Lcy05g014040 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy05g014040
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	CRM domain-containing protein
Location	Chr05: 17079733 .. 17090094 (+)
RNA-Seq Expression	Lcy05g014040
Synteny	Lcy05g014040

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAAAATCTTTGTTTTGTAATCTTCGTAGAGCTTCTCTGCTTCTCAGATCTTCATTTCTGAACCAATCGTCTTTTAGGTACTATTCAACTGAAATTCTTCCATTTTCTTTACTAGAATCTCGCTGTTTCTTACTTTTAAATAGCCATTTTCATTCCCTTTTACTTTGAGTGTCCAAGTTAGTGATGAAACTTCTTTGTTGATTTGTGCCCTCTTCTTTTGATGATTCTAGTCAGGTTTGAGATGGGAAGAAAATGGCTTGTGTTTGGCTTTGAAAGATAGAAATAGTGTAGAGTCTTTAACATGTATTAGTGTTGATGAATTTGCTGGTTGAAATTTACGGTGTTCCCACCATATATTCTGTTGCAGACCTATTCTTGGGGTCCCTGACACCACATTCTCTCAATTCAAACACTTTTCTCTACCCAGCATCTCAAAACCTTTGTTGGGATTTAGAAACTTAAGCCATGGTTCCGTGAATCTTATCATATCCCAAGGGAAACCAAAGTTTGAAACAAATGATGTGGATCCTCCAAAAAAGGATAAGTGGAAGACTAAAAAAAAGTTGAAGATGCAGCGAATGAGAGAGAAGCAGAAAAGAAAAGCAGCAAATAAGAAAGACCCTCGTCAACTGCGTTAAGGGGAAAAAAAAGCAAAGATTTTCAAATGTCGAAGAGAGAATCAAGCACAAACTGGAAAAAGTGAGCCAAAAAGAACCATTTCAGATTTTAATGGGTCTATATTGTCAATGTTTAGCTTATTTTATGGTATCACCAATGTATTAGCATACTTTGCTCATTTCAAAAGAAAAAGAATTATTTCATACGCATTTCTTTTATTCTACTGTTGAACTGCAGCCAGATAATTTTCAACTTAAAGGATGTTGGCAACTTTTCATATGTTTTTCATTAACAGTTATAGAGATATTGTTACATGCCAGGATTAAGGAGGCATTGCTAATGGAGAGATTAAAGCGATATGAAGTTTCTAGAGTTCAAGGTCCTATGGTGAAACCACACAATCTGACTGCTGAGGAACGGTTTTATATGAAGAAAATGGGTCAAAAGAGGTCTAATTATGTACCGATTGGAAGAAGAGGAATTTTTGGAGGTGTGATTCTAAACATGCACATGCATTGGAAGAAACACGAAACAGTTAAAGTTTTTTGCAAGCCTTGTAAACCTGGCCAAGTGCATGAGTATGCACAAGAAATCGCAAGACTGAGTGGAGGAATCCCGATACAAATAATCGGTGATGATACTATCATCTTTTATCGAGGAAAGGATTATGTGCAACCAGAAGTTATGTCACCAATTGATACATTGTCTAAGAAACGGGTACGTTTTACTATTTTCGGCGTTCATAACATATTTAGAGAATTGTTAAGCATGCCTTTTTTTTAAAAAAAAAAAATCTGTGAGTGGCCCACTCTGAACCAGTGCATCTTTATCTTTTAGCATACATAATAGTAAGGGGGGATATCAGTCAGACTTTTTAGCTTTTCGGGTGTAAAATAGTGCATGGGAGTGAGCTGTGTAGGAAGTAACAGTATTGAAGTTAGAGAAGTGTGAAGCTCACCTACTTTTTTAAGAAGAGAAACATAATTTCATTGATTAATTAAATATAGGAGAAATAACTCTAAACGGTGAATTACAAGAAAGTTTTCCAATTAGAAATCAAGTAAAAAAGACTACAATCAACAAAAGGGTGTTTACATTTACACCAATACAAAGCATGAAAAGAAATCAAATCCATACACATACAAAGCAATCAAATCCATGAAATTATCAAAGGTTGAGAAAGCATCCTTGAAGTGTGAAGCTCACCTATGCTAATCCTTTTGGTTTTTCGATTGTTGGGGTGTCAATACTAGGGAGGGACGATCTTAGCCCCTTGGAGATTGGGAGGTTTCGTGAGTTTGTATCGTAAAAATACTAATTAGCAAGGTAGTTTGTCTGAAGCTATTTCTGGACTTAAGATCAATAGAGGCAAAAACTTCATTATTGGTATGAATTGTTGCCCTTCTAAGCTTCGTTCTTGGGCCTTATTGGTTGGATGTGAGGTGGATCGACTTTCTTCCTCTTATCTTGGGCTTCCGCTAGGAGGAAATTTGAGGAGCAAAGTGTTTTGGCATCTGGTTTTGGATAAGGTTAAGAGATATTTGTCCACTTGGAGGAAGGCTTTTTTCCAAAAAAGAGGTAGACTTTTATACAATCGGTGTTTGGTAGATTTTCTCATTACTTTTTATCTCTCTTCAGGATGCCAGTTTCTATGAGTAAGATTATGGTGCGAGTGATTAGGAATTTCTTGTTTGTGTGTGGGGGGGGGGGGGGGGTCCCATTTGGTTAAGTGGGAGCTGGTGGTTAAGTCAGTGGTCTAGGGTCTAGGGATAGGAAGCTTGAGTTTACGTAATGAGGCCTTGCAAGCTAAATGGTTGTGACATTTTTGATGGAGTCTAATGCTTTGTGGCACAATGTTATTGTGACTTGTGAGTTGATATGATCCACATTCCATATCCACATCCTTTTGGGTGAGTTACTATTGGTGGTACCAAAGGGCCTTACATATATAGACCCAAACTTTCATTGAGAAAAAAAGAAAGAATTCAAGTTCTTCCTCCGCCTTTCAACAAAGAATACAGGAAAAAGGACCAAACAAAGGAGTCTCGAGAGTTGGTCGAAAGTGTTAACCCTTCCGAGGATTACTTGCCACACAAAGAACTTAACTTTCTTTGGGACTTTCACCTTCCACCTAAAAAACACAGATACGGACACAATGACACATCATCTTTTTAAAATCTAGGACACGGACATGACATGAACACGTTTAGTAAAATATGCATTTTTAAAAATATATATTATTTTTATATAAGAAAGAAATTTAAAATCAAGTTCATGCATTTGTATGCTTAAAAAATGAGGTTAATTTGTTTTTACTATTAAAAATTATTATTTTTGTCATTTGGTATTGTATCTATTTAGTATACTTAACGAGTGTTTGATATGAACCTATATTGATTTTGTACAACTAGTGTTTGCCACATATCAATTGTGCTAACAAGTGCTAGATATGTGTCCAACAAGTGTCGGACACGGACACGCTAGCTAAACTATAGTGTTCATGCTTCTTAGCCCTCCACAAACATGAAAAAACAAACTCACTAACCAAAGAGAGATTTGACAAGAATTGAAAGAATAAACTACACAAAGCCCCAATAGGTATTAGGAATCCAAAAATGAACATCGCTCCTCTCCCGACAATGAAAGTTGAAGAGCCAATAGGTATTAAAAGAGCCAAGATGTTTGTTATTTCTCTACCAAATAACGAACAATGAAAGTTGAAGAAAAAAGAAGGGGAGTTTCTTGAAGAGTCAAAGACATCAGTCGCAGTGTGATTCTTCATGAAATATGAATGATTTAATTGCGGGAACAAAGAGTAGAGGGAACAAACCCCCACCCATAAGTCTTAAAAGTAAATGTTCCTCACATCACCCATAATGCAATGGACCAAGGTAGAGAAAGAAGGAAGCTCCAAGGAAACTAAACTTCTAAACACATACAAGTTAATAATTAAACGTAAGACACAATATCAACATACAACCAAACACATAAATCCAATAAGTTTCATAATGATTTTATAACATTAGAGAAATCATCCATACCTAGTTAGAAGGGTCCCTTTTGTGTGCTTTCCATTGTACGATCAAAATAAGTCTACCTATGAAAATGGACAAATTAAGAGAAAGAGGTTACTTATGAGAGATAATACAACAAATTAAGAAATTAATTAAGAGGGTACTATACAAAAAAAAAAAAAGTTAATGGTGTGGTATCTAGTAAGGAAGATTAATCTTGCTCTACCAACTTTTTAATAAGAATAGAACCCACTTGCTCTACCAAATACATTCAAATTCTAAATTACCAACCATATTTCCTCTGAAACCATCCCGACTAAACAAATAAAATATAATTCAAACCAACAGAAATCATCCAAACAACGCATATTTTTTAGAGAATTCGAAGATCAAAATTTTAAGAAGATCCAAATAATTCCAAAATATTGTCGTAATGCTAGCTTTACTATACAAATGGTGAAGACAAAGGGAACACAGAAAAATGGTGAAGACAAGGCACTGAAACTGCAATTCTATACAAATGCATACCTCCCCTCTTTTGCAAGTTTAAAATAAACCAAAATGGGAGGTACCAACACCACTTTACCATTAAAAATTTGGAAAGGCACCACAAAAAGCAACCAGAAGAGAGTCCATATTCAGTAGGTCATATTCTTTGAGGGCTCTCACAAGAAGTTGAAAAGCAAAATCAAACCATGATCAAGAAAAGCTTGGGAGAAAACAAACTTGCAATACTAATTATAACATACATGAAGCAATTATCAAACAAGACACCAAAAGAAATGCATCATAAATTAAAACCGAACAAAACCCCTCCAAGTCCATGTCCCAACTAAGCGTAGTAAGTTGATATTTCACAATCCAGAAGCGTATATAACTATATATTATACAAAATAAAGGGAACAACACGATTTCCCTAATGTCTACAACTATTGTCAGAAACCCCCATATCAAACTACACATAATTGAGCATGAACTCGTTGTAAGAACCCAAAACAGAAACAAGTGCAATTAAATATGGAAGAAATTTTGGAAAAAACTGAAGTCTAATATTTAGACGAGTTCCAACTGAAAATAAATATTGACTAATGAGTATGGATGTAAAAGAGTTCCTAGACTACACTTGGACAATAACGTCACGACTTATTTATACTCTTGAGGTTGTATATCTGTCATGTAGAAGTTAATCTACCATAAAGAAAGCAATCCTAGTTAATCATGTGAACTCTCAAGTGAAGAACCAAAGCATAAATCAGGAATGCTAAACTGCATCCATGCTAATGTGGTAGATACATGTCACATGCATGTACCAACAAGCTTATCTATTACATCTCTGACACCCTGTGTAAATGCCAACTGATCTAAAGATATGGATATTGATTGAGCGAGCATGGCATTTTTGCTGCATTATGAAGTTGGACAAAAGCCTCTGTATTTGTATCCCTTCAACCTCCGGTTTTCTTATTTTGGGCACTTTTCCATCAACAAAAAGTTTGGGGCACTAGAGCATGCTAGGATTTCTTTTCTGTTAATAATCATGAATGAATATGTGCCAGTGATCTATCTTGTGACTCTTGTCAAATTCATTTGACTTCCAAAATCTATTGAACTAATGTGCTATTGTACAATCCACTTCTGCAATGGTAGTTTTGCTTGTGCTGCTAACTTAATAAGCCTCACATTTATTTTACTGGTGCCGGTTGCCATTGCTACTTCTACCCATGCCTGTTCTCTGCAATAACTCTAAGGGCCCGTTTGGTAACGTTCTCGTTTCTTGTTTCCGTTTCTTCATTTTTAATAAAGAAAAATAGAATTTCATGACCCTAACACCTATACATTCAATAATAATAAACCTATATTCTTATTTATGTTTGGAAACAATTGGAAACAAGAACAAAAATGGAGAAACTAGTTTTAGTTGTTCCCAAAAGTTCTATACAAATTTTGGGAGTGTTTCTAAAAAATGAGAAACAAGAAACATACATAGTTATTAAATGCTTAGATTTCTTAATAAAATTGGAAACAAGAAACAAGAAACGAGAACGTTACCAAACGAGCCCTAAGTAACTTGATCTCAGCTTATTGTTACTGAACTTTGTTCAATGAACACACACACACATACTTATTTAGTATTTCATGATTTTGTTCATTGTTTTTGTGGTTTATGAACAATAAGTTTATGGTCAATCGGCAATGCTAATTTCATGACATAAGAAACTATGCTTGATATAGGTGAATGCTGCATGTGAATTAGAGATAATGTCAATATTAGAAGAATCTGTTTGTAGTTAGTTTCTTGATACACAGATATATTACTATGTCAGCTTTTTCACTCGTAGGTTTTTTGGTGTATTGTAGTAAAACTGTAAAAGCTTCAAACATTTTGGCATTCCATTATGAATATGAATATGTTGTCCTATTTATTTCTTCAGGTGCTGAACTGGGTTGGGTGGGAGAAGAAGTTGTATGAGTTCTACCGGAGACTTTCAACCAAGCAAGAAGGTATAATTTTCAGGATGCTCTAGTTCTAGAGTTGAATAATCCCTTTAACTTATATGTATTGAGCAACTCACTATTTATTTCTCTTATCTAAATTTTCCACTTAAATATGTCTCTTTTTACTAGAGGCTTCTACAGTATTAAGAGTTTATCTAAGGCTTGTTTTACTAGTCTCTGTTTGCCTTCACTCTTCAGCATGCCTTAATGCTTTGCTATTCTTACTTGCACAAGGTTTGTTAGTTCAGCTATTTGATTTTCCAACATCAAGGGCTATTATTTTGTTTCTTTTCTTTTTCCTTCTTCCTTTTCTTTTTCTAAAAAGTTTTAATTGTGGCTAGAGCCCTTTCAGTTTCAGTAATCTCTATAAAGATCAAGTTTTACTTGGACTTTCAATATCCAGTGCAAGTTCTTTTTTGTCCCGTATAGTTCTTTCTTGTCAAATAAATGAAAGTTCTGGAAAAGCTTTCATTAAATGTCATTGTTGTGACTGTTTTCTTTTGGGTTCCTGATCAACATCGCTCCATGTTTTCCTTCATGATATAGATACTAGCTTATTTAATTTATTTCAAATGCACTAGGTGATGATCCATATGGAAGATGAACAGGATGGCGAGCTACAAATTCTGTCTGGTCTCTTTACTGGCATAAATTTTAGTGTCTCAACTCAGCAAGATACAGTAAGCATTTTAATGGTGATATAACAACATCATATACTGCTTTAGCAATTCAATACTTTCAAGAACAATCTCGTTATGTGATGTTTATAGTTTATCAGTGTAGGGCCAGGGTTTGTTTTTGTTTGTAATGGGTTATTGGCATTGTTTTGCCCAGTAGAGTTTTTGGGTTTTGGATTATCTGGATATATATGTTATCAATTCTCCATTTTTTTTCTTTCAAAGGAACAAACAACCTACGAGAACTTCATATACCACACAATAATTGAAGGACCAAGGCTAGTATACTCTATAACAGAACAAAAACAAATTCAAACAAGCATACCATCACAGATATAAGCTTGGGTTTGTTCTCTTGTATTGCTAAGCTTATAAAAAGCATCTGAAGCCTTGTCTGCTAGGGCTCAGTATTGAATAGAAGCCACGACAGTGACAAAAACATTATCCTGTGAAAAATCCAGCCAATAATTAACATTGTAAACTAATAAACATTAATACTCTTCAGCTCTAGCTCAAGAAGCTTCATATTTCCTCTTCGTGAATAAACCTTTGTTTAGAGAACCGTAGAAAAGAATAGTAAACTAATAAACATTAATAGGAAGTGCCTGCAGATAGCAAATGCCACGACAGTAAAAAGCTATACCAAAAATTCAAATGTAGGAATTTTTAACACTAGAACGAATACAGTGGGTTATCTTAACTAAAAGAAAATTTTCACCCTAACTTCAATCCAACGCGCAAACGAACCAAAAACTCACCCAAAAACACACTTACTTGAACTGATTCGAGGAAAAGAACTTCTGACCGACGAGGAACCACTGACGAGACTAAGTTGTGACTGTAGCTGGGATTGACGCCGCGACCTGGTTCTCCTCTAGACTGACGGCGACGGTAGCTAGCGATGCTGAAGCGCGAGAAAGAGAAGGAGATGGTTGAGTCTGCGACGGTTCTTTACGCAAGAGAAAAAGAGAGCGACGACTAGCTGCGGCGGCGCTGGAGCGAGAGACGGCTGAAAGTTTCGATTGAGTGAGGGAAAGAGAGAGGGATATTGCCGGAAGCAGCGTGGAGGCGCTGGAGCGTGGAAGCGGCGCTGGAGCACTGAGCACGAGAGCGAGGGAACGAGGGAAAGAGAGAGAAGGCGAGAGGAAGGCAAAAAAAAATCACGATAAAATTTGGAAGTTTTATTTTTTTTCTTTTTTTTTTTTTCTTTAATAGTGGATTTAGGGTTTGCCCAATTTCACTTATTTCTAATTAATGACACTTAATCAATGTCATATATTTATGACTTAGAAAAAATGTCATAAATTTTTGAAAATACGAAAATGTCCGCTTTTTCCCGCCAAAAACGCGCCCCCAGCCATTTATGACATTTTTTTTTCTCCCTTCCCTTTATTTGGTTTAGTTGTGGTGTCATAGAAAGTCATTTTTGTAGTAGTGTCCATAATTGATTAATCTTTTCCATAAATGATTGATCACTTCCATAAGTGATTAATCATTTCCATAATTGATTATTTTCCAATTAATTAATTCTTTAAATTAATTAATCACTAATTAAATATCATATATTTAATTTCAGACCTTCTATTAGTTAATTAATTAATTATCCAATTAAATATCATATATTTAATTTCAGGCTTTCAATTAATTAATTTTATAATATGAATCAAATTCATATTAAAATTAGAACTCCTTCCAATTCTCTTATATCCTATAAATTTAATATGAATCAAATTCATATTAATATTTGAACTTCTTCAAATATTTATTTCTCTCATAATAATAAAGTTTAATTTCAAATTAGACTTTACATTTTAATGTATCACTATACATTATATTAATTTGTATCTCATACAATTAACTTAATTCTCAATATGAATTTGAACTATATTCAAATTCTCTCAAGATATAATTGTTCCTAATTACTCTTTACGAGCTAGCAGGGGGACCTAATGGACCTACAGATCAGAAGCTCCAATGATATGAGGTTAACCGATTAAACTCATTAATCAGGTTAACCAATATTCATTAACTATGGGTCATTCCACTAAAGACCCACAGCTAAACTCTTCTCACTGTAGAACATTTTTGTGTCCACAAATATAGACCTATACTGGTAAGTCAATCCTTCACGAGTGTTCGTAATCACGGCTGGGTCAAATTACCGTTTTACCCCTATGTTACATATGTCTCCTTAAGTACCAGCGCTCCTCTAATGAACAACCTGTTTATGGTCCAACCATTAAACAGAAAGTCCCTCTCGGGCCAGTGAGAGGGCGGGATCCCTTTGTTCAAGTCCCGAAGTCACCACTTAAGGGAACACTCATCTACTTCTCCTAGAAGTGGGAATAAGTGAATTTCATCTTGTGTTGTCATGTCCCCAGCCCCCCACTCGGTCTCGTCCCCAAGAAGGTAGGCTTATTGAGTCGGCGTGCAGGCCACTCTCACCCATACTAATCAAAGGACAATCCCTCGTGAGAAGGAGTTCATGACACACTCAAGATTAAGACTGAGTTACCTAGGTCATCCTATTGAAACAGTAACCTAACTAGTTAACGGTGTTACATCTAGTGATTTACTATTTTGTGGTCCGGTCTTATGCAAACTCATTGCATAGGATACCTCCGCTCGCATGTCTCCTACATGGACGCCTTGGATCAATACGTTTGTATCGAATACAAAGCAGGTCGTATCACATAATGTTACCAGGATAAGGTACCCAGCCTTATCCCTGTACTATAGACCTTTTAGGTTGTTACTTGAACACCGATCCCTGTATGTCCCCACATACTAGTTCAAGTCACATGTAAACAACCTTGGATCTTAGTTTATTGGATTTGGGTTAAATTGTGCAATATTTAACAATAACACTTTATTGTAGAAACTCAATAACACTTTATTGAAACAAGTATACAATTTGTTTACATTCACTATCTACGAGTTTTAGGGCATAAAACCCAACAATACGGGGGATCATACAGGCGTGGTTTTATGAGCGGCGCAACTACTGGGCATCCCGAACTTCCACGCACTCAGACTATACACTACAACAGATGGCATCCGAGCTGGAAAAGGGGAGAAGGTATTTGGTCGTACCGATAGACTATTATCGACTGAATGTACAGGATGGCTTCCTAGACGGACTCGTCGACCTTAACATGCGTCAATGCACGTGCAGAAAGTTTGATTGCATGGAGTTACCATGTTCACACGCGATGGCAGTCGCATGATATCGTAATGTCCCCGCGTCTAGCCTATGCAGTCGGTTCTACTCCGTCGACTATATAATTGCTGCATATGTGCAGCCAGTCAATTCGGTTGGCCACATCTCACACGCATACTGGGTCCTAAAGATATTCATCTTTGACTGTACGATATTTTCCCTACTGCGACCAGTCACTAGATGTTCTACAAACTGCAAACAGAAAATGCCACAGTCGAGGGAGTTCGTTTGTAACTTCCCAGTGTCCGCGTGGACGACGCGCCATGGTTCTCTAATCAGATCCAGCTTCTGCGTATACACGCCGCATACGTGCAGTAAAGACGACAACGTATGA

