Lcy05g012900 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy05g012900
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	protein FAR1-RELATED SEQUENCE 4-like
Location	Chr05: 15127330 .. 15129481 (-)
RNA-Seq Expression	Lcy05g012900
Synteny	Lcy05g012900

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTACATCTTATCCTTATTATTTAGGTCAAGAAATTCCATCAACATCGACCTATGTTCCACTTACATCGAATCCTAGTGTGCCACCATCACTTACCCCATTGTCCAGTAATGTGGTGACATACAACCTAGGGGATGATGCATACCCTGTTACTCATGAACATGCTGACGTTGATGGTGGGGTCCACGACTGGGAAGATGATGGATTGGATGCACACTATAATAGTGATGGTGGAGATGGTGGAGATGGTGAAGATGGAGAAGAAGAGATCAATGAAGTGGGTGACATGCAACAAGTGAGAATGAATGCTCCCACTACTGAAGTTCCACCACCTCAAGAACCACAGAACAATCCTCCACTTTTGACTGAAGCACCCCATGTGTCAGATCATTCTGGCAAGTCAATCATCATGTCAGGTCAGCCTTCCTCACAAGATATAGAAGTTGAGGATATTTTTTTTATCAAGAAAAGATTTATACATGAGATTGTCTGTTATAGCGATGAGAAACAATTTCGAGTTTAGGGTTAAAAAGTCGAACCCAAAACTTTTCACATGCAGATGTGTTATCAAGGAATGTAAATGGAGAGTGAGGGCTGTTTGTTTGAAGGGGTCTGATGCATTTAAAATTTCAAAGTATAGTAATGCTCATAACTGCAAGCATGAGATGTTGTCACACGATCATTGTAATACTAAAAGTTGGGTTATAGGGCGCTTAATTAAGTCAAGGTTTGAAGATGTTAGTCGTACGTATAAACCAAAAGATATTGTAAAAGATATGCGACAGGAGTATGGTGTGAGCTTGACTTATGACAAAGCTTGGCGGGCAAGAGAAGAAGCATTAGTTCTTGCTAGGGGGTCGCCAGAAGAATCTTATAAACTCTTGTCGAGGTTTGGTGAAGCATTAAAAATTGAAGAAAACCCTGGTACTGTGTTTGACTTGGAAGTTGAAGATGATCGATATTTCAAGCACGTATTTATGGCTTTAGGTCCTTCTATTAGGGGGTTTAGGTCATGCATTCGTCCAGTATTAATTGTAGATGCAACCCATTTGAGAGGGAAGTATAGTGGGAAACTCTTGCTTGCAACTGGTGTCGATGGAAACAACCAAATCTATTCGGTCGGGTTTGGGTTTGCCGATGGAGAATCAGATTCATCATGGACATATTTTTTTGAACAGATGAAACGAGCGATTGGGGAAGTTCGTAATCTTGTCATTGTGTCAGATCGACATCCAAGCATTCGTAAGGCAGTGAAGACCGTGTTACCCGATGCATTTCACTGTATATGCATACACCACCTTGGTAATAACCTTGTAACCCATTGTAAGAATGAAGACGTGAGACCTATTTACCTCCTTGCAGCGAAGGCATTTCGTAAATCAGAGTTTAATAGTTACTGGGATCAATTAGCGGGGTATCCAATTGCACGAAGATACTTAGAAGGTATTGGGATTGAACGGTGGGCTCGGGCATTCCAGGTTGGTAGGAGGTACAATCAGATGACCACAAATCTTGCCGAATCCATAAATGCATTATTATTGGATGCACGACAGCTTCCAATCACATCTTTCTTGAATCATATCAGAGGGTGGCTTCAAGAACTATACTACGCTCGTCGTACTGCAGCATCCGGTCGTGAAACACGACTATCAGATTATGCATCAGACCTTATTGCACAGGCAGAGGCGAAAGCGAGAAGGTATGTTGTTAGGCCGGTTGATAGGTATGAGTTCGAGGTTGATGATGGATACAAGGGTGGCCGTGTCAATATTCACAAAAAAACGTATACCTGTCGTGAATTTGATTACTACGAGCTCCCATGTTCGCATGCAATCGCAGCATGCATCTATCGAAACATAGACCCCTTTCCCCTTTGCTCTAAAGTCTATCACATGGAATCTGTGTTGATGGCCTACGCAGAACCCATATATCCTCTTGGGCATGATTCTGAGTGGAAGAGATCACCCAACTTTGTTGACATTGAAGTCCTACCACCGAAAAAGGTTGCTAGAGTTGGTCGACGTCAAACACTGCGAATTCCATCTACAGGTGAGGTTCAACAAGTCCACAAATGTAGCCGATGTGGAAGCGGGGTCATAATCGAAAGACTTGTCGTGAGCCACTTACTACCGTGTAATCCGTTTGTTTAA

