Lcy05g015160 (gene) Sponge gourd (P93075) v1

Overview
NameLcy05g015160
Typegene
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionTranspos_assoc domain-containing protein
LocationChr05: 18783049 .. 18783678 (+)
RNA-Seq ExpressionLcy05g015160
SyntenyLcy05g015160
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAATGCAATGTGGCAGTCATTAGATGGGGTGGAGCAACATCTATTCACATATGAAATATCTCCCTCTTATAGTCGATGGATTCCTCATGGAGAACCAGTTGACTTGTCCAAAGGATTTGAGGTTTGAACAGTTAATTCGATACCAAGTGATCAAGATTTAGGTATTGATGTGCTTGGTGTTGGGAATGAAGAAAACAAAATGTCGAATAATCTTCTATATGATCTACAGGCTCCAATTGTTGATGCAGATGTAGATGAGGAAAACATTGAGAATGAGATGCCCACTAATGTCCATGCGATTGAGACTTCAAATTCAAGCTTATTTGACGAATTAATGAATGAAGCTTGTAATCAGTTATATCCTGGTTGTACCCTATTTTCTTCATTGTACTTTATGGTTAAGTTGATGCATATTAAGGTCATCAACGAATGGAGTAACAAGTCATTTGATATGTTATTGTTGGAGTTATTAAAAGAGGCTTTTCCTAACGGAATGAAAATACCCTTTTCATTTTATGAATCTAAGAGAAAATTACGTGACTTAAGGCTAGGATATGAATCCATCCATGCTTGCAAGTACGATTGCTATTGTATTGGAAAGAATTTTCCGACTACGAAGAGTGCCTAG

mRNA sequence

ATGAATGCAATGTGGCAGTCATTAGATGGGGTGGAGCAACATCTATTCACATATGAAATATCTCCCTCTTATAGTCGATGGATTCCTCATGGAGAACCAGTTGACTTGTCCAAAGGATTTGAGGCTCCAATTGTTGATGCAGATGTAGATGAGGAAAACATTGAGAATGAGATGCCCACTAATGTCCATGCGATTGAGACTTCAAATTCAAGCTTATTTGACGAATTAATGAATGAAGCTTGTAATCAGTTATATCCTGGTTGTACCCTATTTTCTTCATTGTACTTTATGGTTAAGTTGATGCATATTAAGGTCATCAACGAATGGAGTAACAAGTCATTTGATATGTTATTGTTGGAGTTATTAAAAGAGGCTTTTCCTAACGGAATGAAAATACCCTTTTCATTTTATGAATCTAAGAGAAAATTACGTGACTTAAGGCTAGGATATGAATCCATCCATGCTTGCAAGTACGATTGCTATTGTATTGGAAAGAATTTTCCGACTACGAAGAGTGCCTAG

Coding sequence (CDS)

ATGAATGCAATGTGGCAGTCATTAGATGGGGTGGAGCAACATCTATTCACATATGAAATATCTCCCTCTTATAGTCGATGGATTCCTCATGGAGAACCAGTTGACTTGTCCAAAGGATTTGAGGCTCCAATTGTTGATGCAGATGTAGATGAGGAAAACATTGAGAATGAGATGCCCACTAATGTCCATGCGATTGAGACTTCAAATTCAAGCTTATTTGACGAATTAATGAATGAAGCTTGTAATCAGTTATATCCTGGTTGTACCCTATTTTCTTCATTGTACTTTATGGTTAAGTTGATGCATATTAAGGTCATCAACGAATGGAGTAACAAGTCATTTGATATGTTATTGTTGGAGTTATTAAAAGAGGCTTTTCCTAACGGAATGAAAATACCCTTTTCATTTTATGAATCTAAGAGAAAATTACGTGACTTAAGGCTAGGATATGAATCCATCCATGCTTGCAAGTACGATTGCTATTGTATTGGAAAGAATTTTCCGACTACGAAGAGTGCCTAG

Protein sequence

MNAMWQSLDGVEQHLFTYEISPSYSRWIPHGEPVDLSKGFEAPIVDADVDEENIENEMPTNVHAIETSNSSLFDELMNEACNQLYPGCTLFSSLYFMVKLMHIKVINEWSNKSFDMLLLELLKEAFPNGMKIPFSFYESKRKLRDLRLGYESIHACKYDCYCIGKNFPTTKSA
Homology
BLAST of Lcy05g015160 vs. ExPASy TrEMBL
Match: A0A5D3C5I5 (Phytocyanin domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold163G001090 PE=4 SV=1)

