Lcy05g013720 (gene) Sponge gourd (P93075) v1

Overview
NameLcy05g013720
Typegene
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Descriptioncoiled-coil domain-containing protein 12-like
LocationChr05: 16585506 .. 16599025 (+)
RNA-Seq ExpressionLcy05g013720
SyntenyLcy05g013720
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CACTAACCCAAGCGCTCTCTCTTCCTCCATCTCCTTCGTCGAAACCCCCCTCCCCCTTTGGCCGTGTAGTCCAGCCGCCGCCGGAGGTCGAAGCGCCGCCGCCCGTTTCTGTCGACTGCAGCAGCGCCGCCGGCCGTCCAGCTCCGTGGGTCGCGCATCTCTCTCCCTCTCTTGCGATCTTTCTCTCTCCGTGGGTGTCTTAGTGGCCTCGTTTCTCTCTCTCTCGTGTTGCCGTGAACCCGTCCAGCCACTGCCGCATAAACGCGCCCCGCCGCCGCTATCTGCAGCAGGTGTGTCGCCGCCGTCCGTGGGTCGTAGCCCGAGCGCCGCCGCCCAGCGTCCATCGCGTTATCTCTCTTCCCCGTGCCGTCTTTGTGGGTTTTTTCGCCGAGAAGTGAAAAACCCGTGGTAAGCCTCTTTCTTCCTCACTCTTAGTTGATTAAGATCCGATCTAAAGTTTCCTTTGCTCTGTTTCGGTTAGATCTCGTGCGGCCAGCATCTTGGAGTTCTTTCTCTCGCGTTTTCACCTCTGTCCAGCGACATTCTTGGGCATTTTCGGCACCGTCGAGCGATTCTGGTAAGTCTAGACACTTACCCATGGTTGGTTAGTGCTGGAATCAAAATGGCCATTTGTTTATGTGATGGAAATCTAAGTTGGTGTTTAACTTTCTGATCTGCTGCGCCGTTAAAGTGATCGATTGGGTTCGAATCGCTGTAAGCTTGAATACCCACTGCCTTAGGATCTTTTGGTGACCTATCCGGGATTAGTAAGACCTGTCTCGGCGTGGTTTCGGGTCTGTTTGGGTAAGAAGCCTTGCTACTTATGGTTTAAATGCATGCTAGGTCGTTACCCATTAACTGTTTAATCCTTGTTAGCTTTGCCCAACTCCTATAGGTCCTTAGAATGTGAAATAAATGAGTTCCTGCTTGCCGTCTATGGTTTAAAAACATGCTAAATCGATTCTCAATTAATTATCTAGGCCTTACTTGCGTTGTCCAGTCGCTAGGAGTTCTTAGGATGCTAAATAAGCTTTGTTTGCTTGCTGTCCAACGGCTGAAAAGCCTTAAATATGGCCATTCAACAGATACCCATTGCCCACGTGGTTTCCCATGGTCTAAAGGTGTTGGGTTTTCAACTTGGGGAACTTGGAGTTGCTGTCCAGCAAGAAAACAGTCCATTCTCGGTTGAATTTGGCCATGTTTAAAGTATCTTTGGGTTGGTTCTAATTTAGTAGAGGTGGTCCATGTTATTTAGGAGCTTCTTGGACTACCTTGGATTGTTGAAGTTGCTTTAGAAGTGCTGTAAGTAGTTTCTACTTGCTGGGTTATGTTTGACCGCATGAAGCATGTTTGCTTGTTATTTGCTTTACTTATATTTGTGCAAAGTATGAATTGCTGAGTTAAGATGATTTGGATCTCACTGCAAAATTAAGAGAGAGAGGCCTCCAGATCCATTCAGGCGTCTTTTTCTCCTTCATCTTCAACAATGGAGAAATGAGAAAGTAGTTATAGATAGGAAAATGTTTATGCTCCGCAAGAGTGGGTGTGGAAAGAAAATCTCAGTGGAGGAACACAATGTTTCTAAAACCAGGAGGGTGTAGTTAGACGTGGGTATTGCAGCTTGGGTTCGTGATTGTCTATCGACGGTGTCCAAAGCGGGTCGTCTGGTGGGTTTTTGGAGAAGACGTAGGCTAGAGGCAGCAATCATATTCTTTCAGGTGCTTTCAAACGCTAGAGGAAAATATGGTTTGTTATTGTTGGAGCCCTTCAAAGGTAGAAGAATCAAAATTTTCTTTCTAGAGGGAGCAAAGGGGAAGGGTTGGGCCACTATGGCTGATGAATTTTCGGCCTTAATCGATTCTAAAGGGAGTAGGAGGGAATCGAAGGGCTCGGTACAACAATAGCGGAACGACCCATTGCCTACTTAGGACGAGTCTGAGAGATTGATAGCAAAGGAGTCCTTTGCCTCTGTTGTTGCTGAGGGATTGGGTCAGGGAGAAAAAAGGAAAAGTAGAGATAGAGAGCTTTGAGTACTCAGAAGATCTGGACTTCACATTCGATTGTTCATCATTGGTCATCATCGAAAGATTCTCGATAGGGGATACGTGGTTCTTGATTAGAGAGGCGATTCAAAAGTCGGTGCAAGTGGATATGGTTTTCAAGACGTTCTGTGCGAACCTAGCGGTAGGAATATGTGGGAGCTTTGTGGTAGCTAAAGAAGTTCTAGAATTAGGTATCAAAGCTGATCCAAAGGTTTTCCGAGTGAGTGAATGGAATTTGAAAAATTGAAATTAATTGCAGAGGGAAGAAAGTTGGCTTTTGCAAGGGGCTGGGTCTCGGTGTTGGATGTCCCTCCATTCCTAAGGACGAGAAACTTAATTTCCTCCCTACCGAACTTATGTGGGGGGTTGACAAAGGACGAGGAGATGTTTGGTGATGAGATCTCGATGGAAGAAATCAGCTTCAAGGCTAAAGGTAAGAACGATAGCTTCATCCCTCTGCTTGGGTATTTACACCACAACGGTATCTACTTTTCGATAAGATTCATAACCGGCCGGCGAACAGAGGTGGAAGATAGGGAAAGCACAGAAGATGGAAATGGTCTTGATCAACAGGTAATCTTCAGTCTGCCAGAGTCGGCGAGGGTGGCGGGTTAGATTATACAGAAAAGTACAACTCACGTGAAGAAGAAAGAAAAAGAAAGAGAGTCTGATCCCGTGTTTAATGATAAGAAAGAGGATGGGCCTTCGGTGGGTGTGAATGTGGGCCTCGAAAACTCTTATAAAATCAAGCCCACTAGGGCCCTTAAATATTTGAAGGTCGGTCATCTGAAGGGGGGGGACCAATTTTAAAATCCTAAAACGAGGGGAGACTAGTAACGCAGTATTTGAGGATCATGAGCTGGACTCAGCCATTAATTCGGAAGCCCAAGTAGGAGAGATCAATGGGCTAGACTCCAAAATTGAGATGGAAAGAAGTATGGGTACGGGGACTTCAGAACCGTTGCTAGGGGAAGATAGATATGTATCAGACCGTTCTATTGTAAGCTACTTTGATGATGAATCTTTCCTCTCAACTCCATACACAAGTTAGATGGCAGTGGTTAATTTACAAGATTTGTTTGAGGATGATAACCGATTAGAGGTAGCTATGCCAGCCACGAAAGCCAAGGATATTGAGAAGACCCGAGAGGAAGAAGGTGATAAGCAGGAGCCCAAAGACTATGTTTCGGATCCTTCTATCAACCAATTGAAAGGGAGGTATCAAATTGAGCCAATATCGGTCAATCCTTCTCAGGTGCCATCCCAGGTATGCTCTATCGAGACAACTAACCAGGTATGCCCTTTTTCTTCGGCTTTTGCTCCGACCTTTTTGGGATTTGGCCTGGGGGGTTAATGAATTTTTTAGTCCCATCGTTAGTGGAATTTCCTCCTTACTTTGGTATGTCGTCGGGGGAGGGGCATAGGGATGCCTCTCCAATTTCGGTCTCACCTTCGCCTTTGTTGTGTAACTCGTTTTCAGGTCAAGGAAGTGTCATGCCTCACCCAGTTTTTTACTCTTTGGGGGAGAGTGTTCCAAATTTTCCACCACTGTCGGGGGGAGCCTTGAGGGGGAGGTCATTTCTTTCCCAATGGGGGAGCGGTTGGGAACTTAGGTTATTTGCCTAGTCCTCTAGGTTTTTCAGGATTTCCTTTCAATGGGGTCCAATTGGGCATTGGCCGTCGAGTTGGGATGCGCTTGCTTCTGTGGGTATCTAAGCTATTCCAGCTGGTGAGATCCAAAAAGAATATGCCCCCTCATCGAAGAAAAAGGCAGAGAAAAGACTGAGGGTGGGAATAAAAAGAAATATGTTAACGAATTAGAAAACTAGACTATTCAATGAACTATGAGAGGAAGAAAGCTTCTAAGGAAGTGGGGATTGAGTCAATTTCTTAATGAAAATTCTTGCTGGGAATGTGAGGAGTTGGGGGGGGAAGGTTAAGAGGTCGTTAGTTAAAGAAACTATTTCGTTGGAAAACCCTGATATCGTCATTCTACTGAAATCTAAAAGAGAGTCCGTTGATGGTCAGTTGGTGAGAAGCCTCTAGGGCAACAAGCATGTAGATTGGGAGATTTTGGAGTCCTTTGGAGCCTCAGGTGGCATTTTGTTGCTTTGGGATAGTAGGTTGGTTTCCCCGGTTGAGGTGGTTAAGGGTTGTTTTTCGTTGTCCATATCTTTTCGATCCAAAGACGATGAGTTGAGGTGGGTGTCAGGGGTGTATGGCCCCCTCAGCATAAAGGTAGGAAGGCGTTCTGGGAAGAGTTGGGGGGTCTCTTTGGCCTTTGCGGATCTTCCTAGTGTGTGGCTGGGGACTTCAACATCATTCACTCTCTTTTAGAGAAATCCTCAGGAGGGAGGGTGACAAGATCCACGAAAGCGTTCAATGATTTCATCGAGGGGTGTGGCTTGGTTGATCCCCCTCTGCTGAATGGGAAATTCACTTGTGCTAATAGTAGAGCGTGCAGTAGGATTGATCGTTTTCTTTTTTCTAGGGGCTGGATGGATCGGTATGGGAGTGTTAGACAAATGATGGGCCCAAAATCACTTCGGACCAGTGGCCTCTCATTGCAAGCTCGGGTATCATTAAATGGGGTCCCTGTCCCTTCAGGTTCGAGAACATGTGGATGGACCATCCTTCTTTCAAATCTTCCGTTTCCACTTTGGTGGAACATGAATGTTCAGGGGAATTGGGAAGGATGTCATTTTATGGGGAAACTGAGGGTGCTTAAGAATACGTTGGAAGCTTGGAACCGTGAGGTATTTAGGGACTTTAGGATAAAAAGCAAGAGCTGGTGGGGAAAATTAAAAGTCTTGATGAGGTGGAAGAGGAAGGTAATTTAGATGAGAATATAATGGGGGAGTGCCTAGCCCCGAAGGCGGAGCTAGCTGAGGTCATGAGGAGGGAGACTACCAGTTGGAGACAAAAGGCAAGGGTGGCGTGGGCCAAGGATGGTGATTGTAATACTTCCCTTTTCCACCACTGGGCTAATGGTAGGAAAAGTAAAAACCTCATTGATTCTCTGGAAAATGATTCGGGGGTGAAGGTGAAGGGAGTAAAGGACATTGAGGACACGATTCTTTAAGTTTTTTTCAAACCTCTATAACCCAATGATGGAAGCCAAACCCTTTGTGGAAGGGGTGGATTGGCGTCCTATCTCGAAGAGTGAGCAGACAGAGTTGGAGTCTCCTTTCTCCTTGGAAGAGATTAGGAAAGTGGTCTTTGAGAGTGATAGGAATAAGGCCCCGGGCTCGGATGGATTCTCTATGGGCTTCTTTCAGAATAATTGGGACGTTATTAAGGAGGATTTACTTCGGGTGCTTAAGGAATTTTATGAAAGAGGCATTCTGGATAGCTCTCTGAATGAGACTTTTGTGTGTCTTATCCCCAAAATGGAGAAAGTGTCTAATACTAAAGATTTCAGACCCATAAGTCTTGTCATCAGCATCTACAAGATTATTGCTAAAGTGCTTGCAAATAGATTGAGAAAAATTCTCCCTTCGATAATATCAGAGAGCCAAGGCGCGTTTATCCCTGCCTGGGAGACGAATCTTAGACCAGTCCCTCATTGCCAACGAAGCCATTGAGGACTATAGGAGTAGAAAGAAAGAGGGTGTCATTTTTAAAATTGACTTTGAGAAGGCTTATGACCACGTGGATTGGAATTTTCTGGATAAGGTTTTGGCTAGAAAGGGATTTGGTTTTGGTGGAGATCCTGGGTCTGGGGGTGTATTCGTTCTGTTAGATACTTGATCCTCATTAACGGGTGTCCTAAGGGTAGGATCCAGGCTTCTCGAGGCTTAAGACAAAGGGACCCAATATTGCCTTTCCTCTTCCTTCTTGTGATTGATGTTCTTAGTAGACTCATCACAAAAGGGAAGAGGGGAGGTATTATTGAAGGCTTTAAGGTTGGGAAGGATAGCGTCCCCATATCTCATCTTCAGTTTGCAGATGATACGATATTCTTTTGCTCGAGTAAGGAGGAGTCTTTTCTGGTGTTAAACCACGTGCTCACATTCTTTGAGATGATGTCGGGTCTCAAAATCAATAGAGGTAAATGCCAGATATTAGGGATTGCTTGTGAGAATTCTAAGGTGGCTAGGTGGGCGTCTTTCGTGGGTTGTGAGGTGATTGATTTCCCGATGTCATACTTAGGCCTTCCCCTTGGGTACAACCCTAGAAACTCTGCTTTTTGGAACCTCGTGATTCATAAGGTTAGAAAACGTCTCGCTTCCTAGAAAATAAAATTTTTCTCTACAGGGGTAGACTGACTCTTATTCTTTCGGTGTTGAGTGGAATCCTGACTTACTTCTCGTTGTTTAGGGCCCCGGGCAAGGTCTGTGAGCTAAGAAGCACGGACACGGACACGACAGGACACGTCGATACGTCAATTTCTAAAAAACTAAGATACGGACACGTGGAGGATACGTTGTTTTTTTTTTTTTTAAATTTTTAGTATATATATAAATTTTTTTAAAAAAATTTAGTATATATATAATTTTTTAAAAAAATTTTAGTATATATATAATTTTTTTTTAAAATTTTAGTATATATATAAATATAAATTTTTGTAGTTTAACTTCATTCTTTTTTTTTTAATTTAAAAATAGTTGTTGGGCTGGGCTGTGTTTATTTGTCTAGGTTAAGTTGAGGTTTAAGAATATAAAAGGAAATAAAAACTTAAACGTTAAACCTAGCTACCATACGAAGAAAACGAAGTGGTTGCGACTTTTGGAGTTTTTGAGGTAACTTCCGGCGACATTTTCTGAAGCGGACGGTGGTGACGGCTGGTGCGATGAGGGGTGCGTATTAGGGTTTTCTTTTTAAAATTTTTTTAGTTATACAGAACTAGTGGGTCTGTAGATTTGGGCTAGACATGTCCAATACCGTGTCCCAACGTGTCCAAGCGTGTCCGTTTTAAAAAAATAATAATAAAAAAATAGGACACGCAAAATGACGTGTCCGTGTCCGACAGATTCTTCGCCAAATATGACGTGTCTGTGCTTCCTAGTCTGTGAGAGTATTGAGAGGTTGATGAGAAACTTTCTCTGGGATAAGGGTAATATAGGAAAAGATACGCACCTCGTGAGTTGGGAGGTTGTTGGAAAACCTTATCACCTTGGTGGTCTAGAGATTGGTAACCTAAGATCCCGTAACAAAGCCCTTTTAGCGAAATGGTTGTGGCGTTTCCCCCTTGAGTCGTCTTCCTTATGGTACAAGATAATTGTGAGTAAATATGGTCCTCATTCTTTTGAGTGGTTACTGGATGGGGTTGGGGGCATGTTTCGAAATCCATGGAAAGATATTGTTAGGGAGCTCTCTTCCTTTTCTGGTCCTGTGCATCATGTGGTTGGGGATGGGAATGATACAAATTTTTGGGAGGATAGGTGGGTGGGGGATAGACCCCTCTATCTGACCTTCCCTCGTCTCTTTTCGTTGTCCTCCTTGAAAAATCGGACAGTGGCTGACGTTTTGTTCCAATCAGGGAGTTCCCCATCTTTTTCGTTTGGGTTCCGTTGTGACTTGTCCGATAGGGAAACGACGGATGTCATGACTTTTCTTTCCTTGATTGAGGAGTTTGGTTTTAGGTTGGGGAGGAGAGATTTTCGTTGTTGGAGCCCTGACCCTTCTATCGGGTTCTCATGTAAATCCTACTTTATTTCTTTGTTGAATCCTCCTCCCAATAGTGAGTCTGTTTTTATCTCCGGTGGAAAGTGAAAATGCCGAAGAAGGTTAGGTTATTTATTTGGAAAGTTCTCCATGGTAGGGTTAATACCTTTGATAGGCTCCTGAGAAGGAATGTCCTTTTGTTTGGTCCTTTTTGTTGCAACCTTTGTCGGAAGGCGGGGGAAGATTTGGATAATATTCTTTGGAGCTGTGATTTTGCCCGATCTAGTTGGGACATTTTCTTTGATGCGTTTGGGCGACAACGGATCATCTACCCGGATTTGAGAGTGTTGATCGAAGAGTTCCTCCTCAATCCGACCCTCCATGGCAAAGGAAGATTTTTATGGCAGGTCGACATGTGTGCTCTCTTATGGAACTTATGGGGGGAGAGAAACAACAAGGTTTTTAGGGGTATAGTTAGAAGCCCAGATGATGTATGGTCTTTATCGAGATTCCATGCATCCCTTTGGGCATCGATTACCAAACTTTTTTGTAATTATCCTTTAGGTCTGATATTATTGGACTAGAGCCCTTTCCTTTAAGTGGTCTCCGTTTTGTGGGCTTGTTTTTTTTTTTTTTGCCTTGTATTCTTTCATTTATTCTCAATGAAAGCTGGTTTTTATATATAAAAAAAAGTATGAATTGCTGAGTTGTACTGTTGTATTGCTTGGGATGAGCATGTACTGTGTTATTGCTTGGGATGAACATGTACTGATGTATTGCTCGGAATGAGCATGTTTGTGGTGTTTAAACCTGATGAGTGTTGTGTTAAGCACGATGAGTCTGGCTAGCATGTTGCATGGGGATGTGTAGCATGAGTCGGGTGTGAGGCACAGCACATGGTGCGCGATTCATGTGTAGCGGAGCGTGACGCAAAAATCATGTGAGTGTGAGTGCGGAGCGTGACGCGAAAATCATGTATGAGTGGCGTAACACATGACGCGTAATTTATGTGGGGTAGGTGCAAAGCATGACGCGGAAATGAGCATGACGCGGAAATCATGTAATTGCGGAGCATGGCGCAAAAATCATGTAAATGCAGAGCATGACGTGGAAATCATGTAAATGCGGAGCATGACGCGGAAATCATGTAGTGTCTAGTGTGTGCATTGCATGGTGTGAGATGCATGATGGTTGTAATTGTTTGTTGTTTGTAACTTAGTAAGTGTGAGCTGCTTACCAGTACCACGATTGTACTGATACCCCTTCCCTATCTCCTCCCAACATTTTAGATGTTGCAGATATGGAAGATGAACCAGACTATGGTGGTGAGGAGGAGAACTTCGGGGAGGAATCCTAATGTGTTGGAGTTTCTTTTTGGTTAGGCTTTGGATAGGCTAGTTTCGGTAAAATTGAAATATTGTTCCTGAAATATTGTTCCTGTTGTGGTGAGAGGTTCACCTAGTTGTCTATGTTTTTATGAATTGGAGGTTTAGTGTTGTTTTTAGTCTTGATGGTAGAATAAAAGTTGTTTTAGTTAGCATGTTGCTGTGCTGAATTAATAAAGAGTTAGAAATATGTTATGCTGCATGGTTTAGTTTAATGCTTTCCTCTAGATGTTGCTATGAGATCTGACTCGTATAGTGAAGCTAGGTTGTGAATCAGAAAATGAAGTTTGGTGAAGTTGGGTTAAGTGTTTAGAAGTGTTGTTGTGCTTATATTAGGTTAAAGAAAAATTTTGGGTTAGCTGGTTTTACGTTGTTATGTTGTCAAAATTTTCGGTACACTCGGTTTAAATGGCTTAGAGTCGGTAAGTGGTTTAGAGATTAAGTTGCGTTGCTAGGCTAGTGGTTTAAAGAACCTGGGGCGTGACATCCACCCTTCTTTCGCTTCTTTCTGATGATTTTTTGTCATATGTGGCTTTCTCGAAGGTTAATTATTTGAATTATTTGGCTGTGTACTTTGCGAATGTCTTTGTATTGTCATGATTTTTCTTTAATTTGTCTTTTGCGGTTCCTCATCCCTCTGAATGCATATAACTGTGGTATTGTCATAGTATCCTTATCGAGAACAATCGCGAGTGATATTAAGTTCTTTTTGTATCAGATATTTTAAATACAATAGGCAATGGCTACTGAAGAAGACTCCGTCGAACAAGTTGCTGCAGCACGTAAAGAGAGATTGAGAGCTCTAAGAGCTGCTCAGGAATTGTTAAATGCTCCAGATGAGAAGACTTCTGGAGGAGAGGATAAAGAGAACGGTGCTACTGCAGATACTGAAGAAGAAATGTGAGTGTATATCTTTTTCTTCCACCAAAGACAGACTCTGCTCTATAAGTTGTTTTTTTCTTTGATTTTTTTGTTTCGATTTCTGGGGTAAGTTGAATACCGATGAGATTAGATTTGATTAAATTTTGAATGTTATTCTTCTATCCATGGATCACTTCTAAGCACATTTGTAACATTAAGGTAGGTTCAATTTGACTTCTCTAACTTTAATATCCTCTCTCAACTCTATTCGACTCTATTCTCATTTAGTTGCGCTTTTAAAGATATTGCCTATGATATCATTTCTAAATGTAGAATTGTAAACTATAATTATACTCATATACGACCTATAGATTCGTAGCTTCATGAATAAACAAACGTGAATAGATTAGAAAGATATCAATCGGGAAAGTTCATGCTCAATAAACCATTAAATTAATATTCCATTTAAAAATACTTAATTGCTCGTATCTCCTGGAAACTGAAACTCCACTAAATTAATATTCCATTGAAAGTAGAACTATGTCGGAGATGAAGAGGAAAAAAGAATAGATTTCATGATACTCCTGTCCTGAATGTTTGTCTCCTTCTCTTAGGAATGATGATGATGTCCTTCTTCCTCTGCCTCTAGCTACCTTCTTTTATCTTTGTAGCTACTGCCTGACCTTTTCCCTCCAACTTAACTATTGCTCTCTCTCATTTTCTCTTCCTCTTCCTTTAGCCATCCCTTTTATCTTTGTATCTATCGTCTGACTTTTCCCCCTTTTTTCTTATTTTTTTTTGTGCATGTTGAGATTACATGATGCCATAGTGAGCTAAGTTCTCTAGAATCTGGCTTGGAGCATGTTACAGACGGCTGCTGTATGCTGTGGCTAGTGAACTTTGTTTATGATGTATTAAAAGTGCCTGCCTTGGCAGTAGTGCCTGCATTGTCGTGGCAGTTCAAACAAAAGTTTTCTTCCTTTCCTTTGTTAGTTGCATCTATCTGTTTACAGAATGGAATCATAAGGCCACAAAAAATCCAAATAGTGCAGAAGACTAGCCAAATATTTGATAAAATAGTATTTGAAACTAACTTGTAAAGTCTTTGTAAACATGATGCATATGAAACATGCTCATGTAAGTGTCCTCTCACTAATGAGATGTTTCTTTTGTTTTCTTTCTTTGCTCTCTTTTTCTTTTTTCCTTTCTAGTTCTTAATAATATTTGGCTTGAAGAGTTTGGGATGACGATGAATGGATGGCAATGATGGTGACATATAACTTAACTGCTATTTATTTTTGGGGATATGTTTTCATGTTCAACTTCAAAAGTGTTTCAATAGATTTTGTCCCTTGCAATGGGAACATTGTGAATATAATCACATTCTGTTGTTTATTTGAATATATGTTTTGTTTGTTGTTATTGTCAACTCATTTGAAAAGTTGATGTACACAGTTACTATGCAGCATGTTAAATAGCTCTTCCCTCATTTAATAAGTGCAATATACGGACATGAGCTCATTAGTTTTGTTATTGGATTAGTTCTTGATTCTCTAATAAATTGTCCTTTTGCAGTAATCTTAGTATGAAATTTCGGAACTATGTTCCACATGATAAGGAGCTTCAGGAGGGTAAGCTTGCCCCACCTGTATTGCCGAAGTTCGAGGACCCTGTTGCTACTGAACCTCCACAATTAAAAGAGGTAGTTTTGTCAGTTACTCTATGATATGTTTTTAAACTGGTCTGTGCTCGTATTTTGTGGATCTTTTTCTATTAATTATATTCTATTGAAAAAATTTTAGGACCCATTTGTAAATATTGCTCCTAAGAAACCAAACTGGGACCTGAGAAGGGATGTGCAGAAGAAGCTTGATAAGCTTGAAAGACGTACTCAGAAAGCATTATATAAGCTTATGGGTAAGTAGTAATATTGAATTAAGGTTTACTTGAACTTGTTGATAAATCATTATTTTATTCTAGTTCTTTTACTTCTTGCTTCATTTGTTAGTGTAACAAAGTATTTAGCGAATTGAATTGGTTTGCTCTGAGAAAATATCTATGTAGTCAATTAGCATAAACATAAAATCGTTTTTGTTTTTACTGGTCCTGTTTTGGGGTCAAATGTATTCTTTTTCCATGCACCACGGCATTTATGACCAACTAGGAGATGTTGATTATCATTTAGCAAGCAATTGTGTTCTCAAGTCAACATGCCTGCTGAAATATGTTAGGCCACCAATCAAAAACGTATATGTTAGGAAAAATAAATGGGGTGGAAAGAAGATAATTGTTGGAGAAAACAACAATTAATAGGGCTGGCTGTTAGTATTCTGTTCTTGTCTATTTTTGGGCTGTATTAATAGGAGCGTAATCCTATGTCTAGTATTTTGAAGTCTTGGGTATGTTAAGAGTCAACTGGTCATAATAACTCAGATAAGGAATAGTCTATTTAATGGAAGTCTAGGAGAAGTCCAGGGTATCGAGAAGTTGTTGTAAGACCTTAGTCTTGGAGAGAAATCAGCCCTCTCGAATTGGTTGATAATCAGTAAAGCAATATTCTATCCTATCCTCTGTTTTTCTTTTATTTTGTAAGGGAAACCTTACAAAATATTGACTGCAACTTTTATCTCTAACCTTTTTCAATCTACCATGTCCCTGCATACACCGATTAAAAACCATTTCATGAAATTAATAATGTAGTTGGAGTTGATTTGATTCTGTTTGGATAATTGAGATTGATTTGGTCGTCAGTTGTGGATTTAGGATTTAACATTCTTCAATCTTGAAATTTGAACTTGCTGGGCATTTAAAATTTGGGGGATTTCTAGGTATCAAGGCTTGTGGAGCATGAAGGAGAATGGAGCCAGATTAAACCATAACCCTCACTGATAAACTCGTGAAGATGTTGAAAGTAATAGAAATGTTCATGACATCTTTTCTTCCATTTGGAGATTTATTTATTTTTAAAGGACATCACGAATACAAATATAAGGTCAGGATTTGAACTCATAATCCGGATCTTTAACCCACTGAGTTTTGTTCAAGTTGGTATTATTAGCTAGCCAGTGTTCATTGGCAGTTACAAGAGTGATTATTATCTGTATCATAAAACCGTAGAAAATTATGTGAAACTCTGAAATTACAGAGTGTTTGCACATTCAGAGCACCCTGCTTACTTGCCCTGAACTTTATTCTTTGTTCAATTTTTTTGTAGAGGAACAGGAAAAGCAAAAGCAGTCAGCTGAAGGAGACGATGATCAAAATGGTACGGAGGAATAGTATGCCACACAAGTTATGAGTTCTCAAATATTACAGTTGTGTAATATTCGCGACTACTCCGACATCAAACCATGCTTTGAGAAATTTGTCCCTGAAGAAAAATGGGCGTTGATGGCTCATATGGTCAGTTTTTCTGTGACCTTTCTGATCATTTTTGGCTGAAAATCTTTAGTTCATCTATTGTAGCTCATGGTGTCTCTTGACTAATTACACCCCATAGTGTATCTCAGACTAGATAGTGAGTGATTTGTAATCTACCTATACTACCTTTAAATAACTTTATATTGCACTACATGTTTATCTTCATTATGAACCCTTTTTTTCCTTTTTATCTGCAAGTTTTAAT

mRNA sequence

CACTAACCCAAGCGCTCTCTCTTCCTCCATCTCCTTCGTCGAAACCCCCCTCCCCCTTTGGCCGTGTAGTCCAGCCGCCGCCGGAGGTCGAAGCGCCGCCGCCCGTTTCTGTCGACTGCAGCAGCGCCGCCGGCCGTCCAGCTCCGTGGGTCGCGCATCTCTCTCCCTCTCTTGCGATCTTTCTCTCTCCGTGGGTGTCTTAGTGGCCTCGTTTCTCTCTCTCTCGTGTTGCCGTGAACCCGTCCAGCCACTGCCGCATAAACGCGCCCCGCCGCCGCTATCTGCAGCAGGTGTGTCGCCGCCGTCCGTGGGTCGTAGCCCGAGCGCCGCCGCCCAGCGTCCATCGCGTTATCTCTCTTCCCCGTGCCGTCTTTGTGGGTTTTTTCGCCGAGAAGTGAAAAACCCGTGATCTCGTGCGGCCAGCATCTTGGAGTTCTTTCTCTCGCGTTTTCACCTCTGTCCAGCGACATTCTTGGGCATTTTCGGCACCGTCGAGCGATTCTGTGATCGATTGGGTTCGAATCGCTGTAAGCTTGAATACCCACTGCCTTAGGATCTTTTGGTGACCTATCCGGGATTAGTAAGACCTGTCTCGGCGTGGTTTCGGGTCTGTTTGGATATTTTAAATACAATAGGCAATGGCTACTGAAGAAGACTCCGTCGAACAAGTTGCTGCAGCACGTAAAGAGAGATTGAGAGCTCTAAGAGCTGCTCAGGAATTGTTAAATGCTCCAGATGAGAAGACTTCTGGAGGAGAGGATAAAGAGAACGGTGCTACTGCAGATACTGAAGAAGAAATTAATCTTAGTATGAAATTTCGGAACTATGTTCCACATGATAAGGAGCTTCAGGAGGGTAAGCTTGCCCCACCTGTATTGCCGAAGTTCGAGGACCCTGTTGCTACTGAACCTCCACAATTAAAAGAGGACCCATTTGTAAATATTGCTCCTAAGAAACCAAACTGGGACCTGAGAAGGGATGTGCAGAAGAAGCTTGATAAGCTTGAAAGACGTACTCAGAAAGCATTATATAAGCTTATGGAGGAACAGGAAAAGCAAAAGCAGTCAGCTGAAGGAGACGATGATCAAAATGGTACGGAGGAATAGTATGCCACACAAGTTATGAGTTCTCAAATATTACAGTTGTGTAATATTCGCGACTACTCCGACATCAAACCATGCTTTGAGAAATTTGTCCCTGAAGAAAAATGGGCGTTGATGGCTCATATGGTCAGTTTTTCTGTGACCTTTCTGATCATTTTTGGCTGAAAATCTTTAGTTCATCTATTGTAGCTCATGGTGTCTCTTGACTAATTACACCCCATAGTGTATCTCAGACTAGATAGTGAGTGATTTGTAATCTACCTATACTACCTTTAAATAACTTTATATTGCACTACATGTTTATCTTCATTATGAACCCTTTTTTTCCTTTTTATCTGCAAGTTTTAAT

Coding sequence (CDS)

ATGGCTACTGAAGAAGACTCCGTCGAACAAGTTGCTGCAGCACGTAAAGAGAGATTGAGAGCTCTAAGAGCTGCTCAGGAATTGTTAAATGCTCCAGATGAGAAGACTTCTGGAGGAGAGGATAAAGAGAACGGTGCTACTGCAGATACTGAAGAAGAAATTAATCTTAGTATGAAATTTCGGAACTATGTTCCACATGATAAGGAGCTTCAGGAGGGTAAGCTTGCCCCACCTGTATTGCCGAAGTTCGAGGACCCTGTTGCTACTGAACCTCCACAATTAAAAGAGGACCCATTTGTAAATATTGCTCCTAAGAAACCAAACTGGGACCTGAGAAGGGATGTGCAGAAGAAGCTTGATAAGCTTGAAAGACGTACTCAGAAAGCATTATATAAGCTTATGGAGGAACAGGAAAAGCAAAAGCAGTCAGCTGAAGGAGACGATGATCAAAATGGTACGGAGGAATAG

Protein sequence

MATEEDSVEQVAAARKERLRALRAAQELLNAPDEKTSGGEDKENGATADTEEEINLSMKFRNYVPHDKELQEGKLAPPVLPKFEDPVATEPPQLKEDPFVNIAPKKPNWDLRRDVQKKLDKLERRTQKALYKLMEEQEKQKQSAEGDDDQNGTEE
Homology
[Close]
BLAST of Lcy05g013720 vs. ExPASy Swiss-Prot
Match: Q8R344 (Coiled-coil domain-containing protein 12 OS=Mus musculus OX=10090 GN=Ccdc12 PE=1 SV=2)

HSP 1 Score: 72.4 bits (176), Expect = 5.1e-12
Identity = 57/150 (38.00%), Postives = 90/150 (60.00%), Query Frame = 0 

Query: 8   VEQVAAARKERLRALRAAQELLNAPDEKTSGGEDKENGATADTE-----EEI--NLSMKF 67
           +E+ A  RKERL+ALR          EKT G +D+E+G     +     EE+  +  ++ 
Sbjct: 11  LEEEALRRKERLKALR----------EKT-GRKDREDGEPQTKQLREEGEEVGKHRGLRL 70

Query: 68  RNYVPHDKELQEGKL--APPVL----PKFEDPVATEPPQLKEDPFVNIAPKKPNWDLRRD 127
           RNYVP D++L+  ++  A PV      K +   A   P ++E    N+AP+KP+WDL+RD
Sbjct: 71  RNYVPEDEDLKRRRVPQAKPVAVEEKVKEQLEAAKPEPVIEEVDLANLAPRKPDWDLKRD 130

Query: 128 VQKKLDKLERRTQKALYKLMEEQEKQKQSA 145
           V KKL+KLE+RTQ+A+ +L+ E+ K ++ +
Sbjct: 131 VAKKLEKLEKRTQRAIAELIRERLKGQEDS 149

[Close]
BLAST of Lcy05g013720 vs. ExPASy Swiss-Prot
Match: Q8WUD4 (Coiled-coil domain-containing protein 12 OS=Homo sapiens OX=9606 GN=CCDC12 PE=1 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 1.9e-11
Identity = 59/161 (36.65%), Postives = 93/161 (57.76%), Query Frame = 0 

Query: 8   VEQVAAARKERLRALRAAQELLNAPDEKTSGGEDKENG-------ATADTEEEINLSMKF 67
           +E+ A  RKERL+ALR          EKT G +DKE+G          + E E +  ++ 
Sbjct: 11  LEEEALRRKERLKALR----------EKT-GRKDKEDGEPKTKHLREEEEEGEKHRELRL 70

Query: 68  RNYVPHDKELQEGKL--APPVL----PKFEDPVATEPPQLKEDPFVNIAPKKPNWDLRRD 127
           RNYVP D++L++ ++  A PV      K +   A   P ++E    N+AP+KP+WDL+RD
Sbjct: 71  RNYVPEDEDLKKRRVPQAKPVAVEEKVKEQLEAAKPEPVIEEVDLANLAPRKPDWDLKRD 130

Query: 128 VQKKLDKLERRTQKALYKLMEEQEKQKQSAEGDDDQNGTEE 156
           V KKL+KL++RTQ+A+ +L+ E+ K ++ +        TE+
Sbjct: 131 VAKKLEKLKKRTQRAIAELIRERLKGQEDSLASAVDAATEQ 160

[Close]
BLAST of Lcy05g013720 vs. ExPASy Swiss-Prot
Match: Q9UU80 (Pre-mRNA-splicing factor cwf18 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=cwf18 PE=1 SV=1)