mRNA sequence

ATGGCTACATCTTATCCTTATTATTTAGGTCAAGAAATTCCATCAACATCGACCTATGTTCCACTTACATCGAATCCTAGTGTGCCACCATCACTTACCCCATTGTCCAGTAATGTGGTGACATACAACCTAGGGGATGATGCATACCCTGTTACTCATGAACATGCTGACGTTGATGGTGGGGTCCACGACTGGGAAGATGATGGATTGGATGCACACTATAATAGTGATGGTGGAGATGGTGGAGATGGTGAAGATGGAGAAGAAGAGATCAATGAAGTGGGTGACATGCAACAAGTGAGAATGAATGCTCCCACTACTGAAGTTCCACCACCTCAAGAACCACAGAACAATCCTCCACTTTTGACTGAAGCACCCCATGTGTCAGATCATTCTGGCAATTACTGGGATCAATTAGCGGGGTATCCAATTGCACGAAGATACTTAGAAGGTATTGGGATTGAACGGTGGGCTCGGGCATTCCAGGTTGGTAGGAGGTACAATCAGATGACCACAAATCTTGCCGAATCCATAAATGCATTATTATTGGATGCACGACAGCTTCCAATCACATCTTTCTTGAATCATATCAGAGGGTGGCTTCAAGAACTATACTACGCTCGTCGTACTGCAGCATCCGGTCGTGAAACACGACTATCAGATTATGCATCAGACCTTATTGCACAGGCAGAGGCGAAAGCGAGAAGGTATGTTGTTAGGCCGGTTGATAGGTATGAGTTCGAGGTTGATGATGGATACAAGGGTGGCCGTGTCAATATTCACAAAAAAACGTATACCTGTCGTGAATTTGATTACTACGAGCTCCCATGTTCGCATGCAATCGCAGCATGCATCTATCGAAACATAGACCCCTTTCCCCTTTGCTCTAAAGTCTATCACATGGAATCTGTGTTGATGGCCTACGCAGAACCCATATATCCTCTTGGGCATGATTCTGAGTGGAAGAGATCACCCAACTTTGTTGACATTGAAGTCCTACCACCGAAAAAGGTTGCTAGAGTTGGTCGACGTCAAACACTGCGAATTCCATCTACAGGTGAGGTTCAACAAGTCCACAAATGTAGCCGATGTGGAAGCGGGGTCATAATCGAAAGACTTGTCGTGAGCCACTTACTACCGTGTAATCCGTTTGTTTAA

Coding sequence (CDS)

ATGGCTACATCTTATCCTTATTATTTAGGTCAAGAAATTCCATCAACATCGACCTATGTTCCACTTACATCGAATCCTAGTGTGCCACCATCACTTACCCCATTGTCCAGTAATGTGGTGACATACAACCTAGGGGATGATGCATACCCTGTTACTCATGAACATGCTGACGTTGATGGTGGGGTCCACGACTGGGAAGATGATGGATTGGATGCACACTATAATAGTGATGGTGGAGATGGTGGAGATGGTGAAGATGGAGAAGAAGAGATCAATGAAGTGGGTGACATGCAACAAGTGAGAATGAATGCTCCCACTACTGAAGTTCCACCACCTCAAGAACCACAGAACAATCCTCCACTTTTGACTGAAGCACCCCATGTGTCAGATCATTCTGGCAATTACTGGGATCAATTAGCGGGGTATCCAATTGCACGAAGATACTTAGAAGGTATTGGGATTGAACGGTGGGCTCGGGCATTCCAGGTTGGTAGGAGGTACAATCAGATGACCACAAATCTTGCCGAATCCATAAATGCATTATTATTGGATGCACGACAGCTTCCAATCACATCTTTCTTGAATCATATCAGAGGGTGGCTTCAAGAACTATACTACGCTCGTCGTACTGCAGCATCCGGTCGTGAAACACGACTATCAGATTATGCATCAGACCTTATTGCACAGGCAGAGGCGAAAGCGAGAAGGTATGTTGTTAGGCCGGTTGATAGGTATGAGTTCGAGGTTGATGATGGATACAAGGGTGGCCGTGTCAATATTCACAAAAAAACGTATACCTGTCGTGAATTTGATTACTACGAGCTCCCATGTTCGCATGCAATCGCAGCATGCATCTATCGAAACATAGACCCCTTTCCCCTTTGCTCTAAAGTCTATCACATGGAATCTGTGTTGATGGCCTACGCAGAACCCATATATCCTCTTGGGCATGATTCTGAGTGGAAGAGATCACCCAACTTTGTTGACATTGAAGTCCTACCACCGAAAAAGGTTGCTAGAGTTGGTCGACGTCAAACACTGCGAATTCCATCTACAGGTGAGGTTCAACAAGTCCACAAATGTAGCCGATGTGGAAGCGGGGTCATAATCGAAAGACTTGTCGTGAGCCACTTACTACCGTGTAATCCGTTTGTTTAA