HSP 1 Score: 191.0 bits (484), Expect = 4.0e-45
Identity = 105/197 (53.30%), Postives = 126/197 (63.96%), Query Frame = 0

Query: 1   MNAMWQSLDGVEQHLFTYEISPSYSRWIPHGEPVDLSKGFE------------------- 60
           MN+MW+SL+GVE+HL T  ISPSY  WI HGE V+L +G E                   
Sbjct: 271 MNSMWESLEGVERHLLTVGISPSYVNWIYHGERVNLPRGLERVATHLHHDDEGTSNLFEQ 330

Query: 61  -----------APIVDADVDEENIENEMPTNVHAIETSNSSLFDELMNEACNQLYPGCTL 120
                       PI + +  EE  ENEMP +    +T  +SLF++LMNEA N+LYPGC+ 
Sbjct: 331 NEMLDLLNDLQVPIENEEETEEAFENEMPFDDDQQDT--TSLFEDLMNEARNELYPGCSK 390

Query: 121 FSSLYFMVKLMHIKVINEWSNKSFDMLLLELLKEAFPNGMKIPFSFYESKRKLRDLRLGY 168
           FSSL F+VKLM IKV+N WSNKSFDM LL++LK AFP G  IP SF+E+KRKL DL LGY
Sbjct: 391 FSSLNFLVKLMRIKVLNGWSNKSFDM-LLKMLKAAFPAGTIIPTSFFEAKRKLHDLGLGY 450

BLAST of Lcy05g015160 vs. ExPASy TrEMBL
Match: A0A5A7SP00 (CACTA transposable element OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold34G002580 PE=4 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 2.4e-42
Identity = 105/205 (51.22%), Postives = 129/205 (62.93%), Query Frame = 0

Query: 2   NAMWQSLDGVEQHLFTYEISPSYSRWIPHGEPVDLSK-------------GFEAPIVDAD 61
           N+M Q+LD VE+HLFTY IS  Y++W+ HGE  +L++               E+ I D D
Sbjct: 28  NSMTQTLDVVERHLFTYGISSVYNKWVYHGEATNLARFERGASSSEGERLSRESNIGDED 87

Query: 62  VD---------------EEN------IENEMPTNVHAIETSNSSLFDELMNEACNQLYPG 121
            D               EEN       ++E+P +V  I TSN  +F+ELMNEA N LYPG
Sbjct: 88  DDILDLLTDLQGSMIAREENFDDGDGFDDEVPEDVDEINTSN--VFEELMNEARNPLYPG 147

Query: 122 CTLFSSLYFMVKLMHIKVINEWSNKSFDMLLLELLKEAFPNGMKIPFSFYESKRKLRDLR 173
           CT FSSL F+VKLMHIKV+N WSNKSFDM LLELLK+AFP G  IP S YE+KR+L D+ 
Sbjct: 148 CTKFSSLNFLVKLMHIKVLNNWSNKSFDM-LLELLKDAFPIGTYIPKSLYEAKRRLCDIG 207

BLAST of Lcy05g015160 vs. ExPASy TrEMBL
Match: A0A1S3C1V3 (uncharacterized protein LOC103495895 OS=Cucumis melo OX=3656 GN=LOC103495895 PE=4 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 2.4e-42
Identity = 105/205 (51.22%), Postives = 129/205 (62.93%), Query Frame = 0

Query: 2   NAMWQSLDGVEQHLFTYEISPSYSRWIPHGEPVDLSK-------------GFEAPIVDAD 61
           N+M Q+LD VE+HLFTY IS  Y++W+ HGE  +L++               E+ I D D
Sbjct: 28  NSMTQTLDVVERHLFTYGISSVYNKWVYHGEATNLARFERGASSSEGERLSRESNIGDED 87

Query: 62  VD---------------EEN------IENEMPTNVHAIETSNSSLFDELMNEACNQLYPG 121
            D               EEN       ++E+P +V  I TSN  +F+ELMNEA N LYPG
Sbjct: 88  DDILDLLTDLQGSMIAREENFDDGDGFDDEVPEDVDEINTSN--VFEELMNEARNPLYPG 147

