Lcy05g014960 (gene) Sponge gourd (P93075) v1

Overview
NameLcy05g014960
Typegene
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Descriptiontrafficking protein particle complex subunit 2-like protein
LocationChr05: 18479095 .. 18482149 (+)
RNA-Seq ExpressionLcy05g014960
SyntenyLcy05g014960
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GATACAATGGTTCACGAGTATTTTTTTTATAATTTAACATTTTTTTTCGAAGGACCTATTTGAAACTTCCTTTTTCTTCTCACCCCTTCGTGGTATCGCAACCGGGAAATTCGCATAGCCCAGCAGAAGAAATCCAACCGGCCACCGTCGAAGATGATCGTCTGCGTCGCCGTCGTCGGCCACCAGGTGCGACCATATTTTCTGGATCCGAAAGAATTTCATATCTGTTTATACGAAAAGATTTGTGATCCTTTTTCAATTCGGGCCGAGCTAACAGAACAACCCCCTCTACATTCAAAGCTTCACGGAGGCCGATGATGCTCTCAAGCTCCACCACATTGTTCACTGTTCGCTGGATGTCGTCGATGAGCGAGGTATAATTCTTGCTTGCCTTGGTGTTTTGTTGCTTGTAATTAGATCTCGTTTTCGTGATGATTTTCAAACTTTGACGATTTTTGTGTCTTGCGGACTTCAATTCTTTCTTCTGATATTGCTTGTGTTGTTGCTACTAGTGAACAATCCGAGAAAATCTGGGCCGACCTTGAACGAGACCTTTCTCGGTCTTCTTTATCCGACTGAAAATTACAAAGTGTGAGTGAGATCGTTTCTGTGGATATTACGAATTAGTCAGGGGTTTTTTCATTTTCATATCAAGTAGGATCAGAATGTTTCTTCCTTTCTATTTCAATTGGAGTGGACCTTTAATGTTCTGTATGATCGAACTCATTTCCAGGTATGGCTATTTGACTAATACCAAAGTGAAGTTTATTATGGTGACCACAGATCTAGATGTCAGAGATGCTGATGTGAGAAATGTGAGTACCATTATGGATTTGCAATTTTCTACAGCAGTATAGATCTTTAGAATTTTCACTTGTGAACTATCACTGTAAGGTAACTCTGAAGATGAAAAATTCTAGGGTGTTGTTTATTAGTGAAGATGTTTGTGATGCAAGCACTTCACGTCTGGCTCCTCTCATTTGTTGTCCTTTAGAAGTTCTCTTTCAACGATAAAGGGTAGCCTTTCTCAAGCTAGCTGTTTTACTAGTGATGTGAACATAATATATTCCTAGAGAGGAGTCCTATCACAATTGTTTATACTTCCTTCACGGCCAGTTAAAACTACAATCGGTGTCTGTTGGTATCTCGAACGACCTTCTTATGCTCGAAATGTACACACCCTTTGATCACTAAGTACGCATCATCTGATCATAGATTATTGTCTATGAAGATGAGACATTTCAGGCTATTGTCTCTATCAAGACGTTGGTGATTTAGGCAAAATAATATCTCCATGTATTCAGTGTCTATGGATTTTATCTTCTAATGACAGAAGTCATCACAGGGTAGCTAGTTTAGTAAGAAACTGATGTGAACATGCGATAAAATTTCTTAGAACACCACATGGCTGTAGGACAACAGAATAGTGTGCAAACGTTGATTCTTTGTTTTCATATAAGAAAGCACCTTCGCCTCTTATCATTTGTACTATAACTTGATAGTTCAAGTTTGCTTGATTGTATATGTGACAACTCTTGCTCTTCGAGGGAGCTTTGGTTCATGAATTTGAAAAGTCTGAGTTTGATAGTTTGGATTAGGAAGTCTAGTATTTTGTAGCTTATATTTGGATTGTAAGGACCTAAGAAGCACAAACACTTTATTTTGGCTAGCGTGTCTGTGTCTGATACATGTCAAACACTTGGACACTCTGATACTTGTTGGAAACGTATCGGACACTTGTTAGTACAATTGATATGTGGCAAACACTAGTTGTAGGTTCATATCGAACACTTGTGAAGTATACTAAATAGACACAATACTTAACGAAGAAAATAACAAATTTTAAGAGTGAAATACGTTAAACTCATTTTTTAAGCATACAAGCATAAACTTATTGATTTTGAATTTTCTTCTTGTATAAAAAAGATATATATTTTTAAAAATGTGTATTTTTCTAAACGTGTCGGTGTCCTAGATTTAAAAAAAAAAAATGACGTGTCACTGTGTCTGTGTCTCGTGACCGTATCTGTGCTTCTTAGGTAAGAGTCATTTGCGCTTTTGTATAGCTTGTGTTTGGTCTGTGGGTTGATATAAGTTTATGTAGTCAATGGAATTTGTAAACTAGTAGTTCGAGATAAGTCACATATTATAGGTAGGTTCAACTTTCTTATTCCAAGTCAATATAAATTCCAGAAATAGTTATTCCACTTTGTTATTGCAATTGATCCACCCTCTTTCTCTTATATATTGTTTACAACTATTTCTTTTCTGAAAAAGTATTGTAAATTCAGCCAACCTTGGTTCCACCTTGCGTATTTATACACTATGTTGCATACACGAAACTTATCAATAATATGACATCTGTTGCATTCTGTTGCATTCTCGAATTTGTGTCCAGTTTTTCCGGAGATTTCATGCTGCATATGTGGATGCAGTTTCAAACCCATTTCATGTACCAGGTAAGAAAATTACTTCCAAAACTTTTGCAGAAAGTGTGAGCACCATTGTCAAGTCGTTTGGGTTCAGTTCAGCTGTTTGAGTAACCAACCTGGCAATCACTGACGTGTAGAAGTGAAACTTGAATACCGAGTCTGAAAGCCATCGACAGCTATGGTTCATGCTGTGTCTACTCATCTTTCTTGTTCTATTGATTTGAAATATTTTTCTCGAATTGTGTTAAGAAGGATGAAACAAACTGTTGATGTCTTTTTTTTAGTTTTTCGTAAAACAATGCAACTTCATTGATTGGCATTTACAGTTTCTAGTTTGTGCTGTCTTACATGACGTTAGGTGCTATTTTCTTCACATTGCAAGATTGAAAGGTGAGAATGAAGAGGTTGGCTCATGTTTTTAGTAAGTTTATTGTTTATCAAGTTTAGAGTTGGTTAGTCTAAATTTGTACCATTTGTGTTTCCTTAAATGAAAGGTGCAAATTTAGATTTTTGGAACTTTTATTTGATCCATTGGTTATAATTTGTAAACTTTTTGTTGAGTTCAACAATATTTAGGGAGGGAGGATTTGAACTCCTGACCTCTTGGTCAAGTGTATATGCCA