Protein sequence

MATSYPYYLGQEIPSTSTYVPLTSNPSVPPSLTPLSSNVVTYNLGDDAYPVTHEHADVDGGVHDWEDDGLDAHYNSDGGDGGDGEDGEEEINEVGDMQQVRMNAPTTEVPPPQEPQNNPPLLTEAPHVSDHSGNYWDQLAGYPIARRYLEGIGIERWARAFQVGRRYNQMTTNLAESINALLLDARQLPITSFLNHIRGWLQELYYARRTAASGRETRLSDYASDLIAQAEAKARRYVVRPVDRYEFEVDDGYKGGRVNIHKKTYTCREFDYYELPCSHAIAACIYRNIDPFPLCSKVYHMESVLMAYAEPIYPLGHDSEWKRSPNFVDIEVLPPKKVARVGRRQTLRIPSTGEVQQVHKCSRCGSGVIIERLVVSHLLPCNPFV

Homology

[Close]

BLAST of Lcy05g012900 vs. ExPASy TrEMBL
Match: A0A6J1DQV1 (uncharacterized protein LOC111022299 OS=Momordica charantia OX=3673 GN=LOC111022299 PE=4 SV=1)

HSP 1 Score: 273.5 bits (698), Expect = 1.4e-69
Identity = 123/234 (52.56%), Postives = 170/234 (72.65%), Query Frame = 0


Query: 135 YWDQLAGYPIARRYLEGIGIERWARAFQVGRRYNQMTTNLAESINALLLDARQLPITSFL 194
           YW+QLAG+P  R+YLE +G ++W+RA+Q   RYNQ TTN+AES+NA+L+ AR LP+T+ L
Sbjct: 33  YWNQLAGFPELRQYLEELGFDKWSRAYQPRLRYNQTTTNIAESMNAVLVHARYLPVTTLL 92

Query: 195 NHIRGWLQELYYARRTAASGRETRLSDYASDLIAQAEAKARRYVVRPVDRYEFEVDDGYK 254
            H    LQ  YY +RT AS R + L+DY   ++  A  +AR++ +RP+D YE+EV DG  
Sbjct: 93  EHCGALLQRWYYEQRTYASTRASILTDYVEGIVKSAVEQARQHTIRPIDNYEYEVHDGNS 152

Query: 255 GGRVNIHKKTYTCREFDYYELPCSHAIAACIYRNIDPFPLCSKVYHMESVLMAYAEPIYP 314
             RVN++ K+ TC++FDYY++PCSHA+ A ++RN+  + LCS  Y +E++L  YAEPIYP
Sbjct: 153 KVRVNLNSKSCTCKQFDYYQIPCSHAVVATMHRNVSIYTLCSPKYKLETLLNTYAEPIYP 212

Query: 315 LGHDSEWKRSPNFVDIEVLPPKKVARVGRRQTLRIPSTGEVQQVHKCSRCGSGV 369
           LG + +W    +FV+  + PPK VARVGRRQT+RIPS GE QQ+HK SRCG  V
Sbjct: 213 LGDEEDWPLPDDFVEYTIEPPKFVARVGRRQTVRIPSAGEPQQIHKYSRCGMQV 266

[Close]

BLAST of Lcy05g012900 vs. ExPASy TrEMBL
Match: A0A6J1DK35 (uncharacterized protein LOC111021833 OS=Momordica charantia OX=3673 GN=LOC111021833 PE=4 SV=1)

HSP 1 Score: 272.7 bits (696), Expect = 2.3e-69
Identity = 128/231 (55.41%), Postives = 163/231 (70.56%), Query Frame = 0


Query: 136 WDQLAGYPIARRYLEGIGIERWARAFQVGRRYNQMTTNLAESINALLLDARQLPITSFLN 195
           W QL  YP  R YL+ IG ERWAR FQ   RY QMTTN+AES+NA    AR+LP+T+ L+
Sbjct: 79  WAQLRAYPGVREYLDDIGKERWARCFQTQLRYTQMTTNIAESVNAFFRHARKLPVTALLD 138

Query: 196 HIRGWLQELYYARRTAASGRETRLSDYASDLIAQAEAKARRYVVRPVDRYEFEVDDGYKG 255
           HIRG L   +Y RRT A+ R T LSDYA ++ A+    ARR+VV  +D++ F+V DG   
Sbjct: 139 HIRGKLHNWFYDRRTLAASRSTTLSDYAENMYAEYSDSARRHVVDNIDQFHFQVRDGNFD 198