Query: 122 CTLFSSLYFMVKLMHIKVINEWSNKSFDMLLLELLKEAFPNGMKIPFSFYESKRKLRDLR 173
           CT FSSL F+VKLMHIKV+N WSNKSFDM LLELLK+AFP G  IP S YE+KR+L D+ 
Sbjct: 148 CTKFSSLNFLVKLMHIKVLNNWSNKSFDM-LLELLKDAFPIGTYIPKSLYEAKRRLCDIG 207

BLAST of Lcy05g015160 vs. ExPASy TrEMBL
Match: A0A5A7T9T1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold36G003190 PE=4 SV=1)

HSP 1 Score: 177.6 bits (449), Expect = 4.6e-41
Identity = 101/203 (49.75%), Postives = 124/203 (61.08%), Query Frame = 0

Query: 4   MWQSLDGVEQHLFTYEISPSYSRWIPHGEPVDLSK-------------GFEAPIVDAD-- 63
           M Q+LDGVE+HLFTY IS  Y++W+ HGE  +L++               EA + D D  
Sbjct: 1   MTQTLDGVERHLFTYGISSVYNKWVYHGEATNLARFERGATSSEGDTLSREANVGDEDDD 60

Query: 64  -------------------VDEENIENEMPTNVHAIETSNSSLFDELMNEACNQLYPGCT 123
                               D +  ++E P +V  ++TSN  +F+ELM EA N LY GCT
Sbjct: 61  ILDLLNDLQGSMIAREEDFDDGDGFDDEFPEDVDEMDTSN--IFEELMKEARNPLYHGCT 120

Query: 124 LFSSLYFMVKLMHIKVINEWSNKSFDMLLLELLKEAFPNGMKIPFSFYESKRKLRDLRLG 173
            FSSL F+VKLMHIKV+N WSNKSFDM LLELLK+AFP G  IP SFYE+KRKL DL LG
Sbjct: 121 KFSSLNFLVKLMHIKVLNNWSNKSFDM-LLELLKDAFPVGTYIPKSFYEAKRKLCDLGLG 180

BLAST of Lcy05g015160 vs. ExPASy TrEMBL
Match: A0A5A7V6L2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1290G00290 PE=4 SV=1)

HSP 1 Score: 176.0 bits (445), Expect = 1.3e-40
Identity = 101/203 (49.75%), Postives = 124/203 (61.08%), Query Frame = 0

Query: 4   MWQSLDGVEQHLFTYEISPSYSRWIPHGEPVDLSK-------------GFEAPIVDAD-- 63
           M Q+LD VE+HLFTY IS  Y++W+ HGE  +L++               EA + D D  
Sbjct: 1   MTQTLDRVERHLFTYGISSVYNKWVYHGEATNLARFERGATSSEGDTLSREANVGDEDDD 60

Query: 64  -------------------VDEENIENEMPTNVHAIETSNSSLFDELMNEACNQLYPGCT 123
                               D +  ++E P +V  ++TSN  +F+ELM EA N LY GCT
Sbjct: 61  ILDLLNDLQGSMIAREEDFDDGDGFDDEFPEDVDEMDTSN--IFEELMKEARNPLYHGCT 120

Query: 124 LFSSLYFMVKLMHIKVINEWSNKSFDMLLLELLKEAFPNGMKIPFSFYESKRKLRDLRLG 173
            FSSL F+VKLMHIKV+N WSNKSFDM LLELLK+AFP G  IP SFYE+KRKL DL LG
Sbjct: 121 KFSSLNFLVKLMHIKVLNNWSNKSFDM-LLELLKDAFPVGTYIPKSFYEAKRKLCDLGLG 180

BLAST of Lcy05g015160 vs. NCBI nr
Match: KAA0050152.1 (uncharacterized protein E6C27_scaffold675G001830 [Cucumis melo var. makuwa] >TYK06408.1 uncharacterized protein E5676_scaffold163G001090 [Cucumis melo var. makuwa])

HSP 1 Score: 191.0 bits (484), Expect = 8.3e-45
Identity = 105/197 (53.30%), Postives = 126/197 (63.96%), Query Frame = 0

Query: 1   MNAMWQSLDGVEQHLFTYEISPSYSRWIPHGEPVDLSKGFE------------------- 60
           MN+MW+SL+GVE+HL T  ISPSY  WI HGE V+L +G E                   
Sbjct: 271 MNSMWESLEGVERHLLTVGISPSYVNWIYHGERVNLPRGLERVATHLHHDDEGTSNLFEQ 330