mRNA sequence

GATACAATGGTTCACGAGTATTTTTTTTATAATTTAACATTTTTTTTCGAAGGACCTATTTGAAACTTCCTTTTTCTTCTCACCCCTTCGTGGTATCGCAACCGGGAAATTCGCATAGCCCAGCAGAAGAAATCCAACCGGCCACCGTCGAAGATGATCGTCTGCGTCGCCGTCGTCGGCCACCAGAACAACCCCCTCTACATTCAAAGCTTCACGGAGGCCGATGATGCTCTCAAGCTCCACCACATTGTTCACTGTTCGCTGGATGTCGTCGATGAGCGAGTGAACAATCCGAGAAAATCTGGGCCGACCTTGAACGAGACCTTTCTCGGTCTTCTTTATCCGACTGAAAATTACAAAGTGTATGGCTATTTGACTAATACCAAAGTGAAGTTTATTATGGTGACCACAGATCTAGATGTCAGAGATGCTGATGTGAGAAATTTTTTCCGGAGATTTCATGCTGCATATGTGGATGCAGTTTCAAACCCATTTCATGTACCAGGTAAGAAAATTACTTCCAAAACTTTTGCAGAAAGTGTGAGCACCATTGTCAAGTCGTTTGGGTTCAGTTCAGCTGTTTGAGTAACCAACCTGGCAATCACTGACGTGTAGAAGTGAAACTTGAATACCGAGTCTGAAAGCCATCGACAGCTATGGTTCATGCTGTGTCTACTCATCTTTCTTGTTCTATTGATTTGAAATATTTTTCTCGAATTGTGTTAAGAAGGATGAAACAAACTGTTGATGTCTTTTTTTTAGTTTTTCGTAAAACAATGCAACTTCATTGATTGGCATTTACAGTTTCTAGTTTGTGCTGTCTTACATGACGTTAGGTGCTATTTTCTTCACATTGCAAGATTGAAAGGTGAGAATGAAGAGGTTGGCTCATGTTTTTAGTAAGTTTATTGTTTATCAAGTTTAGAGTTGGTTAGTCTAAATTTGTACCATTTGTGTTTCCTTAAATGAAAGGTGCAAATTTAGATTTTTGGAACTTTTATTTGATCCATTGGTTATAATTTGTAAACTTTTTGTTGAGTTCAACAATATTTAGGGAGGGAGGATTTGAACTCCTGACCTCTTGGTCAAGTGTATATGCCA

Coding sequence (CDS)

ATGATCGTCTGCGTCGCCGTCGTCGGCCACCAGAACAACCCCCTCTACATTCAAAGCTTCACGGAGGCCGATGATGCTCTCAAGCTCCACCACATTGTTCACTGTTCGCTGGATGTCGTCGATGAGCGAGTGAACAATCCGAGAAAATCTGGGCCGACCTTGAACGAGACCTTTCTCGGTCTTCTTTATCCGACTGAAAATTACAAAGTGTATGGCTATTTGACTAATACCAAAGTGAAGTTTATTATGGTGACCACAGATCTAGATGTCAGAGATGCTGATGTGAGAAATTTTTTCCGGAGATTTCATGCTGCATATGTGGATGCAGTTTCAAACCCATTTCATGTACCAGGTAAGAAAATTACTTCCAAAACTTTTGCAGAAAGTGTGAGCACCATTGTCAAGTCGTTTGGGTTCAGTTCAGCTGTTTGA