Query: 256 GRVNIHKKTYTCREFDYYELPCSHAIAACIYRNIDPFPLCSKVYHMESVLMAYAEPIYPL 315
           G V+++  T +CREFDY+++PCSH IAA + RNI+P+ LC + Y   S ++AYAEPI+P+
Sbjct: 199 GIVDLNAMTCSCREFDYFKIPCSHVIAAAMMRNINPYSLCDEAYTTNSWILAYAEPIFPV 258

Query: 316 GHDSEWKRSPNFVDIEVLPPKKVARVGRRQTLRIPSTGEVQQVHKCSRCGS 367
           GH S W  SP FV+I V PPK V RVGRR T RIPSTGEV+Q  KC RCG+
Sbjct: 259 GHVSTWNSSPEFVNIPVEPPKTVPRVGRRNTTRIPSTGEVRQTRKCGRCGA 309

[Close]

BLAST of Lcy05g012900 vs. ExPASy TrEMBL
Match: A0A6J1CVL4 (uncharacterized protein LOC111015181 OS=Momordica charantia OX=3673 GN=LOC111015181 PE=4 SV=1)

HSP 1 Score: 272.3 bits (695), Expect = 3.1e-69
Identity = 128/231 (55.41%), Postives = 162/231 (70.13%), Query Frame = 0


Query: 136 WDQLAGYPIARRYLEGIGIERWARAFQVGRRYNQMTTNLAESINALLLDARQLPITSFLN 195
           W QL  YP  R YL+ IG ERWAR FQ   RY QMTTN+AES+N L   AR+LP+T+ L+
Sbjct: 286 WAQLRAYPGVREYLDDIGKERWARCFQTQLRYTQMTTNIAESVNTLFRHARKLPVTALLD 345

Query: 196 HIRGWLQELYYARRTAASGRETRLSDYASDLIAQAEAKARRYVVRPVDRYEFEVDDGYKG 255
           HIRG LQ  +Y RRT A+ R T LSDYA ++ A+     RR+VV  +D++ F+V D    
Sbjct: 346 HIRGKLQNWFYDRRTLAASRSTTLSDYAENMYAEYSNSVRRHVVDNIDQFHFQVQDDNLD 405

Query: 256 GRVNIHKKTYTCREFDYYELPCSHAIAACIYRNIDPFPLCSKVYHMESVLMAYAEPIYPL 315
           G V+++  T  CREFDY+++PCSHAIAA   RNI+P+ LC + Y   S ++AYAEPI+P+
Sbjct: 406 GIVDLNAMTCNCREFDYFKIPCSHAIAAATMRNINPYSLCDEAYTTNSWILAYAEPIFPV 465

Query: 316 GHDSEWKRSPNFVDIEVLPPKKVARVGRRQTLRIPSTGEVQQVHKCSRCGS 367
           GH S W  SP FV+I V PPK V RVGRR+T RIPSTGEV+Q  KC RCG+
Sbjct: 466 GHVSTWNSSPEFVNIPVEPPKTVPRVGRRKTTRIPSTGEVRQTRKCGRCGA 516

[Close]

BLAST of Lcy05g012900 vs. ExPASy TrEMBL
Match: A0A6J1DLB0 (uncharacterized protein LOC111021969 OS=Momordica charantia OX=3673 GN=LOC111021969 PE=4 SV=1)

HSP 1 Score: 270.0 bits (689), Expect = 1.5e-68
Identity = 124/232 (53.45%), Postives = 167/232 (71.98%), Query Frame = 0


Query: 135 YWDQLAGYPIARRYLEGIGIERWARAFQVGRRYNQMTTNLAESINALLLDARQLPITSFL 194
           YW QLAG+P   +YLE IG+++WAR +Q G RYNQMT+NLAES+NA+L+ AR LPIT+  
Sbjct: 595 YWGQLAGFPGVHKYLEDIGLDKWARTYQPGMRYNQMTSNLAESMNAVLVHARDLPITALF 654

Query: 195 NHIRGWLQELYYARRTAASGRETRLSDYASDLIAQAEAKARRYVVRPVDRYEFEVDDGYK 254
            + R  LQ+ +Y RRTA S R T L++YA +++ +   +AR + VRP+DR+EFEV DG  
Sbjct: 655 ENCRSLLQQWFYDRRTAGSSRGTFLTEYAENILKEVAEQARYHHVRPIDRFEFEVHDGAT 714

Query: 255 GGRVNIHKKTYTCREFDYYELPCSHAIAACIYRNIDPFPLCSKVYHMESVLMAYAEPIYP 314
             RVNI+ KT TC++F YYE+PCSHAIA  + RNI    LCS  Y +++++ AY EP+YP
Sbjct: 715 KVRVNINSKTCTCKQFYYYEIPCSHAIAGAVLRNISVHTLCSDRYRIDTLIQAYVEPVYP 774