HSP 1 Score: 45.1 bits (105), Expect = 8.6e-04
Identity = 37/137 (27.01%), Postives = 67/137 (48.91%), Query Frame = 0 

Query: 7   SVEQVAAARKERLRALRAAQELLNAPDEKTSGGEDKENGATADTEEEINLSMKFRNYVPH 66
           S+++VA +RK+RL  LR  ++L N                T D++E     ++ RNY P 
Sbjct: 3   SLDEVAESRKQRLAELRKIKQLEN---------------KTRDSQEVQKNVIEHRNYDPE 62

Query: 67  DKELQEGKLAPPVLPKFEDPVATEPPQ-------------LKEDPFVNIAPKKPNWDLRR 126
            +  + G + PP + +  + ++ E  +             ++E   V + PKKP WDL R
Sbjct: 63  VQAPKMGFVEPPNMIESVEALSKEIEEKTKRKIEEQSSVPVEELDLVTLRPKKPTWDLER 122

Query: 127 DVQKKLDKLERRTQKAL 131
           D+++++  LE + Q A+
Sbjct: 123 DLKERMRSLETQNQNAI 124

[Close]
BLAST of Lcy05g013720 vs. ExPASy TrEMBL
Match: A0A6J1GST8 (coiled-coil domain-containing protein 12-like OS=Cucurbita moschata OX=3662 GN=LOC111457177 PE=4 SV=1)

HSP 1 Score: 274.6 bits (701), Expect = 2.5e-70
Identity = 148/154 (96.10%), Postives = 150/154 (97.40%), Query Frame = 0 

Query: 1   MATEEDSVEQVAAARKERLRALRAAQELLNAPDEKTSGGEDKENGATADTEEEINLSMKF 60
           MATEEDSVEQVAAAR+ERLRALRAAQELLNAPDEKTSGGED+ENGA ADT EEINL MKF
Sbjct: 1   MATEEDSVEQVAAARQERLRALRAAQELLNAPDEKTSGGEDQENGAAADT-EEINLGMKF 60

Query: 61  RNYVPHDKELQEGKLAPPVLPKFEDPVATEPPQLKEDPFVNIAPKKPNWDLRRDVQKKLD 120
           RNYVPHDKELQEGKLAPPVLPKFEDPVATEPPQLKEDPFVNIAPKKPNWDLRRDVQKKLD
Sbjct: 61  RNYVPHDKELQEGKLAPPVLPKFEDPVATEPPQLKEDPFVNIAPKKPNWDLRRDVQKKLD 120

Query: 121 KLERRTQKALYKLMEEQEKQKQSAEGDDDQNGTE 155
           KLERRTQKALYKLMEEQEKQKQSAEGDDDQN TE
Sbjct: 121 KLERRTQKALYKLMEEQEKQKQSAEGDDDQNDTE 153

[Close]
BLAST of Lcy05g013720 vs. ExPASy TrEMBL
Match: A0A6J1JYP1 (coiled-coil domain-containing protein 12-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111490058 PE=4 SV=1)

HSP 1 Score: 272.3 bits (695), Expect = 1.2e-69
Identity = 146/154 (94.81%), Postives = 148/154 (96.10%), Query Frame = 0 

Query: 1   MATEEDSVEQVAAARKERLRALRAAQELLNAPDEKTSGGEDKENGATADTEEEINLSMKF 60
           MATEEDSVEQVAAAR+ERLRALR AQELLNAPDEKTSGGED+ENG  ADT EE NL MKF
Sbjct: 1   MATEEDSVEQVAAARQERLRALRTAQELLNAPDEKTSGGEDQENGTAADT-EETNLGMKF 60

Query: 61  RNYVPHDKELQEGKLAPPVLPKFEDPVATEPPQLKEDPFVNIAPKKPNWDLRRDVQKKLD 120
           RNYVPHDKELQEGKLAPPVLPKFEDPVATEPPQLKEDPFVNIAPKKPNWDLRRDVQKKLD
Sbjct: 61  RNYVPHDKELQEGKLAPPVLPKFEDPVATEPPQLKEDPFVNIAPKKPNWDLRRDVQKKLD 120

Query: 121 KLERRTQKALYKLMEEQEKQKQSAEGDDDQNGTE 155
           KLERRTQKALYKLMEEQEKQKQSAEGDDDQNGTE
Sbjct: 121 KLERRTQKALYKLMEEQEKQKQSAEGDDDQNGTE 153

[Close]
BLAST of Lcy05g013720 vs. ExPASy TrEMBL
Match: A0A6J1DLK0 (coiled-coil domain-containing protein 12 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111022269 PE=4 SV=1)

HSP 1 Score: 265.4 bits (677), Expect = 1.5e-67
Identity = 143/154 (92.86%), Postives = 146/154 (94.81%), Query Frame = 0 

Query: 1   MATEEDSVEQVAAARKERLRALRAAQELLNAPDEKTSGGEDKENGATADTEEEINLSMKF 60
           MATEEDSVEQVAAARKERLRALRAAQELLN PDEKTSGGEDK+NG   DT EE NLSMKF
Sbjct: 1   MATEEDSVEQVAAARKERLRALRAAQELLNTPDEKTSGGEDKDNGVIEDT-EETNLSMKF 60

Query: 61  RNYVPHDKELQEGKLAPPVLPKFEDPVATEPPQLKEDPFVNIAPKKPNWDLRRDVQKKLD 120
           RNYVPHDKELQEGKLAPPVLPKFEDPVA EPPQLKEDPFVNIAPKKPNWDLRRDVQKKLD
Sbjct: 61  RNYVPHDKELQEGKLAPPVLPKFEDPVANEPPQLKEDPFVNIAPKKPNWDLRRDVQKKLD 120

Query: 121 KLERRTQKALYKLMEEQEKQKQSAEGDDDQNGTE 155
           KLERRTQKALYKLM+EQEKQK+SAEGDD QNGTE
Sbjct: 121 KLERRTQKALYKLMKEQEKQKESAEGDDVQNGTE 153

[Close]
BLAST of Lcy05g013720 vs. ExPASy TrEMBL
Match: A0A6J1E719 (coiled-coil domain-containing protein 12-like OS=Cucurbita moschata OX=3662 GN=LOC111431306 PE=4 SV=1)

HSP 1 Score: 265.0 bits (676), Expect = 2.0e-67
Identity = 145/156 (92.95%), Postives = 146/156 (93.59%), Query Frame = 0 

Query: 1   MATEEDSVEQVAAARKERLRALRAAQELLNAPDEKTSGGEDKENGATADTE--EEINLSM 60
           MATE+DSVEQVAAARKERLRALRAAQELLNA DEK SGGEDKENGAT D E  EE NLSM
Sbjct: 1   MATEDDSVEQVAAARKERLRALRAAQELLNASDEKNSGGEDKENGATEDPEDPEETNLSM 60

Query: 61  KFRNYVPHDKELQEGKLAPPVLPKFEDPVATEPPQLKEDPFVNIAPKKPNWDLRRDVQKK 120
           KFRNYVPHDKELQEGKL PP LPKFEDPVATEPPQLKEDPFVNIAPKKPNWDLRRDVQKK
Sbjct: 61  KFRNYVPHDKELQEGKLVPPELPKFEDPVATEPPQLKEDPFVNIAPKKPNWDLRRDVQKK 120

Query: 121 LDKLERRTQKALYKLMEEQEKQKQSAEGDDDQNGTE 155
           LDKLERRTQKALYKLMEEQEKQKQSAEGDDDQN TE
Sbjct: 121 LDKLERRTQKALYKLMEEQEKQKQSAEGDDDQNITE 156