Protein sequence

MIVCVAVVGHQNNPLYIQSFTEADDALKLHHIVHCSLDVVDERVNNPRKSGPTLNETFLGLLYPTENYKVYGYLTNTKVKFIMVTTDLDVRDADVRNFFRRFHAAYVDAVSNPFHVPGKKITSKTFAESVSTIVKSFGFSSAV
Homology
[Close]
BLAST of Lcy05g014960 vs. ExPASy Swiss-Prot
Match: Q54CU7 (Trafficking protein particle complex subunit 2-like protein OS=Dictyostelium discoideum OX=44689 GN=trappc2l PE=3 SV=1)

HSP 1 Score: 145.2 bits (365), Expect = 5.7e-34
Identity = 68/139 (48.92%), Postives = 102/139 (73.38%), Query Frame = 0 

Query: 2   IVCVAVVGHQNNPLYIQSFTEA---DDALKLHHIVHCSLDVVDERVNNPRKSGPTLNETF 61
           IVCVA+VG  NNPL+IQ F+ +   ++ LKLH+IVHCSLD+++++  + +K     ++ +
Sbjct: 4   IVCVAIVGKGNNPLFIQDFSSSITDENKLKLHYIVHCSLDIIEDKPGSNKK---LPSDMY 63

Query: 62  LGLLYPTENYKVYGYLTNTKVKFIMVTTDL-DVRDADVRNFFRRFHAAYVDAVSNPFHVP 121
           LGLLYPTE+YKVYGYLTNTK+KFI+V  D  D++D+D++ FF+R    +++  SNPF+ P
Sbjct: 64  LGLLYPTEDYKVYGYLTNTKIKFIIVVLDTSDIKDSDLKLFFKRLQTLFINTTSNPFYKP 123

Query: 122 GKKITSKTFAESVSTIVKS 137
             K+ SK F + V+ +V S
Sbjct: 124 NSKVESKKFLQEVTNLVPS 139

[Close]
BLAST of Lcy05g014960 vs. ExPASy Swiss-Prot
Match: Q5M8X5 (Trafficking protein particle complex subunit 2-like protein OS=Xenopus tropicalis OX=8364 GN=trappc2l PE=2 SV=1)

HSP 1 Score: 137.1 bits (344), Expect = 1.5e-31
Identity = 66/136 (48.53%), Postives = 98/136 (72.06%), Query Frame = 0 

Query: 1   MIVCVAVVGHQNNPLYIQSFTEADDALKLHHIVHCSLDVVDERVNNPRKSGPTLNETFLG 60
           M VCVAV+  +N PLYI+S T  ++ LK H+ VH SLDVVDE+++   K+     E +LG
Sbjct: 1   MAVCVAVIAKENYPLYIRS-TPTENQLKFHYTVHTSLDVVDEKISAMGKAVMDQRELYLG 60

Query: 61  LLYPTENYKVYGYLTNTKVKFIMV--TTDLDVRDADVRNFFRRFHAAYVDAVSNPFHVPG 120
           LLYPTE+YKVYGY+TN+KVKF+MV  +++  +RD ++R+ FR+ H +Y D + NPF+ PG
Sbjct: 61  LLYPTEDYKVYGYVTNSKVKFVMVVDSSNTSLRDNEIRSMFRKLHNSYTDVMCNPFYNPG 120

Query: 121 KKITSKTFAESVSTIV 135
             I S+ F  +V++++
Sbjct: 121 DPIQSRAFDNTVTSMM 135

[Close]
BLAST of Lcy05g014960 vs. ExPASy Swiss-Prot
Match: B2RYU6 (Trafficking protein particle complex subunit 2-like protein OS=Rattus norvegicus OX=10116 GN=Trappc2l PE=2 SV=1)

HSP 1 Score: 136.3 bits (342), Expect = 2.6e-31
Identity = 65/136 (47.79%), Postives = 99/136 (72.79%), Query Frame = 0 

Query: 1   MIVCVAVVGHQNNPLYIQSFTEADDALKLHHIVHCSLDVVDERVNNPRKSGPTLNETFLG 60
           M VC+AV+  +N PLYI+S T  ++ LK H++VH SLDVVDE+++   K+     E +LG
Sbjct: 1   MAVCIAVIAKENYPLYIRS-TPTENELKFHYMVHTSLDVVDEKISAMGKALVDQRELYLG 60