Query: 315 LGHDSEWKRSPNFVDIEVLPPKKVARVGRRQTLRIPSTGEVQQVHKCSRCGS 367
           LG + +W    ++V   + PP+ V RVGR QT RIPS GEV+QVHKC RCG+
Sbjct: 775 LGDEEDWILPYDYVPTTIQPPRFVPRVGRCQTARIPSVGEVRQVHKCGRCGN 826

[Close]

BLAST of Lcy05g012900 vs. ExPASy TrEMBL
Match: A0A6J1D4G8 (uncharacterized protein LOC111016889 OS=Momordica charantia OX=3673 GN=LOC111016889 PE=4 SV=1)

HSP 1 Score: 266.2 bits (679), Expect = 2.2e-67
Identity = 127/231 (54.98%), Postives = 163/231 (70.56%), Query Frame = 0


Query: 136 WDQLAGYPIARRYLEGIGIERWARAFQVGRRYNQMTTNLAESINALLLDARQLPITSFLN 195
           W QL  YP AR YL+ IG ERWA  FQ   RY QMT+N AES+NAL    R+LP+T+ L+
Sbjct: 79  WAQLGAYPGAREYLDDIGKERWAHCFQTELRYTQMTSNNAESVNALFRHTRRLPVTALLD 138

Query: 196 HIRGWLQELYYARRTAASGRETRLSDYASDLIAQAEAKARRYVVRPVDRYEFEVDDGYKG 255
           HIRG LQ  +Y RRT AS R T LSDYA + +A+    ARR+VV  +D++  +V DG   
Sbjct: 139 HIRGLLQTWFYDRRTLASSRSTTLSDYAENKLAEYWDNARRHVVVNIDQFHVQVRDGNLD 198

Query: 256 GRVNIHKKTYTCREFDYYELPCSHAIAACIYRNIDPFPLCSKVYHMESVLMAYAEPIYPL 315
           G V+ + +T +CREFDY+++PCSHAIA  + RNI+P+ LC + Y   S +MAYAEPI+P+
Sbjct: 199 GIVDFNSRTCSCREFDYFKIPCSHAIAGAMMRNINPYILCDEAYTTNSWVMAYAEPIFPI 258

Query: 316 GHDSEWKRSPNFVDIEVLPPKKVARVGRRQTLRIPSTGEVQQVHKCSRCGS 367
           GH S WK SP+FVD  V  P  V RVGRR+T+RIPSTGEV++  KC RCG+
Sbjct: 259 GHVSTWKSSPDFVDTPVEAPDMVPRVGRRRTVRIPSTGEVRETRKCGRCGT 309

[Close]

BLAST of Lcy05g012900 vs. NCBI nr
Match: XP_022155156.1 (uncharacterized protein LOC111022299 [Momordica charantia])

HSP 1 Score: 273.5 bits (698), Expect = 2.8e-69
Identity = 123/234 (52.56%), Postives = 170/234 (72.65%), Query Frame = 0


Query: 135 YWDQLAGYPIARRYLEGIGIERWARAFQVGRRYNQMTTNLAESINALLLDARQLPITSFL 194
           YW+QLAG+P  R+YLE +G ++W+RA+Q   RYNQ TTN+AES+NA+L+ AR LP+T+ L
Sbjct: 33  YWNQLAGFPELRQYLEELGFDKWSRAYQPRLRYNQTTTNIAESMNAVLVHARYLPVTTLL 92

Query: 195 NHIRGWLQELYYARRTAASGRETRLSDYASDLIAQAEAKARRYVVRPVDRYEFEVDDGYK 254
            H    LQ  YY +RT AS R + L+DY   ++  A  +AR++ +RP+D YE+EV DG  
Sbjct: 93  EHCGALLQRWYYEQRTYASTRASILTDYVEGIVKSAVEQARQHTIRPIDNYEYEVHDGNS 152

Query: 255 GGRVNIHKKTYTCREFDYYELPCSHAIAACIYRNIDPFPLCSKVYHMESVLMAYAEPIYP 314
             RVN++ K+ TC++FDYY++PCSHA+ A ++RN+  + LCS  Y +E++L  YAEPIYP
Sbjct: 153 KVRVNLNSKSCTCKQFDYYQIPCSHAVVATMHRNVSIYTLCSPKYKLETLLNTYAEPIYP 212

Query: 315 LGHDSEWKRSPNFVDIEVLPPKKVARVGRRQTLRIPSTGEVQQVHKCSRCGSGV 369
           LG + +W    +FV+  + PPK VARVGRRQT+RIPS GE QQ+HK SRCG  V
Sbjct: 213 LGDEEDWPLPDDFVEYTIEPPKFVARVGRRQTVRIPSAGEPQQIHKYSRCGMQV 266

[Close]