[Close]
BLAST of Lcy05g013720 vs. ExPASy TrEMBL
Match: A0A1S3ATB1 (coiled-coil domain-containing protein 12 OS=Cucumis melo OX=3656 GN=LOC103482658 PE=4 SV=1)

HSP 1 Score: 261.2 bits (666), Expect = 2.8e-66
Identity = 141/154 (91.56%), Postives = 145/154 (94.16%), Query Frame = 0 

Query: 1   MATEEDSVEQVAAARKERLRALRAAQELLNAPDEKTSGGEDKENGATADTEEEINLSMKF 60
           MATEEDS EQVAAARKERL+ALRAAQELLNA DEK S GEDKENGATADT +E NL+MKF
Sbjct: 1   MATEEDSFEQVAAARKERLKALRAAQELLNASDEKNSVGEDKENGATADT-DETNLNMKF 60

Query: 61  RNYVPHDKELQEGKLAPPVLPKFEDPVATEPPQLKEDPFVNIAPKKPNWDLRRDVQKKLD 120
           RNYVPHDKELQEGKLAPPVLPKFEDPV TEPPQ KEDPFVNIAPKKPNWDLRRDVQKKLD
Sbjct: 61  RNYVPHDKELQEGKLAPPVLPKFEDPVTTEPPQQKEDPFVNIAPKKPNWDLRRDVQKKLD 120

Query: 121 KLERRTQKALYKLMEEQEKQKQSAEGDDDQNGTE 155
           KLERRTQKALYKLMEEQEKQKQ+AEGDDDQNG E
Sbjct: 121 KLERRTQKALYKLMEEQEKQKQAAEGDDDQNGAE 153

[Close]
BLAST of Lcy05g013720 vs. NCBI nr
Match: XP_022955111.1 (coiled-coil domain-containing protein 12-like [Cucurbita moschata] >XP_022955112.1 coiled-coil domain-containing protein 12-like [Cucurbita moschata] >XP_022955113.1 coiled-coil domain-containing protein 12-like [Cucurbita moschata] >XP_022955114.1 coiled-coil domain-containing protein 12-like [Cucurbita moschata])

HSP 1 Score: 274.6 bits (701), Expect = 5.1e-70
Identity = 148/154 (96.10%), Postives = 150/154 (97.40%), Query Frame = 0 

Query: 1   MATEEDSVEQVAAARKERLRALRAAQELLNAPDEKTSGGEDKENGATADTEEEINLSMKF 60
           MATEEDSVEQVAAAR+ERLRALRAAQELLNAPDEKTSGGED+ENGA ADT EEINL MKF
Sbjct: 1   MATEEDSVEQVAAARQERLRALRAAQELLNAPDEKTSGGEDQENGAAADT-EEINLGMKF 60

Query: 61  RNYVPHDKELQEGKLAPPVLPKFEDPVATEPPQLKEDPFVNIAPKKPNWDLRRDVQKKLD 120
           RNYVPHDKELQEGKLAPPVLPKFEDPVATEPPQLKEDPFVNIAPKKPNWDLRRDVQKKLD
Sbjct: 61  RNYVPHDKELQEGKLAPPVLPKFEDPVATEPPQLKEDPFVNIAPKKPNWDLRRDVQKKLD 120

Query: 121 KLERRTQKALYKLMEEQEKQKQSAEGDDDQNGTE 155
           KLERRTQKALYKLMEEQEKQKQSAEGDDDQN TE
Sbjct: 121 KLERRTQKALYKLMEEQEKQKQSAEGDDDQNDTE 153

[Close]
BLAST of Lcy05g013720 vs. NCBI nr
Match: KAG6572999.1 (Coiled-coil domain-containing protein 12, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 274.6 bits (701), Expect = 5.1e-70
Identity = 148/154 (96.10%), Postives = 150/154 (97.40%), Query Frame = 0 

Query: 1   MATEEDSVEQVAAARKERLRALRAAQELLNAPDEKTSGGEDKENGATADTEEEINLSMKF 60
           MATEEDSVEQVAAAR+ERLRALRAAQELLNAPDEKTSGGED+ENGA ADT EEINL MKF
Sbjct: 1   MATEEDSVEQVAAARQERLRALRAAQELLNAPDEKTSGGEDQENGAAADT-EEINLGMKF 60

Query: 61  RNYVPHDKELQEGKLAPPVLPKFEDPVATEPPQLKEDPFVNIAPKKPNWDLRRDVQKKLD 120
           RNYVPHDKELQEGKLAPPVLPKFEDPVATEPPQLKEDPFVNIAPKKPNWDLRRDVQKKLD
Sbjct: 61  RNYVPHDKELQEGKLAPPVLPKFEDPVATEPPQLKEDPFVNIAPKKPNWDLRRDVQKKLD 120

Query: 121 KLERRTQKALYKLMEEQEKQKQSAEGDDDQNGTE 155
           KLERRTQKALYKLMEEQEKQKQSAEGDDDQN TE
Sbjct: 121 KLERRTQKALYKLMEEQEKQKQSAEGDDDQNDTE 153

[Close]
BLAST of Lcy05g013720 vs. NCBI nr
Match: XP_023542240.1 (coiled-coil domain-containing protein 12-like [Cucurbita pepo subsp. pepo] >XP_023542241.1 coiled-coil domain-containing protein 12-like [Cucurbita pepo subsp. pepo] >XP_023542242.1 coiled-coil domain-containing protein 12-like [Cucurbita pepo subsp. pepo] >XP_023542243.1 coiled-coil domain-containing protein 12-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 274.2 bits (700), Expect = 6.7e-70
Identity = 148/154 (96.10%), Postives = 149/154 (96.75%), Query Frame = 0 

Query: 1   MATEEDSVEQVAAARKERLRALRAAQELLNAPDEKTSGGEDKENGATADTEEEINLSMKF 60
           MATEEDSVEQVAAAR+ERLRALRAAQELLNAPDEKTSGGEDKENGA ADT EE NL MKF
Sbjct: 1   MATEEDSVEQVAAARQERLRALRAAQELLNAPDEKTSGGEDKENGAAADT-EETNLGMKF 60

Query: 61  RNYVPHDKELQEGKLAPPVLPKFEDPVATEPPQLKEDPFVNIAPKKPNWDLRRDVQKKLD 120
           RNYVPHDKELQEGKLAPPVLPKFEDPVATEPPQLKEDPFVNIAPKKPNWDLRRDVQKKLD
Sbjct: 61  RNYVPHDKELQEGKLAPPVLPKFEDPVATEPPQLKEDPFVNIAPKKPNWDLRRDVQKKLD 120

Query: 121 KLERRTQKALYKLMEEQEKQKQSAEGDDDQNGTE 155
           KLERRTQKALYKLMEEQEKQKQSAEGDDDQN TE
Sbjct: 121 KLERRTQKALYKLMEEQEKQKQSAEGDDDQNDTE 153

[Close]
BLAST of Lcy05g013720 vs. NCBI nr
Match: XP_022994277.1 (coiled-coil domain-containing protein 12-like isoform X1 [Cucurbita maxima] >XP_022994278.1 coiled-coil domain-containing protein 12-like isoform X2 [Cucurbita maxima] >XP_022994279.1 coiled-coil domain-containing protein 12-like isoform X1 [Cucurbita maxima] >XP_022994280.1 coiled-coil domain-containing protein 12-like isoform X1 [Cucurbita maxima] >XP_022994281.1 coiled-coil domain-containing protein 12-like isoform X2 [Cucurbita maxima] >XP_022994282.1 coiled-coil domain-containing protein 12-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 272.3 bits (695), Expect = 2.5e-69
Identity = 146/154 (94.81%), Postives = 148/154 (96.10%), Query Frame = 0 