Query: 61  LLYPTENYKVYGYLTNTKVKFIMV--TTDLDVRDADVRNFFRRFHAAYVDAVSNPFHVPG 120
           LLYPTE+YKVYGY+TN+KVKF+MV  +++  +RD ++R+ FR+ H +Y D + NPF+ PG
Sbjct: 61  LLYPTEDYKVYGYVTNSKVKFVMVVDSSNTALRDNEIRSMFRKLHNSYTDVMCNPFYNPG 120

Query: 121 KKITSKTFAESVSTIV 135
            +I S+ F   V++++
Sbjct: 121 DRIQSRAFDTMVTSMM 135

[Close]
BLAST of Lcy05g014960 vs. ExPASy Swiss-Prot
Match: Q9JME7 (Trafficking protein particle complex subunit 2-like protein OS=Mus musculus OX=10090 GN=Trappc2l PE=1 SV=1)

HSP 1 Score: 136.0 bits (341), Expect = 3.4e-31
Identity = 65/136 (47.79%), Postives = 98/136 (72.06%), Query Frame = 0 

Query: 1   MIVCVAVVGHQNNPLYIQSFTEADDALKLHHIVHCSLDVVDERVNNPRKSGPTLNETFLG 60
           M VC+AV+  +N PLYI+S T  +  LK H++VH SLDVVDE+++   K+     E +LG
Sbjct: 1   MAVCIAVIAKENYPLYIRS-TPTESELKFHYMVHTSLDVVDEKISAMGKALVDQRELYLG 60

Query: 61  LLYPTENYKVYGYLTNTKVKFIMV--TTDLDVRDADVRNFFRRFHAAYVDAVSNPFHVPG 120
           LLYPTE+YKVYGY+TN+KVKF+MV  +++  +RD ++R+ FR+ H +Y D + NPF+ PG
Sbjct: 61  LLYPTEDYKVYGYVTNSKVKFVMVVDSSNTALRDNEIRSMFRKLHNSYTDVMCNPFYNPG 120

Query: 121 KKITSKTFAESVSTIV 135
            +I S+ F   V++++
Sbjct: 121 DRIQSRAFDTMVTSMM 135

[Close]
BLAST of Lcy05g014960 vs. ExPASy Swiss-Prot
Match: A6H7F7 (Trafficking protein particle complex subunit 2-like protein OS=Bos taurus OX=9913 GN=TRAPPC2L PE=2 SV=1)

HSP 1 Score: 134.4 bits (337), Expect = 1.0e-30
Identity = 65/136 (47.79%), Postives = 98/136 (72.06%), Query Frame = 0 

Query: 1   MIVCVAVVGHQNNPLYIQSFTEADDALKLHHIVHCSLDVVDERVNNPRKSGPTLNETFLG 60
           M VCVAV+  +N PLYI+S    ++ LK H++VH SLDVVDE+++   K+     E +LG
Sbjct: 1   MAVCVAVIAKENYPLYIRSI-PTENELKFHYMVHTSLDVVDEKISAMGKALVDQRELYLG 60

Query: 61  LLYPTENYKVYGYLTNTKVKFIMV--TTDLDVRDADVRNFFRRFHAAYVDAVSNPFHVPG 120
           LLYPTE+YKVYGY+TN+KVKF+MV  +++  +RD ++R+ FR+ H +Y D + NPF+ PG
Sbjct: 61  LLYPTEDYKVYGYVTNSKVKFVMVVDSSNTALRDNEIRSMFRKLHNSYTDVMCNPFYNPG 120

Query: 121 KKITSKTFAESVSTIV 135
            +I S+ F   V++++
Sbjct: 121 DRIQSRAFDGMVTSMM 135

[Close]
BLAST of Lcy05g014960 vs. ExPASy TrEMBL
Match: A0A6J1JPT4 (Trafficking protein particle complex subunit OS=Cucurbita maxima OX=3661 GN=LOC111486394 PE=3 SV=1)

HSP 1 Score: 290.8 bits (743), Expect = 3.1e-75
Identity = 142/143 (99.30%), Postives = 143/143 (100.00%), Query Frame = 0 

Query: 1   MIVCVAVVGHQNNPLYIQSFTEADDALKLHHIVHCSLDVVDERVNNPRKSGPTLNETFLG 60
           MIVCVAVVGHQNNPLYIQSFTEADDALKLHHIVHCSLDVVDERVNNPRKSGPTLNETFLG
Sbjct: 1   MIVCVAVVGHQNNPLYIQSFTEADDALKLHHIVHCSLDVVDERVNNPRKSGPTLNETFLG 60

Query: 61  LLYPTENYKVYGYLTNTKVKFIMVTTDLDVRDADVRNFFRRFHAAYVDAVSNPFHVPGKK 120
           LLYPTENYKVYGYLTNTKVKFIMVTTDLDVRDADVRNFFRRFHAAYVDAVSNPFHVPGKK
Sbjct: 61  LLYPTENYKVYGYLTNTKVKFIMVTTDLDVRDADVRNFFRRFHAAYVDAVSNPFHVPGKK 120

