Lcy05g013170 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy05g013170
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	ATP-dependent DNA helicase
Location	Chr05: 15569458 .. 15574076 (+)
RNA-Seq Expression	Lcy05g013170
Synteny	Lcy05g013170

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAACCTGACGAGGAAGACAATCTGCAAGAAGCTCCCACTGCCCTTCAATGTCGTTCACCAATTGCTTCACAGGTATACAGGGAAAAGCAATCTCTCACACTCAAAACCAAATGAGAAAAGTCATCTTTACAGAGATAATCACACTCCCAAATGATGAACCTTACGATTTTTCCTCTCCCCCAGCTCACTCACTCAGCTCTCTCTCTTTTTCACTTACACTGAAAACAACAAATATAAGATCTATACAATTCCATCCCTAATTTCCAATTATATCATCAAAAATTGGAATCAAGGGATTCACATGAATCAAGGCTGATAGGTTGCTTACAAAACAGGACAATTGATTTGAATTTTGGATAATATCTCATTAATTTTGGAAAATTAATGTGCTCAAATCTGTCAAATAAGACACGATCTTTCTCATTAATAACATTGATTATAAAAAAAAAATTAGTTTCTTAAAATGGTCTTCCCTAAATTATGCTGCCATATTCAGAATTTATTTTCTTAATTTTTTCCCAAAGTTAATGTACTTCATTTTATGTTTTAAAATTTATTAAGTTAATGAAATTTAGCTTTGAACCAACTTATAAACTTTTTTTTTTCAAAAAAATGATTAAAAATATATATCGTACTTTAGATCGAAAAATTAAGAAAAAAAAAATGTGTTCAGTTTGTATACATAGTAATATTGAAATAAAAAACAAAAAAAAAAAAAGTTAGTATTAAGTACAATTAAATTATGTATTTTAAATGAAACAGAAGATACATAAAAAACACTCCTTTATTCTATCAAGTTGTTGGACTTGAAAATAGCTTTTTTTTTAACAAATCCTTTCCTCTTAAATATAAATAATTCAATTTCTTTTCACACAAATATTGTTTGTTTACAATAATTTCGATTTCAAATATTGTTTGAATTATGTGTATGCATATTGCAAAATCAAAAGTTTTTTTTTTTTTTTTTTTTTTTTTGAGATCAGAAAGAAAATTATACTTCACTAAAAAGTTAAAATCAATTTGTATTGTATTTGAAAAAAAATGTTTATTATGATTATTTGTTTTTTTATTCTTATTTTTAGATGTCAATTTCATAATGAAATAATTTATCTCCTAAACTTATAAAAATAATTTAAGTGAAGGTGAAGTACCTTATAAATTTGGTTTCCAAATAAAAGTTTAAAAATACACATGTTTCGTAAAATTGAAAAGTTCAAAAACAATAATAAATACTTTAAAAAATTAATAATTTTTTTTAATATTTTTTTTTACAATGCATGTATTTAGTAATATTGGAATTAAATTCGGTAAAGTTTATACACAATTTGATAACTAATAAAACTAAAACTCTACACTTCAATTATCACTTTAAATAAGATTACTAATTTATTTGCCACTTCACCTCTACTTAAATTGTTGCCTTATGTAGACCTCATATTGGTTAATATAAAGAACTTCATCGATCATTATCAATTTACTAATATGTTTAAACATAATTCATATTAAGATTAATAATCATCATTCATATATTTTTAATCAATCATTATTAATTATTATCTTATATAAATCTCATATTAGTTAATCATTATTTATATTGATTGCTTTGAAATATTTTTTATCTACATGGTTCATATTAATTAATTTGTATATATTTTGTTTACAGAATAGTATGGATGGTAATAAAAAAAGAAAGACATACTCTACACTTTCTCAAGAAGAAAGGAGAAGAACAATTGAATTCTATAGAATCAAGGAGAAAAAGACAACTTGAAGGAAATGACAAGCATCATACTAAAAGAAGAAATCCTTTTAATATGGCCACACAAAAAATGGAAAATGAAATTCAAGGTAAAGTTTTTATTTATTATATCTCAAAACTAATATATTTAAATATTACCTTTATTTATATTATTCAAATTAATATACGTCTTTTGATGTCTAATAGGATCTGAAATCCTACAACAACCATTTCACTCTCCTATACATAAGCTTAAAAAGATTAGACCCTGTACATTTTGTAAGGCAATAAAATTTGAGCACGAGACCCCAACATTTTGTTGCTTCAATGGTCAGGTACAAGTTTCTATAGACAAAATATTCTATTTAATATTGTATTTAATAGACACATTAATTATTAATTCATGATCTTTATTTATGATCTATGTACATCTTGCTGAATCTGTAGTACCTGAGAACCTTTATTATTTATTTACGCCACAATCTGAAAAGGGGGTTTTATTTCGAAAGAATATTCGAGCTTATAATAGTATGTTTTCTTTCACATCATTTGGGGTAAATTTAGATAGAGATCTAGCATCTTCGAGTAAAGGAGTTTACACATTCAGAGTACAAGGGCAAATATATCATGACCTCCCAAGTTTATTACTAGAAGATAAACCAATATTCTTCCAGCTATATTTTTATGATACCATGAATGAAATTACAAATCGCATGGAAAGATTAAGAGATGTTGAATTGGATCAAAGTCTTACAGAAAAATTGGTAGAAATCTTAAAAGTTAATCCATATGCCAAATTTTTTAGAAGCTTGAAAGATCTCCAGACAATTGAAGATGCTCATATACATATTGCTACGAATGTACAAGTTGATCAACGTATCTATAACATGCCTGGAGTAGATCAAGTAGCTGCTGTTTGGATTGAAGGAAACAATAACAACATTCCATTTAAAAGAGACATTGTGGTACATGCGCATTTTGGAAAACGACACAGAATACAACATTATTTTAGTTGTTATGATTCACTTCAATATCCTTTACTATTTCCAAATGGAGAAGCTGGCTGGCATCAAGACATCAAGAGAAATGTTAAGCAAAATCATGATGACGAATTATGCAAAGTTTCCATAGAAGGAACATCAGACATCATACAACTTGAGAGCATTGAAGATATCATGAAGAGTGAAAAACAAGGTTCGTTCGATCTATCATTACACATTAAATAACTTATATCTACTAACAAATTTTGATTAATATATTATTCATAATATAAACAATTTGTTATTCAACTTTCACAGGAATTTCAAAAGGCCGATCGTCCACAATTTCATGCAGAGAACATTACTGTTATAAGCTACAAATACGTGAATCCACTAAATCAGTATTATTTCTAGCTGGACGACTTTTCCAACAACATGTTGTTGATATGTACATAAAGCTTGAAACAACTCGACTTGATTTCTATAAAACACAACAATCACACATTTGATCCGAATTGTATCAAAGGATTGTTGATGTTGTAAATGCTGGAGAAACAAGGGGAGACAAGGTTGGAAAACGTGTTGTTCTTCCTTCAACATTTATTGGTGGTCCAAGAGATATGCGACGGCGATATTTAGATGCTATGGCCTTAGTACAACATTTTGGAAAGCCAGATCTTTTCATAACAATGACATGTAATGCCGAATGGAAAGAAATAAGAGAAGAACTAATGGAAGGCCAACTTTCTCAAGATAGACCATATCTAACTTCAAGAATTTTTAGAGGAAAGTTAATGGACCTAAAAGACCAAATTGTGCACAAAGAAATATTTGGAAAAGTTGCAGCTTTTGTATATGTTATTGAATTTCATAAACAAGGTCTTCCACACATGCATATGTTGTTCATATTGAAAAAAGATTTCAAGATCACAAATGCTGACCAGTATGACAACTATGTTAGTGCAGAAATTCCAGATAGCCAGACAAATCCTGCCCTTCACAATGCTGTTGTGAAACACATGCTCCATGGCCCATGCGGAGAAGATAACAAAAAATGTCAGTGCATGATCAATGGAAAATGTAAATTTCATTATCCAAGACAATTTTCCTCAAAAACAATGCAAGGAAAGGATGCATACCCAATATACAGGAGGAGAGACGATGGAAAACAGGTATTTATAATAATAATAGTTATTTATTGTTTTATTTTAAATTGTTTATAATATACTCCATGATAGTGATTTAGTTGCTAAATTTAGTATTTAATAGTATTTTTCTAATTAAATTAAAATTTTCTAAACTTCAAGGTAACAGTAAGAAAGAAGACTTTCGATAATCGATGGGTTGTCCCTTATAATCCATATCTACTTTTGAGATACAACTGTCACATTAATGTGGAAATATGTTCTGGATTGAAAGCAATTAAATATTTATACAAATATATTTACAAGGGACATGATCGAGCATCAGTTTATATATCACATGATGGTGATAACAAAAGTATTGATGAAATAAGGGATTATCAAGATGCTAGATGAGTTTCAGCTCAGGAAGCCTTATGGAGAATTTATGACTTTAAGCTAAATGAAATATCTCCTCCAGTGATAAACTTACAACTCCACCTTCCTAATATGCAATGTGTTTCTTATTGGGAAAATCAAAATTTGAAGAAACTCATTCATTGGGATCATATCTATAAGACAATGTTAACAGAATACTTTCATATGTGTCAAAAGTATGAAAGTGGTCGAAATTTGTTATACAAAGAGTTTCCTGAACATTATGTATGAGATAAACAACTACGAATGTGGAAGGAAAGAAAAAGAGGAGTGGTTGTGTCACGTATTGTAGGAGCAAATCCAAGAGAAGGAGAAAGATATTACTTGCGATTGTTACTAA