mRNA sequence

ATGGCAAAATCTTTGTTTTGTAATCTTCGTAGAGCTTCTCTGCTTCTCAGATCTTCATTTCTGAACCAATCGTCTTTTAGACCTATTCTTGGGGTCCCTGACACCACATTCTCTCAATTCAAACACTTTTCTCTACCCAGCATCTCAAAACCTTTGTTGGGATTTAGAAACTTAAGCCATGGTTCCGTGAATCTTATCATATCCCAAGGGAAACCAAAGTTTGAAACAAATGATGTGGATCCTCCAAAAAAGGATAAGTGGAAGACTAAAAAAAAGTTGAAGATGCAGCGAATGAGAGAGAAGCAGAAAAGAAAAGCAGCAAATAAGAAAGACCCTCGTCAACTGCTTATAGAGATATTGTTACATGCCAGGATTAAGGAGGCATTGCTAATGGAGAGATTAAAGCGATATGAAGTTTCTAGAGTTCAAGGTCCTATGGTGAAACCACACAATCTGACTGCTGAGGAACGGTTTTATATGAAGAAAATGGGTCAAAAGAGGTCTAATTATGTACCGATTGGAAGAAGAGGAATTTTTGGAGGTGTGATTCTAAACATGCACATGCATTGGAAGAAACACGAAACAGTTAAAGTTTTTTGCAAGCCTTGTAAACCTGGCCAAGTGCATGAGTATGCACAAGAAATCGCAAGACTGAGTGGAGGAATCCCGATACAAATAATCGGTGATGATACTATCATCTTTTATCGAGGAAAGGATTATGTGCAACCAGAAGTTATGTCACCAATTGATACATTGTCTAAGAAACGGGTGCTGAACTGGGTTGGGTGGGAGAAGAAGTTGTATGAGTTCTACCGGAGACTTTCAACCAAGCAAGAAGAGGCTTCTACAGTATTAAGAGTTTATCTAAGGCTTGTTTTACTAGTCTCTGTTTGCCTTCACTCTTCAGCATGCCTTAATGCTTTGCTATTCTTACTTGCACAAGATGAACAGGATGGCGAGCTACAAATTCTGTCTGGTCTCTTTACTGGCATAAATTTTAGTGTCTCAACTCAGCAAGATACAGCGTGGTTTTATGAGCGGCGCAACTACTGGGCATCCCGAACTTCCACGCACTCAGACTATACACTACAACAGATGGCATCCGAGCTGGAAAAGGGGAGAAGTCGGTTCTACTCCGTCGACTATATAATTGCTGCATATGTGCAGCCAGTCAATTCGGTTGGCCACATCTCACACGCATACTGGGTCCTAAAGATATTCATCTTTGACTGTACGATATTTTCCCTACTGCGACCAGTCACTAGATGTTCTACAAACTGCAAACAGAAAATGCCACAGTCGAGGGAGTTCGTTTGTAACTTCCCAGTGTCCGCGTGGACGACGCGCCATGGTTCTCTAATCAGATCCAGCTTCTGCGTATACACGCCGCATACGTGCAGTAAAGACGACAACGTATGA

Coding sequence (CDS)

ATGGCAAAATCTTTGTTTTGTAATCTTCGTAGAGCTTCTCTGCTTCTCAGATCTTCATTTCTGAACCAATCGTCTTTTAGACCTATTCTTGGGGTCCCTGACACCACATTCTCTCAATTCAAACACTTTTCTCTACCCAGCATCTCAAAACCTTTGTTGGGATTTAGAAACTTAAGCCATGGTTCCGTGAATCTTATCATATCCCAAGGGAAACCAAAGTTTGAAACAAATGATGTGGATCCTCCAAAAAAGGATAAGTGGAAGACTAAAAAAAAGTTGAAGATGCAGCGAATGAGAGAGAAGCAGAAAAGAAAAGCAGCAAATAAGAAAGACCCTCGTCAACTGCTTATAGAGATATTGTTACATGCCAGGATTAAGGAGGCATTGCTAATGGAGAGATTAAAGCGATATGAAGTTTCTAGAGTTCAAGGTCCTATGGTGAAACCACACAATCTGACTGCTGAGGAACGGTTTTATATGAAGAAAATGGGTCAAAAGAGGTCTAATTATGTACCGATTGGAAGAAGAGGAATTTTTGGAGGTGTGATTCTAAACATGCACATGCATTGGAAGAAACACGAAACAGTTAAAGTTTTTTGCAAGCCTTGTAAACCTGGCCAAGTGCATGAGTATGCACAAGAAATCGCAAGACTGAGTGGAGGAATCCCGATACAAATAATCGGTGATGATACTATCATCTTTTATCGAGGAAAGGATTATGTGCAACCAGAAGTTATGTCACCAATTGATACATTGTCTAAGAAACGGGTGCTGAACTGGGTTGGGTGGGAGAAGAAGTTGTATGAGTTCTACCGGAGACTTTCAACCAAGCAAGAAGAGGCTTCTACAGTATTAAGAGTTTATCTAAGGCTTGTTTTACTAGTCTCTGTTTGCCTTCACTCTTCAGCATGCCTTAATGCTTTGCTATTCTTACTTGCACAAGATGAACAGGATGGCGAGCTACAAATTCTGTCTGGTCTCTTTACTGGCATAAATTTTAGTGTCTCAACTCAGCAAGATACAGCGTGGTTTTATGAGCGGCGCAACTACTGGGCATCCCGAACTTCCACGCACTCAGACTATACACTACAACAGATGGCATCCGAGCTGGAAAAGGGGAGAAGTCGGTTCTACTCCGTCGACTATATAATTGCTGCATATGTGCAGCCAGTCAATTCGGTTGGCCACATCTCACACGCATACTGGGTCCTAAAGATATTCATCTTTGACTGTACGATATTTTCCCTACTGCGACCAGTCACTAGATGTTCTACAAACTGCAAACAGAAAATGCCACAGTCGAGGGAGTTCGTTTGTAACTTCCCAGTGTCCGCGTGGACGACGCGCCATGGTTCTCTAATCAGATCCAGCTTCTGCGTATACACGCCGCATACGTGCAGTAAAGACGACAACGTATGA

Protein sequence

MAKSLFCNLRRASLLLRSSFLNQSSFRPILGVPDTTFSQFKHFSLPSISKPLLGFRNLSHGSVNLIISQGKPKFETNDVDPPKKDKWKTKKKLKMQRMREKQKRKAANKKDPRQLLIEILLHARIKEALLMERLKRYEVSRVQGPMVKPHNLTAEERFYMKKMGQKRSNYVPIGRRGIFGGVILNMHMHWKKHETVKVFCKPCKPGQVHEYAQEIARLSGGIPIQIIGDDTIIFYRGKDYVQPEVMSPIDTLSKKRVLNWVGWEKKLYEFYRRLSTKQEEASTVLRVYLRLVLLVSVCLHSSACLNALLFLLAQDEQDGELQILSGLFTGINFSVSTQQDTAWFYERRNYWASRTSTHSDYTLQQMASELEKGRSRFYSVDYIIAAYVQPVNSVGHISHAYWVLKIFIFDCTIFSLLRPVTRCSTNCKQKMPQSREFVCNFPVSAWTTRHGSLIRSSFCVYTPHTCSKDDNV

