Lcy05g015200 (gene) Sponge gourd (P93075) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGACCAGTTCCTCTAGAGCTCCAACACACACGTGGACGAATAACGAGGACGCGAAGCTTGTGGAGTCCCTCGTGTCGTTACTTCATGTGGGCGATTGGAGGTCCGATAATGGGACGTTCAGATCTGGGTATCAAGCGCAACTGGAACACTTGATGAGGGAGAAACTGCCGGGACGGGACGTTCCAGCACAGAGCTGCATTGAATCCAGGGTTCGCACCCTGAAGAAATAA ATGACCAGTTCCTCTAGAGCTCCAACACACACGTGGACGAATAACGAGGACGCGAAGCTTGTGGAGTCCCTCGTGTCGTTACTTCATGTGGGCGATTGGAGGTCCGATAATGGGACGTTCAGATCTGGGTATCAAGCGCAACTGGAACACTTGATGAGGGAGAAACTGCCGGGACGGGACGTTCCAGCACAGAGCTGCATTGAATCCAGGGTTCGCACCCTGAAGAAATAA ATGACCAGTTCCTCTAGAGCTCCAACACACACGTGGACGAATAACGAGGACGCGAAGCTTGTGGAGTCCCTCGTGTCGTTACTTCATGTGGGCGATTGGAGGTCCGATAATGGGACGTTCAGATCTGGGTATCAAGCGCAACTGGAACACTTGATGAGGGAGAAACTGCCGGGACGGGACGTTCCAGCACAGAGCTGCATTGAATCCAGGGTTCGCACCCTGAAGAAATAA MTSSSRAPTHTWTNNEDAKLVESLVSLLHVGDWRSDNGTFRSGYQAQLEHLMREKLPGRDVPAQSCIESRVRTLKK Homology
BLAST of Lcy05g015200 vs. ExPASy TrEMBL
Match: A0A5D3CQS4 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold5G00390 PE=4 SV=1) HSP 1 Score: 95.9 bits (237), Expect = 7.7e-17 Identity = 45/76 (59.21%), Postives = 55/76 (72.37%), Query Frame = 0
BLAST of Lcy05g015200 vs. ExPASy TrEMBL
Match: A0A5A7UNC0 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold288G00650 PE=4 SV=1) HSP 1 Score: 92.8 bits (229), Expect = 6.5e-16 Identity = 42/76 (55.26%), Postives = 56/76 (73.68%), Query Frame = 0
BLAST of Lcy05g015200 vs. ExPASy TrEMBL
Match: A0A5A7U0H7 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold648G002060 PE=4 SV=1) HSP 1 Score: 92.4 bits (228), Expect = 8.6e-16 Identity = 43/76 (56.58%), Postives = 53/76 (69.74%), Query Frame = 0
BLAST of Lcy05g015200 vs. ExPASy TrEMBL
Match: A0A1S3B4L3 (uncharacterized protein LOC103485953 OS=Cucumis melo OX=3656 GN=LOC103485953 PE=4 SV=1) HSP 1 Score: 92.4 bits (228), Expect = 8.6e-16 Identity = 43/76 (56.58%), Postives = 53/76 (69.74%), Query Frame = 0
BLAST of Lcy05g015200 vs. ExPASy TrEMBL
Match: A0A5A7TQ37 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold74G003200 PE=4 SV=1) HSP 1 Score: 91.3 bits (225), Expect = 1.9e-15 Identity = 41/76 (53.95%), Postives = 55/76 (72.37%), Query Frame = 0
BLAST of Lcy05g015200 vs. NCBI nr
Match: KAA0066605.1 (retrotransposon protein [Cucumis melo var. makuwa] >TYK14213.1 retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 95.9 bits (237), Expect = 1.6e-16 Identity = 45/76 (59.21%), Postives = 55/76 (72.37%), Query Frame = 0
BLAST of Lcy05g015200 vs. NCBI nr
Match: KAA0056560.1 (retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 92.8 bits (229), Expect = 1.4e-15 Identity = 42/76 (55.26%), Postives = 56/76 (73.68%), Query Frame = 0
BLAST of Lcy05g015200 vs. NCBI nr
Match: XP_008441954.1 (PREDICTED: uncharacterized protein LOC103485953 [Cucumis melo] >KAA0047736.1 retrotransposon protein [Cucumis melo var. makuwa] >TYK08388.1 retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 92.4 bits (228), Expect = 1.8e-15 Identity = 43/76 (56.58%), Postives = 53/76 (69.74%), Query Frame = 0
BLAST of Lcy05g015200 vs. NCBI nr
Match: XP_031742657.1 (uncharacterized protein LOC116404426 [Cucumis sativus] >XP_031742658.1 uncharacterized protein LOC116404426 [Cucumis sativus] >XP_031742659.1 uncharacterized protein LOC116404426 [Cucumis sativus]) HSP 1 Score: 91.7 bits (226), Expect = 3.0e-15 Identity = 44/76 (57.89%), Postives = 55/76 (72.37%), Query Frame = 0
BLAST of Lcy05g015200 vs. NCBI nr
Match: KAA0045008.1 (retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 91.3 bits (225), Expect = 3.9e-15 Identity = 41/76 (53.95%), Postives = 55/76 (72.37%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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