Query: 121 ITSKTFAESVSTIVKSFGFSSAV 144
           ITSKTFAESVSTIVKSFGFSSA+
Sbjct: 121 ITSKTFAESVSTIVKSFGFSSAI 143

[Close]
BLAST of Lcy05g014960 vs. ExPASy TrEMBL
Match: A0A6J1ERA2 (Trafficking protein particle complex subunit OS=Cucurbita moschata OX=3662 GN=LOC111435157 PE=3 SV=1)

HSP 1 Score: 290.8 bits (743), Expect = 3.1e-75
Identity = 142/143 (99.30%), Postives = 143/143 (100.00%), Query Frame = 0 

Query: 1   MIVCVAVVGHQNNPLYIQSFTEADDALKLHHIVHCSLDVVDERVNNPRKSGPTLNETFLG 60
           MIVCVAVVGHQNNPLYIQSFTEADDALKLHHIVHCSLDVVDERVNNPRKSGPTLNETFLG
Sbjct: 1   MIVCVAVVGHQNNPLYIQSFTEADDALKLHHIVHCSLDVVDERVNNPRKSGPTLNETFLG 60

Query: 61  LLYPTENYKVYGYLTNTKVKFIMVTTDLDVRDADVRNFFRRFHAAYVDAVSNPFHVPGKK 120
           LLYPTENYKVYGYLTNTKVKFIMVTTDLDVRDADVRNFFRRFHAAYVDAVSNPFHVPGKK
Sbjct: 61  LLYPTENYKVYGYLTNTKVKFIMVTTDLDVRDADVRNFFRRFHAAYVDAVSNPFHVPGKK 120

Query: 121 ITSKTFAESVSTIVKSFGFSSAV 144
           ITSKTFAESVSTIVKSFGFSSA+
Sbjct: 121 ITSKTFAESVSTIVKSFGFSSAI 143

[Close]
BLAST of Lcy05g014960 vs. ExPASy TrEMBL
Match: A0A0A0K4Q0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G014480 PE=4 SV=1)

HSP 1 Score: 288.9 bits (738), Expect = 1.2e-74
Identity = 141/143 (98.60%), Postives = 143/143 (100.00%), Query Frame = 0 

Query: 1   MIVCVAVVGHQNNPLYIQSFTEADDALKLHHIVHCSLDVVDERVNNPRKSGPTLNETFLG 60
           MIVCVAVVGHQNNPLYIQSFTEADDALKLHHIVHCSLDVVDERVNNPRKSGPTLNETFLG
Sbjct: 1   MIVCVAVVGHQNNPLYIQSFTEADDALKLHHIVHCSLDVVDERVNNPRKSGPTLNETFLG 60

Query: 61  LLYPTENYKVYGYLTNTKVKFIMVTTDLDVRDADVRNFFRRFHAAYVDAVSNPFHVPGKK 120
           LLYPTENYKVYGYLTNTKVKFIMVTTDLDVRDADVR+FFRRFHAAYVDAVSNPFHVPGKK
Sbjct: 61  LLYPTENYKVYGYLTNTKVKFIMVTTDLDVRDADVRSFFRRFHAAYVDAVSNPFHVPGKK 120

Query: 121 ITSKTFAESVSTIVKSFGFSSAV 144
           ITSKTFAESVSTIVKSFGFSSA+
Sbjct: 121 ITSKTFAESVSTIVKSFGFSSAI 143

[Close]
BLAST of Lcy05g014960 vs. ExPASy TrEMBL
Match: A0A1S3BJH9 (trafficking protein particle complex subunit 2-like protein OS=Cucumis melo OX=3656 GN=LOC103490277 PE=4 SV=1)

HSP 1 Score: 288.9 bits (738), Expect = 1.2e-74
Identity = 141/143 (98.60%), Postives = 143/143 (100.00%), Query Frame = 0 

Query: 1   MIVCVAVVGHQNNPLYIQSFTEADDALKLHHIVHCSLDVVDERVNNPRKSGPTLNETFLG 60
           MIVCVAVVGHQNNPLYIQSFTEADDALKLHHIVHCSLDVVDERVNNPRKSGPTLNETFLG
Sbjct: 1   MIVCVAVVGHQNNPLYIQSFTEADDALKLHHIVHCSLDVVDERVNNPRKSGPTLNETFLG 60

Query: 61  LLYPTENYKVYGYLTNTKVKFIMVTTDLDVRDADVRNFFRRFHAAYVDAVSNPFHVPGKK 120
           LLYPTENYKVYGYLTNTKVKFIMVTTDLDVRDADVR+FFRRFHAAYVDAVSNPFHVPGKK
Sbjct: 61  LLYPTENYKVYGYLTNTKVKFIMVTTDLDVRDADVRSFFRRFHAAYVDAVSNPFHVPGKK 120

Query: 121 ITSKTFAESVSTIVKSFGFSSAV 144
           ITSKTFAESVSTIVKSFGFSSA+
Sbjct: 121 ITSKTFAESVSTIVKSFGFSSAI 143

[Close]
BLAST of Lcy05g014960 vs. ExPASy TrEMBL
Match: A0A6J1C584 (trafficking protein particle complex subunit 2-like protein OS=Momordica charantia OX=3673 GN=LOC111008034 PE=4 SV=1)

HSP 1 Score: 285.8 bits (730), Expect = 9.9e-74
Identity = 139/143 (97.20%), Postives = 143/143 (100.00%), Query Frame = 0 

Query: 1   MIVCVAVVGHQNNPLYIQSFTEADDALKLHHIVHCSLDVVDERVNNPRKSGPTLNETFLG 60
           MIVCVAVVGHQNNPLYIQSFTEADDALKLHHIVHCSLDV++ERVNNPRKSGPTLNETFLG
Sbjct: 1   MIVCVAVVGHQNNPLYIQSFTEADDALKLHHIVHCSLDVIEERVNNPRKSGPTLNETFLG 60

Query: 61  LLYPTENYKVYGYLTNTKVKFIMVTTDLDVRDADVRNFFRRFHAAYVDAVSNPFHVPGKK 120
           LLYPTENYKVYGYLTNTKVKFI+VTTDLDVRDADVR+FFRRFHAAYVDAVSNPFHVPGKK
Sbjct: 61  LLYPTENYKVYGYLTNTKVKFIVVTTDLDVRDADVRSFFRRFHAAYVDAVSNPFHVPGKK 120

Query: 121 ITSKTFAESVSTIVKSFGFSSAV 144
           ITSKTFAESVSTIVKSFGFSSAV
Sbjct: 121 ITSKTFAESVSTIVKSFGFSSAV 143

[Close]
BLAST of Lcy05g014960 vs. NCBI nr
Match: XP_022928280.1 (trafficking protein particle complex subunit 2-like protein [Cucurbita moschata] >XP_022989273.1 trafficking protein particle complex subunit 2-like protein [Cucurbita maxima] >XP_023529813.1 trafficking protein particle complex subunit 2-like protein [Cucurbita pepo subsp. pepo] >KAG7015283.1 Trafficking protein particle complex subunit 2-like protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 290.8 bits (743), Expect = 6.4e-75
Identity = 142/143 (99.30%), Postives = 143/143 (100.00%), Query Frame = 0 

Query: 1   MIVCVAVVGHQNNPLYIQSFTEADDALKLHHIVHCSLDVVDERVNNPRKSGPTLNETFLG 60
           MIVCVAVVGHQNNPLYIQSFTEADDALKLHHIVHCSLDVVDERVNNPRKSGPTLNETFLG
Sbjct: 1   MIVCVAVVGHQNNPLYIQSFTEADDALKLHHIVHCSLDVVDERVNNPRKSGPTLNETFLG 60

Query: 61  LLYPTENYKVYGYLTNTKVKFIMVTTDLDVRDADVRNFFRRFHAAYVDAVSNPFHVPGKK 120
           LLYPTENYKVYGYLTNTKVKFIMVTTDLDVRDADVRNFFRRFHAAYVDAVSNPFHVPGKK
Sbjct: 61  LLYPTENYKVYGYLTNTKVKFIMVTTDLDVRDADVRNFFRRFHAAYVDAVSNPFHVPGKK 120

Query: 121 ITSKTFAESVSTIVKSFGFSSAV 144
           ITSKTFAESVSTIVKSFGFSSA+
Sbjct: 121 ITSKTFAESVSTIVKSFGFSSAI 143

[Close]
BLAST of Lcy05g014960 vs. NCBI nr
Match: KAG6589019.1 (Transcription factor ABORTED MICROSPORES, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 290.8 bits (743), Expect = 6.4e-75
Identity = 142/143 (99.30%), Postives = 143/143 (100.00%), Query Frame = 0 

Query: 1   MIVCVAVVGHQNNPLYIQSFTEADDALKLHHIVHCSLDVVDERVNNPRKSGPTLNETFLG 60
           MIVCVAVVGHQNNPLYIQSFTEADDALKLHHIVHCSLDVVDERVNNPRKSGPTLNETFLG
Sbjct: 603 MIVCVAVVGHQNNPLYIQSFTEADDALKLHHIVHCSLDVVDERVNNPRKSGPTLNETFLG 662

Query: 61  LLYPTENYKVYGYLTNTKVKFIMVTTDLDVRDADVRNFFRRFHAAYVDAVSNPFHVPGKK 120
           LLYPTENYKVYGYLTNTKVKFIMVTTDLDVRDADVRNFFRRFHAAYVDAVSNPFHVPGKK
Sbjct: 663 LLYPTENYKVYGYLTNTKVKFIMVTTDLDVRDADVRNFFRRFHAAYVDAVSNPFHVPGKK 722