Homology

[Close]

BLAST of Lcy05g014040 vs. ExPASy Swiss-Prot
Match: Q67XL4 (Uncharacterized CRM domain-containing protein At3g25440, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At3g25440 PE=2 SV=1)

HSP 1 Score: 141.0 bits (354), Expect = 3.5e-32
Identity = 88/207 (42.51%), Postives = 120/207 (57.97%), Query Frame = 0


Query: 72  PKFETNDVDPPKKDKWKTK-----KKLKMQRMREK------------QKRKAANKKDPRQ 131
           P  ET D D  K +   ++      KLK ++++ K            +K+K   +    +
Sbjct: 80  PARETGDDDISKSENSSSQDGDSCTKLKRKKLKGKRAVVRWLKFFRWKKKKEFERMTSEE 139

Query: 132 LLIEILLHARIKEALLMERLKRYEVSRVQGPMVKPHNLTAEERFYMKKMGQKRSNYVPIG 191
            ++  L  AR KE  LME +K+ E S        P  LT EE FY  KMG K  NYVP+G
Sbjct: 140 KILNKLRKARKKEERLMETMKKLEPSESAETTHDPEILTPEEHFYYLKMGLKCKNYVPVG 199

Query: 192 RRGIFGGVILNMHMHWKKHETVKVFCKPCKPGQVHEYAQEIARLSGGIPIQIIGDDTIIF 251
           RRGI+ GVILNMH+HWKKH+T++V  K   P +V E A E+ARL+GGI + +   +TII 
Sbjct: 200 RRGIYQGVILNMHLHWKKHQTLQVVIKTFTPDEVKEIAVELARLTGGIVLDVHEGNTIIM 259

Query: 252 YRGKDYVQP--EVMSPIDTLSKKRVLN 260
           YRGK+YVQP  E+MSP  TL +K+ L+
Sbjct: 260 YRGKNYVQPPTEIMSPRITLPRKKALD 286

[Close]

BLAST of Lcy05g014040 vs. ExPASy Swiss-Prot
Match: Q9LT57 (CRM-domain containing factor CFM9, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=CFM9 PE=2 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 1.9e-30
Identity = 78/192 (40.62%), Postives = 119/192 (61.98%), Query Frame = 0


Query: 91  KKLKMQRMREKQKRKAANKK--DPRQLLIEILLHARIKEALLMERLKRYEVSRVQGPMVK 150
           +K   + +RE ++ K   KK     + LI  L  A+ K ALL+++LK+Y++  +  P+  
Sbjct: 29  RKESGKTLREIRRAKKLKKKLMTDEERLIYNLKRAKKKVALLLQKLKKYDLPELPSPVHD 88

Query: 151 PHNLTAEERFYMKKMGQKRSNYVPIGRRGIFGGVILNMHMHWKKHETVKVFCKPCKPGQV 210
           P   T+E+    KK+G K  NYVP+G RG+FGGV+ NMHMHWK HETV+V C      ++
Sbjct: 89  PELFTSEQVQAFKKIGFKNKNYVPVGVRGVFGGVVQNMHMHWKFHETVQVCCDNFPKEKI 148

Query: 211 HEYAQEIARLSGGIPIQIIGDDTIIFYRGKDYVQPEVMSPIDTLSKKRVLNWVGWEKKLY 270
            E A  IARLSGG+ I I    TII +RG++Y QP+ + P++TL+K++ L    +E+ L 
Sbjct: 149 KEMASMIARLSGGVVINIHNVKTIIMFRGRNYRQPKNLIPVNTLTKRKALFKARFEQALE 208

Query: 271 EFYRRLSTKQEE 281
              ++L+ K+ E
Sbjct: 209 S--QKLNIKKTE 218

[Close]

BLAST of Lcy05g014040 vs. ExPASy Swiss-Prot
Match: Q2R1U8 (CRM-domain containing factor CFM3, chloroplastic/mitochondrial OS=Oryza sativa subsp. japonica OX=39947 GN=CFM3 PE=3 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 1.4e-17
Identity = 44/113 (38.94%), Postives = 66/113 (58.41%), Query Frame = 0


Query: 149 PHNLTAEERFYMKKMGQKRSNYVPIGRRGIFGGVILNMHMHWKKHETVKVFCKPCKPGQV 208
           P  +T EERF  +K+G +   ++ +GRRG+F G I NMH+HWK  E VK+  K    G V
Sbjct: 589 PETITDEERFMFRKLGLRMKAFLLLGRRGVFDGTIENMHLHWKYRELVKILVKAKSFGDV 648

Query: 209 HEYAQEIARLSGGIPI---QIIGDDTIIFYRGKDYVQPEVMSPIDTLSKKRVL 259
            + A  +   SGGI +   ++     I+ +RGKDY +P  + P + LSK++ L
Sbjct: 649 KKIALSLEAESGGILVSVDKVSKGYAIVVFRGKDYARPSKLRPRNLLSKRKAL 701

[Close]

BLAST of Lcy05g014040 vs. ExPASy Swiss-Prot
Match: F4J2U9 (CRM-domain containing factor CFM3A, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=CFM3A PE=2 SV=1)

HSP 1 Score: 89.0 bits (219), Expect = 1.6e-16
Identity = 43/113 (38.05%), Postives = 67/113 (59.29%), Query Frame = 0


Query: 149 PHNLTAEERFYMKKMGQKRSNYVPIGRRGIFGGVILNMHMHWKKHETVKVFCKPCKPGQV 208
           P ++T EERF  +K+G K   ++ +GRRG+F G + NMH+HWK  E VK+  K      V
Sbjct: 635 PESITDEERFMFRKLGLKMKAFLLLGRRGVFDGTVENMHLHWKYRELVKIIVKAKTFDGV 694

Query: 209 HEYAQEIARLSGGIPI---QIIGDDTIIFYRGKDYVQPEVMSPIDTLSKKRVL 259
            + A  +   SGGI +   ++     II YRG+DY +P ++ P + L+K++ L
Sbjct: 695 KKVALALEAESGGILVSIDKVTKGYAIIVYRGQDYKRPTMLRPKNLLTKRKAL 747

[Close]

BLAST of Lcy05g014040 vs. ExPASy Swiss-Prot
Match: F4JVH1 (CRM-domain containing factor CFM3B, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CFM3B PE=3 SV=1)

HSP 1 Score: 85.9 bits (211), Expect = 1.3e-15
Identity = 41/110 (37.27%), Postives = 63/110 (57.27%), Query Frame = 0


Query: 152 LTAEERFYMKKMGQKRSNYVPIGRRGIFGGVILNMHMHWKKHETVKVFCKPCKPGQVHEY 211
           +T EERF  +K+G K   ++ +GRRG+F G + NMH+HWK  E +K+  K        + 
Sbjct: 665 ITEEERFMFQKLGLKMKAFLLLGRRGVFDGTVENMHLHWKYRELIKILVKAKTLEGAQKV 724

Query: 212 AQEIARLSGGIPI---QIIGDDTIIFYRGKDYVQPEVMSPIDTLSKKRVL 259
           A  +   SGGI +   +I     +I YRGKDY +P  + P + L+K++ L
Sbjct: 725 AMALEAESGGILVSVDKISKGYAVIVYRGKDYKRPTTLRPKNLLTKRKAL 774

[Close]

BLAST of Lcy05g014040 vs. ExPASy TrEMBL
Match: A0A6J1F621 (uncharacterized CRM domain-containing protein At3g25440, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111442450 PE=4 SV=1)

HSP 1 Score: 444.1 bits (1141), Expect = 7.2e-121
Identity = 237/310 (76.45%), Postives = 260/310 (83.87%), Query Frame = 0


Query: 1   MAKSLFCNLRRASLLLRSSFLNQSSFRPILGVPDTTFSQFKHFSLPSISKPLLGFRNLSH 60
           MAKSLF NLRRASLL RSS LNQ  FRP+LGVPD+TFS+ K+F L +ISKPLLGFRNLS+
Sbjct: 1   MAKSLFHNLRRASLLFRSSSLNQPFFRPVLGVPDSTFSRIKNFPLLNISKPLLGFRNLSY 60

Query: 61  GSVNLIISQGKPKFETNDVDPPKKDKWKTKKKLKMQRMREKQKRKAANKKDPRQLLI--- 120
           GSVNL+ISQGKPKFET++VDPPKKDKWKTKKKLKMQR REKQKRKAANKKDPRQL +   
Sbjct: 61  GSVNLVISQGKPKFETHEVDPPKKDKWKTKKKLKMQRKREKQKRKAANKKDPRQLRVKGK 120

Query: 121 ---------EILLH----ARIKEALLMERLKRYEVSRVQGPMVKPHNLTAEERFYMKKMG 180
                    E + H    ARIKEALL+ERLKRYEV RVQGP+V+PHNLTAEERFYMKKMG
Sbjct: 121 KKQKFSNAEERIKHKLEKARIKEALLIERLKRYEVPRVQGPVVEPHNLTAEERFYMKKMG 180

Query: 181 QKRSNYVPIGRRGIFGGVILNMHMHWKKHETVKVFCKPCKPGQVHEYAQEIARLSGGIPI 240
           QKRSNYVPIGRRG+FGGVILNMHMHWKKHETVKVFCKPCKPGQVHEYAQEIARLSGGIPI
Sbjct: 181 QKRSNYVPIGRRGVFGGVILNMHMHWKKHETVKVFCKPCKPGQVHEYAQEIARLSGGIPI 240

