Lcy05g014120 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy05g014120
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	Unknown protein
Location	Chr05: 17280769 .. 17285969 (+)
RNA-Seq Expression	Lcy05g014120
Synteny	Lcy05g014120

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

CGGGATTTAAATACACCCTAGGGCGCACGGAGTGTTACATAAATTATGATATTAATTTCAAATTTAGGAGATATGGATATAGATTCTTTCAATCTCTTTCCAGTGAGATCTGGAACTTGAATTGGAACAGCCACGGGAAGATCTAGGAATGGGTTTGAACTCGACGGACGAGGTTTGAATCACGACGGGATCTGGGTCTTCGATTCTAAAGCTTTTCTGGCGAGATATGGGCGTGCGTGGGGAGTTGACGTTCAGTCCTCGATTTTCGACGAGAGGGACGATGAGAGAGATGGAGAAAGGGAAGATTTTCGACAAGAGGGACAACGAGATCTCCAGCGTGCGTGGCGAGATCGGGGCGTGTGTGGGGAGCTTTCCAGCGAGACAGACGGTGAGAGAGAAAGAGATGGTGAGAGAGAAATAAAGAAAAAGAAAGAAAGAGAGGGGCAGTGAGGGAAAGAAAGAAAGGGACGATGAGAGAGAAAGAGATGGTGAAGGAGAGAGAATGAAGGAAGAAGAAAGATAAAGGAAGAAAAAAAGTCGCCGACTGATAACTCTCCAAAAGGGAGTTATTTAGGCCTTATTTGTATAGTGTTTTGTGTGTCATCTGTGTGAAATAGGGTTGCTTTTAGATGAATATTATATGTTTGAACCCATTTAGAAGAATGGATACTTTGGAAGTTATTTTGTGCAGAAAATAATGTTGAGCGACTTGAGGGAGCAAAATCCGTGATCCAGCAAAGCAGGGATCAAAACTGCCACGTGAGCCGCACATGATTCATTAAATGAGGTGGCGTTAGCTGAATTAATCTCGGATCGAGGAAGCTTGGAGAGCCCTCCACGTGTAAAATTTGACCTAATTAGGGTTGACTCCACTTTATAAAAGGAAGTAGCCGTCTCAAGTCCAAAACATTCCAATTTGGAGAAAGAAATTGATGGCAAATGATAGGGCCAGAGACATTCGAGCGTATGTTTTCCGATGTTTGATGAGTTAAATCCAGGAATTGCGCGTCCTCTAATTGAGGCAGCAAATTTTGAAATGAAACCGGTAATGTTTTAGATGTTGCAAACCGTGGGTCAATTCCATGGTTTGTCATCTGAAGACCCCCATTTACATCTTAAGTCTTTTCTAGGAGTTAGTGATTCGTTTGTAATTCAAGGAGTGTCTAGAGATGCCCTTAGATTAACTTTGTTCCTGTATTCTCTTAGAGATGGAGCAAAGGCATGGTTAAATTCTAGGATCAATTAGGACATGGAATGAGTTAGTGGAAAAATTTCTTCGTAAGTATTTTTCACCAACTAGGAATGCCAAGTTGAGGAGTGACATAGTGGGATTTAGGCAGCTCGAAGATGAAACTTTTAGTGAGGCTTGGGAGAGGTTTAAAGAGCTTTTGCGAAAGTGTCCCCACCATGGTTTACCTCATTGTATCCAAATGGAAACATTTTACAACGGGTTAAACATGGCAACCCAAAGTATGGTCGATGCCTCTGCGGGAGGGGCCCTTTTGGCAAAAACCTTAAATGAAGCCCACGAAATTTTAGAAAGAATATCAACCAATAGTTGTCAGTGGTCGGATGTTAGAGGCTCAAATAAAAAAGTTAAGAGTGTGTTAGAAGTTGATGGTGTGTCTACCATTAGGGCTGATATTGCAATGTTAGCTAACGCTCTTAAAAATGTGACAGTGGTTAGTAATCAGCAACCGCCAGTTGTGGAGCCTGCTGCAGTGGTGAACCAAGTTATAGAAGAATCATGTGTCTATTGTGGTGAAGGGCACAACTACGAGTTTTGCCCCAACAATCCAGCTTCTGTGTTTTTTGTAGGTAATCAAAGGAATAACCCTTATTCTAACTTTTATAATCCAGGTTGGCGCAACCACCCCAACTTTGCATAGGGAGGGCAAGGAAGTAATTCACAAGCCCCTTTTAAAGTAATCAAGCTTCAATGAGAGCCAGTCAGGATTTGCTAAATCGCAGGCATTGCCCCAGCAAAATAAGCAAGCGTTGCCCCAACAAAATTCAGAGAGTTTTCTTGAGGCAATGATGAAAGAATATATGGCTCGTACAGATGCCACAATTCAAAGTAATCAAGCTTCAATGAGAGTCCTGGAATTGCAAATGGGTCAGCTAGCTAATGAGCTGAAGGCAAGACCTCAAGGGAAACTTCATGTGGATACTGAACACCCTAGAAGGGAAGGTAAGAAGTAGGTATAGGCAGTGACTCTTAGGAGTGGTAAGCCACTAGAAGAGAGAAAAGAGCCTAGTAAACCCCAGGATGTAGAGAAGAATAGTGATAAAAATGTTGTTGTTGAGAAAGAGTTGGAGTTTGGTAAGAGTGATGGAGGCAACAATAATAATGTTGGAGCTTCTGGTTCTGTTCAAGATGGAACCACCTTATGTACCGCCCCCACCTTATGTACCACCTCTACCTTTTCCACAAAGGCAGAAGCCTAAGAATCAGGATGGTCAATTTAAGAATTTTTTAGAGATTCTTAATCAATTGCATATAAATATTCCTTTAGTAGAAGCTATAGAGCAAATGCCAAATTTTGCTAAATTTCTTAAGGCTCTATAGATGGTGGCCCACGAGGGAGTTAAGTGGCAAGAGTCCAGAACTGGAGTCAGGACTCTACTATTACGAGATTTGAAGCCAGAAACAGTTGTGTGGCTATATGTGATCAAGAATAGAATAATGCCAACAACACATGACACCACCATATCTCAAAAGCGTGTCATGTTATTATACAACATGCACAAGGGGCTGGATCTAAACCTTGGACGGATTATTTGGATGAAGATCCTCTCTTGTGGACATAAGAATGTGGGAAGGTTGTTCTTCCCAACCTTGATCAAAAAATTGTGTAGGCTTGTAGGGATAGAGCTAGAAGAAAAAGAAGAAAAAGAAGAAAAAGAGGTAGCCAGAACTTCAATTGACTAGCTTAATCAAGAAGCTCACAACAAACTCAAGGCAAAAGGTTACTTCTCCTGAAAAGAAGGCTCAAGCAATCTCTCATGTAGCTCAATCATCAAAGTCTCCTGAAGAAGCCACTGCTGTAGCAGGCGATGCGACCACAAAACCATCGCAGAATTTACCAGATGTGGTCGCAAGTCAGCAGCAACCTCCAACGCCTCAACCACAACCTGAAAATAATTTGGTGGTTTTGAAGAGCCAATTTAAGGATTACCTGACCTATGCTAGAGAGCGAGATGGAGTTGTCAGGTGCATCTTGGAGAATGTGGTGGGGATCTTGATGACTATCTTCCACCATTCCCCGAAATAAACTGGAATCCAACACCAGGCGATGTAGCAGGCCCTTCTAACGCCTAGTGGAGTTTTCCTTTCACCCTTCTATTCTTTGATTCATTAATCTTTTTAGGTGATTGGAAGTAAGGTCTAGTTATATTTAATTGCTTTTTGTTATTTCTTTTGTTTTGTTTCCTTTTGTGGTTTTGTTGTTTTCTTTTTTTTTTTTTTTTTAATAAGGTAGTAAGTTTCTTCTATTTTCTTTGCATTTTGCATTCTTAGATAGGTTGTTTCTTTTTTTTTTTTTAATTTTTGGATAAAGTTTTGAAAAAAAAGTAAAATTGAAATCAACAATTGAAAAAAAATACCCTTATTGAAAAACAATTCTTCTTTTTTCCTCCTCTCACGGTAAATTCTAACGGTTTCCATCCAAAAATTAACAGACAAAGGTATTTTTGAAACATTTTTCAAAGTTCAGGGGTATTTTTGAAACTTTTCAATGTTTAAGGGCATTTTTGAAACAAACTCCATAGTTCAGGGATATTTTTTATAATTTAGCCTTTTTTAAATTCGAAATTTTAGAGAATAAGAAACAAATTAAACATATTTTTGTTAATTTATTAATAAAAATACAAGACATAAAAAGCCAGTATCAAGCACATTTTTGCTTTCTTCTTAAACAAAAGGAGCATTGAAAAAAAAACAAGAGAAAAAAAAAGGAACAGAAATGCTATCAATATATCATTCTTGTCTCAATTCTGTATCAAATCCAAAACAAAATAATTAATGTAAGAAGTATTGTTTGTCAGATTTGTTGAAAGCAGTACCTCAAGAACACAAGAAGTTTCTTTCCAATCTGGTTTGGGTTCATGAAGAGGCAAGAACCGTTGGCACCTAATTAGTGGGGTCAAATCTCGCCTATAGTACCTCAGGTTCCTCTAGTTGTACATCAATTTTCTCTAAGGGTAATTGTCATGAACATGGTTCTTTTAATATCATGAAACATACATATGCACATCACATTCATAGAAATTCATGCAAGTTCTATCCTATCAAGACACAATTTCCCAACCTAGCCTGCATTCCAGTAGTAAGGCCACTTACCTTGACATAAATGATATTGACTTAACCTCTTCAAAATTCCTTAAATTCCAAGACCTTATTCAAGCTTCAAGATAAAAGGAAAATTATTTAACACCAAAAGGAACTTTAAATTAACAGTTCTACAAGGAGCCAATCGACTTTAGGGAGGATTTAGCACCCAAAACTTACCCAATTTAAATCTTTAGCTTGCTAGTTGGGGACCCAGTTTTGCTCCAAAATTGATGATTTAAACTTCAATTCCAATGGGTGCCTACATTCAGGGACCAATTATTCATGGGCATAACACTATGAGCCAAAATTTGTCCAAAATTCATGAAAGACTTGCTGCCTAACACCTACCCAAAGACGAAATCTTTCAAAGTCGCAGAAACTCGAAGACCCACTACTTGAATCCCCAAAAATTGAAGGAAAAGCTTGTTTTACGAAACCAAAACTGAATGAGTATTCCATTTAATTGCTCAAACAACAATTAATACCATAATCCAACTTACCCGAAGGCCGAATCTACTTAAAGATGTCGGAGATCGAAGCTTAAAGTCGCTGAAAACGCGAAGAAACATTGTTGAATCTCACTGTCAAAGGCCCCCATCGTCGCTGTTGTCCGCGATAGAGAAAAACAGAGAGATCTGAGGGTGAGAGAGGGAGAAAACACGAGATAAAGAGAGAGGGAGAGAGAGACAAACCGAGACGAAAGGAAACCCACTTGCCGGAATCTGCTATCGACGCTTTACCTGCGCGAAGACGCTGCAGATTCATCTCTGTGGCCTGCATCTGGTGCTGCAGGAAACGCCGAGGGTCGGACGGAGCTGGGAGATCGAATGGCGGCGACGATAACGTGAAGGAGAGAGATAAAATGTAG