mRNA sequence

ATGAACCTGACGAGGAAGACAATCTGCAAGAAGCTCCCACTGCCCTTCAATGTCGTTCACCAATTGCTTCACAGGATTGTTGATGTTGTAAATGCTGGAGAAACAAGGGGAGACAAGGTTGGAAAACGTGTTGTTCTTCCTTCAACATTTATTGGTGGTCCAAGAGATATGCGACGGCGATATTTAGATGCTATGGCCTTAGTACAACATTTTGGAAAGCCAGATCTTTTCATAACAATGACATGTAATGCCGAATGGAAAGAAATAAGAGAAGAACTAATGGAAGGCCAACTTTCTCAAGATAGACCATATCTAACTTCAAGAATTTTTAGAGGAAAGTTAATGGACCTAAAAGACCAAATTGTGCACAAAGAAATATTTGGAAAAGTTGCAGCTTTTGTATATGTTATTGAATTTCATAAACAAGGTCTTCCACACATGCATATGTTGTTCATATTGAAAAAAGATTTCAAGATCACAAATGCTGACCAGTATGACAACTATGTTAGTGCAGAAATTCCAGATAGCCAGACAAATCCTGCCCTTCACAATGCTGTTGTGAAACACATGCTCCATGGCCCATGCGGAGAAGATAACAAAAAATGTCAGTGCATGATCAATGGAAAATGTAAATTTCATTATCCAAGACAATTTTCCTCAAAAACAATGCAAGGAAAGGATGCATACCCAATATACAGGAGGAGAGACGATGGAAAACAGGAGCAAATCCAAGAGAAGGAGAAAGATATTACTTGCGATTGTTACTAA

Coding sequence (CDS)

ATGAACCTGACGAGGAAGACAATCTGCAAGAAGCTCCCACTGCCCTTCAATGTCGTTCACCAATTGCTTCACAGGATTGTTGATGTTGTAAATGCTGGAGAAACAAGGGGAGACAAGGTTGGAAAACGTGTTGTTCTTCCTTCAACATTTATTGGTGGTCCAAGAGATATGCGACGGCGATATTTAGATGCTATGGCCTTAGTACAACATTTTGGAAAGCCAGATCTTTTCATAACAATGACATGTAATGCCGAATGGAAAGAAATAAGAGAAGAACTAATGGAAGGCCAACTTTCTCAAGATAGACCATATCTAACTTCAAGAATTTTTAGAGGAAAGTTAATGGACCTAAAAGACCAAATTGTGCACAAAGAAATATTTGGAAAAGTTGCAGCTTTTGTATATGTTATTGAATTTCATAAACAAGGTCTTCCACACATGCATATGTTGTTCATATTGAAAAAAGATTTCAAGATCACAAATGCTGACCAGTATGACAACTATGTTAGTGCAGAAATTCCAGATAGCCAGACAAATCCTGCCCTTCACAATGCTGTTGTGAAACACATGCTCCATGGCCCATGCGGAGAAGATAACAAAAAATGTCAGTGCATGATCAATGGAAAATGTAAATTTCATTATCCAAGACAATTTTCCTCAAAAACAATGCAAGGAAAGGATGCATACCCAATATACAGGAGGAGAGACGATGGAAAACAGGAGCAAATCCAAGAGAAGGAGAAAGATATTACTTGCGATTGTTACTAA

Protein sequence

MNLTRKTICKKLPLPFNVVHQLLHRIVDVVNAGETRGDKVGKRVVLPSTFIGGPRDMRRRYLDAMALVQHFGKPDLFITMTCNAEWKEIREELMEGQLSQDRPYLTSRIFRGKLMDLKDQIVHKEIFGKVAAFVYVIEFHKQGLPHMHMLFILKKDFKITNADQYDNYVSAEIPDSQTNPALHNAVVKHMLHGPCGEDNKKCQCMINGKCKFHYPRQFSSKTMQGKDAYPIYRRRDDGKQEQIQEKEKDITCDCY

Homology

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BLAST of Lcy05g013170 vs. ExPASy TrEMBL
Match: A0A5B7A9C3 (ATP-dependent DNA helicase OS=Davidia involucrata OX=16924 GN=Din_021512 PE=3 SV=1)

HSP 1 Score: 331.3 bits (848), Expect = 3.7e-87
Identity = 155/233 (66.52%), Postives = 185/233 (79.40%), Query Frame = 0


Query: 17  NVVHQLLHRIVDVVNAGETRGDKVGKRVVLPSTFIGGPRDMRRRYLDAMALVQHFGKPDL 76
           N+   L   IVD V AGETRG++VG+R+VLP++F+GGPRDMRRRYLDA+ALVQ FGKPDL
Sbjct: 452 NIRADLYQGIVDSVMAGETRGNQVGQRIVLPASFVGGPRDMRRRYLDAIALVQRFGKPDL 511

Query: 77  FITMTCNAEWKEIREELMEGQLSQDRPYLTSRIFRGKLMDLKDQIVHKEIFGKVAAFVYV 136
           FITMTCN +WKE+++EL EGQ  QDRP LTSR+FR KL DLKDQ+  K IFGKVAA VYV
Sbjct: 512 FITMTCNPDWKEVQDELQEGQRPQDRPDLTSRVFRAKLQDLKDQLFKKAIFGKVAAHVYV 571

Query: 137 IEFHKQGLPHMHMLFILKKDFKITNADQYDNYVSAEIPDSQTNPALHNAVVKHMLHGPCG 196
           IEF K+GLPH HML ILK ++KITNADQYD +V AE+PD    P L+  VVKHM+HGPCG
Sbjct: 572 IEFQKRGLPHAHMLIILKSEYKITNADQYDKFVCAELPDKGKYPQLYEMVVKHMMHGPCG 631

Query: 197 EDNKKCQCMINGKCKFHYPRQFSSKTMQGKDAYPIYRRRDDGKQEQIQEKEKD 250
           E N K  CM+NG+CK HYPR F  KT+QGKD YPIYRRRD+ ++  ++  E D
Sbjct: 632 EKNPKNPCMVNGECKNHYPRSFCEKTIQGKDGYPIYRRRDNKEKVTVRNAELD 684

[Close]

BLAST of Lcy05g013170 vs. ExPASy TrEMBL
Match: A0A6P5G2W9 (ATP-dependent DNA helicase OS=Ananas comosus OX=4615 GN=LOC109718258 PE=3 SV=1)

HSP 1 Score: 316.2 bits (809), Expect = 1.2e-82
Identity = 149/223 (66.82%), Postives = 178/223 (79.82%), Query Frame = 0


Query: 22  LLHRIVDVVNAGETRGDKVGKRVVLPSTFIGGPRDMRRRYLDAMALVQHFGKPDLFITMT 81
           L   IVD V +GE RG+ +GKR+VLPS+FIGGPRDMRRRYLDAMALVQ +GKPD+F+TMT
Sbjct: 471 LYQGIVDSVASGELRGNMIGKRIVLPSSFIGGPRDMRRRYLDAMALVQKYGKPDIFLTMT 530

Query: 82  CNAEWKEIREELMEGQLSQDRPYLTSRIFRGKLMDLKDQIVHKEIFGKVAAFVYVIEFHK 141
           CN +W+EIR EL  GQL+QDRP LTSRIFR KL DLKDQ+  K IFG+VAA V+VIEF K
Sbjct: 531 CNPDWEEIRSELEPGQLAQDRPDLTSRIFRAKLEDLKDQLFKKSIFGEVAAHVHVIEFQK 590

Query: 142 QGLPHMHMLFILKKDFKITNADQYDNYVSAEIPDSQTNPALHNAVVKHMLHGPCGEDNKK 201
           +GLPH+H L I++  FKITN DQYD  VSAEIPD   +P L+  VVKHM+HGPCG     
Sbjct: 591 RGLPHVHFLIIMRNSFKITNPDQYDKIVSAEIPDRNKHPLLYEMVVKHMMHGPCGHLKPN 650

Query: 202 CQCMINGKCKFHYPRQFSSKTMQGKDAYPIYRRRDDGKQEQIQ 245
             CM +GKC+FHYPRQFS  T+QGKD+YPIYRRR++G Q +I+
Sbjct: 651 SSCMRDGKCRFHYPRQFSETTIQGKDSYPIYRRRNNGCQVKIR 693

[Close]

BLAST of Lcy05g013170 vs. ExPASy TrEMBL
Match: A0A1S3ZC78 (ATP-dependent DNA helicase OS=Nicotiana tabacum OX=4097 GN=LOC107785255 PE=3 SV=1)

HSP 1 Score: 309.3 bits (791), Expect = 1.5e-80
Identity = 138/227 (60.79%), Postives = 182/227 (80.18%), Query Frame = 0


Query: 18  VVHQLLHRIVDVVNAGETRGDKVGKRVVLPSTFIGGPRDMRRRYLDAMALVQHFGKPDLF 77
           ++ ++L  IVD + A E RGDKVG+RV+LP++FIGGPRDMRRRY+DAMALVQHFGKPDLF
Sbjct: 230 LIREILQGIVDSIMAAEYRGDKVGQRVILPASFIGGPRDMRRRYMDAMALVQHFGKPDLF 289