Query: 241 QIIGDDTIIFYRGKDYVQPEVMSPIDTLSKKRVLNWVGWEKKLYEFYRRLSTKQEEASTV 295
           QIIGDDTIIFYRGK+YVQPEVMSPIDTLSKKR L    +E+ L    R ++  ++E    
Sbjct: 241 QIIGDDTIIFYRGKEYVQPEVMSPIDTLSKKRALEKSKYEQSLESVRRFIAIAEKE---- 300

[Close]

BLAST of Lcy05g014040 vs. ExPASy TrEMBL
Match: A0A0A0LF61 (CRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G823620 PE=4 SV=1)

HSP 1 Score: 438.0 bits (1125), Expect = 5.2e-119
Identity = 228/294 (77.55%), Postives = 251/294 (85.37%), Query Frame = 0


Query: 1   MAKSLFCNLRRASLLLRSSFLNQSSFRPILGVPDTTFSQFKHFSLPSISKPLLGFRNLSH 60
           MAKSLF NLRRA LL RSS LNQ SFRPIL +PDT FSQ K F   +ISKPLLGFRNLSH
Sbjct: 1   MAKSLFHNLRRAPLLFRSSSLNQLSFRPILEIPDTVFSQIKKFPEANISKPLLGFRNLSH 60

Query: 61  GSVNLIISQGKPKFETNDVDPPKKDKWKTKKKLKMQRMREKQKRKAANKKDPRQLLIEIL 120
           GSVNL++SQGKPKFET++VDPPKK+KWKTKKKLKMQRMR KQKRKAANK+DPRQ      
Sbjct: 61  GSVNLVVSQGKPKFETHEVDPPKKEKWKTKKKLKMQRMRLKQKRKAANKRDPRQ------ 120

Query: 121 LHARIKEALLMERLKRYEVSRVQGPMVKPHNLTAEERFYMKKMGQKRSNYVPIGRRGIFG 180
           L ARIKEALL+ERL+RYEV +VQGPMVKPH+LT EERFY+KKMGQKRSNYVPIGRRG+FG
Sbjct: 121 LRARIKEALLIERLRRYEVPKVQGPMVKPHDLTGEERFYIKKMGQKRSNYVPIGRRGVFG 180

Query: 181 GVILNMHMHWKKHETVKVFCKPCKPGQVHEYAQEIARLSGGIPIQIIGDDTIIFYRGKDY 240
           GVILNMHMHWKKHETVKV+CKPCKPGQVHEYAQEIARLSGGIPIQIIGDDTIIFYRGKDY
Sbjct: 181 GVILNMHMHWKKHETVKVYCKPCKPGQVHEYAQEIARLSGGIPIQIIGDDTIIFYRGKDY 240

Query: 241 VQPEVMSPIDTLSKKRVLNWVGWEKKLYEFYRRLSTKQEEASTVLRVYLRLVLL 295
           VQPEVMSPIDTLSKKR L    +E+ L    R ++  ++E    L +Y R + L
Sbjct: 241 VQPEVMSPIDTLSKKRALEKSKYEQSLESVRRFIAIAEKE----LELYYRHIAL 284

[Close]

BLAST of Lcy05g014040 vs. ExPASy TrEMBL
Match: A0A6J1J3F1 (uncharacterized CRM domain-containing protein At3g25440, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111482313 PE=4 SV=1)

HSP 1 Score: 433.7 bits (1114), Expect = 9.7e-118
Identity = 232/310 (74.84%), Postives = 255/310 (82.26%), Query Frame = 0


Query: 1   MAKSLFCNLRRASLLLRSSFLNQSSFRPILGVPDTTFSQFKHFSLPSISKPLLGFRNLSH 60
           MAKSLF NLRRASLL RS  L Q  FRP+LGVPD+TFS  K+  L +ISKP LGFRNLS+
Sbjct: 1   MAKSLFHNLRRASLLFRSLSLKQPFFRPVLGVPDSTFSHIKNIPLLNISKPFLGFRNLSY 60

Query: 61  GSVNLIISQGKPKFETNDVDPPKKDKWKTKKKLKMQRMREKQKRKAANKKDPRQLLI--- 120
           GSVNL+ISQGKPKFET++VDPPKKDKWKTKKKLKMQRMREKQKRKAANKKDPRQL +   
Sbjct: 61  GSVNLVISQGKPKFETHEVDPPKKDKWKTKKKLKMQRMREKQKRKAANKKDPRQLRVKGK 120

Query: 121 ---------EILLH----ARIKEALLMERLKRYEVSRVQGPMVKPHNLTAEERFYMKKMG 180
                    E + H    ARIKEALL+ERLKRYEV +VQGP+V+PHNLTAEERFYMKKMG
Sbjct: 121 KKQKFSNAEERIKHKLEKARIKEALLIERLKRYEVPKVQGPVVEPHNLTAEERFYMKKMG 180

Query: 181 QKRSNYVPIGRRGIFGGVILNMHMHWKKHETVKVFCKPCKPGQVHEYAQEIARLSGGIPI 240
           QKRSNYVPIGRRG+FGGVILNMHMHWKKHETVKVFCKPCKPGQVHEYAQEIARLSGGIPI
Sbjct: 181 QKRSNYVPIGRRGVFGGVILNMHMHWKKHETVKVFCKPCKPGQVHEYAQEIARLSGGIPI 240

Query: 241 QIIGDDTIIFYRGKDYVQPEVMSPIDTLSKKRVLNWVGWEKKLYEFYRRLSTKQEEASTV 295
           QIIGDDTIIFYRGK+YVQP VMSPIDTLSKKR L    +E+ L    R ++  ++E    
Sbjct: 241 QIIGDDTIIFYRGKEYVQPVVMSPIDTLSKKRALEKSKYEQSLESVRRFIAIAEKE---- 300

[Close]

BLAST of Lcy05g014040 vs. ExPASy TrEMBL
Match: A0A5A7UFD6 (CRM-domain containing factor CFM3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G007520 PE=4 SV=1)

HSP 1 Score: 432.2 bits (1110), Expect = 2.8e-117
Identity = 229/310 (73.87%), Postives = 254/310 (81.94%), Query Frame = 0


Query: 1   MAKSLFCNLRRASLLLRSSFLNQSSFRPILGVPDTTFSQFKHFSLPSISKPLLGFRNLSH 60
           MAKSLF NLRRASLL RSS LNQ SFRPIL +PDT FSQ K+F   +ISKPLLGFRNLSH
Sbjct: 1   MAKSLFHNLRRASLLFRSSSLNQLSFRPILVIPDTVFSQIKNFPEANISKPLLGFRNLSH 60

Query: 61  GSVNLIISQGKPKFETNDVDPPKKDKWKTKKKLKMQRMREKQKRKAANKKDPRQLLIE-- 120
           GSVNL+++QGKPKFET+ VDPPKK+KWKTKKKLKMQRMR KQKRKAANK+DPRQL ++  
Sbjct: 61  GSVNLVVTQGKPKFETHVVDPPKKEKWKTKKKLKMQRMRSKQKRKAANKRDPRQLRVKGK 120

Query: 121 --------------ILLHARIKEALLMERLKRYEVSRVQGPMVKPHNLTAEERFYMKKMG 180
                          L  ARIKEALL+ERLKRYEV  VQGP+VKPHNLTAEERFY+KKMG
Sbjct: 121 KKQKFPNAAERIKNKLERARIKEALLIERLKRYEVPEVQGPIVKPHNLTAEERFYIKKMG 180

Query: 181 QKRSNYVPIGRRGIFGGVILNMHMHWKKHETVKVFCKPCKPGQVHEYAQEIARLSGGIPI 240
           QKRSNYVPIGRRG+FGGVILNMHMHWKKHETVKV+CKPCKPGQVHEYAQEIARLSGGIPI
Sbjct: 181 QKRSNYVPIGRRGVFGGVILNMHMHWKKHETVKVYCKPCKPGQVHEYAQEIARLSGGIPI 240

Query: 241 QIIGDDTIIFYRGKDYVQPEVMSPIDTLSKKRVLNWVGWEKKLYEFYRRLSTKQEEASTV 295
           QIIGDDTIIFYRGK+YVQPEVMSPI TLSKKR L    +E+ L    R ++  ++E    
Sbjct: 241 QIIGDDTIIFYRGKEYVQPEVMSPIGTLSKKRALEKSKYEQSLESVRRFIAIAEKE---- 300

[Close]

BLAST of Lcy05g014040 vs. ExPASy TrEMBL
Match: A0A1S3B7C2 (CRM-domain containing factor CFM3, chloroplastic/mitochondrial OS=Cucumis melo OX=3656 GN=LOC103486957 PE=4 SV=1)

HSP 1 Score: 432.2 bits (1110), Expect = 2.8e-117
Identity = 229/310 (73.87%), Postives = 254/310 (81.94%), Query Frame = 0


Query: 1   MAKSLFCNLRRASLLLRSSFLNQSSFRPILGVPDTTFSQFKHFSLPSISKPLLGFRNLSH 60
           MAKSLF NLRRASLL RSS LNQ SFRPIL +PDT FSQ K+F   +ISKPLLGFRNLSH
Sbjct: 1   MAKSLFHNLRRASLLFRSSSLNQLSFRPILVIPDTVFSQIKNFPEANISKPLLGFRNLSH 60

Query: 61  GSVNLIISQGKPKFETNDVDPPKKDKWKTKKKLKMQRMREKQKRKAANKKDPRQLLIE-- 120
           GSVNL+++QGKPKFET+ VDPPKK+KWKTKKKLKMQRMR KQKRKAANK+DPRQL ++  
Sbjct: 61  GSVNLVVTQGKPKFETHVVDPPKKEKWKTKKKLKMQRMRSKQKRKAANKRDPRQLRVKGK 120

Query: 121 --------------ILLHARIKEALLMERLKRYEVSRVQGPMVKPHNLTAEERFYMKKMG 180
                          L  ARIKEALL+ERLKRYEV  VQGP+VKPHNLTAEERFY+KKMG
Sbjct: 121 KKQKFPNAAERIKNKLERARIKEALLIERLKRYEVPEVQGPIVKPHNLTAEERFYIKKMG 180

Query: 181 QKRSNYVPIGRRGIFGGVILNMHMHWKKHETVKVFCKPCKPGQVHEYAQEIARLSGGIPI 240
           QKRSNYVPIGRRG+FGGVILNMHMHWKKHETVKV+CKPCKPGQVHEYAQEIARLSGGIPI
Sbjct: 181 QKRSNYVPIGRRGVFGGVILNMHMHWKKHETVKVYCKPCKPGQVHEYAQEIARLSGGIPI 240

Query: 241 QIIGDDTIIFYRGKDYVQPEVMSPIDTLSKKRVLNWVGWEKKLYEFYRRLSTKQEEASTV 295
           QIIGDDTIIFYRGK+YVQPEVMSPI TLSKKR L    +E+ L    R ++  ++E    
Sbjct: 241 QIIGDDTIIFYRGKEYVQPEVMSPIGTLSKKRALEKSKYEQSLESVRRFIAIAEKE---- 300

[Close]

BLAST of Lcy05g014040 vs. NCBI nr
Match: XP_038903000.1 (CRM-domain containing factor CFM9, mitochondrial [Benincasa hispida] >XP_038903001.1 CRM-domain containing factor CFM9, mitochondrial [Benincasa hispida])

HSP 1 Score: 448.4 bits (1152), Expect = 7.9e-122
Identity = 240/310 (77.42%), Postives = 259/310 (83.55%), Query Frame = 0


Query: 1   MAKSLFCNLRRASLLLRSSFLNQSSFRPILGVPDTTFSQFKHFSLPSISKPLLGFRNLSH 60
           MAKSLF NLRRASLL RSS LNQ SFRPILGV DT FSQ  +F+LP+ISKPLLGFRNLSH
Sbjct: 1   MAKSLFHNLRRASLLFRSSSLNQPSFRPILGVSDTIFSQINNFTLPNISKPLLGFRNLSH 60

Query: 61  GSVNLIISQGKPKFETNDVDPPKKDKWKTKKKLKMQRMREKQKRKAANKKDPRQLLI--- 120
           GSVNL+ISQGKPKFET++VDPPKKDKWKTK+KLKMQR REKQKRKA NKKDPRQL +   
Sbjct: 61  GSVNLVISQGKPKFETHEVDPPKKDKWKTKRKLKMQRKREKQKRKAENKKDPRQLRVKGK 120

Query: 121 ---------EILLH----ARIKEALLMERLKRYEVSRVQGPMVKPHNLTAEERFYMKKMG 180
                    E + H    ARIKEALL+ERLKRYEV RVQGP+VKPHNLTAEERFYMKKMG
Sbjct: 121 KKQKFSNAEERIKHKLEKARIKEALLVERLKRYEVPRVQGPIVKPHNLTAEERFYMKKMG 180

Query: 181 QKRSNYVPIGRRGIFGGVILNMHMHWKKHETVKVFCKPCKPGQVHEYAQEIARLSGGIPI 240
           QKRSNYVPIGRRGIFGGVILNMHMHWKKHETVKVFCKPCKPGQVHEYAQEIARLSGGIPI
Sbjct: 181 QKRSNYVPIGRRGIFGGVILNMHMHWKKHETVKVFCKPCKPGQVHEYAQEIARLSGGIPI 240

Query: 241 QIIGDDTIIFYRGKDYVQPEVMSPIDTLSKKRVLNWVGWEKKLYEFYRRLSTKQEEASTV 295
           QIIGDDTIIFYRGK+YVQPEVMSPIDTLSKKR L    +E+ L    R ++  ++E    
Sbjct: 241 QIIGDDTIIFYRGKEYVQPEVMSPIDTLSKKRALEKSKYEQSLESVRRFIAIAEKE---- 300

[Close]

BLAST of Lcy05g014040 vs. NCBI nr
Match: XP_022935659.1 (uncharacterized CRM domain-containing protein At3g25440, chloroplastic [Cucurbita moschata])

HSP 1 Score: 444.1 bits (1141), Expect = 1.5e-120
Identity = 237/310 (76.45%), Postives = 260/310 (83.87%), Query Frame = 0


Query: 1   MAKSLFCNLRRASLLLRSSFLNQSSFRPILGVPDTTFSQFKHFSLPSISKPLLGFRNLSH 60
           MAKSLF NLRRASLL RSS LNQ  FRP+LGVPD+TFS+ K+F L +ISKPLLGFRNLS+
Sbjct: 1   MAKSLFHNLRRASLLFRSSSLNQPFFRPVLGVPDSTFSRIKNFPLLNISKPLLGFRNLSY 60

Query: 61  GSVNLIISQGKPKFETNDVDPPKKDKWKTKKKLKMQRMREKQKRKAANKKDPRQLLI--- 120
           GSVNL+ISQGKPKFET++VDPPKKDKWKTKKKLKMQR REKQKRKAANKKDPRQL +   
Sbjct: 61  GSVNLVISQGKPKFETHEVDPPKKDKWKTKKKLKMQRKREKQKRKAANKKDPRQLRVKGK 120

Query: 121 ---------EILLH----ARIKEALLMERLKRYEVSRVQGPMVKPHNLTAEERFYMKKMG 180
                    E + H    ARIKEALL+ERLKRYEV RVQGP+V+PHNLTAEERFYMKKMG
Sbjct: 121 KKQKFSNAEERIKHKLEKARIKEALLIERLKRYEVPRVQGPVVEPHNLTAEERFYMKKMG 180

Query: 181 QKRSNYVPIGRRGIFGGVILNMHMHWKKHETVKVFCKPCKPGQVHEYAQEIARLSGGIPI 240
           QKRSNYVPIGRRG+FGGVILNMHMHWKKHETVKVFCKPCKPGQVHEYAQEIARLSGGIPI
Sbjct: 181 QKRSNYVPIGRRGVFGGVILNMHMHWKKHETVKVFCKPCKPGQVHEYAQEIARLSGGIPI 240

Query: 241 QIIGDDTIIFYRGKDYVQPEVMSPIDTLSKKRVLNWVGWEKKLYEFYRRLSTKQEEASTV 295
           QIIGDDTIIFYRGK+YVQPEVMSPIDTLSKKR L    +E+ L    R ++  ++E    
Sbjct: 241 QIIGDDTIIFYRGKEYVQPEVMSPIDTLSKKRALEKSKYEQSLESVRRFIAIAEKE---- 300

[Close]

BLAST of Lcy05g014040 vs. NCBI nr
Match: KAG7017679.1 (putative CRM domain-containing protein, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 443.0 bits (1138), Expect = 3.3e-120
Identity = 236/310 (76.13%), Postives = 260/310 (83.87%), Query Frame = 0


Query: 1   MAKSLFCNLRRASLLLRSSFLNQSSFRPILGVPDTTFSQFKHFSLPSISKPLLGFRNLSH 60
           MAKSLF NLRRASLL RSS LNQ  FRP+LGVPD+TFS+ K+F L +IS+PLLGFRNLS+
Sbjct: 1   MAKSLFHNLRRASLLFRSSSLNQPFFRPVLGVPDSTFSRIKNFPLLNISRPLLGFRNLSY 60

Query: 61  GSVNLIISQGKPKFETNDVDPPKKDKWKTKKKLKMQRMREKQKRKAANKKDPRQLLI--- 120
           GSVNL+ISQGKPKFET++VDPPKKDKWKTKKKLKMQR REKQKRKAANKKDPRQL +   
Sbjct: 61  GSVNLVISQGKPKFETHEVDPPKKDKWKTKKKLKMQRKREKQKRKAANKKDPRQLRVKGK 120

Query: 121 ---------EILLH----ARIKEALLMERLKRYEVSRVQGPMVKPHNLTAEERFYMKKMG 180
                    E + H    ARIKEALL+ERLKRYEV RVQGP+V+PHNLTAEERFYMKKMG
Sbjct: 121 KKQKFSNAEERIKHKLEKARIKEALLIERLKRYEVPRVQGPVVEPHNLTAEERFYMKKMG 180

Query: 181 QKRSNYVPIGRRGIFGGVILNMHMHWKKHETVKVFCKPCKPGQVHEYAQEIARLSGGIPI 240
           QKRSNYVPIGRRG+FGGVILNMHMHWKKHETVKVFCKPCKPGQVHEYAQEIARLSGGIPI
Sbjct: 181 QKRSNYVPIGRRGVFGGVILNMHMHWKKHETVKVFCKPCKPGQVHEYAQEIARLSGGIPI 240

Query: 241 QIIGDDTIIFYRGKDYVQPEVMSPIDTLSKKRVLNWVGWEKKLYEFYRRLSTKQEEASTV 295
           QIIGDDTIIFYRGK+YVQPEVMSPIDTLSKKR L    +E+ L    R ++  ++E    
Sbjct: 241 QIIGDDTIIFYRGKEYVQPEVMSPIDTLSKKRALEKSKYEQSLESVRRFIAIAEKE---- 300

[Close]

BLAST of Lcy05g014040 vs. NCBI nr
Match: XP_004136676.1 (uncharacterized CRM domain-containing protein At3g25440, chloroplastic [Cucumis sativus] >KAE8651200.1 hypothetical protein Csa_000955 [Cucumis sativus])

