP RD+V+WN M+SGY+SCGG R++E + LFD++P RD SWNT+
Sbjct: 86 KRREMNQARKLFDVMPKRDVVTWNTMISGYVSCGGIRFLEEARKLFDEMPSRDSFSWNTM 145
Query: 167 LSGYAKNGMMDKAEELFNYMHERNVVSWNAMVSGYLMNGYVEKAIEFFKIMPERDSASLS 226
+SGYAKN + +A LF M ERN VSW+AM++G+ NG V+ A+ F+ MP +DS+ L
Sbjct: 146 ISGYAKNRRIGEALLLFEKMPERNAVSWSAMITGFCQNGEVDSAVVLFRKMPVKDSSPLC 205
Query: 227 ALVSGLIQNEKLVEAERILLHY-SGSDGRGDLVHA 259
ALV+GLI+NE+L EA +L Y S GR DLV+A
Sbjct: 206 ALVAGLIKNERLSEAAWVLGQYGSLVSGREDLVYA 237
BLAST of Lcy05g015280 vs. TAIR 10
Match:
AT2G35030.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 167.5 bits (423), Expect = 1.4e-41
Identity = 75/169 (44.38%), Postives = 116/169 (68.64%), Query Frame = 0
Query: 71 MSYLIRTGRISEARELFDSIKHRNTITWNTMITGYVKRREMTKARQLFDEMPNRDIVSWN 130
+S +R+ ++S A LF + RN ++WNTMI GY + + KA +LFDEMP R+IVSWN
Sbjct: 116 VSGYLRSKQLSIAEMLFQEMPERNVVSWNTMIDGYAQSGRIDKALELFDEMPERNIVSWN 175
Query: 131 MLSGYISCGGRYIESGQNLFDKIPERDCVSWNTILSGYAKNGMMDKAEELFNYMHERNVV 190
+ + GR I+ NLF+++P RD VSW ++ G AKNG +D+A LF+ M ERN++
Sbjct: 176 SMVKALVQRGR-IDEAMNLFERMPRRDVVSWTAMVDGLAKNGKVDEARRLFDCMPERNII 235
Query: 191 SWNAMVSGYLMNGYVEKAIEFFKIMPERDSASLSALVSGLIQNEKLVEA 240
SWNAM++GY N +++A + F++MPERD AS + +++G I+N ++ +A
Sbjct: 236 SWNAMITGYAQNNRIDEADQLFQVMPERDFASWNTMITGFIRNREMNKA 283
BLAST of Lcy05g015280 vs. TAIR 10
Match:
AT4G02750.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 159.5 bits (402), Expect = 3.7e-39
Identity = 78/188 (41.49%), Postives = 119/188 (63.30%), Query Frame = 0
Query: 66 SLNKKMSYLIRTGRISEARELFDSIKHRNTITWNTMITGYVKRREMTKARQLFDEMPNRD 125
S N + ++ +I EAR+ FDS+ R+ ++WNT+ITGY + ++ +ARQLFDE P +D
Sbjct: 221 SWNCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQD 280
Query: 126 IVSWN-MLSGYISCGGRYIESGQNLFDKIPERDCVSWNTILSGYAKNGMMDKAEELFNYM 185
+ +W M+SGYI R +E + LFDK+PER+ VSWN +L+GY + M+ A+ELF+ M
Sbjct: 281 VFTWTAMVSGYIQ--NRMVEEARELFDKMPERNEVSWNAMLAGYVQGERMEMAKELFDVM 340
Query: 186 HERNVVSWNAMVSGYLMNGYVEKAIEFFKIMPERDSASLSALVSGLIQNEKLVEAERILL 245
RNV +WN M++GY G + +A F MP+RD S +A+++G Q+ EA R+ +
Sbjct: 341 PCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFV 400
Query: 246 HYSGSDGR 253
GR
Sbjct: 401 QMEREGGR 406
BLAST of Lcy05g015280 vs. TAIR 10
Match:
AT1G09410.1 (pentatricopeptide (PPR) repeat-containing protein )
HSP 1 Score: 153.3 bits (386), Expect = 2.7e-37
Identity = 70/176 (39.77%), Postives = 118/176 (67.05%), Query Frame = 0
Query: 68 NKKMSYLIRTGRISEARELFDSIKHRNTITWNTMITGYVKRREMTKARQLFDEMPNRDIV 127
N ++++L R G+I EAR+LFDS ++ +WN+M+ GY AR+LFDEMP+R+I+
Sbjct: 21 NVRITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEMPDRNII 80
Query: 128 SWN-MLSGYISCGGRYIESGQNLFDKIPERDCVSWNTILSGYAKNGMMDKAEELFNYMHE 187
SWN ++SGY+ G I+ + +FD +PER+ VSW ++ GY NG +D AE LF M E
Sbjct: 81 SWNGLVSGYMKNG--EIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKMPE 140
Query: 188 RNVVSWNAMVSGYLMNGYVEKAIEFFKIMPERDSASLSALVSGLIQNEKLVEAERI 243
+N VSW M+ G+L +G ++ A + ++++P++D+ + ++++ GL + ++ EA I
Sbjct: 141 KNKVSWTVMLIGFLQDGRIDDACKLYEMIPDKDNIARTSMIHGLCKEGRVDEAREI 194
BLAST of Lcy05g015280 vs. TAIR 10
Match:
AT4G16835.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 152.5 bits (384), Expect = 4.5e-37
Identity = 84/211 (39.81%), Postives = 130/211 (61.61%), Query Frame = 0