Query: 1   MATEEDSVEQVAAARKERLRALRAAQELLNAPDEKTSGGEDKENGATADTEEEINLSMKF 60
           MATEEDSVEQVAAAR+ERLRALR AQELLNAPDEKTSGGED+ENG  ADT EE NL MKF
Sbjct: 1   MATEEDSVEQVAAARQERLRALRTAQELLNAPDEKTSGGEDQENGTAADT-EETNLGMKF 60

Query: 61  RNYVPHDKELQEGKLAPPVLPKFEDPVATEPPQLKEDPFVNIAPKKPNWDLRRDVQKKLD 120
           RNYVPHDKELQEGKLAPPVLPKFEDPVATEPPQLKEDPFVNIAPKKPNWDLRRDVQKKLD
Sbjct: 61  RNYVPHDKELQEGKLAPPVLPKFEDPVATEPPQLKEDPFVNIAPKKPNWDLRRDVQKKLD 120

Query: 121 KLERRTQKALYKLMEEQEKQKQSAEGDDDQNGTE 155
           KLERRTQKALYKLMEEQEKQKQSAEGDDDQNGTE
Sbjct: 121 KLERRTQKALYKLMEEQEKQKQSAEGDDDQNGTE 153

[Close]
BLAST of Lcy05g013720 vs. NCBI nr
Match: XP_038894163.1 (coiled-coil domain-containing protein 12 [Benincasa hispida])

HSP 1 Score: 267.3 bits (682), Expect = 8.2e-68
Identity = 145/154 (94.16%), Postives = 146/154 (94.81%), Query Frame = 0 

Query: 1   MATEEDSVEQVAAARKERLRALRAAQELLNAPDEKTSGGEDKENGATADTEEEINLSMKF 60
           MATEEDSVEQVAAARKERLRALRAAQELLNA DEK SGGEDKENGATAD  EE NL+MKF
Sbjct: 1   MATEEDSVEQVAAARKERLRALRAAQELLNASDEKNSGGEDKENGATADA-EETNLNMKF 60

Query: 61  RNYVPHDKELQEGKLAPPVLPKFEDPVATEPPQLKEDPFVNIAPKKPNWDLRRDVQKKLD 120
           RNYVPHDKELQEGKLAPPVLPKFEDPV TEP QLKEDPFVNIAPKKPNWDLRRDVQKKLD
Sbjct: 61  RNYVPHDKELQEGKLAPPVLPKFEDPVTTEPAQLKEDPFVNIAPKKPNWDLRRDVQKKLD 120

Query: 121 KLERRTQKALYKLMEEQEKQKQSAEGDDDQNGTE 155
           KLERRTQKALYKLMEEQEKQKQSAEGDDDQNG E
Sbjct: 121 KLERRTQKALYKLMEEQEKQKQSAEGDDDQNGAE 153

[Close]
BLAST of Lcy05g013720 vs. TAIR 10
Match: AT3G05070.1 (CONTAINS InterPro DOMAIN/s: mRNA splicing factor, Cwf18 (InterPro:IPR013169); Has 292 Blast hits to 292 proteins in 153 species: Archae - 0; Bacteria - 0; Metazoa - 118; Fungi - 83; Plants - 38; Viruses - 11; Other Eukaryotes - 42 (source: NCBI BLink). )

HSP 1 Score: 172.6 bits (436), Expect = 2.6e-43
Identity = 100/149 (67.11%), Postives = 116/149 (77.85%), Query Frame = 0 

Query: 1   MATEEDSVEQVAAARKERLRALRAAQELLNAPDEKTSGGEDKENGATADTEEEINLSMKF 60
           MA+E++S+EQ AAARKE L+ALRAAQEL           E KE+G     EE+   +MKF
Sbjct: 1   MASEDESIEQKAAARKEALKALRAAQEL----------SETKEDGEDEAVEED-GPAMKF 60

Query: 61  RNYVPHDKELQEGKLAPPVLPKFEDPVATEPP--QLKEDPFVNIAPKKPNWDLRRDVQKK 120
           RNYVP  KELQ+GKLAPP LPKFEDP+   PP  + KEDPFVNIAPKKPNWDLRRDVQKK
Sbjct: 61  RNYVPQAKELQDGKLAPPELPKFEDPIVALPPAVEKKEDPFVNIAPKKPNWDLRRDVQKK 120

Query: 121 LDKLERRTQKALYKLMEEQEKQKQSAEGD 148
           LDKLERRTQKA++KLMEEQEK+++ AE D
Sbjct: 121 LDKLERRTQKAMHKLMEEQEKEREMAEAD 138

The following BLAST results are available for this feature:
BLAST of Lcy05g013720 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q8R3445.1e-1238.00Coiled-coil domain-containing protein 12 OS=Mus musculus OX=10090 GN=Ccdc12 PE=1... [more]
Q8WUD41.9e-1136.65Coiled-coil domain-containing protein 12 OS=Homo sapiens OX=9606 GN=CCDC12 PE=1 ... [more]
Q9UU808.6e-0427.01Pre-mRNA-splicing factor cwf18 OS=Schizosaccharomyces pombe (strain 972 / ATCC 2... [more]
BLAST of Lcy05g013720 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1GST82.5e-7096.10coiled-coil domain-containing protein 12-like OS=Cucurbita moschata OX=3662 GN=L... [more]
A0A6J1JYP11.2e-6994.81coiled-coil domain-containing protein 12-like isoform X1 OS=Cucurbita maxima OX=... [more]
A0A6J1DLK01.5e-6792.86coiled-coil domain-containing protein 12 isoform X1 OS=Momordica charantia OX=36... [more]
A0A6J1E7192.0e-6792.95coiled-coil domain-containing protein 12-like OS=Cucurbita moschata OX=3662 GN=L... [more]
A0A1S3ATB12.8e-6691.56coiled-coil domain-containing protein 12 OS=Cucumis melo OX=3656 GN=LOC103482658... [more]
BLAST of Lcy05g013720 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022955111.15.1e-7096.10coiled-coil domain-containing protein 12-like [Cucurbita moschata] >XP_022955112... [more]
KAG6572999.15.1e-7096.10Coiled-coil domain-containing protein 12, partial [Cucurbita argyrosperma subsp.... [more]
XP_023542240.16.7e-7096.10coiled-coil domain-containing protein 12-like [Cucurbita pepo subsp. pepo] >XP_0... [more]
XP_022994277.12.5e-6994.81coiled-coil domain-containing protein 12-like isoform X1 [Cucurbita maxima] >XP_... [more]
XP_038894163.18.2e-6894.16coiled-coil domain-containing protein 12 [Benincasa hispida][more]
BLAST of Lcy05g013720 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G05070.12.6e-4367.11CONTAINS InterPro DOMAIN/s: mRNA splicing factor, Cwf18 (InterPro:IPR013169); Ha... [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 112..147
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 130..155
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 26..51
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 76..101
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 34..49
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 130..148
IPR013169mRNA splicing factor Cwf18-likePFAMPF08315cwf18coord: 8..136
e-value: 5.7E-35
score: 120.9
IPR013169mRNA splicing factor Cwf18-likePANTHERPTHR31551PRE-MRNA-SPLICING FACTOR CWF18coord: 1..145

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lcy05g013720.1Lcy05g013720.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0071014 post-mRNA release spliceosomal complex
cellular_component GO:0005684 U2-type spliceosomal complex