HSP 1 Score: 434.1 bits (1115), Expect = 1.5e-117
Identity = 229/310 (73.87%), Postives = 255/310 (82.26%), Query Frame = 0


Query: 1   MAKSLFCNLRRASLLLRSSFLNQSSFRPILGVPDTTFSQFKHFSLPSISKPLLGFRNLSH 60
           MAKSLF NLRRA LL RSS LNQ SFRPIL +PDT FSQ K F   +ISKPLLGFRNLSH
Sbjct: 1   MAKSLFHNLRRAPLLFRSSSLNQLSFRPILEIPDTVFSQIKKFPEANISKPLLGFRNLSH 60

Query: 61  GSVNLIISQGKPKFETNDVDPPKKDKWKTKKKLKMQRMREKQKRKAANKKDPRQLLIE-- 120
           GSVNL++SQGKPKFET++VDPPKK+KWKTKKKLKMQRMR KQKRKAANK+DPRQL ++  
Sbjct: 61  GSVNLVVSQGKPKFETHEVDPPKKEKWKTKKKLKMQRMRLKQKRKAANKRDPRQLRVKGK 120

Query: 121 --------------ILLHARIKEALLMERLKRYEVSRVQGPMVKPHNLTAEERFYMKKMG 180
                          L +ARIKEALL+ERL+RYEV +VQGPMVKPH+LT EERFY+KKMG
Sbjct: 121 KKQKFPNAAERIKNKLENARIKEALLIERLRRYEVPKVQGPMVKPHDLTGEERFYIKKMG 180

Query: 181 QKRSNYVPIGRRGIFGGVILNMHMHWKKHETVKVFCKPCKPGQVHEYAQEIARLSGGIPI 240
           QKRSNYVPIGRRG+FGGVILNMHMHWKKHETVKV+CKPCKPGQVHEYAQEIARLSGGIPI
Sbjct: 181 QKRSNYVPIGRRGVFGGVILNMHMHWKKHETVKVYCKPCKPGQVHEYAQEIARLSGGIPI 240

Query: 241 QIIGDDTIIFYRGKDYVQPEVMSPIDTLSKKRVLNWVGWEKKLYEFYRRLSTKQEEASTV 295
           QIIGDDTIIFYRGKDYVQPEVMSPIDTLSKKR L    +E+ L    R ++  ++E    
Sbjct: 241 QIIGDDTIIFYRGKDYVQPEVMSPIDTLSKKRALEKSKYEQSLESVRRFIAIAEKE---- 300

[Close]

BLAST of Lcy05g014040 vs. NCBI nr
Match: XP_022983806.1 (uncharacterized CRM domain-containing protein At3g25440, chloroplastic [Cucurbita maxima])

HSP 1 Score: 433.7 bits (1114), Expect = 2.0e-117
Identity = 232/310 (74.84%), Postives = 255/310 (82.26%), Query Frame = 0


Query: 1   MAKSLFCNLRRASLLLRSSFLNQSSFRPILGVPDTTFSQFKHFSLPSISKPLLGFRNLSH 60
           MAKSLF NLRRASLL RS  L Q  FRP+LGVPD+TFS  K+  L +ISKP LGFRNLS+
Sbjct: 1   MAKSLFHNLRRASLLFRSLSLKQPFFRPVLGVPDSTFSHIKNIPLLNISKPFLGFRNLSY 60

Query: 61  GSVNLIISQGKPKFETNDVDPPKKDKWKTKKKLKMQRMREKQKRKAANKKDPRQLLI--- 120
           GSVNL+ISQGKPKFET++VDPPKKDKWKTKKKLKMQRMREKQKRKAANKKDPRQL +   
Sbjct: 61  GSVNLVISQGKPKFETHEVDPPKKDKWKTKKKLKMQRMREKQKRKAANKKDPRQLRVKGK 120

Query: 121 ---------EILLH----ARIKEALLMERLKRYEVSRVQGPMVKPHNLTAEERFYMKKMG 180
                    E + H    ARIKEALL+ERLKRYEV +VQGP+V+PHNLTAEERFYMKKMG
Sbjct: 121 KKQKFSNAEERIKHKLEKARIKEALLIERLKRYEVPKVQGPVVEPHNLTAEERFYMKKMG 180

Query: 181 QKRSNYVPIGRRGIFGGVILNMHMHWKKHETVKVFCKPCKPGQVHEYAQEIARLSGGIPI 240
           QKRSNYVPIGRRG+FGGVILNMHMHWKKHETVKVFCKPCKPGQVHEYAQEIARLSGGIPI
Sbjct: 181 QKRSNYVPIGRRGVFGGVILNMHMHWKKHETVKVFCKPCKPGQVHEYAQEIARLSGGIPI 240

Query: 241 QIIGDDTIIFYRGKDYVQPEVMSPIDTLSKKRVLNWVGWEKKLYEFYRRLSTKQEEASTV 295
           QIIGDDTIIFYRGK+YVQP VMSPIDTLSKKR L    +E+ L    R ++  ++E    
Sbjct: 241 QIIGDDTIIFYRGKEYVQPVVMSPIDTLSKKRALEKSKYEQSLESVRRFIAIAEKE---- 300

[Close]

BLAST of Lcy05g014040 vs. TAIR 10
Match: AT2G28480.1 (RNA-binding CRS1 / YhbY (CRM) domain protein )

HSP 1 Score: 311.2 bits (796), Expect = 1.4e-84
Identity = 174/311 (55.95%), Postives = 222/311 (71.38%), Query Frame = 0


Query: 1   MAKSLFCNLRRASLLLRSSFLNQSSFRPILGVPDTTFSQFKHFSLPSISKPLLGFRNLSH 60
           MA +    LR+AS  LRSS+    S R +L +    +     F LP  ++P+   RN SH
Sbjct: 1   MAIAFARGLRKASSFLRSSYPLLISSR-LLPISQEFYDSTLTFVLP--TRPIC--RNFSH 60

Query: 61  --GSVNLIISQGKPKFETNDVDPPKKDKWKTKKKLKMQRMREKQKRKAANKKDPRQLLIE 120
             G+VNL+IS+GKPKFET ++DPPKK KW TKK+LK++R +E+++R AAN+KDPR+L ++
Sbjct: 61  GYGTVNLVISEGKPKFETRELDPPKKYKWLTKKRLKLKRKKEREERNAANRKDPRRLTVK 120

Query: 121 ---------------ILLHARIKEALLMERLKRYEVSRVQGPMVKPHNLTAEERFYMKKM 180
                           L  A+IKEALL+ERLKRYEV++VQGP V+PH +T EERFY+KKM
Sbjct: 121 GKKKKFVNAEERIKYKLEKAKIKEALLIERLKRYEVAKVQGPEVRPHEITGEERFYLKKM 180

Query: 181 GQKRSNYVPIGRRGIFGGVILNMHMHWKKHETVKVFCKPCKPGQVHEYAQEIARLSGGIP 240
           GQKRSNYVPIGRRG+FGGVILNMH+HWKKHETVKV C   KPGQV +YA+E+A+LSGG+P
Sbjct: 181 GQKRSNYVPIGRRGVFGGVILNMHLHWKKHETVKVICNNSKPGQVQQYAEELAKLSGGVP 240

Query: 241 IQIIGDDTIIFYRGKDYVQPEVMSPIDTLSKKRVLNWVGWEKKLYEFYRRLSTKQEEAST 295
           + IIGDDTIIFYRGK YVQP+VMSPIDTLSKKR      +E+ L      ++  ++E   
Sbjct: 241 VNIIGDDTIIFYRGKGYVQPQVMSPIDTLSKKRAYEKSKYEQSLESVRHFIAIAEKE--- 300

[Close]

BLAST of Lcy05g014040 vs. TAIR 10
Match: AT4G13070.1 (RNA-binding CRS1 / YhbY (CRM) domain protein )

HSP 1 Score: 190.3 bits (482), Expect = 3.6e-48
Identity = 110/246 (44.72%), Postives = 155/246 (63.01%), Query Frame = 0


Query: 52  LLGFRNLSHGSVNLIISQGKPKFETNDVD-------PPKKD-KWKTKK---KLKMQRMR- 111
           L   R LS+ ++ L       +F  N+V        P +K+ KWK  K   K K+  +R 
Sbjct: 69  LFSRRYLSNSTIELRTDDNVVRFAFNNVSSSGNNVVPTRKEKKWKRAKLSRKAKVNELRF 128

Query: 112 -EKQKRKAANKKDPRQLLIEILLHARIKEALLMERLKRYEVSRVQGPMVKPHNLTAEERF 171
              + +K  N  +P   +   L  A+ KE  L+E+L++Y+V +       P +LT EE+ 
Sbjct: 129 YRLKAKKKMNSPNPEVRIRYKLEKAKRKEEWLIEKLRKYDVPKSPAEPYDPESLTEEEQH 188

Query: 172 YMKKMGQKRSNYVPIGRRGIFGGVILNMHMHWKKHETVKVFCKPC-KPGQVHEYAQEIAR 231
           Y+K+ G+KR N+V +GRRG+FGGV+LN+H+HWKKHETVKV CKPC KPGQVHEYA+E+AR
Sbjct: 189 YLKRTGEKRKNFVLVGRRGVFGGVVLNLHLHWKKHETVKVICKPCNKPGQVHEYAEELAR 248

Query: 232 LSGGIPIQIIGDDTIIFYRGKDYVQPEVMSPIDTLSKKRVLNWVGWEKKL---YEFYRRL 281
           LS GI I +  ++TI+ YRGK+YV+PEVMSP+DTLSK + L    +E+ L    EF  +L
Sbjct: 249 LSKGIVIDVKPNNTIVLYRGKNYVRPEVMSPVDTLSKDKALEKYRYEQSLEHTSEFIEKL 308