Query: 61  -----------APIVDADVDEENIENEMPTNVHAIETSNSSLFDELMNEACNQLYPGCTL 120
                       PI + +  EE  ENEMP +    +T  +SLF++LMNEA N+LYPGC+ 
Sbjct: 331 NEMLDLLNDLQVPIENEEETEEAFENEMPFDDDQQDT--TSLFEDLMNEARNELYPGCSK 390

Query: 121 FSSLYFMVKLMHIKVINEWSNKSFDMLLLELLKEAFPNGMKIPFSFYESKRKLRDLRLGY 168
           FSSL F+VKLM IKV+N WSNKSFDM LL++LK AFP G  IP SF+E+KRKL DL LGY
Sbjct: 391 FSSLNFLVKLMRIKVLNGWSNKSFDM-LLKMLKAAFPAGTIIPTSFFEAKRKLHDLGLGY 450

BLAST of Lcy05g015160 vs. NCBI nr
Match: XP_008455800.1 (PREDICTED: uncharacterized protein LOC103495895 [Cucumis melo] >KAA0025951.1 CACTA transposable element [Cucumis melo var. makuwa])

HSP 1 Score: 181.8 bits (460), Expect = 5.0e-42
Identity = 105/205 (51.22%), Postives = 129/205 (62.93%), Query Frame = 0

Query: 2   NAMWQSLDGVEQHLFTYEISPSYSRWIPHGEPVDLSK-------------GFEAPIVDAD 61
           N+M Q+LD VE+HLFTY IS  Y++W+ HGE  +L++               E+ I D D
Sbjct: 28  NSMTQTLDVVERHLFTYGISSVYNKWVYHGEATNLARFERGASSSEGERLSRESNIGDED 87

Query: 62  VD---------------EEN------IENEMPTNVHAIETSNSSLFDELMNEACNQLYPG 121
            D               EEN       ++E+P +V  I TSN  +F+ELMNEA N LYPG
Sbjct: 88  DDILDLLTDLQGSMIAREENFDDGDGFDDEVPEDVDEINTSN--VFEELMNEARNPLYPG 147

Query: 122 CTLFSSLYFMVKLMHIKVINEWSNKSFDMLLLELLKEAFPNGMKIPFSFYESKRKLRDLR 173
           CT FSSL F+VKLMHIKV+N WSNKSFDM LLELLK+AFP G  IP S YE+KR+L D+ 
Sbjct: 148 CTKFSSLNFLVKLMHIKVLNNWSNKSFDM-LLELLKDAFPIGTYIPKSLYEAKRRLCDIG 207

BLAST of Lcy05g015160 vs. NCBI nr
Match: KAA0038099.1 (uncharacterized protein E6C27_scaffold36G003190 [Cucumis melo var. makuwa])

HSP 1 Score: 177.6 bits (449), Expect = 9.5e-41
Identity = 101/203 (49.75%), Postives = 124/203 (61.08%), Query Frame = 0

Query: 4   MWQSLDGVEQHLFTYEISPSYSRWIPHGEPVDLSK-------------GFEAPIVDAD-- 63
           M Q+LDGVE+HLFTY IS  Y++W+ HGE  +L++               EA + D D  
Sbjct: 1   MTQTLDGVERHLFTYGISSVYNKWVYHGEATNLARFERGATSSEGDTLSREANVGDEDDD 60

Query: 64  -------------------VDEENIENEMPTNVHAIETSNSSLFDELMNEACNQLYPGCT 123
                               D +  ++E P +V  ++TSN  +F+ELM EA N LY GCT
Sbjct: 61  ILDLLNDLQGSMIAREEDFDDGDGFDDEFPEDVDEMDTSN--IFEELMKEARNPLYHGCT 120

Query: 124 LFSSLYFMVKLMHIKVINEWSNKSFDMLLLELLKEAFPNGMKIPFSFYESKRKLRDLRLG 173
            FSSL F+VKLMHIKV+N WSNKSFDM LLELLK+AFP G  IP SFYE+KRKL DL LG
Sbjct: 121 KFSSLNFLVKLMHIKVLNNWSNKSFDM-LLELLKDAFPVGTYIPKSFYEAKRKLCDLGLG 180

BLAST of Lcy05g015160 vs. NCBI nr
Match: KAA0063743.1 (uncharacterized protein E6C27_scaffold1290G00290 [Cucumis melo var. makuwa])

HSP 1 Score: 176.0 bits (445), Expect = 2.8e-40
Identity = 101/203 (49.75%), Postives = 124/203 (61.08%), Query Frame = 0