Query: 78  ITMTCNAEWKEIREELMEGQLSQDRPYLTSRIFRGKLMDLKDQIVHKEIFGKVAAFVYVI 137
           IT  CN +W EI+E L EGQL++DRP L +R+FR KL DLKD+I  K+IFG VAA V+V+
Sbjct: 290 ITRICNPDWAEIKENLCEGQLAEDRPDLVTRVFRAKLQDLKDRIFKKKIFGPVAAHVFVV 349

Query: 138 EFHKQGLPHMHMLFILKKDFKITNADQYDNYVSAEIPDSQTNPALHNAVVKHMLHGPCGE 197
           EF K+GLPH+H+L IL++ +KI +ADQYD ++S E+PD +  P LH+ VVKHM+HGPCG+
Sbjct: 350 EFQKRGLPHIHLLIILEQGYKIISADQYDKFISTELPDEEEYPLLHDLVVKHMMHGPCGK 409

Query: 198 DNKKCQCMINGKCKFHYPRQFSSKTMQGKDAYPIYRRRDDGKQEQIQ 245
            +    CM +G+C  HYPR FS+K++QGKD YPIY+RR+DGK   ++
Sbjct: 410 HHPTNSCMKDGQCMNHYPRPFSNKSIQGKDGYPIYKRRNDGKTVNVR 456

[Close]

BLAST of Lcy05g013170 vs. ExPASy TrEMBL
Match: A0A5A7Q220 (DNA helicase homolog OS=Striga asiatica OX=4170 GN=STAS_15781 PE=4 SV=1)

HSP 1 Score: 304.3 bits (778), Expect = 4.8e-79
Identity = 141/229 (61.57%), Postives = 174/229 (75.98%), Query Frame = 0


Query: 21  QLLHRIVDVVNAGETRGDKVGKRVVLPSTFIGGPRDMRRRYLDAMALVQHFGKPDLFITM 80
           +L   I + V +GE RG +VGKR+VLPS+FIGGPRDMRRRYLDA+ALVQ FGKPDLFITM
Sbjct: 194 ELYQGIKESVQSGECRGSEVGKRIVLPSSFIGGPRDMRRRYLDALALVQKFGKPDLFITM 253

Query: 81  TCNAEWKEIREELMEGQLSQDRPYLTSRIFRGKLMDLKDQIVHKEIFGKVAAFVYVIEFH 140
           TCN EW+EI+++L EGQL QDRP L SR+FR KL DLK Q+  K+IFG+V A V+VIEF 
Sbjct: 254 TCNPEWQEIKDKLFEGQLPQDRPDLVSRVFRAKLQDLKGQLFKKQIFGEVVAHVHVIEFQ 313

Query: 141 KQGLPHMHMLFILKKDFKITNADQYDNYVSAEIPDSQTNPALHNAVVKHMLHGPCGEDNK 200
           K+GLPH HML ILK  +KI   D +D +V AE+P    +P L   VVKHM+HGPCG+ NK
Sbjct: 314 KRGLPHAHMLIILKSTYKIATPDHFDKFVCAELPSETEDPELFALVVKHMMHGPCGDINK 373

Query: 201 KCQCMINGKCKFHYPRQFSSKTMQGKDAYPIYRRRDDGKQEQIQEKEKD 250
              CMI+GKCK+HYPR+F   T QGKD YP+YRRR +G + +++  E D
Sbjct: 374 NNSCMIDGKCKYHYPRKFCDTTTQGKDGYPVYRRRQNGLKVKVRNAELD 422

[Close]

BLAST of Lcy05g013170 vs. ExPASy TrEMBL
Match: A0A3L6Q2E7 (Helitron_like_N domain-containing protein OS=Panicum miliaceum OX=4540 GN=C2845_PM17G08850 PE=4 SV=1)

HSP 1 Score: 303.5 bits (776), Expect = 8.2e-79
Identity = 137/229 (59.83%), Postives = 178/229 (77.73%), Query Frame = 0


Query: 21  QLLHRIVDVVNAGETRGDKVGKRVVLPSTFIGGPRDMRRRYLDAMALVQHFGKPDLFITM 80
           +L   +VDV+NAGETR  +VGKR+VLP +F GG RDM++R+L+AMA+VQ FGKPD FITM
Sbjct: 125 ELYQGLVDVINAGETRASEVGKRIVLPRSFPGGDRDMQQRFLNAMAIVQRFGKPDYFITM 184

Query: 81  TCNAEWKEIREELMEGQLSQDRPYLTSRIFRGKLMDLKDQIVHKEIFGKVAAFVYVIEFH 140
           TCN  W+EI   L  GQ +QDRP L +R++R KL D+KD ++ K+ FG+VAA+V+V EF 
Sbjct: 185 TCNPYWEEITSNLEPGQKAQDRPDLVARVYRAKLWDMKDLLIKKKYFGEVAAYVHVTEFQ 244

Query: 141 KQGLPHMHMLFILKKDFKITNADQYDNYVSAEIPDSQTNPALHNAVVKHMLHGPCGEDNK 200
           K+GLPH H+L I+K   K+T+ D YDN +SAEIPD    P LHN V+KHMLHGPCG  NK
Sbjct: 245 KRGLPHEHILLIMKSGSKLTSPDGYDNVISAEIPDKDKYPVLHNLVIKHMLHGPCGVLNK 304

Query: 201 KCQCMINGKCKFHYPRQFSSKTMQGKDAYPIYRRRDDGKQEQIQEKEKD 250
           KC CMING+C+FHYPRQF + T QGK++YP+YRRR+DG++ +I+  E D
Sbjct: 305 KCPCMINGECRFHYPRQFCAATQQGKESYPLYRRREDGRRVKIRGAELD 353

[Close]

BLAST of Lcy05g013170 vs. NCBI nr
Match: XP_015167740.1 (PREDICTED: uncharacterized protein LOC107062045 [Solanum tuberosum])

HSP 1 Score: 317.0 bits (811), Expect = 1.5e-82
Identity = 147/224 (65.62%), Postives = 179/224 (79.91%), Query Frame = 0


Query: 17  NVVHQLLHRIVDVVNAGETRGDKVGKRVVLPSTFIGGPRDMRRRYLDAMALVQHFGKPDL 76
           N   ++L  IVD V AGE+RGDKVG+RV+LP +FIGGPRDMRRRY+DAMALVQ FG+PDL
Sbjct: 221 NYRREILEGIVDSVTAGESRGDKVGQRVLLPGSFIGGPRDMRRRYMDAMALVQKFGRPDL 280

Query: 77  FITMTCNAEWKEIREELMEGQLSQDRPYLTSRIFRGKLMDLKDQIVHKEIFGKVAAFVYV 136
           FITMTCN EW EI++ L+ GQL QDRP L +R+FR KL DLKDQI  KEIFG +AA V+V
Sbjct: 281 FITMTCNPEWIEIQQALLPGQLPQDRPDLVTRVFRAKLQDLKDQIFKKEIFGPIAAHVFV 340

Query: 137 IEFHKQGLPHMHMLFILKKDFKITNADQYDNYVSAEIPDSQTNPALHNAVVKHMLHGPCG 196
           +EF K+GLPH+H+L I K+  KI +AD+YD Y+SAEIPDS T+P L   VV+HM+HGPCG
Sbjct: 341 VEFQKRGLPHIHLLLIFKEGNKIRSADEYDRYISAEIPDSDTHPELRALVVRHMIHGPCG 400

Query: 197 EDNKKCQCMINGKCKFHYPRQFSSKTMQGKDAYPIYRRRDDGKQ 241
           E  K   CM +G+CKFHYPR F++KT+QGKD YPIY+R   GKQ
Sbjct: 401 EKRKTSPCMKDGQCKFHYPRTFNNKTIQGKDGYPIYKREMMGKQ 444

[Close]

BLAST of Lcy05g013170 vs. NCBI nr
Match: XP_020100028.1 (uncharacterized protein LOC109718258 [Ananas comosus])

HSP 1 Score: 316.2 bits (809), Expect = 2.5e-82
Identity = 149/223 (66.82%), Postives = 178/223 (79.82%), Query Frame = 0


Query: 22  LLHRIVDVVNAGETRGDKVGKRVVLPSTFIGGPRDMRRRYLDAMALVQHFGKPDLFITMT 81
           L   IVD V +GE RG+ +GKR+VLPS+FIGGPRDMRRRYLDAMALVQ +GKPD+F+TMT
Sbjct: 471 LYQGIVDSVASGELRGNMIGKRIVLPSSFIGGPRDMRRRYLDAMALVQKYGKPDIFLTMT 530

Query: 82  CNAEWKEIREELMEGQLSQDRPYLTSRIFRGKLMDLKDQIVHKEIFGKVAAFVYVIEFHK 141
           CN +W+EIR EL  GQL+QDRP LTSRIFR KL DLKDQ+  K IFG+VAA V+VIEF K
Sbjct: 531 CNPDWEEIRSELEPGQLAQDRPDLTSRIFRAKLEDLKDQLFKKSIFGEVAAHVHVIEFQK 590

Query: 142 QGLPHMHMLFILKKDFKITNADQYDNYVSAEIPDSQTNPALHNAVVKHMLHGPCGEDNKK 201
           +GLPH+H L I++  FKITN DQYD  VSAEIPD   +P L+  VVKHM+HGPCG     
Sbjct: 591 RGLPHVHFLIIMRNSFKITNPDQYDKIVSAEIPDRNKHPLLYEMVVKHMMHGPCGHLKPN 650

Query: 202 CQCMINGKCKFHYPRQFSSKTMQGKDAYPIYRRRDDGKQEQIQ 245
             CM +GKC+FHYPRQFS  T+QGKD+YPIYRRR++G Q +I+
Sbjct: 651 SSCMRDGKCRFHYPRQFSETTIQGKDSYPIYRRRNNGCQVKIR 693

[Close]

BLAST of Lcy05g013170 vs. NCBI nr
Match: XP_012829391.1 (PREDICTED: uncharacterized protein LOC105950571 [Erythranthe guttata])

HSP 1 Score: 315.1 bits (806), Expect = 5.6e-82
Identity = 146/228 (64.04%), Postives = 180/228 (78.95%), Query Frame = 0


Query: 17  NVVHQLLHRIVDVVNAGETRGDKVGKRVVLPSTFIGGPRDMRRRYLDAMALVQHFGKPDL 76
           N+  +L   I++ V  GETRG +VGKRVVLP++FIGGPRDMRRRYLDA+ALVQ FGKPDL
Sbjct: 412 NLRSELYQGIMNSVLKGETRGSEVGKRVVLPASFIGGPRDMRRRYLDALALVQRFGKPDL 471

Query: 77  FITMTCNAEWKEIREELMEGQLSQDRPYLTSRIFRGKLMDLKDQIVHKEIFGKVAAFVYV 136
           FITMTCN EWKEI+E L +GQ +QDRP LTSR+FR KL DLKDQ+  KEIFGKV A V+V
Sbjct: 472 FITMTCNPEWKEIQENLYDGQKAQDRPDLTSRVFRAKLQDLKDQLFKKEIFGKVVAHVHV 531

Query: 137 IEFHKQGLPHMHMLFILKKDFKITNADQYDNYVSAEIPDSQTNPALHNAVVKHMLHGPCG 196
           IEF K+GLPH H+L I+K ++KIT+ D +D +VSAEIPD +  P LH  V KHM+HGPCG
Sbjct: 532 IEFQKRGLPHAHILVIMKSEYKITSPDNFDRFVSAEIPDEEQYPLLHALVRKHMMHGPCG 591

Query: 197 EDNKKCQCMINGKCKFHYPRQFSSKTMQGKDAYPIYRRRDDGKQEQIQ 245
           E NK+  CM++GKCK+HYPR +   T+QGK  YPIYRRR+ G   +++
Sbjct: 592 EKNKQNSCMVDGKCKYHYPRSYCQSTIQGKGGYPIYRRRNTGINVEVR 639

[Close]

BLAST of Lcy05g013170 vs. NCBI nr
Match: XP_015167793.1 (PREDICTED: uncharacterized protein LOC107062081 [Solanum tuberosum])

HSP 1 Score: 313.2 bits (801), Expect = 2.1e-81
Identity = 141/228 (61.84%), Postives = 180/228 (78.95%), Query Frame = 0


Query: 17  NVVHQLLHRIVDVVNAGETRGDKVGKRVVLPSTFIGGPRDMRRRYLDAMALVQHFGKPDL 76
           N   ++L  IVD V +GE RG+KVG+RV+LP +FIGGPRDMRRRY+DAMALVQ FG+PDL
Sbjct: 384 NYRKEILQGIVDSVTSGECRGEKVGQRVLLPGSFIGGPRDMRRRYMDAMALVQEFGRPDL 443

Query: 77  FITMTCNAEWKEIREELMEGQLSQDRPYLTSRIFRGKLMDLKDQIVHKEIFGKVAAFVYV 136
           FITMTCN EW EI+E+L  GQ++QDRP L +R+FR KL DLKDQI  KEIFG  AA V+V
Sbjct: 444 FITMTCNPEWTEIQEQLCVGQVAQDRPDLVTRVFRAKLQDLKDQIFKKEIFGPTAAHVFV 503

Query: 137 IEFHKQGLPHMHMLFILKKDFKITNADQYDNYVSAEIPDSQTNPALHNAVVKHMLHGPCG 196
           +EF K+GLPH+H+L ILK+  KI +ADQYD Y+SAE+P     P LH  V++HM+HGPCG
Sbjct: 504 VEFQKRGLPHIHLLLILKEGHKIRSADQYDRYISAELPAKDKQPELHELVIRHMIHGPCG 563

Query: 197 EDNKKCQCMINGKCKFHYPRQFSSKTMQGKDAYPIYRRRDDGKQEQIQ 245
              +   CM +G+CKFHYPR F++KT+QG+D YPIYRRR+DG+  +++
Sbjct: 564 IKRQSSPCMKDGQCKFHYPRAFNNKTIQGRDGYPIYRRRNDGRTSEVR 611