mRNA sequence

CGGGATTTAAATACACCCTAGGGCGCACGGAGTGTTACATAAATTATGATATTAATTTCAAATTTAGGAGATATGGATATAGATTCTTTCAATCTCTTTCCAGTGAGATCTGGAACTTGAATTGGAACAGCCACGGGAAGATCTAGGAATGGGTTTGAACTCGACGGACGAGGTTTGAATCACGACGGGATCTGGGTCTTCGATTCTAAAGCTTTTCTGGCGAGATATGGGCGTGCGTGGGGAGTTGACGTTCAGTCCTCGATTTTCGACGAGAGGGACGATGAGAGAGATGGAGAAAGGGAAGATTTTCGACAAGAGGGACAACGAGATCTCCAGCGTGCGTGGCGAGATCGGGGCGTGTGTGGGGAGCTTTCCAGCGAGACAGACGGTGAGAGAGAAAGAGATGGTTACTTCTCCTGAAAAGAAGGCTCAAGCAATCTCTCATGTAGCTCAATCATCAAAGTCTCCTGAAGAAGCCACTGCTGTAGCAGGCGATGCGACCACAAAACCATCGCAGAATTTACCAGATGTGGTCGCAAGTCAGCAGCAACCTCCAACGCCTCAACCACAACCTGAAAATAATTTGGTGGTTTTGAAGAGCCAATTTAAGGATTACCTGACCTATGCTAGAGAGCGAGATGGAGTTGTCAGGAAACGCCGAGGGTCGGACGGAGCTGGGAGATCGAATGGCGGCGACGATAACGTGAAGGAGAGAGATAAAATGTAG

Coding sequence (CDS)

ATGGGCGTGCGTGGGGAGTTGACGTTCAGTCCTCGATTTTCGACGAGAGGGACGATGAGAGAGATGGAGAAAGGGAAGATTTTCGACAAGAGGGACAACGAGATCTCCAGCGTGCGTGGCGAGATCGGGGCGTGTGTGGGGAGCTTTCCAGCGAGACAGACGGTGAGAGAGAAAGAGATGGTTACTTCTCCTGAAAAGAAGGCTCAAGCAATCTCTCATGTAGCTCAATCATCAAAGTCTCCTGAAGAAGCCACTGCTGTAGCAGGCGATGCGACCACAAAACCATCGCAGAATTTACCAGATGTGGTCGCAAGTCAGCAGCAACCTCCAACGCCTCAACCACAACCTGAAAATAATTTGGTGGTTTTGAAGAGCCAATTTAAGGATTACCTGACCTATGCTAGAGAGCGAGATGGAGTTGTCAGGAAACGCCGAGGGTCGGACGGAGCTGGGAGATCGAATGGCGGCGACGATAACGTGAAGGAGAGAGATAAAATGTAG

Protein sequence

MGVRGELTFSPRFSTRGTMREMEKGKIFDKRDNEISSVRGEIGACVGSFPARQTVREKEMVTSPEKKAQAISHVAQSSKSPEEATAVAGDATTKPSQNLPDVVASQQQPPTPQPQPENNLVVLKSQFKDYLTYARERDGVVRKRRGSDGAGRSNGGDDNVKERDKM

Homology

The following BLAST results are available for this feature:

BLAST of Lcy05g014120 vs.


Match Name	E-value	Identity	Description

BLAST of Lcy05g014120 vs.


Match Name	E-value	Identity	Description

BLAST of Lcy05g014120 vs.


Match Name	E-value	Identity	Description

BLAST of Lcy05g014120 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..34
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 69..83
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 17..34
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 90..106
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 55..120
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 134..166

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy05g014120.1	Lcy05g014120.1	mRNA