[Close]

BLAST of Lcy05g014040 vs. TAIR 10
Match: AT3G25440.1 (RNA-binding CRS1 / YhbY (CRM) domain protein )

HSP 1 Score: 141.0 bits (354), Expect = 2.5e-33
Identity = 88/207 (42.51%), Postives = 120/207 (57.97%), Query Frame = 0


Query: 72  PKFETNDVDPPKKDKWKTK-----KKLKMQRMREK------------QKRKAANKKDPRQ 131
           P  ET D D  K +   ++      KLK ++++ K            +K+K   +    +
Sbjct: 80  PARETGDDDISKSENSSSQDGDSCTKLKRKKLKGKRAVVRWLKFFRWKKKKEFERMTSEE 139

Query: 132 LLIEILLHARIKEALLMERLKRYEVSRVQGPMVKPHNLTAEERFYMKKMGQKRSNYVPIG 191
            ++  L  AR KE  LME +K+ E S        P  LT EE FY  KMG K  NYVP+G
Sbjct: 140 KILNKLRKARKKEERLMETMKKLEPSESAETTHDPEILTPEEHFYYLKMGLKCKNYVPVG 199

Query: 192 RRGIFGGVILNMHMHWKKHETVKVFCKPCKPGQVHEYAQEIARLSGGIPIQIIGDDTIIF 251
           RRGI+ GVILNMH+HWKKH+T++V  K   P +V E A E+ARL+GGI + +   +TII 
Sbjct: 200 RRGIYQGVILNMHLHWKKHQTLQVVIKTFTPDEVKEIAVELARLTGGIVLDVHEGNTIIM 259

Query: 252 YRGKDYVQP--EVMSPIDTLSKKRVLN 260
           YRGK+YVQP  E+MSP  TL +K+ L+
Sbjct: 260 YRGKNYVQPPTEIMSPRITLPRKKALD 286

[Close]

BLAST of Lcy05g014040 vs. TAIR 10
Match: AT3G25440.2 (RNA-binding CRS1 / YhbY (CRM) domain protein )

HSP 1 Score: 141.0 bits (354), Expect = 2.5e-33
Identity = 88/207 (42.51%), Postives = 120/207 (57.97%), Query Frame = 0


Query: 72  PKFETNDVDPPKKDKWKTK-----KKLKMQRMREK------------QKRKAANKKDPRQ 131
           P  ET D D  K +   ++      KLK ++++ K            +K+K   +    +
Sbjct: 16  PARETGDDDISKSENSSSQDGDSCTKLKRKKLKGKRAVVRWLKFFRWKKKKEFERMTSEE 75

Query: 132 LLIEILLHARIKEALLMERLKRYEVSRVQGPMVKPHNLTAEERFYMKKMGQKRSNYVPIG 191
            ++  L  AR KE  LME +K+ E S        P  LT EE FY  KMG K  NYVP+G
Sbjct: 76  KILNKLRKARKKEERLMETMKKLEPSESAETTHDPEILTPEEHFYYLKMGLKCKNYVPVG 135

Query: 192 RRGIFGGVILNMHMHWKKHETVKVFCKPCKPGQVHEYAQEIARLSGGIPIQIIGDDTIIF 251
           RRGI+ GVILNMH+HWKKH+T++V  K   P +V E A E+ARL+GGI + +   +TII 
Sbjct: 136 RRGIYQGVILNMHLHWKKHQTLQVVIKTFTPDEVKEIAVELARLTGGIVLDVHEGNTIIM 195

Query: 252 YRGKDYVQP--EVMSPIDTLSKKRVLN 260
           YRGK+YVQP  E+MSP  TL +K+ L+
Sbjct: 196 YRGKNYVQPPTEIMSPRITLPRKKALD 222

[Close]

BLAST of Lcy05g014040 vs. TAIR 10
Match: AT3G27550.1 (RNA-binding CRS1 / YhbY (CRM) domain protein )

HSP 1 Score: 135.2 bits (339), Expect = 1.4e-31
Identity = 78/192 (40.62%), Postives = 119/192 (61.98%), Query Frame = 0


Query: 91  KKLKMQRMREKQKRKAANKK--DPRQLLIEILLHARIKEALLMERLKRYEVSRVQGPMVK 150
           +K   + +RE ++ K   KK     + LI  L  A+ K ALL+++LK+Y++  +  P+  
Sbjct: 29  RKESGKTLREIRRAKKLKKKLMTDEERLIYNLKRAKKKVALLLQKLKKYDLPELPSPVHD 88

Query: 151 PHNLTAEERFYMKKMGQKRSNYVPIGRRGIFGGVILNMHMHWKKHETVKVFCKPCKPGQV 210
           P   T+E+    KK+G K  NYVP+G RG+FGGV+ NMHMHWK HETV+V C      ++
Sbjct: 89  PELFTSEQVQAFKKIGFKNKNYVPVGVRGVFGGVVQNMHMHWKFHETVQVCCDNFPKEKI 148

Query: 211 HEYAQEIARLSGGIPIQIIGDDTIIFYRGKDYVQPEVMSPIDTLSKKRVLNWVGWEKKLY 270
            E A  IARLSGG+ I I    TII +RG++Y QP+ + P++TL+K++ L    +E+ L 
Sbjct: 149 KEMASMIARLSGGVVINIHNVKTIIMFRGRNYRQPKNLIPVNTLTKRKALFKARFEQALE 208

Query: 271 EFYRRLSTKQEE 281
              ++L+ K+ E
Sbjct: 209 S--QKLNIKKTE 218

The following BLAST results are available for this feature:

BLAST of Lcy05g014040 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q67XL4	3.5e-32	42.51	Uncharacterized CRM domain-containing protein At3g25440, chloroplastic OS=Arabid...	[more]
Q9LT57	1.9e-30	40.63	CRM-domain containing factor CFM9, mitochondrial OS=Arabidopsis thaliana OX=3702...	[more]
Q2R1U8	1.4e-17	38.94	CRM-domain containing factor CFM3, chloroplastic/mitochondrial OS=Oryza sativa s...	[more]
F4J2U9	1.6e-16	38.05	CRM-domain containing factor CFM3A, chloroplastic/mitochondrial OS=Arabidopsis t...	[more]
F4JVH1	1.3e-15	37.27	CRM-domain containing factor CFM3B, chloroplastic OS=Arabidopsis thaliana OX=370...	[more]

BLAST of Lcy05g014040 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F621	7.2e-121	76.45	uncharacterized CRM domain-containing protein At3g25440, chloroplastic OS=Cucurb...	[more]
A0A0A0LF61	5.2e-119	77.55	CRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G823620 PE=4 SV...	[more]
A0A6J1J3F1	9.7e-118	74.84	uncharacterized CRM domain-containing protein At3g25440, chloroplastic OS=Cucurb...	[more]
A0A5A7UFD6	2.8e-117	73.87	CRM-domain containing factor CFM3 OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A1S3B7C2	2.8e-117	73.87	CRM-domain containing factor CFM3, chloroplastic/mitochondrial OS=Cucumis melo O...	[more]

BLAST of Lcy05g014040 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038903000.1	7.9e-122	77.42	CRM-domain containing factor CFM9, mitochondrial [Benincasa hispida] >XP_0389030...	[more]
XP_022935659.1	1.5e-120	76.45	uncharacterized CRM domain-containing protein At3g25440, chloroplastic [Cucurbit...	[more]
KAG7017679.1	3.3e-120	76.13	putative CRM domain-containing protein, chloroplastic, partial [Cucurbita argyro...	[more]
XP_004136676.1	1.5e-117	73.87	uncharacterized CRM domain-containing protein At3g25440, chloroplastic [Cucumis ...	[more]
XP_022983806.1	2.0e-117	74.84	uncharacterized CRM domain-containing protein At3g25440, chloroplastic [Cucurbit...	[more]

BLAST of Lcy05g014040 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G28480.1	1.4e-84	55.95	RNA-binding CRS1 / YhbY (CRM) domain protein	[more]
AT4G13070.1	3.6e-48	44.72	RNA-binding CRS1 / YhbY (CRM) domain protein	[more]
AT3G25440.1	2.5e-33	42.51	RNA-binding CRS1 / YhbY (CRM) domain protein	[more]
AT3G25440.2	2.5e-33	42.51	RNA-binding CRS1 / YhbY (CRM) domain protein	[more]
AT3G27550.1	1.4e-31	40.63	RNA-binding CRS1 / YhbY (CRM) domain protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 90..110
None	No IPR available	PANTHER	PTHR31426:SF2	GROUP II INTRON SPLICING FACTOR CRS1-LIKE	coord: 1..290
IPR001890	RNA-binding, CRM domain	SMART	SM01103	CRS1_YhbY_2	coord: 152..236 e-value: 6.4E-25 score: 98.8
IPR001890	RNA-binding, CRM domain	PFAM	PF01985	CRS1_YhbY	coord: 152..236 e-value: 3.4E-17 score: 62.4
IPR001890	RNA-binding, CRM domain	PROSITE	PS51295	CRM	coord: 150..247 score: 18.587076
IPR035920	YhbY-like superfamily	GENE3D	3.30.110.60		coord: 151..250 e-value: 4.2E-22 score: 80.0
IPR035920	YhbY-like superfamily	SUPERFAMILY	75471	YhbY-like	coord: 151..246
IPR040286	CRM domain-containing protein At3g25440-like	PANTHER	PTHR31426	GROUP II INTRON SPLICING FACTOR CRS1-LIKE	coord: 1..290

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy05g014040.1	Lcy05g014040.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003723	RNA binding