Lcy05g014190 (gene) Sponge gourd (P93075) v1

Overview
NameLcy05g014190
Typegene
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionUnknown protein
LocationChr05: 17365588 .. 17366192 (+)
RNA-Seq ExpressionLcy05g014190
SyntenyLcy05g014190
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAATTGAAATGCAGGCCAAATTCAAATTCGGGTGAAATGCAAATTCTTATTAAATTCACGCGTAAGCGTCATGAAAATCGGTGTACAAGTAGTCGTCGTCATCGTCATCGTCGTCGTGAGTGAGAGAGAAAGTGCCGAAGGGATTTTTAGAGAGAGAAATCGCCGGCGTCCTCGTGATTCCCGCCGGCGGATTGCTTTAAAAGGCTCGCCGCTGATTCTGGACGGAAATGCTTCTCTCAGTGGCGGAGAATTAAGGTTTTTTTTTTTTTTTTTTTCATTTCTTCAGGCTCTGCCGCCGTCGGAGGAGGAAGGTGGCTAACTTGCCGTCGAGGACATTGTCGAGCTTCCGGCCGGCTTGGAGTGATTACTTCCTATGAGGTATTTCTGGCAGCTGCGGAATGTCTATTGTTGTCAATTGACGACAGTCATTGCTTTACTTTTGAATGTTCTGTAGCGCTTTTATGTTGTTTCAGTGATTGTTTAGGTTTGGTCTGTGAGGTTTTATTTGCTTTTATCTGTTGCAGATTGTGAGGGTGATTGTTTGTGTCTATGATTGGGAGTTTGGAACTCAATTGGGATTGAACTGTGGTGGAGTTGCGTAG

mRNA sequence

ATGAAATTGAAATGCAGGCCAAATTCAAATTCGGGTGAAATGCAAATTCTTATTAAATTCACGCGTAAGCGTCATGAAAATCGGTGTACAAGTAGTCGTCGTCATCGTCATCGTCGTCGCTCTGCCGCCGTCGGAGGAGGAAGGTGGCTAACTTGCCGTCGAGGACATTGTCGAGCTTCCGGCCGGCTTGGAGTGATTACTTCCTATGAGATTGTGAGGGTGATTGTTTGTGTCTATGATTGGGAGTTTGGAACTCAATTGGGATTGAACTGTGGTGGAGTTGCGTAG

Coding sequence (CDS)

ATGAAATTGAAATGCAGGCCAAATTCAAATTCGGGTGAAATGCAAATTCTTATTAAATTCACGCGTAAGCGTCATGAAAATCGGTGTACAAGTAGTCGTCGTCATCGTCATCGTCGTCGCTCTGCCGCCGTCGGAGGAGGAAGGTGGCTAACTTGCCGTCGAGGACATTGTCGAGCTTCCGGCCGGCTTGGAGTGATTACTTCCTATGAGATTGTGAGGGTGATTGTTTGTGTCTATGATTGGGAGTTTGGAACTCAATTGGGATTGAACTGTGGTGGAGTTGCGTAG

Protein sequence

MKLKCRPNSNSGEMQILIKFTRKRHENRCTSSRRHRHRRRSAAVGGGRWLTCRRGHCRASGRLGVITSYEIVRVIVCVYDWEFGTQLGLNCGGVA
Homology
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BLAST of Lcy05g014190 vs. NCBI nr
Match: KAG6572075.1 (hypothetical protein SDJN03_28803, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 73.9 bits (180), Expect = 8.1e-10
Identity = 35/47 (74.47%), Postives = 39/47 (82.98%), Query Frame = 0 

Query: 41  SAAVGGGRWLTCRRGHCRASGRLGVITSYEIVRVIVCVYDWEFGTQL 88
           SA VGGGR  T +RGHCRASGRLGVIT +E++R I  VYDWEFGTQL
Sbjct: 68  SAGVGGGRSGTLQRGHCRASGRLGVITFFEVLRAIGRVYDWEFGTQL 114

The following BLAST results are available for this feature:
BLAST of Lcy05g014190 vs.
Match NameE-valueIdentityDescription
BLAST of Lcy05g014190 vs.
Match NameE-valueIdentityDescription
BLAST of Lcy05g014190 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6572075.18.1e-1074.47hypothetical protein SDJN03_28803, partial [Cucurbita argyrosperma subsp. sorori... [more]
BLAST of Lcy05g014190 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lcy05g014190.1Lcy05g014190.1mRNA