Query: 44 LNQCCPSSSSS-------RANNFQAP----EFYSLNKKMSYLIRTGRISEARELFDSIKH 103
L + C SSS S R++ P + + LNK ++ +R+G I A +F ++
Sbjct: 30 LVESCSSSSCSSPEPSLVRSDYLTKPSDQDQIFPLNKIIARCVRSGDIDGALRVFHGMRA 89
Query: 104 RNTITWNTMITGYVK-RREMTKARQLFDEMPNRDIVSWNMLSGYISCGGRYI--ESGQNL 163
+NTITWN+++ G K M +A QLFDE+P D S+N++ +SC R + E Q+
Sbjct: 90 KNTITWNSLLIGISKDPSRMMEAHQLFDEIPEPDTFSYNIM---LSCYVRNVNFEKAQSF 149
Query: 164 FDKIPERDCVSWNTILSGYAKNGMMDKAEELFNYMHERNVVSWNAMVSGYLMNGYVEKAI 223
FD++P +D SWNT+++GYA+ G M+KA ELF M E+N VSWNAM+SGY+ G +EKA
Sbjct: 150 FDRMPFKDAASWNTMITGYARRGEMEKARELFYSMMEKNEVSWNAMISGYIECGDLEKAS 209
Query: 224 EFFKIMPERDSASLSALVSGLIQNEKLVEAE 241
FFK+ P R + +A+++G ++ +K+ AE
Sbjct: 210 HFFKVAPVRGVVAWTAMITGYMKAKKVELAE 237
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
O04590 | 3.5e-58 | 52.56 | Pentatricopeptide repeat-containing protein At1g62260, mitochondrial OS=Arabidop... | [more] |
O64766 | 1.9e-40 | 44.38 | Pentatricopeptide repeat-containing protein At2g35030, mitochondrial OS=Arabidop... | [more] |
Q9SY02 | 5.2e-38 | 41.49 | Pentatricopeptide repeat-containing protein At4g02750 OS=Arabidopsis thaliana OX... | [more] |
Q56XI1 | 3.8e-36 | 39.77 | Pentatricopeptide repeat-containing protein At1g09410, mitochondrial OS=Arabidop... | [more] |
Q9M4P3 | 6.4e-36 | 39.81 | Pentatricopeptide repeat-containing protein At4g16835, mitochondrial OS=Arabidop... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1EN32 | 1.8e-121 | 85.71 | pentatricopeptide repeat-containing protein At1g62260, mitochondrial isoform X2 ... | [more] |
A0A6J1EJ37 | 1.8e-121 | 85.71 | pentatricopeptide repeat-containing protein At1g62260, mitochondrial isoform X1 ... | [more] |
A0A6J1JFD5 | 5.1e-121 | 85.33 | pentatricopeptide repeat-containing protein At1g62260, mitochondrial isoform X1 ... | [more] |
A0A6J1JNX0 | 5.1e-121 | 85.33 | pentatricopeptide repeat-containing protein At1g62260, mitochondrial isoform X3 ... | [more] |
A0A5D3DJ38 | 7.2e-115 | 80.69 | Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... | [more] |
Match Name | E-value | Identity | Description | |
KAG7022739.1 | 2.8e-121 | 86.10 | Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita a... | [more] |
XP_022928153.1 | 3.6e-121 | 85.71 | pentatricopeptide repeat-containing protein At1g62260, mitochondrial isoform X2 ... | [more] |
XP_022928152.1 | 3.6e-121 | 85.71 | pentatricopeptide repeat-containing protein At1g62260, mitochondrial isoform X1 ... | [more] |
XP_022989279.1 | 1.1e-120 | 85.33 | pentatricopeptide repeat-containing protein At1g62260, mitochondrial isoform X3 ... | [more] |
XP_022989277.1 | 1.1e-120 | 85.33 | pentatricopeptide repeat-containing protein At1g62260, mitochondrial isoform X1 ... | [more] |
Match Name | E-value | Identity | Description | |
AT1G62260.1 | 2.5e-59 | 52.56 | mitochondrial editing factor 9 | [more] |
AT2G35030.1 | 1.4e-41 | 44.38 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT4G02750.1 | 3.7e-39 | 41.49 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT1G09410.1 | 2.7e-37 | 39.77 | pentatricopeptide (PPR) repeat-containing protein | [more] |
AT4G16835.1 | 4.5e-37 | 39.81 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |