Lcy05g013080 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy05g013080
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	BEST Arabidopsis thaliana protein match is: hydroxyproline-rich glycoprotein family protein .
Location	Chr05: 15331030 .. 15331656 (+)
RNA-Seq Expression	Lcy05g013080
Synteny	Lcy05g013080

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGAATACCAACCAAAGCTACGAGGGTCTCGATCTCGAACTCTCCCTCCGCCTGCCGCCGCCGCCGCCTCCTCCACCTCCTCCGCAGCAGCCACCCGAACATCCGAGACGAACGAGGTTTCGACTAGACAACACGCCGATCGAGCCACCATATCCATGGTCGACAGAGCACCGGGCGGTAGTCCACGAGCTCGACTACCTCCAATCGAACAGCATCCTGACGATCACCGGTGACGTCGAGTGCGGGCGGTGCGAGAAACGGTACGAGATGAAGTACGACCTGCTCGAGAAGTTCGAGGAGATAGCGAGTTTCATAGAGCAAAACAGGGACACCATGCACGAGAGAGCGCCGAGTTCGTGGGTGGACTCGGTTTTGCCGGATTGCGAGTTATGTGGGGAAGAGAAGTGCGTGGAGCCGGTGATTCCTGAGAATGATCACGACAACATTAACTGGCTGTTCTTGCTTTTGGGACAATTGCTTGGACGTTTGAGACTCCATCAGCTCAAATATTTCTGTGCTTACACCAACAATCATCGGACTGGTGCAAAGAATCGGCTTCTTTATCTCACTTATCTTGCTTTGTGTAAGCAGCTTCAGCCCTCCAACAGACTCTTCCATCGCTGA

mRNA sequence

ATGGAGAATACCAACCAAAGCTACGAGGGTCTCGATCTCGAACTCTCCCTCCGCCTGCCGCCGCCGCCGCCTCCTCCACCTCCTCCGCAGCAGCCACCCGAACATCCGAGACGAACGAGGTTTCGACTAGACAACACGCCGATCGAGCCACCATATCCATGGTCGACAGAGCACCGGGCGGTAGTCCACGAGCTCGACTACCTCCAATCGAACAGCATCCTGACGATCACCGGTGACGTCGAGTGCGGGCGGTGCGAGAAACGGTACGAGATGAAGTACGACCTGCTCGAGAAGTTCGAGGAGATAGCGAGTTTCATAGAGCAAAACAGGGACACCATGCACGAGAGAGCGCCGAGTTCGTGGGTGGACTCGGTTTTGCCGGATTGCGAGTTATGTGGGGAAGAGAAGTGCGTGGAGCCGGTGATTCCTGAGAATGATCACGACAACATTAACTGGCTGTTCTTGCTTTTGGGACAATTGCTTGGACGTTTGAGACTCCATCAGCTCAAATATTTCTGTGCTTACACCAACAATCATCGGACTGGTGCAAAGAATCGGCTTCTTTATCTCACTTATCTTGCTTTGTGTAAGCAGCTTCAGCCCTCCAACAGACTCTTCCATCGCTGA

Coding sequence (CDS)

ATGGAGAATACCAACCAAAGCTACGAGGGTCTCGATCTCGAACTCTCCCTCCGCCTGCCGCCGCCGCCGCCTCCTCCACCTCCTCCGCAGCAGCCACCCGAACATCCGAGACGAACGAGGTTTCGACTAGACAACACGCCGATCGAGCCACCATATCCATGGTCGACAGAGCACCGGGCGGTAGTCCACGAGCTCGACTACCTCCAATCGAACAGCATCCTGACGATCACCGGTGACGTCGAGTGCGGGCGGTGCGAGAAACGGTACGAGATGAAGTACGACCTGCTCGAGAAGTTCGAGGAGATAGCGAGTTTCATAGAGCAAAACAGGGACACCATGCACGAGAGAGCGCCGAGTTCGTGGGTGGACTCGGTTTTGCCGGATTGCGAGTTATGTGGGGAAGAGAAGTGCGTGGAGCCGGTGATTCCTGAGAATGATCACGACAACATTAACTGGCTGTTCTTGCTTTTGGGACAATTGCTTGGACGTTTGAGACTCCATCAGCTCAAATATTTCTGTGCTTACACCAACAATCATCGGACTGGTGCAAAGAATCGGCTTCTTTATCTCACTTATCTTGCTTTGTGTAAGCAGCTTCAGCCCTCCAACAGACTCTTCCATCGCTGA

Protein sequence

MENTNQSYEGLDLELSLRLPPPPPPPPPPQQPPEHPRRTRFRLDNTPIEPPYPWSTEHRAVVHELDYLQSNSILTITGDVECGRCEKRYEMKYDLLEKFEEIASFIEQNRDTMHERAPSSWVDSVLPDCELCGEEKCVEPVIPENDHDNINWLFLLLGQLLGRLRLHQLKYFCAYTNNHRTGAKNRLLYLTYLALCKQLQPSNRLFHR

Homology

[Close]

BLAST of Lcy05g013080 vs. ExPASy TrEMBL
Match: A0A6J1C462 (uncharacterized protein LOC111007768 OS=Momordica charantia OX=3673 GN=LOC111007768 PE=4 SV=1)

HSP 1 Score: 275.0 bits (702), Expect = 2.5e-70
Identity = 130/191 (68.06%), Postives = 151/191 (79.06%), Query Frame = 0


Query: 18  RLPPPPPPPPPPQQPPEHPRRTRFRLDNTPIEPPYPWSTEHRAVVHELDYLQSNSILTIT 77
           R  P P     P  P    RR+R  L NTPI+PPYPWSTEH+AVVH+L+YL+ N ILTIT
Sbjct: 92  RASPSPRRAREPASPVVRQRRSRVELKNTPIKPPYPWSTEHQAVVHDLNYLRENQILTIT 151

Query: 78  GDVECGRCEKRYEMKYDLLEKFEEIASFIEQNRDTMHERAPSSWVDSVLPDCELCGEEKC 137
           GDV C RCEK+Y ++YDL+ KFEEIASFIE+N+ T+H+RAP SW +    DC+LCGEE C
Sbjct: 152 GDVRCDRCEKQYTIEYDLMTKFEEIASFIEKNKATLHDRAPESWTNPNFLDCKLCGEENC 211

Query: 138 VEPVIPENDHDNINWLFLLLGQLLGRLRLHQLKYFCAYTNNHRTGAKNRLLYLTYLALCK 197
           V P IPE D+ NINWLFLLLGQ++GRL+L  LKYFCAYTNNHRTGAKNRL+YLTYL LCK
Sbjct: 212 VRPTIPEGDNKNINWLFLLLGQMIGRLKLEHLKYFCAYTNNHRTGAKNRLVYLTYLTLCK 271

Query: 198 QLQPSNRLFHR 209
           QLQPS  LFHR
Sbjct: 272 QLQPSMELFHR 282

[Close]

BLAST of Lcy05g013080 vs. ExPASy TrEMBL
Match: A0A6J1C690 (probable serine/threonine-protein kinase samkC OS=Momordica charantia OX=3673 GN=LOC111007769 PE=4 SV=1)

HSP 1 Score: 255.8 bits (652), Expect = 1.6e-64
Identity = 127/212 (59.91%), Postives = 157/212 (74.06%), Query Frame = 0


Query: 3   NTNQSYEGLDLELSLRLPPP--PPPPPPPQQPPEHPRRTRFRLDNTPIEPPYPWSTEHRA 62
           NT+QS +      S +  P   P      QQ P   RR R +  +T IEPPYPWST +RA
Sbjct: 144 NTSQSLKPSRKRRSSQESPSTHPSSSEQRQQKPNISRRPRIKPKDTAIEPPYPWSTANRA 203

Query: 63  VVHELDYLQSNSILTITGDVECGRCEKRYEMKYDLLEKFEEIASFIEQNRDTMHERAPSS 122
           VVH+L YLQ N ILTITGDV+C +C+K+Y+++YDL+ KF+EIASFIE+N+DT+H+RAPSS
Sbjct: 204 VVHDLKYLQQNQILTITGDVKCSQCQKQYKIEYDLVTKFDEIASFIEKNKDTLHDRAPSS 263

Query: 123 WVDSVLPDCELCGEEKCVEPVIPENDHD----NINWLFLLLGQLLGRLRLHQLKYFCAYT 182
           W +  LP+C+ CG+E C+ PVIP  D D    NINWLFLLLGQ++G L L  LKYFC YT
Sbjct: 264 WTNPNLPNCKFCGQESCMRPVIPPEDEDDDYKNINWLFLLLGQMIGCLGLKHLKYFCTYT 323

Query: 183 NNHRTGAKNRLLYLTYLALCKQLQPSNRLFHR 209
           NNHRT AK+RL+YLTYL+LCKQLQPS  LFHR
Sbjct: 324 NNHRTAAKDRLVYLTYLSLCKQLQPSTELFHR 355

[Close]

BLAST of Lcy05g013080 vs. ExPASy TrEMBL
Match: A0A6J1GM83 (mucin-16-like OS=Cucurbita moschata OX=3662 GN=LOC111455541 PE=4 SV=1)

HSP 1 Score: 254.2 bits (648), Expect = 4.7e-64
Identity = 116/175 (66.29%), Postives = 143/175 (81.71%), Query Frame = 0


Query: 37  RRTRFRLDNTPIEPPYPWSTEHRAVVHELDYLQSNSILTITGDVECGRCEKRYEMKYDLL 96
           RR+R R D   IEPPYPWS E RA +H L+YLQSN+I+TI GDV C +CE+ YE++Y+L+
Sbjct: 436 RRSRTRADTRRIEPPYPWSAEQRASIHNLEYLQSNNIVTIKGDVRCKKCERFYEIEYNLM 495

Query: 97  EKFEEIASFIEQNRDTMHERAPSSWVDSVLPDCELCGEEKCVEPVIPENDHDN----INW 156
            KF+EIA FIE+ RD MH+RAP  W + +LP+CE C EE CVEP+IP+ + DN    INW
Sbjct: 496 NKFDEIARFIERERDNMHDRAPICWKNPILPNCEHCREENCVEPMIPDEEDDNQFSRINW 555

Query: 157 LFLLLGQLLGRLRLHQLKYFCAYTNNHRTGAKNRLLYLTYLALCKQLQPSNRLFH 208
           LFLLLGQL+GRL+L QLKYFCA+T NHRTGAK+RL++LTYLALCKQLQPSNRLF+
Sbjct: 556 LFLLLGQLIGRLKLKQLKYFCAHTYNHRTGAKDRLIFLTYLALCKQLQPSNRLFN 610

[Close]

BLAST of Lcy05g013080 vs. ExPASy TrEMBL
Match: A0A6J1I8I0 (uncharacterized protein KIAA0754-like OS=Cucurbita maxima OX=3661 GN=LOC111470967 PE=4 SV=1)

HSP 1 Score: 252.3 bits (643), Expect = 1.8e-63
Identity = 115/175 (65.71%), Postives = 142/175 (81.14%), Query Frame = 0


Query: 37  RRTRFRLDNTPIEPPYPWSTEHRAVVHELDYLQSNSILTITGDVECGRCEKRYEMKYDLL 96
           RR+R R D   IEPPYPWS E RA +H L+YLQSN+I+ I GDV C +CE+ YE++Y+L+
Sbjct: 430 RRSRTRADTRRIEPPYPWSAEQRASIHNLEYLQSNNIVMIKGDVRCKKCERYYEIEYNLM 489

Query: 97  EKFEEIASFIEQNRDTMHERAPSSWVDSVLPDCELCGEEKCVEPVIPENDHDN----INW 156
            KF+EIA FIE+ RD MH+RAP  W + +LP+CE C EE CVEP+IP+ + DN    INW
Sbjct: 490 NKFDEIARFIERERDNMHDRAPICWKNPILPNCEHCREENCVEPMIPDEEDDNQFRRINW 549

Query: 157 LFLLLGQLLGRLRLHQLKYFCAYTNNHRTGAKNRLLYLTYLALCKQLQPSNRLFH 208
           LFLLLGQL+GRL+L QLKYFCA+T NHRTGAK+RL++LTYLALCKQLQPSNRLF+
Sbjct: 550 LFLLLGQLIGRLKLKQLKYFCAHTYNHRTGAKDRLIFLTYLALCKQLQPSNRLFN 604

[Close]

BLAST of Lcy05g013080 vs. ExPASy TrEMBL
Match: A0A1S3AZB1 (protein PAF1 homolog OS=Cucumis melo OX=3656 GN=LOC103484199 PE=4 SV=1)

HSP 1 Score: 227.3 bits (578), Expect = 6.1e-56
Identity = 111/188 (59.04%), Postives = 145/188 (77.13%), Query Frame = 0


Query: 21  PPPPPPPPPQ---QPPE--HPRRTRFRLDNTPIEPPYPWSTEHRAVVHELDYLQSNSILT 80
           PP  P P  Q   QPPE   P+R R + DN+ IEPPYPWSTE  AV+H+L+YL++N+ILT
Sbjct: 152 PPEIPKPKRQTQNQPPEIPKPKRRRTQADNSRIEPPYPWSTEKGAVIHKLEYLEANNILT 211

Query: 81  ITGDVECGRCEKRYEMKYDLLEKFEEIASFIEQNRDTMHERAPSSWVDSVLPDCELCGEE 140
           I G+V+C RC+++ E++Y+L+ KF+EI  FIE+ +D MH+RAP  WV+ +L +C  C +E
Sbjct: 212 IKGEVKCKRCDRKDEIEYELISKFDEIRRFIEREKDNMHDRAPDRWVNPILLNCNFCNKE 271

Query: 141 KCVEPVIPENDHDNINWLFLLLGQLLGRLRLHQLKYFCAYTNNHRTGAKNRLLYLTYLAL 200
           +CVEP+I E  + NINWLFLLLG  LG L+L QLKYFC  TN HRTGAK+RL+YLTYLAL
Sbjct: 272 ECVEPIISE-ANSNINWLFLLLGNFLGCLKLSQLKYFCTQTNIHRTGAKDRLIYLTYLAL 331

Query: 201 CKQLQPSN 204
           CKQLQP++
Sbjct: 332 CKQLQPNS 338

[Close]

BLAST of Lcy05g013080 vs. NCBI nr
Match: XP_022135937.1 (uncharacterized protein LOC111007768 [Momordica charantia])

HSP 1 Score: 275.0 bits (702), Expect = 5.3e-70
Identity = 130/191 (68.06%), Postives = 151/191 (79.06%), Query Frame = 0


Query: 18  RLPPPPPPPPPPQQPPEHPRRTRFRLDNTPIEPPYPWSTEHRAVVHELDYLQSNSILTIT 77
           R  P P     P  P    RR+R  L NTPI+PPYPWSTEH+AVVH+L+YL+ N ILTIT
Sbjct: 92  RASPSPRRAREPASPVVRQRRSRVELKNTPIKPPYPWSTEHQAVVHDLNYLRENQILTIT 151

Query: 78  GDVECGRCEKRYEMKYDLLEKFEEIASFIEQNRDTMHERAPSSWVDSVLPDCELCGEEKC 137
           GDV C RCEK+Y ++YDL+ KFEEIASFIE+N+ T+H+RAP SW +    DC+LCGEE C
Sbjct: 152 GDVRCDRCEKQYTIEYDLMTKFEEIASFIEKNKATLHDRAPESWTNPNFLDCKLCGEENC 211

Query: 138 VEPVIPENDHDNINWLFLLLGQLLGRLRLHQLKYFCAYTNNHRTGAKNRLLYLTYLALCK 197
           V P IPE D+ NINWLFLLLGQ++GRL+L  LKYFCAYTNNHRTGAKNRL+YLTYL LCK
Sbjct: 212 VRPTIPEGDNKNINWLFLLLGQMIGRLKLEHLKYFCAYTNNHRTGAKNRLVYLTYLTLCK 271

Query: 198 QLQPSNRLFHR 209
           QLQPS  LFHR
Sbjct: 272 QLQPSMELFHR 282

[Close]

BLAST of Lcy05g013080 vs. NCBI nr
Match: XP_022135938.1 (probable serine/threonine-protein kinase samkC [Momordica charantia])

HSP 1 Score: 255.8 bits (652), Expect = 3.3e-64
Identity = 127/212 (59.91%), Postives = 157/212 (74.06%), Query Frame = 0


Query: 3   NTNQSYEGLDLELSLRLPPP--PPPPPPPQQPPEHPRRTRFRLDNTPIEPPYPWSTEHRA 62
           NT+QS +      S +  P   P      QQ P   RR R +  +T IEPPYPWST +RA
Sbjct: 144 NTSQSLKPSRKRRSSQESPSTHPSSSEQRQQKPNISRRPRIKPKDTAIEPPYPWSTANRA 203

Query: 63  VVHELDYLQSNSILTITGDVECGRCEKRYEMKYDLLEKFEEIASFIEQNRDTMHERAPSS 122
           VVH+L YLQ N ILTITGDV+C +C+K+Y+++YDL+ KF+EIASFIE+N+DT+H+RAPSS
Sbjct: 204 VVHDLKYLQQNQILTITGDVKCSQCQKQYKIEYDLVTKFDEIASFIEKNKDTLHDRAPSS 263

Query: 123 WVDSVLPDCELCGEEKCVEPVIPENDHD----NINWLFLLLGQLLGRLRLHQLKYFCAYT 182
           W +  LP+C+ CG+E C+ PVIP  D D    NINWLFLLLGQ++G L L  LKYFC YT
Sbjct: 264 WTNPNLPNCKFCGQESCMRPVIPPEDEDDDYKNINWLFLLLGQMIGCLGLKHLKYFCTYT 323

Query: 183 NNHRTGAKNRLLYLTYLALCKQLQPSNRLFHR 209
           NNHRT AK+RL+YLTYL+LCKQLQPS  LFHR
Sbjct: 324 NNHRTAAKDRLVYLTYLSLCKQLQPSTELFHR 355

[Close]

BLAST of Lcy05g013080 vs. NCBI nr
Match: XP_038895979.1 (junction-mediating and -regulatory protein-like [Benincasa hispida])

HSP 1 Score: 255.4 bits (651), Expect = 4.3e-64
Identity = 136/263 (51.71%), Postives = 158/263 (60.08%), Query Frame = 0


Query: 3   NTNQSYEGLDLELSLRLPPPP----PPPPPPQQPP------------------------- 62
           N N      +LELSLRLP PP    PPPPPP  PP                         
Sbjct: 7   NQNDYQWQSNLELSLRLPSPPPLESPPPPPPYPPPLESPPPPSPLEYPLLSTTTSLSPRK 66

Query: 63  ------------------------------EHPRRTRFRLDNTPIEPPYPWSTEHRAVVH 122
                                           PRR R R D T IEPPYPWST+ RAV+H
Sbjct: 67  TPNESEEIPTQHNNETSNHQQQPMEIVEPQPRPRRRRTRADMTRIEPPYPWSTDRRAVIH 126