BLAST of Lcy05g012900 vs. NCBI nr
Match: XP_022154610.1 (uncharacterized protein LOC111021833 [Momordica charantia])

HSP 1 Score: 272.7 bits (696), Expect = 4.8e-69
Identity = 128/231 (55.41%), Postives = 163/231 (70.56%), Query Frame = 0


Query: 136 WDQLAGYPIARRYLEGIGIERWARAFQVGRRYNQMTTNLAESINALLLDARQLPITSFLN 195
           W QL  YP  R YL+ IG ERWAR FQ   RY QMTTN+AES+NA    AR+LP+T+ L+
Sbjct: 79  WAQLRAYPGVREYLDDIGKERWARCFQTQLRYTQMTTNIAESVNAFFRHARKLPVTALLD 138

Query: 196 HIRGWLQELYYARRTAASGRETRLSDYASDLIAQAEAKARRYVVRPVDRYEFEVDDGYKG 255
           HIRG L   +Y RRT A+ R T LSDYA ++ A+    ARR+VV  +D++ F+V DG   
Sbjct: 139 HIRGKLHNWFYDRRTLAASRSTTLSDYAENMYAEYSDSARRHVVDNIDQFHFQVRDGNFD 198

Query: 256 GRVNIHKKTYTCREFDYYELPCSHAIAACIYRNIDPFPLCSKVYHMESVLMAYAEPIYPL 315
           G V+++  T +CREFDY+++PCSH IAA + RNI+P+ LC + Y   S ++AYAEPI+P+
Sbjct: 199 GIVDLNAMTCSCREFDYFKIPCSHVIAAAMMRNINPYSLCDEAYTTNSWILAYAEPIFPV 258

Query: 316 GHDSEWKRSPNFVDIEVLPPKKVARVGRRQTLRIPSTGEVQQVHKCSRCGS 367
           GH S W  SP FV+I V PPK V RVGRR T RIPSTGEV+Q  KC RCG+
Sbjct: 259 GHVSTWNSSPEFVNIPVEPPKTVPRVGRRNTTRIPSTGEVRQTRKCGRCGA 309

[Close]

BLAST of Lcy05g012900 vs. NCBI nr
Match: XP_022145820.1 (uncharacterized protein LOC111015181 [Momordica charantia])

HSP 1 Score: 272.3 bits (695), Expect = 6.3e-69
Identity = 128/231 (55.41%), Postives = 162/231 (70.13%), Query Frame = 0


Query: 136 WDQLAGYPIARRYLEGIGIERWARAFQVGRRYNQMTTNLAESINALLLDARQLPITSFLN 195
           W QL  YP  R YL+ IG ERWAR FQ   RY QMTTN+AES+N L   AR+LP+T+ L+
Sbjct: 286 WAQLRAYPGVREYLDDIGKERWARCFQTQLRYTQMTTNIAESVNTLFRHARKLPVTALLD 345

Query: 196 HIRGWLQELYYARRTAASGRETRLSDYASDLIAQAEAKARRYVVRPVDRYEFEVDDGYKG 255
           HIRG LQ  +Y RRT A+ R T LSDYA ++ A+     RR+VV  +D++ F+V D    
Sbjct: 346 HIRGKLQNWFYDRRTLAASRSTTLSDYAENMYAEYSNSVRRHVVDNIDQFHFQVQDDNLD 405

Query: 256 GRVNIHKKTYTCREFDYYELPCSHAIAACIYRNIDPFPLCSKVYHMESVLMAYAEPIYPL 315
           G V+++  T  CREFDY+++PCSHAIAA   RNI+P+ LC + Y   S ++AYAEPI+P+
Sbjct: 406 GIVDLNAMTCNCREFDYFKIPCSHAIAAATMRNINPYSLCDEAYTTNSWILAYAEPIFPV 465

Query: 316 GHDSEWKRSPNFVDIEVLPPKKVARVGRRQTLRIPSTGEVQQVHKCSRCGS 367
           GH S W  SP FV+I V PPK V RVGRR+T RIPSTGEV+Q  KC RCG+
Sbjct: 466 GHVSTWNSSPEFVNIPVEPPKTVPRVGRRKTTRIPSTGEVRQTRKCGRCGA 516

[Close]

BLAST of Lcy05g012900 vs. NCBI nr
Match: XP_022154803.1 (uncharacterized protein LOC111021969 [Momordica charantia])

HSP 1 Score: 270.0 bits (689), Expect = 3.1e-68
Identity = 124/232 (53.45%), Postives = 167/232 (71.98%), Query Frame = 0


Query: 135 YWDQLAGYPIARRYLEGIGIERWARAFQVGRRYNQMTTNLAESINALLLDARQLPITSFL 194
           YW QLAG+P   +YLE IG+++WAR +Q G RYNQMT+NLAES+NA+L+ AR LPIT+  
Sbjct: 595 YWGQLAGFPGVHKYLEDIGLDKWARTYQPGMRYNQMTSNLAESMNAVLVHARDLPITALF 654