[Close]

BLAST of Lcy05g013170 vs. NCBI nr
Match: XP_012841028.1 (PREDICTED: uncharacterized protein LOC105961341 [Erythranthe guttata])

HSP 1 Score: 312.8 bits (800), Expect = 2.8e-81
Identity = 145/228 (63.60%), Postives = 176/228 (77.19%), Query Frame = 0


Query: 17  NVVHQLLHRIVDVVNAGETRGDKVGKRVVLPSTFIGGPRDMRRRYLDAMALVQHFGKPDL 76
           N+  +L   I+  V  GETRG++VGKR++LP +FIGGPRDMRRRYLDA+ALVQ FGKPD 
Sbjct: 490 NLRSELYQGIMKSVQQGETRGNEVGKRIILPPSFIGGPRDMRRRYLDALALVQRFGKPDF 549

Query: 77  FITMTCNAEWKEIREELMEGQLSQDRPYLTSRIFRGKLMDLKDQIVHKEIFGKVAAFVYV 136
           FITMTCN EW EI+E L  GQ +QDRP LTSR+FR KL DLKDQ+  KEI GKVAA V+V
Sbjct: 550 FITMTCNPEWAEIQENLYPGQKAQDRPDLTSRVFRAKLQDLKDQLFKKEILGKVAAHVHV 609

Query: 137 IEFHKQGLPHMHMLFILKKDFKITNADQYDNYVSAEIPDSQTNPALHNAVVKHMLHGPCG 196
           IEF K+GLPH HML ILK ++KIT  D YD +VSAE+PD + +PALH  VVKHM+HGPCG
Sbjct: 610 IEFQKRGLPHAHMLIILKSEYKITTPDTYDRFVSAELPDPEKHPALHALVVKHMMHGPCG 669

Query: 197 EDNKKCQCMINGKCKFHYPRQFSSKTMQGKDAYPIYRRRDDGKQEQIQ 245
             NK   CM++ KCK+HYPR +   T+QGKD YPIY+RR +G   Q++
Sbjct: 670 SKNKSNSCMVDEKCKYHYPRPYCESTIQGKDGYPIYKRRRNGITVQVR 717

The following BLAST results are available for this feature:

BLAST of Lcy05g013170 vs.


Match Name	E-value	Identity	Description

BLAST of Lcy05g013170 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5B7A9C3	3.7e-87	66.52	ATP-dependent DNA helicase OS=Davidia involucrata OX=16924 GN=Din_021512 PE=3 SV...	[more]
A0A6P5G2W9	1.2e-82	66.82	ATP-dependent DNA helicase OS=Ananas comosus OX=4615 GN=LOC109718258 PE=3 SV=1	[more]
A0A1S3ZC78	1.5e-80	60.79	ATP-dependent DNA helicase OS=Nicotiana tabacum OX=4097 GN=LOC107785255 PE=3 SV=...	[more]
A0A5A7Q220	4.8e-79	61.57	DNA helicase homolog OS=Striga asiatica OX=4170 GN=STAS_15781 PE=4 SV=1	[more]
A0A3L6Q2E7	8.2e-79	59.83	Helitron_like_N domain-containing protein OS=Panicum miliaceum OX=4540 GN=C2845_...	[more]

BLAST of Lcy05g013170 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_015167740.1	1.5e-82	65.63	PREDICTED: uncharacterized protein LOC107062045 [Solanum tuberosum]	[more]
XP_020100028.1	2.5e-82	66.82	uncharacterized protein LOC109718258 [Ananas comosus]	[more]
XP_012829391.1	5.6e-82	64.04	PREDICTED: uncharacterized protein LOC105950571 [Erythranthe guttata]	[more]
XP_015167793.1	2.1e-81	61.84	PREDICTED: uncharacterized protein LOC107062081 [Solanum tuberosum]	[more]
XP_012841028.1	2.8e-81	63.60	PREDICTED: uncharacterized protein LOC105961341 [Erythranthe guttata]	[more]

BLAST of Lcy05g013170 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025476	Helitron helicase-like domain	PFAM	PF14214	Helitron_like_N	coord: 26..151 e-value: 3.5E-39 score: 135.0
None	No IPR available	PANTHER	PTHR10492	UNCHARACTERIZED	coord: 20..247
None	No IPR available	PANTHER	PTHR10492:SF57	ATP-DEPENDENT DNA HELICASE	coord: 20..247

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy05g013170.1	Lcy05g013170.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0032508	DNA duplex unwinding
biological_process	GO:0006310	DNA recombination
biological_process	GO:0006281	DNA repair
biological_process	GO:0000723	telomere maintenance
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0016887	ATP hydrolysis activity
molecular_function	GO:0003678	DNA helicase activity