Query: 123 ELDYLQSNSILTITGDVECGRCEKRYEMKYDLLEKFEEIASFIEQNRDTMHERAPSSWVD 182
           EL YLQSN+I+TI G+V+C +CE++YEM+YDL+ KF EIA FIE  +D+MH+RAP  W  
Sbjct: 127 ELKYLQSNNIVTIKGEVKCKKCEQKYEMEYDLMNKFNEIARFIEYEKDSMHDRAPKCWTK 186

Query: 183 SVLPDCELCGEEKCVEPVIPENDHDNINWLFLLLGQLLGRLRLHQLKYFCAYTNNHRTGA 207
            +LP+C LC +E+CVEPVI E D+  INWLFLLLG+ LG L+L QLKYFCA TN HRTGA
Sbjct: 187 PILPNCNLCNKERCVEPVISEEDYTKINWLFLLLGKFLGCLKLKQLKYFCAQTNIHRTGA 246

[Close]

BLAST of Lcy05g013080 vs. NCBI nr
Match: KAG7011696.1 (hypothetical protein SDJN02_26602, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 255.0 bits (650), Expect = 5.6e-64
Identity = 116/175 (66.29%), Postives = 143/175 (81.71%), Query Frame = 0


Query: 37  RRTRFRLDNTPIEPPYPWSTEHRAVVHELDYLQSNSILTITGDVECGRCEKRYEMKYDLL 96
           RR+R R D   IEPPYPWS E RA +H L+YLQSN+I+TI GDV C +CE+ YE++Y+L+
Sbjct: 251 RRSRTRADTRRIEPPYPWSAEQRASIHNLEYLQSNNIVTIKGDVRCKKCERFYEIEYNLM 310

Query: 97  EKFEEIASFIEQNRDTMHERAPSSWVDSVLPDCELCGEEKCVEPVIPENDHDN----INW 156
            KF+EIA FIE+ RD MH+RAP  W + +LP+CE C EE CVEP+IP+ + DN    INW
Sbjct: 311 NKFDEIARFIERERDNMHDRAPICWKNPILPNCEYCREENCVEPMIPDEEDDNQFSRINW 370

Query: 157 LFLLLGQLLGRLRLHQLKYFCAYTNNHRTGAKNRLLYLTYLALCKQLQPSNRLFH 208
           LFLLLGQL+GRL+L QLKYFCA+T NHRTGAK+RL++LTYLALCKQLQPSNRLF+
Sbjct: 371 LFLLLGQLIGRLKLKQLKYFCAHTYNHRTGAKDRLIFLTYLALCKQLQPSNRLFN 425

[Close]

BLAST of Lcy05g013080 vs. NCBI nr
Match: KAG6572024.1 (hypothetical protein SDJN03_28752, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 254.2 bits (648), Expect = 9.6e-64
Identity = 116/175 (66.29%), Postives = 143/175 (81.71%), Query Frame = 0


Query: 37  RRTRFRLDNTPIEPPYPWSTEHRAVVHELDYLQSNSILTITGDVECGRCEKRYEMKYDLL 96
           RR+R R D   IEPPYPWS E RA +H L+YLQSN+I+TI GDV C +CE+ YE++Y+L+
Sbjct: 423 RRSRTRADTRRIEPPYPWSAEQRASIHNLEYLQSNNIVTIKGDVRCKKCERFYEIEYNLM 482

Query: 97  EKFEEIASFIEQNRDTMHERAPSSWVDSVLPDCELCGEEKCVEPVIPENDHDN----INW 156
            KF+EIA FIE+ RD MH+RAP  W + +LP+CE C EE CVEP+IP+ + DN    INW
Sbjct: 483 NKFDEIARFIERERDNMHDRAPICWKNPILPNCEHCREENCVEPMIPDEEDDNQFSRINW 542

Query: 157 LFLLLGQLLGRLRLHQLKYFCAYTNNHRTGAKNRLLYLTYLALCKQLQPSNRLFH 208
           LFLLLGQL+GRL+L QLKYFCA+T NHRTGAK+RL++LTYLALCKQLQPSNRLF+
Sbjct: 543 LFLLLGQLIGRLKLKQLKYFCAHTYNHRTGAKDRLIFLTYLALCKQLQPSNRLFN 597

[Close]

BLAST of Lcy05g013080 vs. TAIR 10
Match: AT1G49330.1 (hydroxyproline-rich glycoprotein family protein )

HSP 1 Score: 173.3 bits (438), Expect = 2.0e-43
Identity = 91/191 (47.64%), Postives = 115/191 (60.21%), Query Frame = 0


Query: 16  SLRLPPPPPPPPPPQQPPEHPRRTRFRLDNTPIEPPYPWSTEHRAVVHELDYLQSNSILT 75
           S  L PPP   P       +  R+     +  I PP+PW+T  R  +  L+YL+SN I T
Sbjct: 135 SSNLTPPPVKRPVTGSVRIYRSRSTVSKKSDTISPPFPWATNRRGEIQSLEYLESNQITT 194

Query: 76  ITGDVECGRCEKRYEMKYDLLEKFEEIASFIEQNRDTMHERAPSSWVDSVLPDCELCGEE 135
           ITG+V+C  CEK Y++ Y+L E+F E+  F    +  M +RA   W       CELCG E
Sbjct: 195 ITGEVQCRHCEKVYQVSYNLRERFAEVVKFYLTEKRKMRDRAHKDWAYPEQRRCELCGRE 254

Query: 136 KCVEPVIPENDHDNINWLFLLLGQLLGRLRLHQLKYFCAYTNNHRTGAKNRLLYLTYLAL 195
           K V+PVI E     INWLFLLLGQ LG   L QLK FC ++ NHRTGAK+R+LYLTY+ L
Sbjct: 255 KAVKPVIAER-KSQINWLFLLLGQTLGFCTLEQLKNFCKHSKNHRTGAKDRVLYLTYMGL 314

Query: 196 CKQLQPSNRLF 207
           CK LQP + LF
Sbjct: 315 CKMLQPKSDLF 324

[Close]

BLAST of Lcy05g013080 vs. TAIR 10
Match: AT2G16190.1 (BEST Arabidopsis thaliana protein match is: hydroxyproline-rich glycoprotein family protein (TAIR:AT1G49330.1); Has 77 Blast hits to 77 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 6; Fungi - 13; Plants - 56; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). )

HSP 1 Score: 138.7 bits (348), Expect = 5.5e-33
Identity = 77/190 (40.53%), Postives = 111/190 (58.42%), Query Frame = 0


Query: 16  SLRLPPPPPPPPPPQQPPEHPRR----TRFRLDNTPIEPPYPWSTEHRAVVHELDYLQSN 75
           ++ L  P    PP  Q   + +R        + +  I PPYPW+T+    +     L SN
Sbjct: 111 TVALATPRRGRPPGGQARRNSKRPVAGVERNVGDREIVPPYPWATKKPGKIQSFRDLSSN 170

Query: 76  SILTITGDVECGRCEKRYEMKYDLLEKFEEIASFIEQNRDTMHERAPSSWVDSVLPDCEL 135
           +I  I+G V C  C++   ++Y+L EKF E+  +I+ N++ M  RAP SW    L  C  
Sbjct: 171 NINVISGQVHCKTCDRTDTVEYNLEEKFSELYGYIKVNKEEMRHRAPGSWSTPKLIPCRT 230

Query: 136 CGEEKCVEPVIPENDHDNINWLFLLLGQLLGRLRLHQLKYFCAYTNNHRTGAKNRLLYLT 195
           C  E  ++PV+ E   + INWLFLLLGQ+LG   L QL+YFC   + HRTG+K+R++Y+T
Sbjct: 231 CKSE--MKPVMSER-KEEINWLFLLLGQMLGCCTLDQLRYFCQLNSKHRTGSKDRVVYIT 290