Query: 195 NHIRGWLQELYYARRTAASGRETRLSDYASDLIAQAEAKARRYVVRPVDRYEFEVDDGYK 254
            + R  LQ+ +Y RRTA S R T L++YA +++ +   +AR + VRP+DR+EFEV DG  
Sbjct: 655 ENCRSLLQQWFYDRRTAGSSRGTFLTEYAENILKEVAEQARYHHVRPIDRFEFEVHDGAT 714

Query: 255 GGRVNIHKKTYTCREFDYYELPCSHAIAACIYRNIDPFPLCSKVYHMESVLMAYAEPIYP 314
             RVNI+ KT TC++F YYE+PCSHAIA  + RNI    LCS  Y +++++ AY EP+YP
Sbjct: 715 KVRVNINSKTCTCKQFYYYEIPCSHAIAGAVLRNISVHTLCSDRYRIDTLIQAYVEPVYP 774

Query: 315 LGHDSEWKRSPNFVDIEVLPPKKVARVGRRQTLRIPSTGEVQQVHKCSRCGS 367
           LG + +W    ++V   + PP+ V RVGR QT RIPS GEV+QVHKC RCG+
Sbjct: 775 LGDEEDWILPYDYVPTTIQPPRFVPRVGRCQTARIPSVGEVRQVHKCGRCGN 826

[Close]

BLAST of Lcy05g012900 vs. NCBI nr
Match: XP_022146373.1 (uncharacterized protein LOC111015601 [Momordica charantia])

HSP 1 Score: 266.2 bits (679), Expect = 4.5e-67
Identity = 126/231 (54.55%), Postives = 161/231 (69.70%), Query Frame = 0


Query: 136 WDQLAGYPIARRYLEGIGIERWARAFQVGRRYNQMTTNLAESINALLLDARQLPITSFLN 195
           W QL  YP  R YL+ IG ERWAR FQ   RY  MTTN+ ES+NAL   AR+LP+T+ L+
Sbjct: 209 WAQLRAYPGVREYLDDIGKERWARCFQTQLRYTHMTTNITESVNALFKHARKLPVTALLD 268

Query: 196 HIRGWLQELYYARRTAASGRETRLSDYASDLIAQAEAKARRYVVRPVDRYEFEVDDGYKG 255
           HI G LQ  +Y RRT A+ R T LSDYA ++ A+    ARR+VV  +D++ F+V D    
Sbjct: 269 HIIGKLQNWFYDRRTLAASRSTTLSDYAENMYAEYSDSARRHVVDNIDQFHFQVRDDNLD 328

Query: 256 GRVNIHKKTYTCREFDYYELPCSHAIAACIYRNIDPFPLCSKVYHMESVLMAYAEPIYPL 315
           G V+++  T +CREFDY+++PCSHAIAA   RNI+P+ LC + Y     ++AYAEPI+P+
Sbjct: 329 GIVDLNAMTCSCREFDYFKIPCSHAIAAATMRNINPYSLCDEAYTTNFWILAYAEPIFPV 388

Query: 316 GHDSEWKRSPNFVDIEVLPPKKVARVGRRQTLRIPSTGEVQQVHKCSRCGS 367
           GH S W  SP FV+I V PPK V RVGRR+T RIPSTGEV+Q  KC RCG+
Sbjct: 389 GHVSTWNSSPEFVNIPVEPPKTVPRVGRRKTTRIPSTGEVRQTRKCGRCGA 439

[Close]

BLAST of Lcy05g012900 vs. TAIR 10
Match: AT1G64255.1 (MuDR family transposase )

HSP 1 Score: 57.0 bits (136), Expect = 3.9e-08
Identity = 48/207 (23.19%), Postives = 81/207 (39.13%), Query Frame = 0


Query: 143 PIARRYLEGIGIERWARAFQVGRRYNQMTTN---LAESINALLLDARQL--PITSFLNHI 202
           P AR++L+     RWA A   GRRY  M  N   L    NA       +   +    + +
Sbjct: 522 PEARKWLDQFPQNRWALAHDNGRRYGIMEINTKALFAVCNAFEQAGHVVTGSVLLLFDEL 581

Query: 203 RGWLQELYYARRTAASGRET-------RLSDYASDLIAQAEAKARRYVVRPVDRYEFEVD 262
           R    + +   R++ +  +        +L ++ +  +  +      Y+V P+D   F+V 
Sbjct: 582 RSKFDKSFSCSRSSLNCGDVYTEPVMDKLEEFRTTFVTYS------YIVTPLDNNAFQVA 641