Query: 4   MWQSLDGVEQHLFTYEISPSYSRWIPHGEPVDLSK-------------GFEAPIVDAD-- 63
           M Q+LD VE+HLFTY IS  Y++W+ HGE  +L++               EA + D D  
Sbjct: 1   MTQTLDRVERHLFTYGISSVYNKWVYHGEATNLARFERGATSSEGDTLSREANVGDEDDD 60

Query: 64  -------------------VDEENIENEMPTNVHAIETSNSSLFDELMNEACNQLYPGCT 123
                               D +  ++E P +V  ++TSN  +F+ELM EA N LY GCT
Sbjct: 61  ILDLLNDLQGSMIAREEDFDDGDGFDDEFPEDVDEMDTSN--IFEELMKEARNPLYHGCT 120

Query: 124 LFSSLYFMVKLMHIKVINEWSNKSFDMLLLELLKEAFPNGMKIPFSFYESKRKLRDLRLG 173
            FSSL F+VKLMHIKV+N WSNKSFDM LLELLK+AFP G  IP SFYE+KRKL DL LG
Sbjct: 121 KFSSLNFLVKLMHIKVLNNWSNKSFDM-LLELLKDAFPVGTYIPKSFYEAKRKLCDLGLG 180

BLAST of Lcy05g015160 vs. NCBI nr
Match: TYK18968.1 (uncharacterized protein E5676_scaffold418G00580 [Cucumis melo var. makuwa])

HSP 1 Score: 169.1 bits (427), Expect = 3.4e-38
Identity = 94/204 (46.08%), Postives = 124/204 (60.78%), Query Frame = 0

Query: 1   MNAMWQSLDGVEQHLFTYEISPSYSRWIPHGEPVD------------------------- 60
           +N  W SL+GVE+HL T  ISP Y+ W+ HGE +                          
Sbjct: 119 LNLNWSSLEGVERHLLTIGISPYYTEWVYHGESLSYRGTENFEEGTSSNPFNEGTSSTQF 178

Query: 61  --------LSKGFEAPIV-DADVDEENIENEMPTN--VHAIETSNSSLFDELMNEACNQL 120
                   +    +API  + +++E  +E+EM  N  V+  E + +++F +L+N+A N+L
Sbjct: 179 NEEGDIFGMLNDLQAPIEHEEEIEEFRLEDEMAMNVGVNIDEDTTNNIFQDLLNQARNEL 238

Query: 121 YPGCTLFSSLYFMVKLMHIKVINEWSNKSFDMLLLELLKEAFPN-GMKIPFSFYESKRKL 168
           YPGC+ FSSL F+VKLMH+KV+N WSNKSFDM LLELL+ AFP     IP SFYE+KRKL
Sbjct: 239 YPGCSEFSSLNFLVKLMHVKVLNGWSNKSFDM-LLELLRAAFPMCNSTIPSSFYEAKRKL 298

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5D3C5I54.0e-4553.30Phytocyanin domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=... [more]
A0A5A7SP002.4e-4251.22CACTA transposable element OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaff... [more]
A0A1S3C1V32.4e-4251.22uncharacterized protein LOC103495895 OS=Cucumis melo OX=3656 GN=LOC103495895 PE=... [more]
A0A5A7T9T14.6e-4149.75Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5A7V6L21.3e-4049.75Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
Match NameE-valueIdentityDescription
KAA0050152.18.3e-4553.30uncharacterized protein E6C27_scaffold675G001830 [Cucumis melo var. makuwa] >TYK... [more]
XP_008455800.15.0e-4251.22PREDICTED: uncharacterized protein LOC103495895 [Cucumis melo] >KAA0025951.1 CAC... [more]
KAA0038099.19.5e-4149.75uncharacterized protein E6C27_scaffold36G003190 [Cucumis melo var. makuwa][more]
KAA0063743.12.8e-4049.75uncharacterized protein E6C27_scaffold1290G00290 [Cucumis melo var. makuwa][more]
TYK18968.13.4e-3846.08uncharacterized protein E5676_scaffold418G00580 [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR10775UNCHARACTERIZEDcoord: 4..168
NoneNo IPR availablePANTHERPTHR10775:SF149TRANSPOSASE-ASSOCIATED DOMAIN-CONTAINING PROTEIN-RELATEDcoord: 4..168

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lcy05g015160.1Lcy05g015160.1mRNA