Query: 121 ITSKTFAESVSTIVKSFGFSSAV 144
           ITSKTFAESVSTIVKSFGFSSA+
Sbjct: 723 ITSKTFAESVSTIVKSFGFSSAI 745

[Close]
BLAST of Lcy05g014960 vs. NCBI nr
Match: XP_004144858.1 (trafficking protein particle complex subunit 2-like protein [Cucumis sativus] >XP_008447943.1 PREDICTED: trafficking protein particle complex subunit 2-like protein [Cucumis melo] >XP_038887443.1 trafficking protein particle complex subunit 2-like protein [Benincasa hispida] >KGN43262.1 hypothetical protein Csa_020365 [Cucumis sativus])

HSP 1 Score: 288.9 bits (738), Expect = 2.4e-74
Identity = 141/143 (98.60%), Postives = 143/143 (100.00%), Query Frame = 0 

Query: 1   MIVCVAVVGHQNNPLYIQSFTEADDALKLHHIVHCSLDVVDERVNNPRKSGPTLNETFLG 60
           MIVCVAVVGHQNNPLYIQSFTEADDALKLHHIVHCSLDVVDERVNNPRKSGPTLNETFLG
Sbjct: 1   MIVCVAVVGHQNNPLYIQSFTEADDALKLHHIVHCSLDVVDERVNNPRKSGPTLNETFLG 60

Query: 61  LLYPTENYKVYGYLTNTKVKFIMVTTDLDVRDADVRNFFRRFHAAYVDAVSNPFHVPGKK 120
           LLYPTENYKVYGYLTNTKVKFIMVTTDLDVRDADVR+FFRRFHAAYVDAVSNPFHVPGKK
Sbjct: 61  LLYPTENYKVYGYLTNTKVKFIMVTTDLDVRDADVRSFFRRFHAAYVDAVSNPFHVPGKK 120

Query: 121 ITSKTFAESVSTIVKSFGFSSAV 144
           ITSKTFAESVSTIVKSFGFSSA+
Sbjct: 121 ITSKTFAESVSTIVKSFGFSSAI 143

[Close]
BLAST of Lcy05g014960 vs. NCBI nr
Match: XP_022136317.1 (trafficking protein particle complex subunit 2-like protein [Momordica charantia])

HSP 1 Score: 285.8 bits (730), Expect = 2.0e-73
Identity = 139/143 (97.20%), Postives = 143/143 (100.00%), Query Frame = 0 

Query: 1   MIVCVAVVGHQNNPLYIQSFTEADDALKLHHIVHCSLDVVDERVNNPRKSGPTLNETFLG 60
           MIVCVAVVGHQNNPLYIQSFTEADDALKLHHIVHCSLDV++ERVNNPRKSGPTLNETFLG
Sbjct: 1   MIVCVAVVGHQNNPLYIQSFTEADDALKLHHIVHCSLDVIEERVNNPRKSGPTLNETFLG 60

Query: 61  LLYPTENYKVYGYLTNTKVKFIMVTTDLDVRDADVRNFFRRFHAAYVDAVSNPFHVPGKK 120
           LLYPTENYKVYGYLTNTKVKFI+VTTDLDVRDADVR+FFRRFHAAYVDAVSNPFHVPGKK
Sbjct: 61  LLYPTENYKVYGYLTNTKVKFIVVTTDLDVRDADVRSFFRRFHAAYVDAVSNPFHVPGKK 120

Query: 121 ITSKTFAESVSTIVKSFGFSSAV 144
           ITSKTFAESVSTIVKSFGFSSAV
Sbjct: 121 ITSKTFAESVSTIVKSFGFSSAV 143

[Close]
BLAST of Lcy05g014960 vs. NCBI nr
Match: XP_031127945.1 (trafficking protein particle complex subunit 2-like protein [Ipomoea triloba])

HSP 1 Score: 284.3 bits (726), Expect = 6.0e-73
Identity = 138/142 (97.18%), Postives = 141/142 (99.30%), Query Frame = 0 

Query: 1   MIVCVAVVGHQNNPLYIQSFTEADDALKLHHIVHCSLDVVDERVNNPRKSGPTLNETFLG 60
           MIVCVAVVGHQNNPLYIQSFTEADDALKLHHIVHCSLDVVDERVNNP+KSGPTLNETFLG
Sbjct: 1   MIVCVAVVGHQNNPLYIQSFTEADDALKLHHIVHCSLDVVDERVNNPKKSGPTLNETFLG 60

Query: 61  LLYPTENYKVYGYLTNTKVKFIMVTTDLDVRDADVRNFFRRFHAAYVDAVSNPFHVPGKK 120
           LLYPTENYKVYGYLTNTKVKFI+VTTDLDVRDADVRNFFRRFHAAYVDAVSNPFHVPGKK
Sbjct: 61  LLYPTENYKVYGYLTNTKVKFILVTTDLDVRDADVRNFFRRFHAAYVDAVSNPFHVPGKK 120

Query: 121 ITSKTFAESVSTIVKSFGFSSA 143
           ITS+TFAESVSTIVKSFG SSA
Sbjct: 121 ITSRTFAESVSTIVKSFGLSSA 142

[Close]
BLAST of Lcy05g014960 vs. TAIR 10
Match: AT2G20930.1 (SNARE-like superfamily protein )