Query: 263 DGYKGGR--VNIHKKTYTCREFDYYELPCSHAIAACIYRNIDPFPLCSKVYHMESVLMAY 322
                G   V +   + TC +F  Y+ PC HA+A C     +P       Y +E +   Y
Sbjct: 642 TALDKGECIVQLSDCSCTCGDFQRYKFPCLHALAVCKKLKFNPLQYVDDCYTLERLKRTY 701

Query: 323 AEPIYPLGHDSEWKRSPNFVDIEVLPP 336
           A     +   S W  +       +LPP
Sbjct: 702 ATIFSHVPEMSAWPEASGVP--RLLPP 720

[Close]

BLAST of Lcy05g012900 vs. TAIR 10
Match: AT1G64260.1 (MuDR family transposase )

HSP 1 Score: 49.3 bits (116), Expect = 8.1e-06
Identity = 43/191 (22.51%), Postives = 78/191 (40.84%), Query Frame = 0


Query: 143 PIARRYLEGIGIERWARAFQVGRRYNQMTTNLAESINALLLDARQLPITSFLNHIRGWLQ 202
           P A ++L+ I   +WA A   G RY  +  +      AL    R  P  +    + G + 
Sbjct: 515 PEAWKWLDQIPRHKWALAHDSGLRYGIIEIDR----EALFAVCRGFPYCTVA--MTGGVM 574

Query: 203 ELYYARRT----------AASGRETRLSDYASDLIAQAEAKARRYVVRPVDRYEFEVDDG 262
            ++   R+          ++  R    ++   D + +    +  YV+  ++R  F+V + 
Sbjct: 575 LMFDELRSSFDKSLSSIYSSLNRGVVYTEPFMDKLEEFMTDSIPYVITQLERDSFKVSES 634

Query: 263 YKGGR--VNIHKKTYTCREFDYYELPCSHAIAACIYRNIDPFPLCSKVYHMESVLMAYAE 322
            +     V ++  T TCR+F  Y+ PC HA+A      I+P     + Y +E     YA 
Sbjct: 635 SEKEEWIVQLNVSTCTCRKFQSYKFPCLHALAVFEKLKINPLQYVDECYTVEQYCKTYAA 694

The following BLAST results are available for this feature:

BLAST of Lcy05g012900 vs.


Match Name	E-value	Identity	Description

BLAST of Lcy05g012900 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DQV1	1.4e-69	52.56	uncharacterized protein LOC111022299 OS=Momordica charantia OX=3673 GN=LOC111022...	[more]
A0A6J1DK35	2.3e-69	55.41	uncharacterized protein LOC111021833 OS=Momordica charantia OX=3673 GN=LOC111021...	[more]
A0A6J1CVL4	3.1e-69	55.41	uncharacterized protein LOC111015181 OS=Momordica charantia OX=3673 GN=LOC111015...	[more]
A0A6J1DLB0	1.5e-68	53.45	uncharacterized protein LOC111021969 OS=Momordica charantia OX=3673 GN=LOC111021...	[more]
A0A6J1D4G8	2.2e-67	54.98	uncharacterized protein LOC111016889 OS=Momordica charantia OX=3673 GN=LOC111016...	[more]

BLAST of Lcy05g012900 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022155156.1	2.8e-69	52.56	uncharacterized protein LOC111022299 [Momordica charantia]	[more]
XP_022154610.1	4.8e-69	55.41	uncharacterized protein LOC111021833 [Momordica charantia]	[more]
XP_022145820.1	6.3e-69	55.41	uncharacterized protein LOC111015181 [Momordica charantia]	[more]
XP_022154803.1	3.1e-68	53.45	uncharacterized protein LOC111021969 [Momordica charantia]	[more]
XP_022146373.1	4.5e-67	54.55	uncharacterized protein LOC111015601 [Momordica charantia]	[more]

BLAST of Lcy05g012900 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G64255.1	3.9e-08	23.19	MuDR family transposase	[more]
AT1G64260.1	8.1e-06	22.51	MuDR family transposase	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006564	Zinc finger, PMZ-type	SMART	SM00575	26again6	coord: 263..290 e-value: 5.9E-7 score: 39.1
IPR007527	Zinc finger, SWIM-type	PFAM	PF04434	SWIM	coord: 266..287 e-value: 2.1E-5 score: 24.1
IPR007527	Zinc finger, SWIM-type	PROSITE	PS50966	ZF_SWIM	coord: 247..288 score: 8.011223
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 104..129
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 68..89
None	No IPR available	PANTHER	PTHR31973:SF152	SUBFAMILY NOT NAMED	coord: 155..366
None	No IPR available	PANTHER	PTHR31973	POLYPROTEIN, PUTATIVE-RELATED	coord: 155..366

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy05g012900.1	Lcy05g012900.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009987	cellular process
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008270	zinc ion binding