Query: 196 YLALCKQLQP 202
           YL+LCKQL P
Sbjct: 291 YLSLCKQLDP 297

[Close]

BLAST of Lcy05g013080 vs. TAIR 10
Match: AT2G16190.2 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: hydroxyproline-rich glycoprotein family protein (TAIR:AT1G49330.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 92.4 bits (228), Expect = 4.5e-19
Identity = 58/158 (36.71%), Postives = 84/158 (53.16%), Query Frame = 0


Query: 16  SLRLPPPPPPPPPPQQPPEHPRR----TRFRLDNTPIEPPYPWSTEHRAVVHELDYLQSN 75
           ++ L  P    PP  Q   + +R        + +  I PPYPW+T+    +     L SN
Sbjct: 111 TVALATPRRGRPPGGQARRNSKRPVAGVERNVGDREIVPPYPWATKKPGKIQSFRDLSSN 170

Query: 76  SILTITGDVECGRCEKRYEMKYDLLEKFEEIASFIEQNRDTMHERAPSSWVDSVLPDCEL 135
           +I  I+G V C  C++   ++Y+L EKF E+  +I+ N++ M  RAP SW    L  C  
Sbjct: 171 NINVISGQVHCKTCDRTDTVEYNLEEKFSELYGYIKVNKEEMRHRAPGSWSTPKLIPCRT 230

Query: 136 CGEEKCVEPVIPENDHDNINWLFLLLGQLLGRLRLHQL 170
           C  E  ++PV+ E   + INWLFLLLGQ+LG   L QL
Sbjct: 231 CKSE--MKPVMSER-KEEINWLFLLLGQMLGCCTLDQL 265

The following BLAST results are available for this feature:

BLAST of Lcy05g013080 vs.


Match Name	E-value	Identity	Description

BLAST of Lcy05g013080 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1C462	2.5e-70	68.06	uncharacterized protein LOC111007768 OS=Momordica charantia OX=3673 GN=LOC111007...	[more]
A0A6J1C690	1.6e-64	59.91	probable serine/threonine-protein kinase samkC OS=Momordica charantia OX=3673 GN...	[more]
A0A6J1GM83	4.7e-64	66.29	mucin-16-like OS=Cucurbita moschata OX=3662 GN=LOC111455541 PE=4 SV=1	[more]
A0A6J1I8I0	1.8e-63	65.71	uncharacterized protein KIAA0754-like OS=Cucurbita maxima OX=3661 GN=LOC11147096...	[more]
A0A1S3AZB1	6.1e-56	59.04	protein PAF1 homolog OS=Cucumis melo OX=3656 GN=LOC103484199 PE=4 SV=1	[more]

BLAST of Lcy05g013080 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022135937.1	5.3e-70	68.06	uncharacterized protein LOC111007768 [Momordica charantia]	[more]
XP_022135938.1	3.3e-64	59.91	probable serine/threonine-protein kinase samkC [Momordica charantia]	[more]
XP_038895979.1	4.3e-64	51.71	junction-mediating and -regulatory protein-like [Benincasa hispida]	[more]
KAG7011696.1	5.6e-64	66.29	hypothetical protein SDJN02_26602, partial [Cucurbita argyrosperma subsp. argyro...	[more]
KAG6572024.1	9.6e-64	66.29	hypothetical protein SDJN03_28752, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of Lcy05g013080 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G49330.1	2.0e-43	47.64	hydroxyproline-rich glycoprotein family protein	[more]
AT2G16190.1	5.5e-33	40.53	BEST Arabidopsis thaliana protein match is: hydroxyproline-rich glycoprotein fam...	[more]
AT2G16190.2	4.5e-19	36.71	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..54
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 17..34
None	No IPR available	PANTHER	PTHR34272	EXPRESSED PROTEIN	coord: 34..205

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy05g013080.1	Lcy05g013080.1	mRNA