HSP 1 Score: 256.5 bits (654), Expect = 1.2e-68
Identity = 121/140 (86.43%), Postives = 133/140 (95.00%), Query Frame = 0 

Query: 1   MIVCVAVVGHQNNPLYIQSFTEADDALKLHHIVHCSLDVVDERVNNPRKSGPTLNETFLG 60
           MIVCVAVVGHQNNPLYIQSFT+ADDALKLHHIVHCSLDV++ERVNNP+KSG TLNE FLG
Sbjct: 1   MIVCVAVVGHQNNPLYIQSFTDADDALKLHHIVHCSLDVIEERVNNPKKSGTTLNEAFLG 60

Query: 61  LLYPTENYKVYGYLTNTKVKFIMVTTDLDVRDADVRNFFRRFHAAYVDAVSNPFHVPGKK 120
           LLYPT NYKVYGYLTNTKVKFI+VTTDLDVRD DVR+FFR+FHAAYVDAVSNPFHVPGKK
Sbjct: 61  LLYPTVNYKVYGYLTNTKVKFILVTTDLDVRDTDVRSFFRKFHAAYVDAVSNPFHVPGKK 120

Query: 121 ITSKTFAESVSTIVKSFGFS 141
           ITS+TFA++VS IV S+G +
Sbjct: 121 ITSRTFAQTVSNIVGSYGLN 140

The following BLAST results are available for this feature:
BLAST of Lcy05g014960 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q54CU75.7e-3448.92Trafficking protein particle complex subunit 2-like protein OS=Dictyostelium dis... [more]
Q5M8X51.5e-3148.53Trafficking protein particle complex subunit 2-like protein OS=Xenopus tropicali... [more]
B2RYU62.6e-3147.79Trafficking protein particle complex subunit 2-like protein OS=Rattus norvegicus... [more]
Q9JME73.4e-3147.79Trafficking protein particle complex subunit 2-like protein OS=Mus musculus OX=1... [more]
A6H7F71.0e-3047.79Trafficking protein particle complex subunit 2-like protein OS=Bos taurus OX=991... [more]
BLAST of Lcy05g014960 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1JPT43.1e-7599.30Trafficking protein particle complex subunit OS=Cucurbita maxima OX=3661 GN=LOC1... [more]
A0A6J1ERA23.1e-7599.30Trafficking protein particle complex subunit OS=Cucurbita moschata OX=3662 GN=LO... [more]
A0A0A0K4Q01.2e-7498.60Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G014480 PE=4 SV=1[more]
A0A1S3BJH91.2e-7498.60trafficking protein particle complex subunit 2-like protein OS=Cucumis melo OX=3... [more]
A0A6J1C5849.9e-7497.20trafficking protein particle complex subunit 2-like protein OS=Momordica charant... [more]
BLAST of Lcy05g014960 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022928280.16.4e-7599.30trafficking protein particle complex subunit 2-like protein [Cucurbita moschata]... [more]
KAG6589019.16.4e-7599.30Transcription factor ABORTED MICROSPORES, partial [Cucurbita argyrosperma subsp.... [more]
XP_004144858.12.4e-7498.60trafficking protein particle complex subunit 2-like protein [Cucumis sativus] >X... [more]
XP_022136317.12.0e-7397.20trafficking protein particle complex subunit 2-like protein [Momordica charantia... [more]
XP_031127945.16.0e-7397.18trafficking protein particle complex subunit 2-like protein [Ipomoea triloba][more]
BLAST of Lcy05g014960 vs. TAIR 10
Match NameE-valueIdentityDescription
AT2G20930.11.2e-6886.43SNARE-like superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007233Trafficking protein particle complex subunitSMARTSM01399Sybindin_2coord: 17..137
e-value: 0.0079
score: -8.8
IPR006722Trafficking protein particle complex subunit 2PFAMPF04628Sedlin_Ncoord: 7..135
e-value: 4.3E-34
score: 117.4
IPR006722Trafficking protein particle complex subunit 2PANTHERPTHR12403TRAFFICKING PROTEIN PARTICLE COMPLEX SUBUNIT 2coord: 1..138
NoneNo IPR availableGENE3D3.30.450.70coord: 1..140
e-value: 3.8E-45
score: 154.9
NoneNo IPR availablePANTHERPTHR12403:SF26BNAA06G40850D PROTEINcoord: 1..138
IPR044760Trafficking protein particle complex subunit 2-likeCDDcd14854TRAPPC2Lcoord: 3..134
e-value: 3.26631E-69
score: 203.205
IPR011012Longin-like domain superfamilySUPERFAMILY64356SNARE-likecoord: 2..137

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lcy05g014960.1Lcy05g014960.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport
biological_process GO:0016192 vesicle-mediated transport
cellular_component GO:0005783 endoplasmic reticulum
cellular_component GO:0005794 Golgi apparatus
cellular_component GO:0005634 nucleus
cellular_component GO:0030008 TRAPP complex